Metagenome / Metatranscriptome Family F068045

Basic Information
Family ID	F068045
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	80 residues
Representative Sequence	MEWNLVRRRRDTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA
Number of Associated Samples	107
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.26 %
% of genes near scaffold ends (potentially truncated)	31.20 %
% of genes from short scaffolds (< 2000 bps)	63.20 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (55.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.400 % of family members)
Environment Ontology (ENVO)	Unclassified (36.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.600 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.21% β-sheet: 17.48% Coil/Unstructured: 56.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13360	PQQ_2	12.80
PF03640	Lipoprotein_15	12.00
PF00127	Copper-bind	12.00
PF00005	ABC_tran	6.40
PF03992	ABM	4.80
PF03734	YkuD	2.40
PF00704	Glyco_hydro_18	1.60
PF12695	Abhydrolase_5	1.60
PF01694	Rhomboid	1.60
PF05977	MFS_3	0.80
PF01471	PG_binding_1	0.80
PF13462	Thioredoxin_4	0.80
PF00196	GerE	0.80
PF13570	PQQ_3	0.80
PF01011	PQQ	0.80
PF00027	cNMP_binding	0.80
PF13191	AAA_16	0.80
PF00072	Response_reg	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	12.00
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.40
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.40
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.80

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.20 %
Unclassified	root	N/A	44.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.20 %
Unclassified	root	N/A	44.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.20 %
Unclassified	root	N/A	44.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.60 %
Unclassified	root	N/A	44.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.80 %
Unclassified	root	N/A	44.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.40 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	3.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.60 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	3.20 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.40 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.60 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	3.20 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.40 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.60 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	3.20 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.40 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.60 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	3.20 %
Streptomyces mirabilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mirabilis	2.40 %
unclassified Marmoricola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.60 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	3.20 %
Streptomyces mirabilis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mirabilis	2.40 %
Marmoricola sp. URHB0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0739550	Not Available	852	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0748146	Not Available	699	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2058107	Not Available	540	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100637720	Not Available	766	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100638823	Not Available	591	Open in IMG/M
3300000881\|JGI10215J12807_1034462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mirabilis	3978	Open in IMG/M
3300002568\|C688J35102_120548765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300003321\|soilH1_10277270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300003659\|JGI25404J52841_10075110	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300004081\|Ga0063454_100015612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2235	Open in IMG/M
3300004153\|Ga0063455_100014639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1944	Open in IMG/M
3300004463\|Ga0063356_101077211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
3300004479\|Ga0062595_101374232	Not Available	641	Open in IMG/M
3300005093\|Ga0062594_100142250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1550	Open in IMG/M
3300005294\|Ga0065705_10007801	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300005294\|Ga0065705_10782564	Not Available	617	Open in IMG/M
3300005333\|Ga0070677_10117729	Not Available	1195	Open in IMG/M
3300005336\|Ga0070680_100124126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2157	Open in IMG/M
3300005355\|Ga0070671_100322701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1316	Open in IMG/M
3300005365\|Ga0070688_100128071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1709	Open in IMG/M
3300005440\|Ga0070705_101352780	Not Available	592	Open in IMG/M
3300005444\|Ga0070694_101653344	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005467\|Ga0070706_100140726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2253	Open in IMG/M
3300005526\|Ga0073909_10167529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300005617\|Ga0068859_101485744	Not Available	748	Open in IMG/M
3300005718\|Ga0068866_11025993	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005983\|Ga0081540_1014213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5116	Open in IMG/M
3300005983\|Ga0081540_1024042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3545	Open in IMG/M
3300006058\|Ga0075432_10131119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300006173\|Ga0070716_100872335	Not Available	702	Open in IMG/M
3300006178\|Ga0075367_10333361	Not Available	957	Open in IMG/M
3300006845\|Ga0075421_100353555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1774	Open in IMG/M
3300006845\|Ga0075421_101895731	Not Available	638	Open in IMG/M
3300006880\|Ga0075429_101673314	Not Available	553	Open in IMG/M
3300006904\|Ga0075424_102486614	Not Available	542	Open in IMG/M
3300009098\|Ga0105245_10082712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2937	Open in IMG/M
3300009100\|Ga0075418_11877049	Not Available	652	Open in IMG/M
3300009162\|Ga0075423_12664859	Not Available	547	Open in IMG/M
3300009553\|Ga0105249_11432909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300010147\|Ga0126319_1085934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	566	Open in IMG/M
3300010147\|Ga0126319_1144816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300010154\|Ga0127503_10474529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300010154\|Ga0127503_11119089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300012200\|Ga0137382_10638434	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300012208\|Ga0137376_11527537	Not Available	559	Open in IMG/M
3300012211\|Ga0137377_11477352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300012212\|Ga0150985_101625692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300012212\|Ga0150985_102622991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2218	Open in IMG/M
3300012212\|Ga0150985_106990910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300012212\|Ga0150985_110036666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	771	Open in IMG/M
3300012212\|Ga0150985_113693830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012212\|Ga0150985_120895221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300012212\|Ga0150985_121084303	Not Available	607	Open in IMG/M
3300012469\|Ga0150984_106705775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300012896\|Ga0157303_10125675	Not Available	657	Open in IMG/M
3300012901\|Ga0157288_10059935	Not Available	918	Open in IMG/M
3300012904\|Ga0157282_10026300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300012910\|Ga0157308_10003442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3004	Open in IMG/M
3300012937\|Ga0162653_100038335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300012951\|Ga0164300_10994237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	539	Open in IMG/M
3300012955\|Ga0164298_10029112	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300012961\|Ga0164302_10738487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300012987\|Ga0164307_10513405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300012989\|Ga0164305_10505652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300012989\|Ga0164305_11825106	Not Available	550	Open in IMG/M
3300013100\|Ga0157373_11335042	Not Available	544	Open in IMG/M
3300015201\|Ga0173478_10009588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2464	Open in IMG/M
3300015371\|Ga0132258_12566205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1274	Open in IMG/M
3300015374\|Ga0132255_100056676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5137	Open in IMG/M
3300018028\|Ga0184608_10398918	Not Available	598	Open in IMG/M
3300018054\|Ga0184621_10072789	Not Available	1184	Open in IMG/M
3300019356\|Ga0173481_10004262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3740	Open in IMG/M
3300019362\|Ga0173479_10027671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mirabilis	1686	Open in IMG/M
3300019869\|Ga0193705_1005464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2778	Open in IMG/M
3300019873\|Ga0193700_1028027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300019886\|Ga0193727_1007036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4503	Open in IMG/M
3300020002\|Ga0193730_1045848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1264	Open in IMG/M
3300020005\|Ga0193697_1030321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1350	Open in IMG/M
3300020016\|Ga0193696_1002923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4986	Open in IMG/M
3300020080\|Ga0206350_10180464	Not Available	572	Open in IMG/M
3300020140\|Ga0179590_1080861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	865	Open in IMG/M
3300021363\|Ga0193699_10472362	Not Available	514	Open in IMG/M
3300022893\|Ga0247787_1022195	Not Available	854	Open in IMG/M
3300023266\|Ga0247789_1017428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300024181\|Ga0247693_1027455	Not Available	778	Open in IMG/M
3300024347\|Ga0179591_1110277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3957	Open in IMG/M
3300025885\|Ga0207653_10005869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3831	Open in IMG/M
3300025899\|Ga0207642_10009199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3427	Open in IMG/M
3300025899\|Ga0207642_10691786	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300025907\|Ga0207645_10158219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	1481	Open in IMG/M
3300025913\|Ga0207695_10588100	Not Available	994	Open in IMG/M
3300026023\|Ga0207677_10278384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1372	Open in IMG/M
3300026075\|Ga0207708_11196677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300027821\|Ga0209811_10024787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1979	Open in IMG/M
3300027873\|Ga0209814_10171841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces mirabilis	932	Open in IMG/M
3300027907\|Ga0207428_10002990	All Organisms → cellular organisms → Bacteria	16692	Open in IMG/M
3300027993\|Ga0247749_1028849	Not Available	623	Open in IMG/M
3300028755\|Ga0307316_10211659	Not Available	700	Open in IMG/M
3300028793\|Ga0307299_10008649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3581	Open in IMG/M
3300031720\|Ga0307469_12082147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300031740\|Ga0307468_100565634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.00%
Host-Associated	Host-Associated	40.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.40%
Plants	Host-Associated → Plants	40.00%
Aquatic	Environmental → Aquatic	5.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.00%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Sediment	Environmental → Aquatic → Sediment	2.40%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.20%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.80%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.40%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.40%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_07395501	2228664021	Soil	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACAHAILDRRARLEETVAA
ICChiseqgaiiDRAFT_07481462	3300000033	Soil	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELEXPPRLLPGVCDACAXAXLDRRARLXETVAA*
ICChiseqgaiiDRAFT_20581072	3300000033	Soil	MEWKVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGICDDCADAIFDRRARSEDAVAA*
INPhiseqgaiiFebDRAFT_1006377201	3300000364	Soil	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACAHAILDRRARLE
INPhiseqgaiiFebDRAFT_1006388231	3300000364	Soil	MEWKVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGICDDCADAIFDRRARSEEAVAA*
JGI10215J12807_10344624	3300000881	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDRRARLEETVAA*
C688J35102_1205487653	3300002568	Soil	MEWNRIRRRRNPDLVTCSLCLRVRRDSAWVEPESVITELRSYELDTAPTLLPAVCDACIDAIVGRRAQWEDTLAA*
soilH1_102772702	3300003321	Sugarcane Root And Bulk Soil	MELKLVPQRRTKLVACSLCLRVRRGSAWVDAETAIRELRTYELPSLPRLEPAVCDDCLAAIVERRMQAEEAIAA*
JGI25404J52841_100751101	3300003659	Tabebuia Heterophylla Rhizosphere	MKWNLVRRARDTDLVTCSLCLRVRRGSAWIEAEAVITELRSYELDVPPRLLPGVCDDCADAILLRRARXAEAIAA*
Ga0063454_1000156124	3300004081	Soil	MEWRIGRRRNPNLVTCSLCLRVHRGSAWVEPESVITELRSYELDTAPTLLPGVCDACTDAILGRRAQPEETLAA*
Ga0063455_1000146391	3300004153	Soil	WNRIRRRRNPDLVTCSLCLRVRRDSAWVEPESVITELRSYELDTAPTLLPAVCDACIDAIVGRRAQWEDTLAA*
Ga0063356_1010772114	3300004463	Arabidopsis Thaliana Rhizosphere	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0062595_1003422182	3300004479	Soil	MAGGREGTSPPASDPRVHIVTGLKGLVMEWNLVQRRRETELVTCSLCLRVRRGSAWIEADAVIAQLRSYELDTPPRLLPGVCDDCADAIFDRRAQTEGAIAA*
Ga0062595_1013742322	3300004479	Soil	MEWNLRSRRRHADLAACSLCLRVHRGSAWVEAEDVIRELRSYELPAAPQLQPGICDSCADAILGRRARAAQTIAA*
Ga0062594_1001422503	3300005093	Soil	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0065705_100078013	3300005294	Switchgrass Rhizosphere	MEWNVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGICDDCADAIFDRRARSEDVIAA*
Ga0065705_107825641	3300005294	Switchgrass Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPKLLPGVCDACADAILDRRARLEETVAA*
Ga0070677_101177293	3300005333	Miscanthus Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0070680_1001241262	3300005336	Corn Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0070671_1003227011	3300005355	Switchgrass Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFYRRARSEEVIAA*
Ga0070688_1001280713	3300005365	Switchgrass Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAVCDDCADAIFDRRA
Ga0070705_1013527801	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEWNLVRRSHDAELVACSLCLRVRRGSAWIEAEEVIRELRSYELPVAPRLQSGVCDDCADAIFDRRAHAEEEAIAA*
Ga0070694_1016533441	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MEWNVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPLRLLPGICDDCADAIFDRRARSEDVIAA*
Ga0070706_1001407263	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEWNLVRRSHDAELVACSLCLRVRRGSTWIEAEEAIRQLRSYELPVAPRLQPGVCDDCADSIFDRRAHAEEEAIAA*
Ga0073909_101675292	3300005526	Surface Soil	MEWKVLRRRSGTDLVTCSLCLRVRRGSAWVESEDVITELRSYELDAPPRLLPGVCDECADAIFDRRARTEEGIAA*
Ga0070697_1011272591	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RGPVSSRAARKPTTGQQVAAISGQQAPRMGAGREGMSARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0068859_1014857442	3300005617	Switchgrass Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELERPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0068866_110259931	3300005718	Miscanthus Rhizosphere	MEWNVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGICDDCADTIFDRRARTEDAVAA*
Ga0068861_1005418091	3300005719	Switchgrass Rhizosphere	PITCQQVAAIWGQQAVRIAAGGEGADAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETAAA*
Ga0081540_10142134	3300005983	Tabebuia Heterophylla Rhizosphere	MEWKVIRRRHDTALVTCSLCLRVRRGSEWVEPEDVITALRSYELDSPPRLLPGVCDDCADAIFDRRAQLEETVAA*
Ga0081540_10240425	3300005983	Tabebuia Heterophylla Rhizosphere	MKWNLVRRARDTDLVTCSLCLRVRRGSAWIEAEAVITELHSYELDVPPRLLPGVCDDCADAILLRRARTAEAIAA*
Ga0075432_101311191	3300006058	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILD
Ga0070716_1008723351	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	WKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0075367_103333612	3300006178	Populus Endosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELQTPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0075421_1003535553	3300006845	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILD
Ga0075421_1018957313	3300006845	Populus Rhizosphere	MVWKVIRRRRKTDLVTCSLCLRVRRGSDWVEPEDVIAELRSFDLAAPPRLLPGVCDDCADAIF
Ga0075420_1009505391	3300006853	Populus Rhizosphere	ADTPRSDPCLHNVPTRKGPVMEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0075429_1016733142	3300006880	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETAAA*
Ga0075424_1024866143	3300006904	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDR
Ga0075435_1002846931	3300007076	Populus Rhizosphere	GADAPRSDPCLHNVPTRKGPVMEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELQTPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0105250_100910592	3300009092	Switchgrass Rhizosphere	MGAGREGTSARSGDPHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0105245_100827123	3300009098	Miscanthus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETAAA*
Ga0075418_118770492	3300009100	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACAD
Ga0105247_106485961	3300009101	Switchgrass Rhizosphere	AISGQQAPRMGAGREGTSARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0075423_126648591	3300009162	Populus Rhizosphere	VVGQAATACTDLVACSLYLRVRRGSAWVEPEDVITELRSFELETPPRLLPAVCDGCADAILDRRARLEETVAA*
Ga0105241_105569681	3300009174	Corn Rhizosphere	ALRMGAGREGTSARSGDPHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0105242_100593511	3300009176	Miscanthus Rhizosphere	MSARGGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0105248_107962363	3300009177	Switchgrass Rhizosphere	MSARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0105237_100895542	3300009545	Corn Rhizosphere	MGAGREGTSARSGDPHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0105249_114329091	3300009553	Switchgrass Rhizosphere	DPRLHNVPTPKGPGMEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0126319_10859341	3300010147	Soil	LRGVVMEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYDLESPPNLLPGVCDDCADAIFDRRARSEETVAA*
Ga0126319_11448163	3300010147	Soil	LKGLAMEWNLRSLRPHTDLVTCSLCLRVQRGSDWVEAEDIIKELRSYELPTAPHLRPGMCDACADAVFGRRARAAETIAA*
Ga0127503_104745292	3300010154	Soil	WNLRSRLRGTDLIACSLCLRVQRGSGWVEAEDVIRELRSYEFPAAPRLRPGMCDACADAILGRRARPVETIAA*
Ga0127503_111190892	3300010154	Soil	WNLRSRRPRTDLVTRSLCLRVLHGSARVEAENVIKELRSYELSTVPHLRAGMCDACAEAIFSRRAQAVQTLAA*
Ga0134126_101722042	3300010396	Terrestrial Soil	MGAGREGTSARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0137382_106384342	3300012200	Vadose Zone Soil	MEWKVIRRRRSTDLVACSLCLRVRRDSAWVEPEDVITELRSYDLEDPPRLLPGVCDDCADAIFDRRAGIEEAIAA*
Ga0137376_115275371	3300012208	Vadose Zone Soil	MEWNLKSRRRHTDLVACSLCLRVHRGSGWVEAEDVIRELLSYELPAVPRLQPGMCDDCADAIFGRRARVVETVAA*
Ga0137377_114773522	3300012211	Vadose Zone Soil	MEWNLRSLRPHADLVTCSLCLRVQRGSAWVEAEHIIKELRSYELPTAPHLRPGMCDACADAIFGRRARAAETIAA*
Ga0150985_1016256921	3300012212	Avena Fatua Rhizosphere	KGVVMEWKVIRRRSETGLVACSLCLRVRSGSAWLEPEDVITELRSYELESPPTLLPGVCDACADAIFDRRARREETVAA*
Ga0150985_1026229914	3300012212	Avena Fatua Rhizosphere	VESHTTTANPDLVTCSLCLRVRRDSAWVEPESVITELRSYELDTAPTLLPAVCDACIDAIVGRRAQWEDTLAA*
Ga0150985_1069909101	3300012212	Avena Fatua Rhizosphere	LRGTKGVAMEWRIGRRRNPNLVTCSLCLRVHRGSAWVEPESVITELRSYELDTAPTLLPGVCDACTDAILGRRAQPEETLAA*
Ga0150985_1100366661	3300012212	Avena Fatua Rhizosphere	IRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYDLESPPNLLPGVCDDCADAIFDRRARPEETVAA*
Ga0150985_1136938302	3300012212	Avena Fatua Rhizosphere	RLKGLAMEWNLRSLRPHTDLVTCSLCLRVQRGSAWVEAEHVIEELRSYELPSAPHLRPGMCDACADAIFGRRARAAETIAA*
Ga0150985_1208952211	3300012212	Avena Fatua Rhizosphere	MEWNLRSRLRHTDLLVCSLCLRVQRGSAWVEAEDVIRELRSYEFPAAPPLRPGMCDACADAIFGRRARPVETITA*
Ga0150985_1210843031	3300012212	Avena Fatua Rhizosphere	DPRLHIVPAPKGVVMEWKVIRRRRSTDLVACSLCLRVRRGSAWVEPEDVITELRSYDLEAPPRLLPGVCDDCADAIFDRRAGIEEAIAA*
Ga0150984_1067057751	3300012469	Avena Fatua Rhizosphere	GTKGVAMEWRIGRRRNPNLVTCSLCLRVHRGSAWVEPESVITELRSYELDTAPTLLPGVCDACTDAILGRRAQPEETLAA*
Ga0157309_100754682	3300012895	Soil	DAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0157303_101256751	3300012896	Soil	TPKGPVMEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0157292_100351443	3300012900	Soil	IAAGGEGADAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPEDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0157288_100599351	3300012901	Soil	DAPRSDPRLHNVPTPKGPVMGWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPEDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0157282_100263003	3300012904	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDR
Ga0157308_100034422	3300012910	Soil	MGWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPEDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0162653_1000383352	3300012937	Soil	MAELVTCSLCLRVRRGSAWIEADAVIAQLRSYELDTPPRLLPGVCDDCADAIFDRRAQSEGAIAA*
Ga0164300_109942371	3300012951	Soil	MEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYDLESPPNLLPGICDDCADAIFDRRARPEETVAA*
Ga0164298_100291123	3300012955	Soil	MEWRVIHRRKDTDLVTCSLCLRVRRGSAWVEADDVITELRSYELETPPNLLPGVCDDCADAIFDRRARLEETVAA*
Ga0164298_103880641	3300012955	Soil	VSSRAARKSTTGQQVAAISGQQAPQMGAGREAMSARSGHPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0164302_104434502	3300012961	Soil	GAGREGMRARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVHRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0164302_107384872	3300012961	Soil	KGVVMEWKVLRRRSGTDLVTCSLCLRVRRGSAWVESEDVITELRSYELDAPPRLLPGVCDECADAIFDRRARTEEGIAA*
Ga0164304_101475591	3300012986	Soil	MSARSGHPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0164307_105134052	3300012987	Soil	MEWRVIHRRKDTDLVTCSLCLRVRRGSAWVEADDVITELRSYELETPPNLLPGVCNDCADAIFDRRARLEETVAA*
Ga0164305_105056523	3300012989	Soil	MEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYDLESPPNLLPGICDDCADAIFDRRARPE
Ga0164305_118251062	3300012989	Soil	VMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0157373_113350421	3300013100	Corn Rhizosphere	PHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0157378_100210803	3300013297	Miscanthus Rhizosphere	MGAGREGTSARSGDPHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLGLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0163162_116083801	3300013306	Switchgrass Rhizosphere	ITCQQVAAIWGQQADRIAAGGEGAAAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0157375_100095513	3300013308	Miscanthus Rhizosphere	MGAGREGTSARSGDPRLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0157379_112287931	3300014968	Switchgrass Rhizosphere	REGTSARSGDPHLHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA*
Ga0173478_100095881	3300015201	Soil	MEWNLVRRRRNTDLITCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA*
Ga0132258_125662052	3300015371	Arabidopsis Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITALRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0132255_1000566762	3300015374	Arabidopsis Rhizosphere	MEWNLVRRRRDTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA*
Ga0184608_103989182	3300018028	Groundwater Sediment	WKVIRRRSRTDLVTCSLCLRVRRGSAWVEPEFLITELRSYELDTPPRLLPGVCDDCADAIFDRRVRTEEVIAA
Ga0184621_100727891	3300018054	Groundwater Sediment	MEWKVIRRRSRTDLVTCSLCLRVRRGSAWVEPEFLITELRSYELDTPPRLLPGVCDDCADAIFDRRVRTEEVIAA
Ga0184624_100431292	3300018073	Groundwater Sediment	MAGGREGRSASASDPRVHIVTGLKGLVMEWNLVQRRRETELVTCSLCLRVRRGSAWIEADAVIAQLRSYGLDTPPRLLPGVCDDCADAIFDRRAQSEGAIAA
Ga0173481_100042625	3300019356	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDRRARLEETVAA
Ga0173482_105381311	3300019361	Soil	GQQAVRIAAGGEGADAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA
Ga0173479_100276713	3300019362	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARLEETVAA
Ga0193705_10054644	3300019869	Soil	MEWKVIRRRSRTDLVTCSLCLRVRRGSAWVEPEALITELRSYELDTPPRLLPGVCDDCADAIFDRRVRTEEVIAA
Ga0193700_10280271	3300019873	Soil	MEWKVIRRRSRTDLVTCSLCLRVRRGSAWVEPEALITELRSYELDTPPRLLPGVCDDCAD
Ga0193727_10070364	3300019886	Soil	MEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPGVCDDCADAIFDRRARPEETVAA
Ga0193730_10458482	3300020002	Soil	MEWKVIQRRRDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGVCDDCADAIFDRRAQLEETVAA
Ga0193697_10303211	3300020005	Soil	MEWNVIRRRRSTDLVTCSLCLRVRRGSDWVEPEDVIAELRSYELESPPRLWPGVCDDCADAIFDRRARLD
Ga0193696_10029234	3300020016	Soil	MEWNVIRRRRSTDLVTCSLCLRVRRGSDWVEPEDVIAELRSYELESPPRLWPGVCDDCADAIFDRRARLDEPVAA
Ga0206350_101804641	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	LHIVPAPKGVVMEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA
Ga0179590_10808612	3300020140	Vadose Zone Soil	MEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYDLDSPPNLLPGVCDDCADAIFDRRARPEETVAA
Ga0193699_104723621	3300021363	Soil	MEWKVIRRRHDTNLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPGICDDCADAIFDRRARAEETVAA
Ga0247787_10221951	3300022893	Soil	PKGPVMEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDRRARLEETVAA
Ga0247789_10174283	3300023266	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELENPPSLLPGVCDACADAILDRRARL
Ga0247693_10274551	3300024181	Soil	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLMPAICDDCADAIFDRRARSEEVIAA
Ga0179591_11102774	3300024347	Vadose Zone Soil	MEWNLGSLRPHADLVTCSLCLRAQRGSAWVEAEHVIKELRSYELPTAPHLRPGMCDACADAIFGRRAQAAQTIAA
Ga0207653_100058693	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPNLLPAICDDCADAIFDRRARSEEVIAA
Ga0207642_100091992	3300025899	Miscanthus Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELESPPNLLPAICDDCADAIFDRRARSEEVIAA
Ga0207642_106917862	3300025899	Miscanthus Rhizosphere	MEWNVIRRRRDTNLVTCSVCLRVRRGSAWIEPEDVITALRSYELESPPRLLPGICDDCADTIFDRRARTEDAVAA
Ga0207645_101582191	3300025907	Miscanthus Rhizosphere	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPHLLPAICDDCADAIFDRRARSEEVIAA
Ga0207695_105881002	3300025913	Corn Rhizosphere	DTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPKLLPAICDDCADAIFDRRARSEEVIAA
Ga0207687_101111253	3300025927	Miscanthus Rhizosphere	AAGGEGADAPRSDPRLHNVPTPKGPVMEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA
Ga0207677_102783842	3300026023	Miscanthus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA
Ga0207708_111966771	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PMPRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETAAA
Ga0209811_100247873	3300027821	Surface Soil	MEWKVIHRRGDTDLVTCSLCLRVRRGSAWIEPEDVITALRSYELDSPPKLLPAICDDCADAIFDRRARSEEVIAA
Ga0209814_101718413	3300027873	Populus Rhizosphere	TDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA
Ga0207428_100029901	3300027907	Populus Rhizosphere	MEWNLVRRRRNTDLVTCSLCLRVRRGSAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETVAA
Ga0247749_10288491	3300027993	Soil	MEWNLVRRRRNTDLVTCSLCLSVRRGSAWVEPQDVITELRSYELETPPSLLPGVCDACADAILDRRARLEETV
Ga0307316_102116592	3300028755	Soil	MEWKVIRRRSRTDLVTCSLCLRVRRRSAWVEPEALITELRSYELDTPPRLLPGVCDDCADAIFDRRVRTEEVIAA
Ga0307299_100086495	3300028793	Soil	MEWKVTRRRSRTDLVTCSLCLRVRRGSAWVEPEALITELRSYELDTPPRLLPGVCDDCADAIFDRRVRTEEVIAA
Ga0307469_120821471	3300031720	Hardwood Forest Soil	RRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADASLDRRARLEETAAA
Ga0307468_1005656342	3300031740	Hardwood Forest Soil	MEWNLVRRRRNTDLVTCSLCLRVRRASAWVEPEDVITELRSYELETPPRLLPGVCDACADAILDRRARLEETAAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068045

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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