Metagenome / Metatranscriptome Family F068033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068033
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	59 residues
Representative Sequence	MIPSEDPDYGDLGPAFPAWTRPGRAPILQPPKPEIPPSPRILERVMDRDADWEAAD
Number of Associated Samples	103
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.40 %
% of genes near scaffold ends (potentially truncated)	84.80 %
% of genes from short scaffolds (< 2000 bps)	88.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.600 % of family members)
Environment Ontology (ENVO)	Unclassified (23.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.05% β-sheet: 0.00% Coil/Unstructured: 80.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13581	HATPase_c_2	6.40
PF13560	HTH_31	4.00
PF01636	APH	3.20
PF00392	GntR	3.20
PF01928	CYTH	1.60
PF01850	PIN	1.60
PF12728	HTH_17	1.60
PF00903	Glyoxalase	1.60
PF05016	ParE_toxin	1.60
PF13443	HTH_26	0.80
PF00126	HTH_1	0.80
PF04185	Phosphoesterase	0.80
PF02899	Phage_int_SAM_1	0.80
PF12697	Abhydrolase_6	0.80
PF13450	NAD_binding_8	0.80
PF03704	BTAD	0.80
PF11774	Lsr2	0.80
PF00005	ABC_tran	0.80
PF00589	Phage_integrase	0.80
PF02129	Peptidase_S15	0.80
PF12146	Hydrolase_4	0.80
PF00107	ADH_zinc_N	0.80
PF09391	DUF2000	0.80
PF12802	MarR_2	0.80
PF00293	NUDIX	0.80
PF00196	GerE	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.80
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.80
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.80
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.20 %
Unclassified	root	N/A	48.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.20 %
Unclassified	root	N/A	48.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.20 %
Unclassified	root	N/A	48.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	12.80 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.40 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.40 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	2.40 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.60 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.80 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	8.00 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.20 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.40 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	2.40 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.40 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.60 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.80 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	8.00 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	2.40 %
Herbiconiux	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux	2.40 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.40 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	1.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.60 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.80 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.80 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.00 %
unclassified Herbiconiux	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux	2.40 %
Catenulispora pinistramenti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	2.40 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.40 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	1.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.60 %
unclassified Amycolatopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis	0.80 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.80 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	8.00 %
Herbiconiux sp. CPCC 203386	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 203386	2.40 %
Catenulispora pinistramenti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	2.40 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.40 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	1.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.60 %
Amycolatopsis sp. FDAARGOS 1241	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	0.80 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.80 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_106897530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	886	Open in IMG/M
3300005187\|Ga0066675_11021534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	620	Open in IMG/M
3300005337\|Ga0070682_101718035	Not Available	545	Open in IMG/M
3300005435\|Ga0070714_100589635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1067	Open in IMG/M
3300005435\|Ga0070714_100627592	Not Available	1033	Open in IMG/M
3300005435\|Ga0070714_101420750	Not Available	677	Open in IMG/M
3300005435\|Ga0070714_101449773	Not Available	670	Open in IMG/M
3300005436\|Ga0070713_101096445	Not Available	769	Open in IMG/M
3300005436\|Ga0070713_102485210	Not Available	500	Open in IMG/M
3300005437\|Ga0070710_11053259	Not Available	595	Open in IMG/M
3300005458\|Ga0070681_10726386	Not Available	909	Open in IMG/M
3300005530\|Ga0070679_100140383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2396	Open in IMG/M
3300005618\|Ga0068864_101476937	Not Available	682	Open in IMG/M
3300005952\|Ga0080026_10040425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1198	Open in IMG/M
3300006028\|Ga0070717_10413693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1212	Open in IMG/M
3300006028\|Ga0070717_11950104	Not Available	530	Open in IMG/M
3300006028\|Ga0070717_12040414	Not Available	516	Open in IMG/M
3300006032\|Ga0066696_10413175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	881	Open in IMG/M
3300006173\|Ga0070716_101398601	Not Available	569	Open in IMG/M
3300006175\|Ga0070712_101735205	Not Available	546	Open in IMG/M
3300006175\|Ga0070712_101741364	Not Available	545	Open in IMG/M
3300006237\|Ga0097621_101630296	Not Available	614	Open in IMG/M
3300006579\|Ga0074054_11728944	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300006806\|Ga0079220_11422260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	590	Open in IMG/M
3300006953\|Ga0074063_13405637	Not Available	616	Open in IMG/M
3300009176\|Ga0105242_10869259	Not Available	899	Open in IMG/M
3300009545\|Ga0105237_12709976	Not Available	507	Open in IMG/M
3300009551\|Ga0105238_12686987	Not Available	534	Open in IMG/M
3300009698\|Ga0116216_10630024	Not Available	645	Open in IMG/M
3300009824\|Ga0116219_10154920	Not Available	1324	Open in IMG/M
3300009839\|Ga0116223_10258301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300010358\|Ga0126370_10319538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300010359\|Ga0126376_12410683	Not Available	573	Open in IMG/M
3300010360\|Ga0126372_10541869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1103	Open in IMG/M
3300010360\|Ga0126372_12265795	Not Available	593	Open in IMG/M
3300010366\|Ga0126379_10397914	Not Available	1424	Open in IMG/M
3300010371\|Ga0134125_10020167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7433	Open in IMG/M
3300010371\|Ga0134125_10456207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1417	Open in IMG/M
3300010376\|Ga0126381_104486788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	539	Open in IMG/M
3300010379\|Ga0136449_100184729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4002	Open in IMG/M
3300010397\|Ga0134124_11444299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300010401\|Ga0134121_10950323	Not Available	839	Open in IMG/M
3300010869\|Ga0126359_1182408	Not Available	792	Open in IMG/M
3300012201\|Ga0137365_10107517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2098	Open in IMG/M
3300012201\|Ga0137365_10214651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300012357\|Ga0137384_10301059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1333	Open in IMG/M
3300012357\|Ga0137384_11247951	Not Available	589	Open in IMG/M
3300012359\|Ga0137385_11388382	Not Available	566	Open in IMG/M
3300012960\|Ga0164301_11628839	Not Available	537	Open in IMG/M
3300012987\|Ga0164307_11136921	Not Available	644	Open in IMG/M
3300016270\|Ga0182036_10105458	All Organisms → cellular organisms → Bacteria	1925	Open in IMG/M
3300016371\|Ga0182034_11848739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora pinistramenti	533	Open in IMG/M
3300016422\|Ga0182039_10226855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300017926\|Ga0187807_1279624	Not Available	551	Open in IMG/M
3300017928\|Ga0187806_1075374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300017932\|Ga0187814_10181493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	789	Open in IMG/M
3300017946\|Ga0187879_10059896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2226	Open in IMG/M
3300017973\|Ga0187780_11446397	Not Available	507	Open in IMG/M
3300018468\|Ga0066662_12288750	Not Available	568	Open in IMG/M
3300020581\|Ga0210399_10871543	Not Available	732	Open in IMG/M
3300021171\|Ga0210405_10393065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1092	Open in IMG/M
3300021178\|Ga0210408_10968047	Not Available	660	Open in IMG/M
3300021403\|Ga0210397_10092333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2028	Open in IMG/M
3300021475\|Ga0210392_10801190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300021478\|Ga0210402_10041246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4012	Open in IMG/M
3300021478\|Ga0210402_10259784	Not Available	1604	Open in IMG/M
3300021478\|Ga0210402_11263067	Not Available	666	Open in IMG/M
3300021478\|Ga0210402_11406003	Not Available	625	Open in IMG/M
3300021560\|Ga0126371_13887019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	503	Open in IMG/M
3300025898\|Ga0207692_10156567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300025915\|Ga0207693_10502043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	947	Open in IMG/M
3300025922\|Ga0207646_10094689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2675	Open in IMG/M
3300025928\|Ga0207700_10310733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300025929\|Ga0207664_10594132	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300025929\|Ga0207664_10829896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300025934\|Ga0207686_11610125	Not Available	536	Open in IMG/M
3300025939\|Ga0207665_10558315	Not Available	890	Open in IMG/M
3300026142\|Ga0207698_10043350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3370	Open in IMG/M
3300026142\|Ga0207698_10497201	Not Available	1186	Open in IMG/M
3300026547\|Ga0209156_10116965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1311	Open in IMG/M
3300027497\|Ga0208199_1110155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	566	Open in IMG/M
3300027575\|Ga0209525_1116728	Not Available	625	Open in IMG/M
3300027903\|Ga0209488_10785683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	676	Open in IMG/M
3300027908\|Ga0209006_10296467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1381	Open in IMG/M
3300028782\|Ga0307306_10226658	Not Available	541	Open in IMG/M
3300028784\|Ga0307282_10444462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300028801\|Ga0302226_10118731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1167	Open in IMG/M
3300028824\|Ga0307310_10202280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	938	Open in IMG/M
3300028884\|Ga0307308_10096578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1406	Open in IMG/M
3300029943\|Ga0311340_10623565	Not Available	938	Open in IMG/M
3300030007\|Ga0311338_11483815	Not Available	626	Open in IMG/M
3300030494\|Ga0310037_10316366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	662	Open in IMG/M
3300030520\|Ga0311372_11635491	Not Available	782	Open in IMG/M
3300030706\|Ga0310039_10096443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1240	Open in IMG/M
3300030707\|Ga0310038_10457570	Not Available	545	Open in IMG/M
3300031236\|Ga0302324_101765457	Not Available	788	Open in IMG/M
3300031681\|Ga0318572_10559994	Not Available	681	Open in IMG/M
3300031682\|Ga0318560_10474983	Not Available	677	Open in IMG/M
3300031723\|Ga0318493_10289650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → unclassified Amycolatopsis → Amycolatopsis sp. FDAARGOS 1241	882	Open in IMG/M
3300031747\|Ga0318502_10585593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 203386	671	Open in IMG/M
3300031770\|Ga0318521_10723929	Not Available	605	Open in IMG/M
3300031779\|Ga0318566_10670823	Not Available	503	Open in IMG/M
3300031831\|Ga0318564_10314650	Not Available	690	Open in IMG/M
3300031833\|Ga0310917_10799049	Not Available	637	Open in IMG/M
3300031890\|Ga0306925_10741983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 203386	1024	Open in IMG/M
3300031896\|Ga0318551_10781497	Not Available	555	Open in IMG/M
3300031897\|Ga0318520_10223823	Not Available	1116	Open in IMG/M
3300031897\|Ga0318520_10892677	Not Available	559	Open in IMG/M
3300031945\|Ga0310913_10473861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300031954\|Ga0306926_10296058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2003	Open in IMG/M
3300032009\|Ga0318563_10201840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Herbiconiux → unclassified Herbiconiux → Herbiconiux sp. CPCC 203386	1072	Open in IMG/M
3300032052\|Ga0318506_10543201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	515	Open in IMG/M
3300032054\|Ga0318570_10009766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3298	Open in IMG/M
3300032054\|Ga0318570_10021594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2449	Open in IMG/M
3300032060\|Ga0318505_10441795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300032160\|Ga0311301_10198511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3447	Open in IMG/M
3300032160\|Ga0311301_10222531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3178	Open in IMG/M
3300032160\|Ga0311301_10867456	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1223	Open in IMG/M
3300032160\|Ga0311301_12824269	Not Available	529	Open in IMG/M
3300032261\|Ga0306920_100169712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3253	Open in IMG/M
3300032261\|Ga0306920_100698789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1495	Open in IMG/M
3300032828\|Ga0335080_11240545	Not Available	747	Open in IMG/M
3300032893\|Ga0335069_12080275	Not Available	597	Open in IMG/M
3300033134\|Ga0335073_10878198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300033290\|Ga0318519_10987175	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.60%
Host-Associated	Host-Associated	6.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.40%
Plants	Host-Associated → Plants	6.40%
Aquatic	Environmental → Aquatic	3.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.40%
Peat	Environmental → Terrestrial → Peat	4.00%
Freshwater	Environmental → Aquatic → Freshwater	3.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.40%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1068975301	3300000956	Soil	QTIPSEDPDYGDLGRAFPAWTGPARGAILQPPEPEIPPSPQILERMMDYDADWEAAD*
Ga0066675_110215341	3300005187	Soil	TFADKLADRQSQMIPSEDPDYNSLGPAFPAWSGPRREPILRPPKPEIPPSPRILERAMDRDADWEAAD*
Ga0070682_1017180351	3300005337	Corn Rhizosphere	LSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0070714_1005896352	3300005435	Agricultural Soil	MIPSEDPDYGDLGRAFPAWTGPGRESILRPPRPEIPPSPRILESVMDRDADWEAAD*
Ga0070714_1006275924	3300005435	Agricultural Soil	PSEDPDYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0070714_1014207502	3300005435	Agricultural Soil	DPDYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERAIDRDADFEAAD*
Ga0070714_1014497731	3300005435	Agricultural Soil	FADRLADRQSQMIPSEDLDYGDLSPAFPAWTRPGRAPILQPPKPEIPPSPRILERVIDRDADWEAAD*
Ga0070713_1010964453	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FADRLSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0070713_1024852101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FADRLSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0070710_110532592	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LADRQSLAIPSEDLDYGDLGQAFPTRTSPSRGPILQPPKPEIPPSRRVLQRMMDRDADREAAD*
Ga0070681_107263861	3300005458	Corn Rhizosphere	KIPSEDPDYGDLGQAFPAWSRASRGAILQPPKPEMTPSPRILQRAMDRDADWEAAD*
Ga0070679_1001403835	3300005530	Corn Rhizosphere	DPDYGDLGQAFPAWSRASRGAILQPPKPEMTPSPRILQRAMDRDADWEAAD*
Ga0068864_1014769372	3300005618	Switchgrass Rhizosphere	DRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0080026_100404252	3300005952	Permafrost Soil	VRRRRTVPSQDPGYGDLGLSFPAWTGPGRDAILQPPKPEIPPSPQLLQRVMHRETGWEAAD*
Ga0070717_104136932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VFASVMADRTDRQSQTIPSEDPDYGDLGQAFPSWRSPAREAILQPPMPEIPPSPQILQHATDRDADWEAAD*
Ga0070717_119501042	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LADRQSQAIPSDDPDYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERATDRDAGWEAAD*
Ga0070717_120404141	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ADRLSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0066696_104131752	3300006032	Soil	MIPSEDPDYNSLGPAFPAWSGPRREPILRPPKPEIPPSPRILERAMDRDADWEAAD*
Ga0070716_1013986013	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IPSEDPDYGDLGPAFPAWSGPPSGAILQPPKPEMTPSPQILQRAMDRDADWEAAD*
Ga0070712_1017352052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLSDRQSQMIPSEDPDYGDLGPAFPVWTRTGREPILRPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0070712_1017413641	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MADRTDRQSQTIPSEDPDYGDLGQAFPSWRSPAREAILQPPMPEIPPSPQILQHATDRDADWEAA
Ga0097621_1016302963	3300006237	Miscanthus Rhizosphere	RQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD
Ga0074054_117289442	3300006579	Soil	GHRTFAGQLADRQSQTVPSDDPDYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERATDRDADWEAAD*
Ga0079220_114222601	3300006806	Agricultural Soil	EDPDYGDLGQAFPALTSPGRGPILQPPKPEIPPSPRVLQRVMDRDADREAAD*
Ga0074063_134056371	3300006953	Soil	IPSEDPDYGDLGPAFPAWSGSPRGAILQPPKPEMTPSPQILQRAMDRDADWEAAD*
Ga0105242_108692593	3300009176	Miscanthus Rhizosphere	ADRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0105237_127099761	3300009545	Corn Rhizosphere	LARLVSRSGGEDPSDDPDYADLGPAFPAWTSPRREPILQPPRPEIPPSPRIFERVIDRDADWEAAD*
Ga0105238_126869871	3300009551	Corn Rhizosphere	PDHADLGPAFPAWTSPRREPILQPPMPEIPPSPQLLERAMDRAPDWEAAD*
Ga0116216_106300242	3300009698	Peatlands Soil	IPSQDPDYGDLGPAFPAWTGPGQDAILQPPKPEIPPSPQVLHRAADRDADYEAAE*
Ga0116219_101549202	3300009824	Peatlands Soil	IPSGDPDYGDLGPAFPAWTGPGKDAILQPPKPEIPPSPYILRRAADRDADREAAD*
Ga0116223_102583011	3300009839	Peatlands Soil	ERPNLRVPSQDPEYGDLGQAFPAWHAQARAAILQPPMPEIPPSPEILQRVMDRDADWEAAD*
Ga0126370_103195381	3300010358	Tropical Forest Soil	SVKIPSEDPDYGDLGPAFAARTSRGREPILQPPKPEIPPSPRILERVIDRDADWEAAD*
Ga0126376_124106832	3300010359	Tropical Forest Soil	MEVPSQDPDYGDLGQAFPAWSGPPRAAILQPPKPEMTPSPRILQHAMDRDSDWEAAD*
Ga0126372_105418691	3300010360	Tropical Forest Soil	PGYGDLGPPFHAWTGPPREAILQPPKPEIPPSPRILERVMDRDADWEVAD*
Ga0126372_122657952	3300010360	Tropical Forest Soil	DPDYGDLGQAFPAWSGPPRAAILQPPKPEMTPSPRILQHAMDRDSDWEAAD*
Ga0126379_103979142	3300010366	Tropical Forest Soil	MIPSEDPDYGDLGPAFPAWTRPGREPILQPPKPEIPPSPQILQRVMDRDADWEAAD*
Ga0134125_100201673	3300010371	Terrestrial Soil	VKIPSEDPDYGDLGQAFPAWSRASRGAILQPPKPEMTPSPRILQRAMDRDADWEAAD*
Ga0134125_104562073	3300010371	Terrestrial Soil	MIPSEDPDYGDLGPAFPAWTRPGRAPILQPPKPEIPPSPRILERVMDRDADWEAAD*
Ga0126381_1044867881	3300010376	Tropical Forest Soil	SENPDYGSLGPAFPAWSGPRREPILQPPKPEIPPSPRILERMMDRDADWEAAD*
Ga0136449_1001847291	3300010379	Peatlands Soil	NLRVPSQDPEYGDLGQAFPAWPAQARAAILQPPMPEIPPSPEILQRVMDRDADWEAAD*
Ga0134124_114442991	3300010397	Terrestrial Soil	MIPSEDPEYSDLGPAFPAWTSLGREPILQPPKPEIPPSPRILERAMHRDTDWEAAD*
Ga0134121_109503231	3300010401	Terrestrial Soil	LADRQSQTVPSEDPGYGDLGPAFPAWTSPRRQAILQPPMPEIPPSPRILERAMHRDTDWEAAD*
Ga0126359_11824082	3300010869	Boreal Forest Soil	ADRLADRQSLKIPSQDPDYGYLGPAFPAWPGPGHDAILQPPKPEIPPSPQILQRAAERDAGYEAAD*
Ga0137365_101075176	3300012201	Vadose Zone Soil	DRLANRQSQMIPSEGPDYGDLGPAFPTWTGPGREPILRPPRPEIPPSPRILEHVMDRDADWEAAD*
Ga0137365_102146511	3300012201	Vadose Zone Soil	FASRLADRQSQTVPSEDPDYGDLGPAFPAPTRPGRAPILQPPKPEIQPSLRILERVMDRDADWEPAD*
Ga0137384_103010592	3300012357	Vadose Zone Soil	PSEDPDYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERATDRDADFEAAD*
Ga0137384_112479511	3300012357	Vadose Zone Soil	PSEDPDYDDLGPAFPTWTGPGREPILRPPRPEIPPSPRILEHVMDRDADWEAAD*
Ga0137385_113883822	3300012359	Vadose Zone Soil	FAGQLADRQSQAVPSEDPGYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERVMDRDAGWEAAD*
Ga0164301_116288391	3300012960	Soil	LADRQSQTVPSEDPGYGDLGPAFPARTSPRKELILQPPMPEIPPSPRILERATDRDADWEAAD*
Ga0164307_111369211	3300012987	Soil	DRLSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD*
Ga0182036_101054582	3300016270	Soil	FADRLADRQSVKMPSEDPDYGDLGQAFPAWSGPPRVAILQPPKPEMPPSPRILQHAMDRDADWEAVD
Ga0182034_118487391	3300016371	Soil	SQMIPSEDPNYGSLGPAFPAWSGPRREPILQPPKPEIPPSPRILERMMDRDADWEAAD
Ga0182039_102268554	3300016422	Soil	TFADLLANRQSMKIPSKDPDYGDLGPAFPARTSREREPVLQPPKPEIPPSPRILQRVMDRDADWEAAD
Ga0187807_12796242	3300017926	Freshwater Sediment	DRQSQRIPSGDPDYGDLGPAFPAWTGPGQDAILQPPKPEIPPSPQVLQRAADRDADYEAA
Ga0187806_10753743	3300017928	Freshwater Sediment	LAERQSLMIPSQDPDYGDLGQAFPAWTGPGHEPILRPPKPDIRPSPQIRLRAADRDADLEAAD
Ga0187814_101814932	3300017932	Freshwater Sediment	VALADRHSLMIPSQDPDYGDLGPAFPPWPGPGKDAILQSPKPEIAPSPQVLHRAADRDADLEAAD
Ga0187879_100598962	3300017946	Peatland	VRIPAEDPDYGDLGQAFPAWTGPGKDAILQPPKPEIPPSPLVLQHAADRDADREAAD
Ga0187780_114463971	3300017973	Tropical Peatland	KLADRQSQMIPAEDPDYGDLGPAFPAWTGPGRMPILQAPKPEIPPSPRILQRAMNRDADWEAAD
Ga0066662_122887502	3300018468	Grasslands Soil	AIPSEDPDYGDLGQAFPAWTGPGRAPILRPPKPEIPPSPRVLQRVIDRDADREAAD
Ga0210399_108715431	3300020581	Soil	DRQSQMIPSEDPYYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDRDADWEAA
Ga0210405_103930653	3300021171	Soil	YGDLGRAFPAWTGPGRESILRPPRPEIPPCPRILERVMDRDADWEAAD
Ga0210408_109680472	3300021178	Soil	AVPSEDPDYGDLGPAFPAWASPRREPILQPPMPEIPPSPRILERAIDRDADWEAAD
Ga0210397_100923336	3300021403	Soil	EDPDYGDLGPALPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD
Ga0210392_108011901	3300021475	Soil	PDYADLGPAFPAWTSRGREPILQPPMPEIPPSPRILEQVMDRDIDWEAAD
Ga0210402_100412464	3300021478	Soil	MIPSEDPDYDSLGPAFPAWIGPRREPILRPPKPEIPPSPRLLEGMIDRDADWEAAD
Ga0210402_102597841	3300021478	Soil	SVKIPSEDPDYGDLGQAFPAWSRASRGAILQPPKPEMTPSPRILQRAMDRDADWEAAD
Ga0210402_112630671	3300021478	Soil	QAIPSEDPDYGDLGPAFPAWTGPGREPILQPPRPEIPPSPHILQRVIDRDADREAAD
Ga0210402_114060032	3300021478	Soil	DPVRGPDYGDLGRAFPAWTGPGRESILRPPRPEIPPSPRILERVMDRDADWEAAD
Ga0126371_138870191	3300021560	Tropical Forest Soil	RLADRQNMKIPSGDPDYDDLGLAFPAWTGRRKGPILQPPKPEIPPSPRILERVMDRDAGWEAAD
Ga0207692_101565671	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VFASVMADRTDRQSQTIPSEDPDYGDLGQAFPSWRSPAREAILQPPMPEIPPSPQILQHATDRDADWEAAE
Ga0207693_105020431	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YGNLGPAFPAWCGPRREPILQPPKPEIPPSPRILERVMDRDADWEAAE
Ga0207646_100946897	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIPSEDPDYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDCDADWEAAD
Ga0207700_103107331	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LARLVSRSGGEDPSDDPDYADLGPAFPAWTSPRREPILQPPRPEIPPSPRIFERVIDRDADWEAAD
Ga0207664_105941322	3300025929	Agricultural Soil	MIPSEDPDYGDLGRAFPAWTGPGRESILRPPRPEIPPSPRILESVMDRDADWEAAD
Ga0207664_108298961	3300025929	Agricultural Soil	SQAVPSDDPDYADLGPAFPAWTGPRRQPILQPPMPEIPPSPRILERVMDRDVDWEAAD
Ga0207686_116101252	3300025934	Miscanthus Rhizosphere	AGKLADRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILRPPVPEIPPSPRILERVTDRDADWEAAD
Ga0207665_105583151	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SQTVPSEDPGYGDLGPAFPAWTSPRREPILQPPMPEIPPSPRILERAADRDADWEAAD
Ga0207698_100433502	3300026142	Corn Rhizosphere	LARLVSRSGGEDPSDDPDYADLGPAFPAWTSPRREPILQPPRPEIPPSPRILERAIDRDTDWEAAD
Ga0207698_104972011	3300026142	Corn Rhizosphere	RTFADRLSDRQSQMIPSEDPDYGDLGPAFPVWTGPGREPILQPPVPEIPPSPRILERVTDRDADWEAAD
Ga0209156_101169651	3300026547	Soil	QTFADKLADRQSQMIPSEDPDYNSLGPAFPAWSGPRREPILRPPKPEIPPSPRILERAMDRDADWEAAD
Ga0208199_11101551	3300027497	Peatlands Soil	DKLANRQSQTIPSEDPHYGDLGPAFPAWTGPGKDAILQPPKPEILLSPQILEHVMDRDADWEAAD
Ga0209525_11167282	3300027575	Forest Soil	DRQSQMIPSEDPDYGDLGPAFPAWIGPGRAPILQPPKPEIPPSPRVLERVMDRDADWEAV
Ga0209488_107856832	3300027903	Vadose Zone Soil	LADRQSQAIPSQDPDYGNLGPAFPAWTGPGREPILQPPRPEIPPSPRILERAIDRDADWEAAD
Ga0209006_102964672	3300027908	Forest Soil	MIPSEDPDYGDLGPAFPAWIGPGRAPILQPPKPEIPPSPRVLERVMDRDADWEAVD
Ga0307306_102266582	3300028782	Soil	RQSQAIPSQDPDYGDLGPAFPAWIGPGREPILQPPKPEIPPLPRILERETDRDADWEAAD
Ga0307282_104444622	3300028784	Soil	SRAVPSEDPDYADLGPAFPAWISPRKEPILQPPMPEIPASPRILKRAMDRDVDWEAAD
Ga0302226_101187314	3300028801	Palsa	ADRQNLQIPAANPDYGDLGAAFPAWTGPGKDVILQPARPEIPPSPLLLERAAARDADREAADKQQPGDIPDVSG
Ga0307310_102022803	3300028824	Soil	LDYGDLGPAFPAWTRPGRAPILQPPKPEIPPSPRILERVIDRDADWEAAD
Ga0307308_100965782	3300028884	Soil	DRQSQAVPSDDPGYGDLGPAFPAWTSPRREPILQPPMPEIPPSPQILERMMDPDADWEAA
Ga0311340_106235653	3300029943	Palsa	QNPDHGDHGPAFPSWKGPSQDVILQPPKPEIPPSPQILHRAAERDADYEAGE
Ga0311338_114838152	3300030007	Palsa	SQKIPSQNPDHGDHGPAFPSWKGPSQDVILQPPKPEIPPSPQILHRAAERDADYEAGE
Ga0310037_103163661	3300030494	Peatlands Soil	IPSEDPHYGDLGPAFPAWTGPGKDAILQPPKPEILLSPQILEHVMDRDADWEAAD
Ga0311372_116354912	3300030520	Palsa	KIPSQNPDHGDHGPAFPSWKGPSQDVILQPPKPEIPPSPQILHRAAERDADYEAGE
Ga0310039_100964431	3300030706	Peatlands Soil	LADRQSLQIPSEDPDYGDLGPAFPAWTGPGQDAILQPPKPEIPPSPQVLQRAAARDADYEAAE
Ga0310038_104575702	3300030707	Peatlands Soil	LQIPSEDPDYGDLGPAFPTWTGPGQDAILQPPKPEIPPSPQVLQRAAARDADYEAAE
Ga0302324_1017654571	3300031236	Palsa	QQIPAENPDYGDLGPAFPAWTGPGQDAILQPPKPEIPPSPLVLHRAADRDADREAAD
Ga0318572_105599942	3300031681	Soil	EDPDYGDLGRAFPAWTGPGWEPILQPPKPEIPPSPHILERAMGRDADWEAAD
Ga0318560_104749831	3300031682	Soil	SEDPDYGNLGAAFPAWTGPGREPILQPPKPEIPPSQQILQRAMDRDADFEAAD
Ga0318493_102896503	3300031723	Soil	SQTIPSKDPDYGDLGPAFHAWTSSGQEPILQPPKPEIPPSPRILERAMDRDADWEAAD
Ga0318502_105855931	3300031747	Soil	QSQMIPSEDPDYGDLSPAFPAWTSPGREPILQPPMPEIPPSPQILQRAMDRDADWEAAD
Ga0318521_107239291	3300031770	Soil	QSQMILSEDPDYGNLGAAFPAWTGPGREPILQPPKPEIPPSQQILQRAMDRDADFEAAD
Ga0318566_106708231	3300031779	Soil	ERQSQMILSEDPDYGNLGAAFPAWTGPGREPILQPPKPEIPPSQQILQRAMDRDADFEAA
Ga0318564_103146502	3300031831	Soil	PDYGDLGRAFPAWTGPGWEPILQPPKPEIPPSPHILERAMGRDADWEAAD
Ga0310917_107990491	3300031833	Soil	ADRQSQMIPSEDPDYGDLSPAFPAWTSPGREPILQPPMPEIPPSPQILQRAMDRDADWEAAD
Ga0306925_107419832	3300031890	Soil	SQMIPSEDPDYGDLSPAFPAWTSPGREPILQPPMPEIPPSPQILQRAMDRDADWEAAD
Ga0318551_107814972	3300031896	Soil	MIPSEDPGYGDLGPAFPAWTGPARDAILQRPRPEIAPSPPILQRVMDRDADWEAAD
Ga0318520_102238232	3300031897	Soil	VDRLADRQSQTVPPEDPDYGDLGRAFPAWTGPGWEPILQPPKPEIPPSPHILERAMGRDADWEAAD
Ga0318520_108926771	3300031897	Soil	QSVKIPSEDPDYGDLGQAFPAGSGPLRAAILQPPKPKMTPSPRILQHAMDRDTDWEAAD
Ga0310913_104738611	3300031945	Soil	RQSQMIPSEDPDYGSLGPAFPAWSGPRREPILQPPKPEIPPSPRILERMMDRDADWEAAD
Ga0306926_102960584	3300031954	Soil	DPDYGSLGPAFPAWSGPRREPILQPPKPEIPPSPRILERMMDRDADWEAAD
Ga0318563_102018402	3300032009	Soil	DYGDLSPAFPAWTSPGREPILQPPMPEIPPSPQILQRAMDRDADWEAAD
Ga0318506_105432011	3300032052	Soil	GHRTFAGKLADRQGQMIPSEDPDYGDLGPAFPAWTRPGREPILQPPKPEIPPSPRILERAMDRDADWEAAD
Ga0318570_100097665	3300032054	Soil	DYGDLGPAFPAWTRPGREPILQPPKPEIPPSPQILRRVMDRDADWEAAD
Ga0318570_100215944	3300032054	Soil	SQTVPSEDPDYGDHGPAFPTWTSPGQEPILQRPKPEIPPSPRILEYATDRDADWEAAD
Ga0318505_104417952	3300032060	Soil	SQVIPSEDPDYGDLGPAFPAWTSPGREPILRPPKPEIPPSPQILERAMDRDADREAAD
Ga0311301_101985111	3300032160	Peatlands Soil	NLRVPSQDPEYGDLGQAFPAWPAQARAAILQPPMPEIPPSPEILQRVMDRDADWEAAD
Ga0311301_102225316	3300032160	Peatlands Soil	QSQMIPAEDPDYGDLGPAFPAWTGPGKDAILQPPKPEIPPSPYILQRAADRDADREAAD
Ga0311301_108674562	3300032160	Peatlands Soil	QSQMIPAEDPDYGDLGPAFPAWTGPGKDAILQPPKPEIPPSPHILQRAADRDADREAAD
Ga0311301_128242692	3300032160	Peatlands Soil	IPSQDPDYGDLGPAFPAWTGPGQDAILQPPKPEIPPSPQVLHRAADRDADYEAAE
Ga0306920_1001697121	3300032261	Soil	MIPSEDPDYGDLGPAFPAWTRPGREPILQPPKPEIPPSPQILRRVMDRDADWEAAD
Ga0306920_1006987891	3300032261	Soil	PSEDPDYGDPGPALPAWTGLGREPILQPPKPEIPPSPRILERAMDRDTDWEAAD
Ga0335080_112405451	3300032828	Soil	FVDRLADRQNVKIPSEDPDYGDLGQALPAWSGPPRAAILQPPKPEMTPSPRILHRTMDRDADWEAAD
Ga0335069_120802752	3300032893	Soil	YGDLGPAFPAWTGPGQDAILQPPKPEITPSPRILQRAMDRDPDWEAAD
Ga0335073_108781983	3300033134	Soil	TRLADRHSQMMPSEDPDYGDLGPAFPAWTGSSWEPILQPPKPEIPPSPRILQRVMDRDVDWEAAD
Ga0318519_109871751	3300033290	Soil	SVKIPSEDPDYGDLGQAFPAGSGPLRAAILQPPKPKMTPSPRILQHAMDRDTDWEAAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences