Metagenome / Metatranscriptome Family F068050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068050
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	100 residues
Representative Sequence	SLLATAGTAWPVSPTQGAAGTPATNINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAG
Number of Associated Samples	99
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.50 %
% of genes near scaffold ends (potentially truncated)	92.80 %
% of genes from short scaffolds (< 2000 bps)	92.80 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.800 % of family members)
Environment Ontology (ENVO)	Unclassified (29.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.93% β-sheet: 0.00% Coil/Unstructured: 52.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04392	ABC_sub_bind	4.80
PF01068	DNA_ligase_A_M	4.00
PF03466	LysR_substrate	4.00
PF03401	TctC	2.40
PF04226	Transgly_assoc	2.40
PF00536	SAM_1	2.40
PF13340	DUF4096	0.80
PF01063	Aminotran_4	0.80
PF07045	DUF1330	0.80
PF04909	Amidohydro_2	0.80
PF02586	SRAP	0.80
PF00144	Beta-lactamase	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.80
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	4.00
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	4.00
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.40
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.40
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.60
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.80
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.60 %
Unclassified	root	N/A	7.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.00 %
Unclassified	root	N/A	7.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	80.80 %
Unclassified	root	N/A	7.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	80.80 %
Unclassified	root	N/A	7.20 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.80 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	80.80 %
Unclassified	root	N/A	7.20 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	80.80 %
Unclassified	root	N/A	7.20 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	80.80 %
Unclassified	root	N/A	7.20 %
Streptomyces venezuelae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces venezuelae	0.80 %
Methylocapsa acidiphila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10028603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1510	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10047542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10141814	Not Available	580	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1018576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1318	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10033949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1188	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10122888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300001867\|JGI12627J18819_10317543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300005332\|Ga0066388_102150567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300005332\|Ga0066388_102622109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300005332\|Ga0066388_102749183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300005363\|Ga0008090_10008057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces venezuelae	528	Open in IMG/M
3300005434\|Ga0070709_10030386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3242	Open in IMG/M
3300005435\|Ga0070714_100115795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2379	Open in IMG/M
3300005439\|Ga0070711_100768139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300005457\|Ga0070662_100784661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300005555\|Ga0066692_10450503	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005764\|Ga0066903_100810587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1676	Open in IMG/M
3300005764\|Ga0066903_108203362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa acidiphila	534	Open in IMG/M
3300005843\|Ga0068860_102154373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300006028\|Ga0070717_10664151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300006051\|Ga0075364_10739417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300006173\|Ga0070716_100755507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300006791\|Ga0066653_10739188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300006800\|Ga0066660_10575728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300006846\|Ga0075430_101713269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300006852\|Ga0075433_10712327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300006904\|Ga0075424_100834212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	983	Open in IMG/M
3300009137\|Ga0066709_103365628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300009137\|Ga0066709_104689717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300009147\|Ga0114129_11542877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300009147\|Ga0114129_13214051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300009156\|Ga0111538_11012380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300009162\|Ga0075423_10293951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1702	Open in IMG/M
3300010047\|Ga0126382_10665476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300010048\|Ga0126373_13238668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010329\|Ga0134111_10298007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300010358\|Ga0126370_10123934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1837	Open in IMG/M
3300010358\|Ga0126370_11164110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300010360\|Ga0126372_12113951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300010360\|Ga0126372_12605301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300010361\|Ga0126378_10301634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1705	Open in IMG/M
3300010361\|Ga0126378_12026526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300010366\|Ga0126379_13242016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300010371\|Ga0134125_11264122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300010375\|Ga0105239_11664949	Not Available	738	Open in IMG/M
3300010376\|Ga0126381_102624116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	721	Open in IMG/M
3300010398\|Ga0126383_10643452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1135	Open in IMG/M
3300010398\|Ga0126383_11856440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300010398\|Ga0126383_12321536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300012200\|Ga0137382_10458733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300012205\|Ga0137362_11129167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300012209\|Ga0137379_10303710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1506	Open in IMG/M
3300012210\|Ga0137378_10666777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300012211\|Ga0137377_10677446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300012285\|Ga0137370_10598330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300012361\|Ga0137360_10679245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300012582\|Ga0137358_10275718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1143	Open in IMG/M
3300012957\|Ga0164303_11347631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300012971\|Ga0126369_10205766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1902	Open in IMG/M
3300013306\|Ga0163162_12832492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300014157\|Ga0134078_10658722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300015374\|Ga0132255_103419689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300016270\|Ga0182036_10623919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300016319\|Ga0182033_10105278	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300016319\|Ga0182033_10482522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300016371\|Ga0182034_10488260	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300016387\|Ga0182040_11049770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300018468\|Ga0066662_10275396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1395	Open in IMG/M
3300018482\|Ga0066669_10330319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1255	Open in IMG/M
3300021168\|Ga0210406_11003417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300021170\|Ga0210400_11591951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300021377\|Ga0213874_10222856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300021475\|Ga0210392_10408986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	990	Open in IMG/M
3300021560\|Ga0126371_10476297	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300021560\|Ga0126371_11018921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300021560\|Ga0126371_12704409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300025915\|Ga0207693_10682691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300025928\|Ga0207700_10284986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1422	Open in IMG/M
3300025937\|Ga0207669_11946570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300025939\|Ga0207665_10273949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1254	Open in IMG/M
3300025939\|Ga0207665_10592964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300026320\|Ga0209131_1286056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300026523\|Ga0209808_1300170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300026557\|Ga0179587_10474908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300027371\|Ga0209418_1050311	Not Available	740	Open in IMG/M
3300028713\|Ga0307303_10061581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300028755\|Ga0307316_10355394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300028799\|Ga0307284_10331668	Not Available	614	Open in IMG/M
3300031231\|Ga0170824_125393228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031561\|Ga0318528_10192220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1091	Open in IMG/M
3300031564\|Ga0318573_10195126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300031680\|Ga0318574_10886631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031681\|Ga0318572_10197735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1173	Open in IMG/M
3300031764\|Ga0318535_10554886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031780\|Ga0318508_1234698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031793\|Ga0318548_10279446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300031795\|Ga0318557_10151552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300031796\|Ga0318576_10174236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1008	Open in IMG/M
3300031846\|Ga0318512_10171611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300031879\|Ga0306919_10782881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300031890\|Ga0306925_10780021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300031890\|Ga0306925_11108326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300031890\|Ga0306925_11733437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300031910\|Ga0306923_11316199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300031910\|Ga0306923_11727980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300031910\|Ga0306923_11816480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031912\|Ga0306921_10048211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4829	Open in IMG/M
3300031912\|Ga0306921_10837376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300031912\|Ga0306921_10921928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	991	Open in IMG/M
3300031942\|Ga0310916_10362089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1232	Open in IMG/M
3300031946\|Ga0310910_10162833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1714	Open in IMG/M
3300031947\|Ga0310909_10233974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1532	Open in IMG/M
3300032001\|Ga0306922_11138940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300032001\|Ga0306922_12125246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300032035\|Ga0310911_10286719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300032065\|Ga0318513_10261348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300032076\|Ga0306924_10962055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300032090\|Ga0318518_10182806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300032261\|Ga0306920_102782612	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300033289\|Ga0310914_11676556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.20%
Host-Associated	Host-Associated	12.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.20%
Plants	Host-Associated → Plants	12.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Roots	Host-Associated → Plants → Roots	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.60%
Loam	Environmental → Terrestrial → Soil → Loam	13.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100286031	3300000597	Forest Soil	SVLATAGTAWPVSPINEGAADTPAAASINTADAASNAVQLVDPNEVNELDRAAGVESSWLDYLWWMLGAALIAAFSMLVFSRTGSLFGRRTANVG*
AF_2010_repII_A1DRAFT_100475421	3300000597	Forest Soil	GSLLATAGTAWPVSPTTEGAAGTPATNINTADAASNAVQVVDPNEVNEIDRAASVESSWVNYLLWMLGAALAAAFAMWFLSRMRFLFGRRIANPG*
AF_2010_repII_A1DRAFT_101418142	3300000597	Forest Soil	PVSPIYEGAADTPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGTALVAVFSMLVFSRMRFFFGRRPQMRLSRLFSAKRT*
AF_2010_repII_A100DRAFT_10185762	3300000655	Forest Soil	AGTAWPVSPINEGAADTPAAASINTADAASNAVQLVDPNEVNELDRAAGVESSWLDYLWWMLGAALIAAFSMLVFSRTGSLFGRRTANVG*
AF_2010_repII_A001DRAFT_100339492	3300000793	Forest Soil	VSPINEGAADTPAAASINTADAASNAVQLVDPNEVNELDRAAGVESSWLDYLWWMLGAALIAAFSMLVFSRTGSLFGRRTANVG*
AF_2010_repII_A001DRAFT_101228881	3300000793	Forest Soil	VSPTNEGAAGTPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAANAG*
AP72_2010_repI_A100DRAFT_10649631	3300000837	Forest Soil	RDREAPRTTASAKVSKPAVREQAPSPRADEQPFNGESQGGSLLSTAGTAWPVSAINEGAADTHTADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAALAAAFAMWFFSRMRSLFGRRTANAAEPLM*
JGI12627J18819_103175432	3300001867	Forest Soil	PVSPSTEGAADTRAATSINTADAASNAVQMVDPNQVNELDREASVEPSWVNYLLWTLGAALAAGFALWLCSRMGFLFARRSANAG*
Ga0066388_1021505673	3300005332	Tropical Forest Soil	GAANMPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAANAG*
Ga0066388_1026221091	3300005332	Tropical Forest Soil	AAWPIIPNTEGTGAGGAAADTTEAANANAVQLVDPNEVNEIDRAASVESSWVNYLLWTLGAALAAAFAMWFFSRMRFLFDRRTANAG*
Ga0066388_1027491831	3300005332	Tropical Forest Soil	PLNDESRGGSLVATAGTAWPVSPTTQDAARTPGTSINTADAASNAVQMVDPNEINEIDRAASVESSWLSYLLWALGAALTAAFAMWFFPRLRFSIR*
Ga0066388_1078664991	3300005332	Tropical Forest Soil	KPAVPEQAPDAVSQKVPQAAPAAVASPRVDEQPLNDESWGGSLLATAGTAWPVSPMSDGAAGTPAARSIDTADAASNAVQLVDPNEVNELDRAASVESSWLDYLWWMLGAALVAAFSMWLFSRMRFLFGRRTINAS*
Ga0008090_100080571	3300005363	Tropical Rainforest Soil	AKVSKPAVRERAPSPRADEQPLNGESQGGSLLSTAGTAWPVSPINEGAADTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAALTAAFAMWFFSRMRSLSHL*
Ga0070709_100303865	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	KPAASREQAPDAVSQKPPQAAPAVVASPRVDEQARDDESRGGSLLTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0070714_1001157951	3300005435	Agricultural Soil	GKPAASREQAPDAVSQKPPQAAPAVVASPRVDEQARDDESRGGSLLTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0070711_1007681391	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EQAPDAVSQKPPQAAPAVVASPRADEQALNDESRGGSLLTTAGAAWPVSSVTDGAADTPSATSIASNAVQMVDPNEVNELDHEASVESSWVNYLLWMLGAALAAAFALWLFSRMAFLFGRRTANAG*
Ga0070662_1007846611	3300005457	Corn Rhizosphere	PRVDEQARDDESRGGSLLTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0066692_104505033	3300005555	Soil	AAVASPRADEQPLNDESGGGSLLATAGTAWPVSPITEGAAGTPATNINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWTLAAALAVAFAMWFFSRMRFLFGRRTANAA*
Ga0066903_1008105873	3300005764	Tropical Forest Soil	AAAAAPRADEQPLHDEGLGGSLVATAGTAWPVSPTTQDAAGTPGTNINTADAASNAVQIVDPNEINEIDRAASFESSWLNYLLWALGAALTAAFAMWFFLRMRFMFSRRTANVD*
Ga0066903_1082033621	3300005764	Tropical Forest Soil	AGTALPVSPITEGAADAPAATSISTADAASNAVQLVDPNEVNELDRAASVESSWFNYLLWMLGAAFAVAFAVWFFSRMRSLLGRRTANAG*
Ga0068860_1021543732	3300005843	Switchgrass Rhizosphere	GAADTPSATSIASNAVQMVDPNEVNELDHEASVESSWVNYLLWMLGAALAAAFALWLFSRMAFLFGRRTANAG*
Ga0070717_106641512	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DAVSQKPPQAAPAVVASPRADEQALNDESRGGSLLTTAGAAWPVSPVTEGAADTPAATSTAPNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG*
Ga0075364_107394172	3300006051	Populus Endosphere	DAVTQKSPEAAPAVIVSPSTNEQALNDESRSGSLLATAGTTWPVSPKTEDAADTWVATSINIADAASNAVQMVDANEVNELDREATVESSWINYLLWTLGAALTAGFAGFALWFCSRMGFRFARRSANAG*
Ga0070716_1007555071	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GGSLLTTAGAAWPVSPVTEGAADTPAATSTAPNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFARRTANAG*
Ga0066653_107391881	3300006791	Soil	RADEQPLNDESRGGSLLATAGTAWPVSPIAEGNAGTPAATSINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWVFSKMRFLFGRRTANAS*
Ga0066660_105757282	3300006800	Soil	TARTAWPVSPTTQDAAGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANAD*
Ga0075430_1017132691	3300006846	Populus Rhizosphere	ADEQPLNDESRGGSLLATAGTAWPVSPVTEGAAGTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWMLGAALVAAFAMWVFSRIRFLFGRRTANAG*
Ga0075433_107123271	3300006852	Populus Rhizosphere	RGGSLLATAGTSWPVSSITQDAADTPAATRINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0075424_1008342121	3300006904	Populus Rhizosphere	RDDESRGGSLLTTAGAAWPVSSVTDGAADTPSATSIASNAVQMVDPNEVNELDHEASVESSWVNYLLWMLGAALAAAFALWLFSRMAFLFGRRTANAG*
Ga0066709_1033656282	3300009137	Grasslands Soil	QVLNEDSRGGRLLGTAGTSWPVSQITQGDADTPAATSINTADAASNAVQVVDPNEVNELDRDASVESSWLNYLLWMLGAAFAATFALWFFLRKGFLFGRRTANAG*
Ga0066709_1046897171	3300009137	Grasslands Soil	ADEQARDDESRGGSLLTTAGAAWPVSPVTDGAADTPAATSIASNAVQMVDPNEVNELDREASVESSWVNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANAD*
Ga0114129_115428771	3300009147	Populus Rhizosphere	APAAVALPRADEQPLNDESRGGSLLATAGTAWPVSPVTEGAAGTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWMLGAALVAAFAMWVFSRIRFLFGRRTANAG*
Ga0114129_121228781	3300009147	Populus Rhizosphere	KQPAGPNEKAHAKRDAKASKPAVQEKTTDSVSQKAPEANPEVVPSPRAEEPPNDERPVTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0114129_132140511	3300009147	Populus Rhizosphere	AWPVSPVTDGAADTPAATSIASNAVQMVDPNEVNELDHEASVESSWVNYLLWMLGAALAAAFALWLFSRMAFLFGRRTANAG*
Ga0111538_110123801	3300009156	Populus Rhizosphere	VTDGAADTPAATSIASNAVQMVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG*
Ga0075423_102939512	3300009162	Populus Rhizosphere	QARDDESRGGSLLATARTAWPVSPSTEDAADTRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0126382_106654762	3300010047	Tropical Forest Soil	NEGAADTPAAASINTADAASDAVQLVDPNEVNELDRATSVESSWLDYVRWMLGAALIAAFAMWVFSRMKFLFGRRAANAC*
Ga0126373_132386682	3300010048	Tropical Forest Soil	GSLLSTAGTAWPVSAINEGAADTPAAPSINTADAASNAVQLVEPNEVNELDRAASVESSWLNYLLWTLGAALAAAFAMWFFSRMRSLFGRRTANAAEPLMK*
Ga0134111_102980071	3300010329	Grasslands Soil	ATAGTAWPVSPITEGAAGTPATNINTADAASNAVQVVDPNEVNELDRAASVESSWVSYLLWVLGAALAAAFAMWVFSKMRFLFGRRTANAS*
Ga0126370_101239343	3300010358	Tropical Forest Soil	PRADEQPLNDENRGGNLLATAGTAWPVSPTNKGAADTPAATSINTADAASDPVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLLGRRAANAG*
Ga0126370_111641101	3300010358	Tropical Forest Soil	EGAADTPAAPSINTADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAVLTAAFAMWFFSRMRSLSHL*
Ga0126372_121139511	3300010360	Tropical Forest Soil	GSVLATAGTAWPVSPITEGAAGTPAATSINTAGAASNAVQLVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRSRFGRRTANAG*
Ga0126372_126053012	3300010360	Tropical Forest Soil	STAGTAWPVSPINEGAADTPAATSINTAAAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAALTAAFAMWFFSRMRSLSHL*
Ga0126378_103016341	3300010361	Tropical Forest Soil	GGSLLSTAGTAWPVSAINEGAADTPAATSISTADAASNAVQLVDPNEVNELDRAVSVESSWLNYLLWMLGAALAAAFAMWFFSRMRSLFGRRTANAG*
Ga0126378_120265262	3300010361	Tropical Forest Soil	LPVSPINEGAADTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLDYLLWTLGAALAAAFAMWFFSRKRSLFGRRTANAS*
Ga0126379_132420161	3300010366	Tropical Forest Soil	RADEQPLNDESRGGSVLATAGTAWPVSPIAESAAGTPAATSINTADAASNAVQVVDPNEVNELDRAAIVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRILGATVSGVTRVLLLLRLQLNK*
Ga0134125_112641221	3300010371	Terrestrial Soil	ESRGGSLLTTAGAAWPVSPVTEGAADTLAATSTASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA*
Ga0105239_116649492	3300010375	Corn Rhizosphere	PSATTINTADAASNAVQVVDPNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMAFLFGRRTANAG*
Ga0126381_1026241162	3300010376	Tropical Forest Soil	LDPAVIASPRADEQPLNDESQGRSLLSTAGTALPVSPINEGAADTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLDYLLWTLGAALAAAFAMWFFSRKRSLFGRRTANAS*
Ga0126383_106434521	3300010398	Tropical Forest Soil	SRGGSVLAAAGTAWPVSPITESAAGTPAATAVQVVDPNEVNELDRAAIVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRILGATVSGVTRVLLLLRLQLNK*
Ga0126383_118564401	3300010398	Tropical Forest Soil	LDPAVIASPRADEQPLNDESQGRSLLSTAGTALPVSPINEGAADTPAATRINTADAASNAVQLVDPNEVNELDRAASVESSWLDYLLWTLGAALAAAFAMWFFSRKRSLFGRRTANAS*
Ga0126383_123215361	3300010398	Tropical Forest Soil	SRGGSLVATAGTAWPVSPIAQDAAGIPGTSVTIADAASNPVQMVDPNEINEIDRATIVESPWLNYLLWTLAVVLATAFAMWFARRMGFMFTRRTANAD*
Ga0137382_104587331	3300012200	Vadose Zone Soil	TEGAAGTPAATSINTADAASNAVQLVNPNELNELDREASVESSWVNYLLWMLGAALAAAFALWFFARIGFLFARRSANAG*
Ga0137362_111291671	3300012205	Vadose Zone Soil	SLLATAGTAWPVSPTQGAAGTPATNINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAG*
Ga0137379_103037101	3300012209	Vadose Zone Soil	TAGTAWPVSPITEGAAGTPATNINTADAASNAVQVVDPNEVNEIDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAE*
Ga0137378_106667772	3300012210	Vadose Zone Soil	GTAGTPAATSINTADAASNAAQVVDPNEVNEIDRAASVESSWVNYLLWMLAAALAVAFAMWFFSRMRFLFGRRTANAG*
Ga0137377_106774462	3300012211	Vadose Zone Soil	PAAVASPRADEQPLNDESRGGSLLATAGTAWPVSPTQGAAGTPATNINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAG*
Ga0137370_105983302	3300012285	Vadose Zone Soil	AGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAVLTAAFAIWFLPRMRFMFSRRTANAD*
Ga0137371_100707852	3300012356	Vadose Zone Soil	VSKPAVPEQAPDSLSQKALEAAVPSPRADEQPLNDESRGGSLLATAGTALPVSPITEGAAGTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWVDYLLWMLGATLAAAFAMWLFSRTRFLFGRRTANAG*
Ga0137360_106792452	3300012361	Vadose Zone Soil	PRADEQPLNDESRGGSLLATAGTAWPVSPTQGAAGTPAATNINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAG*
Ga0137358_102757183	3300012582	Vadose Zone Soil	ATAGTAWPISPVTKDAAGTPTTSVNTADAASNAVQMVDPNEINEIDRAAVESSWLNYLLWALGAALAAAFAMWFFSRMKFMFVRRTANAD*
Ga0164303_113476311	3300012957	Soil	AAPAVIASPRANEQAPNDESRGGSLLATAGTAWPVSPSTEGAADTPAATSTAPNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRTANAG*
Ga0126369_102057661	3300012971	Tropical Forest Soil	GGSLLATAGTALPVSPITEGAAGTPAATNVNIADAASDAVQAVDPNEVNELDRAAIGESSWLNYLLWMLGAALAVAFAMWVFSRMRSLFGRRTANALSRL*
Ga0163162_128324921	3300013306	Switchgrass Rhizosphere	SPRADEQPLNDESRGGSLLATAGTAWPTKDAAGTPTTSVNTADAASNAVQMVDPNEINEIDRAAVESSWLNYLLWALGAALAAAFAMWFFSRMKFMFARRTANAD*
Ga0134078_106587221	3300014157	Grasslands Soil	SLVATAGTAWPVSPTTQDAAGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANAD*
Ga0132255_1034196892	3300015374	Arabidopsis Rhizosphere	LNDESRGGSLVATAGTAWPVSPTTQDAAGTPGTSISTADAASNAVQIVDPNEINEIDRAASVESSWLNYLLWALGAALTAAFAMWFFLRMRFMFSRRTANAD*
Ga0182036_106239192	3300016270	Soil	PRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAANTPAATSINTTDAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG
Ga0182033_101052781	3300016319	Soil	DEQPLNDESRGGSVLATAGTAWPVSPITESAAGTPAATSINTADAASNAVQVVDPNEVNELDRVAIVESSWVNYLLWMLGAALAAAFAMWFFSRMRFLFGRRILEATVSGVSRVLLLLRLQLNK
Ga0182033_104825221	3300016319	Soil	AVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSSMRFLFGRRAANAG
Ga0182034_104882601	3300016371	Soil	MRNAARAAPPPAATSINTADAASNAVQVVDPNEVNELDRAASVESSWLNYLLWTLGAVLTAAFAMWFFSRMRSLSHL
Ga0182040_110497702	3300016387	Soil	ASPRVDEQPLNDESRDGSLLATAGTAWPVSPSTEGAAGTPAARSIDTADAASNAVQLVDPNEVNELDRAASVESSWLDYLWWMLGAALVAAFSMWLFLRMRFRFGRRTVNAG
Ga0066662_102753962	3300018468	Grasslands Soil	AVPSPRADEQPLNDESRGGSLVATAGTAWPVSPTTQDAAGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANSG
Ga0066669_103303193	3300018482	Grasslands Soil	ASGADEQPLNDESRGGSLVATAGTAWPVSPTTQDAAGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANAD
Ga0210406_110034171	3300021168	Soil	SRGGSLLTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0210400_115919511	3300021170	Soil	AAVASPRADEQPLNDESRGGSLLATAGTAWPVSPTQGAAGTPATNINTADAASNAVQVVDPNELNELDREASVESSWVNYLLWMLGAALAAAFALWFFSRMGFLFGRRTANAG
Ga0213874_102228563	3300021377	Plant Roots	SRGGSLLATAGAAWPVSPSTEGAADRRAATSINTADAASNAVPLVDPNEVNDLDREAIESSWLRYLLWALGAALTAAFAMWFFSRMKFMFARRTASAD
Ga0210392_104089862	3300021475	Soil	TEGTAGTPTTSVKTADAASNAVQMVDPNEINEIDRAAVESSWLNYLLWALGAALAAAFAMWFFSRMKFMFARRTANAD
Ga0126371_104762973	3300021560	Tropical Forest Soil	DTPAATSINTADAASNAVQLVDPNEVNELDRAASVESSWLDYLLWTLGAALAAAFAMWFFSRKRSLFGRRTANAS
Ga0126371_110189211	3300021560	Tropical Forest Soil	KVSKPAVREQAPSPRADEQPLNGESQGGSLLSTAGTAWPVSAINEGAADTPAAPSINTADAASNAVQLVEPNEVNELDRAASVESSWLNYLLWTLGAALAAAFAMWFFSRMRSLFGRRTANAAEPLMK
Ga0126371_127044092	3300021560	Tropical Forest Soil	GGSLLATAGTAWPVSPTNEGAANMPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAANAG
Ga0207693_106826911	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	REQAPDAVSQKPPQAAPAVVASPRADEQALNDESRGGSLLTTAGAAWPVSPVTEGAADTPAATSTAPNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0207700_102849864	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PVTEGAADTPAATSTAPNAVQLVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0207669_119465701	3300025937	Miscanthus Rhizosphere	RDDESRGGSPLTTAGTAWPVSPSTEDAADKRAATSINTADAASNAVQMVDPNEVNELDREASVESSWVNYLLWTLGAALAAGFALWFCSRMGFLFARRSANAA
Ga0207665_102739494	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LTTAGAAWPVSSVTDGAADTPSATSIASNAVQMVDPNEVNELDHEASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0207665_105929642	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	QALNDESRGGSLLATAGTSWPVSSITQDAADTPAATSINTADAASNAVQMVDPNEVNDLDREASVESSWVNYLLWMLGAVLAAAFALWFFSRKGFLFGRRTANGLSSS
Ga0209131_12860561	3300026320	Grasslands Soil	EGTAGTPAATSINTADAASNAVQVIDPNEVNELDRAASVESSWVSYLLWVLGAALAAAFAMWFFSKMRFLFGRRTANAS
Ga0209808_13001701	3300026523	Soil	DAAGTPGTSINTADGASNAVQMVDPNEINEIDRAGSVESSWLNYLLWALGAALTAAFAIWFLPRMRFMFSRRTANAD
Ga0179587_104749081	3300026557	Vadose Zone Soil	TAGTAWPTKDAAGTPTTSVNTADAASNAVQMVDPNEINEIDRAAVESSWLNYLLWALGAALAAAFAMWFFSRMKFMFARRTANAD
Ga0209418_10503112	3300027371	Forest Soil	GGSLLTTAGTAWPVSPTTEGAGDTLAATSINTADAASNVVQMVDPKEVNELDREASVESSWVNYLLWMLGAALAAAFALWFFSRKGFLFGRRTANAGLSSS
Ga0307303_100615811	3300028713	Soil	VSPVTDGAADKPAATSIASNAVQMVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0307316_103553941	3300028755	Soil	SPRADEQARDDESRGGSLLATAGAAWPVSPVTDGAADTPAATSIASNAVQMVDPNEVNELDREASVESSWVNYLLWMLGAALAAAFALWLFSRMGFLFGRRTANAG
Ga0307284_103316681	3300028799	Soil	SLLTTAGTAWPVSPATEGAAGTPTATSINTADVASNTVRMVDPNEVNELDREADVESSWVNYLWWMLGAALAAAFALWFLSRMGFLFGRRTANAD
Ga0170824_1253932281	3300031231	Forest Soil	WPVSPTQGAAGTPAATSINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWMLGAALAAAFAMWLFSRTRFLFGRRTANAG
Ga0318528_101922201	3300031561	Soil	SLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318573_101951263	3300031564	Soil	VSPTNQGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318574_108866311	3300031680	Soil	VASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318572_101977351	3300031681	Soil	APGAVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSSMRFLFGRRAANAG
Ga0318535_105548861	3300031764	Soil	APEAAPAAVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANA
Ga0318508_12346981	3300031780	Soil	APGAVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318548_102794461	3300031793	Soil	QKAPAAAPGAVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318557_101515522	3300031795	Soil	PINKGAADTAAATSINTADAASNAVQLVDPNEVNELDRAASAESSWLNYLLWTLGAALTAAFAMWFFSRMRSLSHL
Ga0318576_101742362	3300031796	Soil	TNEGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0318512_101716111	3300031846	Soil	TNQGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSSMRFLFGRRAANAG
Ga0306919_107828811	3300031879	Soil	TAGTAWPVSLINEGAADTAAATSINTADAASNAVQLVDPNEVNELGRAASAESSLLNYLLWTLGAALTAAFAMWFFSRMRSLSHL
Ga0306925_107800211	3300031890	Soil	DEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTTDAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG
Ga0306925_111083262	3300031890	Soil	VPEQAPDAAWQKAPEAAPGAVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0306925_117334372	3300031890	Soil	GESQGGSLLSTAGTAWPVSAINEGAADTPAATSINTVDAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAALAAAFAMWFFSRMRSLFGRRTANAAEPLMK
Ga0306923_113161991	3300031910	Soil	AVASPRADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG
Ga0306923_117279802	3300031910	Soil	DESRDGSLLATAGTAWPVSPSTEGAAGTPAARSIDTADAASNAVQLVDPNEVNELDRAASVESSWLDYLWWMLGAALVAAFSMWLFLRMRFRFGRRTVNAG
Ga0306923_118164802	3300031910	Soil	PAVIASPRADEQPLNDESQGGSLLSTAGTAWPVSPINKGAADTAAATSINTADAASNAVQLVDPNEVNELDRAASAESSWLNYLLWTLGAALTAAFAMWFFSRMRSLSHL
Ga0306921_100482111	3300031912	Soil	NKGAADTPAATSINTADAASGAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAANAG
Ga0306921_108373763	3300031912	Soil	VWPVSPTNEGAADTPAVTSINTADAASDAVQLVDPNEVNELDRAASAESSWLDYVWWMLGAALIAAFAMWVFSRMRFLLGRRAANAG
Ga0306921_109219282	3300031912	Soil	WPVSAINEGAADTPAATSITADAASNAVQLVDPNEVNELDRAASVESSWLNYLLWTLGAALAAAFAMWFFSRMRSLFGRRTANAAEPLMK
Ga0310916_103620893	3300031942	Soil	NDENRGGSLLATAGTVWPVSPTNEGAADTPAVTSINTADAASDAVQLVDPNEVNELDRAASAESSWLDYVWWMLGAALIAAFAMWVFSRMRFLLGRRAANAG
Ga0310910_101628333	3300031946	Soil	VSPTNKGAADTPAATSINTADAASGAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMLVFSRMRFLFGRRAANAG
Ga0310909_102339743	3300031947	Soil	GGSLLATAGTAWPVSPTNQGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG
Ga0306922_111389402	3300032001	Soil	SPRAYEQPLNDENRGGSLLATAGTVWPVSPTNEGAADTPAVTSINTADAASDAVQLVDPNEVNELDRAASAESSWLDYVWWMLGAALIAAFAMWVFSRMRFLLGRRAANAG
Ga0306922_121252461	3300032001	Soil	VLATAGTAWPVSPITESAAGTPAATAVQVVDPNEVNEPDRATIVESSWVNYLLWMLGAALAAALAMWFFSRMRFLFGRRILGATISGVTRVLLLLRLQLNK
Ga0310911_102867191	3300032035	Soil	DENRGGSLLATAGTAWPVSPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG
Ga0318533_100920361	3300032059	Soil	VAKVSKPAVPEQAPDAAWQKAPEAAPAAVASPHADEQPLNDENRGGSLLATAGTAWPVSPTNEGAAHKPATTSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSSMRFLFGRRAANAG
Ga0318513_102613482	3300032065	Soil	PVSPINKGAADAAAATSINTADAASNAVQLVDPNEVNELDRAASAESSWLNYLLWTLGAALTAAFAMWFFSRMRSLSHL
Ga0306924_109620551	3300032076	Soil	MRNAARAAPPPAATSINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWVLGAALAAAFAMWFFSRMRFLFGRRTA
Ga0318518_101828061	3300032090	Soil	SPTNEGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWIFSRMRFLFGRRAANAG
Ga0306920_1027826122	3300032261	Soil	MRNAARAAPPPAATSINTADAASNAVQVVDPNEVNELDRAASVESSWVNYLLWVLGAALAAAFAMWFFSRMRFLFGRRTANAG
Ga0310914_116765561	3300033289	Soil	VSPTNQGAAHKPAATSINTADAASDAVQLVDPNEVNELDRAASVESSWLDYVWWMLGAALIAAFAMWVFSRMRFLFGRRAVNAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences