Metagenome / Metatranscriptome Family F068020

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068020
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	74 residues
Representative Sequence	MAYEYPSAAGTVRLIQVQGRWLLHFAGRRSGRWCSPDEAARAVARHRSGLAAWDRRRVEAPEDLLDWRPLGESL
Number of Associated Samples	98
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.40 %
% of genes near scaffold ends (potentially truncated)	32.00 %
% of genes from short scaffolds (< 2000 bps)	86.40 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.600 % of family members)
Environment Ontology (ENVO)	Unclassified (24.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.69% β-sheet: 28.43% Coil/Unstructured: 55.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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SCOP family	SCOP domain	Representative PDB	TM-score
b.29.1.18: Alginate lyase	d1vava_	1vav	0.57397
d.18.1.4: Guide RNA binding protein gBP	d2giaa1	2gia	0.56063
d.347.1.1: Acetoacetate decarboxylase-like	d3c8wa1	3c8w	0.55726
b.68.1.1: Sialidases (neuraminidases)	d6jjma1	6jjm	0.55256
b.68.7.1: Tricorn protease N-terminal domain	d1k32a2	1k32	0.55164

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00224	PK	12.00
PF11755	DUF3311	4.00
PF13483	Lactamase_B_3	3.20
PF00656	Peptidase_C14	2.40
PF00474	SSF	2.40
PF00584	SecE	2.40
PF07969	Amidohydro_3	1.60
PF13403	Hint_2	1.60
PF03480	DctP	1.60
PF04879	Molybdop_Fe4S4	1.60
PF11695	DUF3291	0.80
PF13407	Peripla_BP_4	0.80
PF04185	Phosphoesterase	0.80
PF02687	FtsX	0.80
PF00330	Aconitase	0.80
PF04828	GFA	0.80
PF14347	DUF4399	0.80
PF00528	BPD_transp_1	0.80
PF00230	MIP	0.80
PF01609	DDE_Tnp_1	0.80
PF02646	RmuC	0.80
PF00892	EamA	0.80
PF03781	FGE-sulfatase	0.80
PF00175	NAD_binding_1	0.80
PF13458	Peripla_BP_6	0.80
PF00989	PAS	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	12.00
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	2.40
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	2.40
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	2.40
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.80
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.80
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.80
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.80
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.80
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.80
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.80
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.80 %
Unclassified	root	N/A	31.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.80 %
Unclassified	root	N/A	31.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.00 %
Unclassified	root	N/A	31.20 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.40 %
Unclassified	root	N/A	31.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.80 %
Unclassified	root	N/A	31.20 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.60 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.40 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.60 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.80 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.20 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.60 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.60 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.80 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Methylococcales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis	0.80 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.80 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Nioella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Nioella	1.60 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.60 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.60 %
Peptoniphilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae	0.80 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Candidatus Methylumidiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus	0.80 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Nioella nitratireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Nioella → Nioella nitratireducens	1.60 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.60 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.60 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	0.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.80 %
unclassified Belnapia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia	0.80 %
Peptoniphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Peptoniphilus	0.80 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.20 %
Rhizobium cellulosilyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium cellulosilyticum	1.60 %
Nioella nitratireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Nioella → Nioella nitratireducens	1.60 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.60 %
Belnapia sp. F-4-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-1	0.80 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.80 %
Peptoniphilus ivorii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Peptoniphilus → Peptoniphilus ivorii	0.80 %
Candidatus Methylumidiphilus alinenensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	0.80 %
Rhodospirillales bacterium 69-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	0.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.80 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459020\|G1P06HT02IGD01	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300001527\|A3513AW1_1595728	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300004092\|Ga0062389_102874126	Not Available	643	Open in IMG/M
3300005331\|Ga0070670_100403901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300005367\|Ga0070667_102317574	Not Available	506	Open in IMG/M
3300005435\|Ga0070714_101573073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300005436\|Ga0070713_100012626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6206	Open in IMG/M
3300005436\|Ga0070713_102115058	Not Available	546	Open in IMG/M
3300005439\|Ga0070711_100200929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1538	Open in IMG/M
3300005439\|Ga0070711_100596950	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300005439\|Ga0070711_101413344	Not Available	606	Open in IMG/M
3300005439\|Ga0070711_102005674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300005533\|Ga0070734_10093423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1770	Open in IMG/M
3300005534\|Ga0070735_10001514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22422	Open in IMG/M
3300005537\|Ga0070730_10003262	All Organisms → cellular organisms → Bacteria	14618	Open in IMG/M
3300005541\|Ga0070733_10069920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2211	Open in IMG/M
3300005541\|Ga0070733_10464284	Not Available	846	Open in IMG/M
3300005548\|Ga0070665_100046464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4362	Open in IMG/M
3300005563\|Ga0068855_102446454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Nioella → Nioella nitratireducens	520	Open in IMG/M
3300005614\|Ga0068856_100233139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1856	Open in IMG/M
3300005614\|Ga0068856_100769761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	982	Open in IMG/M
3300006028\|Ga0070717_10204576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium cellulosilyticum	1730	Open in IMG/M
3300006052\|Ga0075029_100685764	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300006059\|Ga0075017_101605221	Not Available	513	Open in IMG/M
3300006174\|Ga0075014_100551805	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300006175\|Ga0070712_100423257	Not Available	1104	Open in IMG/M
3300006579\|Ga0074054_10618235	All Organisms → cellular organisms → Eukaryota → Opisthokonta	568	Open in IMG/M
3300006755\|Ga0079222_12124769	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006806\|Ga0079220_10103152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1484	Open in IMG/M
3300006893\|Ga0073928_10615612	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009137\|Ga0066709_102009804	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300010048\|Ga0126373_12873779	Not Available	537	Open in IMG/M
3300010361\|Ga0126378_10166644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	2258	Open in IMG/M
3300010361\|Ga0126378_12112528	Not Available	642	Open in IMG/M
3300010375\|Ga0105239_10561027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300010376\|Ga0126381_100199963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2671	Open in IMG/M
3300010376\|Ga0126381_100669340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcales incertae sedis → Candidatus Methylumidiphilus → Candidatus Methylumidiphilus alinenensis	1482	Open in IMG/M
3300010376\|Ga0126381_100715206	Not Available	1433	Open in IMG/M
3300010376\|Ga0126381_104653596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300010379\|Ga0136449_101473901	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300010379\|Ga0136449_103694026	Not Available	578	Open in IMG/M
3300012201\|Ga0137365_11240697	Not Available	531	Open in IMG/M
3300012212\|Ga0150985_112302008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300012212\|Ga0150985_114779425	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012985\|Ga0164308_11078914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Peptoniphilaceae → Peptoniphilus → Peptoniphilus ivorii	718	Open in IMG/M
3300012987\|Ga0164307_10513360	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300013306\|Ga0163162_10657394	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300013306\|Ga0163162_11020462	Not Available	936	Open in IMG/M
3300014156\|Ga0181518_10358274	Not Available	713	Open in IMG/M
3300014164\|Ga0181532_10488515	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300014325\|Ga0163163_10964574	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300014501\|Ga0182024_10576118	All Organisms → cellular organisms → Bacteria → Proteobacteria	1415	Open in IMG/M
3300014501\|Ga0182024_11888909	Not Available	664	Open in IMG/M
3300014501\|Ga0182024_12826306	Not Available	516	Open in IMG/M
3300016357\|Ga0182032_10934942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300016387\|Ga0182040_10778532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300016404\|Ga0182037_10644650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 69-11	902	Open in IMG/M
3300018085\|Ga0187772_10392508	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300018469\|Ga0190270_10373618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1307	Open in IMG/M
3300020579\|Ga0210407_10102298	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300020582\|Ga0210395_10003742	All Organisms → cellular organisms → Bacteria → Proteobacteria	11676	Open in IMG/M
3300020582\|Ga0210395_11252840	Not Available	544	Open in IMG/M
3300020583\|Ga0210401_10635080	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300021178\|Ga0210408_10382595	Not Available	1121	Open in IMG/M
3300021372\|Ga0213877_10140205	Not Available	758	Open in IMG/M
3300021401\|Ga0210393_10958828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300021403\|Ga0210397_10497814	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300021420\|Ga0210394_10511583	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300021477\|Ga0210398_10004880	All Organisms → cellular organisms → Bacteria → Proteobacteria	12529	Open in IMG/M
3300021477\|Ga0210398_11219942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300021560\|Ga0126371_10835770	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300021560\|Ga0126371_12609750	Not Available	612	Open in IMG/M
3300021860\|Ga0213851_1667975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300022467\|Ga0224712_10254821	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300022530\|Ga0242658_1191107	Not Available	552	Open in IMG/M
3300025903\|Ga0207680_11104537	Not Available	567	Open in IMG/M
3300025915\|Ga0207693_10537050	Not Available	912	Open in IMG/M
3300025916\|Ga0207663_11330443	Not Available	579	Open in IMG/M
3300025928\|Ga0207700_10007851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6562	Open in IMG/M
3300025928\|Ga0207700_11777252	Not Available	542	Open in IMG/M
3300025945\|Ga0207679_11764839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	566	Open in IMG/M
3300026035\|Ga0207703_10312213	Not Available	1437	Open in IMG/M
3300026078\|Ga0207702_10391806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1338	Open in IMG/M
3300026116\|Ga0207674_11371930	Not Available	676	Open in IMG/M
3300027761\|Ga0209462_10102847	Not Available	649	Open in IMG/M
3300027765\|Ga0209073_10189142	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300027824\|Ga0209040_10125302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300027826\|Ga0209060_10074783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium cellulosilyticum	1603	Open in IMG/M
3300027857\|Ga0209166_10029187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3363	Open in IMG/M
3300027867\|Ga0209167_10133201	Not Available	1294	Open in IMG/M
3300027905\|Ga0209415_10136402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2524	Open in IMG/M
3300027905\|Ga0209415_11066702	Not Available	529	Open in IMG/M
3300027908\|Ga0209006_10278946	Not Available	1432	Open in IMG/M
3300027986\|Ga0209168_10266417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Nioella → Nioella nitratireducens	846	Open in IMG/M
3300029945\|Ga0311330_11325654	Not Available	516	Open in IMG/M
3300030520\|Ga0311372_10959405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1137	Open in IMG/M
3300030520\|Ga0311372_12208935	Not Available	633	Open in IMG/M
3300031057\|Ga0170834_105348048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300031546\|Ga0318538_10774576	Not Available	521	Open in IMG/M
3300031679\|Ga0318561_10586456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300031799\|Ga0318565_10440637	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031890\|Ga0306925_11154518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300031941\|Ga0310912_10993695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	644	Open in IMG/M
3300031942\|Ga0310916_11241725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300032008\|Ga0318562_10661838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300032008\|Ga0318562_10878040	Not Available	512	Open in IMG/M
3300032009\|Ga0318563_10123687	Not Available	1379	Open in IMG/M
3300032009\|Ga0318563_10386493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300032067\|Ga0318524_10330070	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300032160\|Ga0311301_12112402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → unclassified Belnapia → Belnapia sp. F-4-1	651	Open in IMG/M
3300032261\|Ga0306920_100087078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4605	Open in IMG/M
3300032805\|Ga0335078_10185082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2910	Open in IMG/M
3300032805\|Ga0335078_10498356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1566	Open in IMG/M
3300032892\|Ga0335081_10517858	Not Available	1495	Open in IMG/M
3300032893\|Ga0335069_11430446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300032895\|Ga0335074_10297999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1845	Open in IMG/M
3300032897\|Ga0335071_12084632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300032898\|Ga0335072_10719285	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300032898\|Ga0335072_11341827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300033134\|Ga0335073_10047720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	5747	Open in IMG/M
3300033134\|Ga0335073_10343405	All Organisms → cellular organisms → Bacteria → Proteobacteria	1772	Open in IMG/M
3300033158\|Ga0335077_11493445	Not Available	647	Open in IMG/M
3300033158\|Ga0335077_11602985	Not Available	619	Open in IMG/M
3300033289\|Ga0310914_11343698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300033475\|Ga0310811_10026713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	7671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.80%
Host-Associated	Host-Associated	14.40%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.60%
Plants	Host-Associated → Plants	14.40%
Aquatic	Environmental → Aquatic	7.20%
Solid Waste	Engineered → Solid Waste	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.80%
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Sediment	Environmental → Aquatic → Sediment	2.40%
Peat	Environmental → Terrestrial → Peat	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.80%
Roots	Host-Associated → Plants → Roots	0.80%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.80%
Grass	Engineered → Solid Waste → Grass	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.80%
Loam	Environmental → Terrestrial → Soil → Loam	11.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.80%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.80%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.80%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.80%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459020	Litter degradation NP2	Engineered	Open in IMG/M
3300001527	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2NP_01823740	2170459020	Switchgrass, Maize And Mischanthus Litter	MAYEYPSTAGVVHLIRADGRWLLHFQGQRAGRWPSPDLAARAVARHRSGLSAWDRRRVDAPEDLLDWRPLGESL
A3513AW1_15957281	3300001527	Permafrost	MAYEYPSAAGTLRLFRVQRRWLLHFAGRHAGGWRSPDVAVKAVAGHRSGLAEWDRQRIEAPDDLLDWRPLGDSL*
Ga0062389_1028741262	3300004092	Bog Forest Soil	MPYEYPSAAGVLRLMKVRGHWLLHFAGRQSGRWPTPAAAVKAVAEHQSGLAEWDRQREPAPED
Ga0070670_1004039011	3300005331	Switchgrass Rhizosphere	MAYEYPSVAGTVRLVEEKGRWLLYFDGRRHGQWGSPDQAAAAVARHRSGLLLWDDKRVDAPEDLLDWRPLGGSL*
Ga0070667_1023175741	3300005367	Switchgrass Rhizosphere	MAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPED
Ga0070714_1015730731	3300005435	Agricultural Soil	LSMAYEYSSVAGTVRLVEEKGRWLLHFAGRRHGQWRSPDQAASAVARHRSGLPLWDRKRADAPEDLLDWRPLGGSL*
Ga0070713_1000126265	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYSSIAGTVRLVEEKGRWLLHFAGRRHGQWRSPDQAASAVARHRSGLPLWDRKRADSPEDLLDWRPLGGSL*
Ga0070713_1021150582	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYPSDAGTLWLMRDGRRWLVQFAGRLSGPWPSPDVAAKAVARHQSGLRDWDRRRADAPEDLLDWRPLGESL*
Ga0070711_1002009292	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYSSVAGTVRLVEEKGRWLLHFAGQRHGQWRSPDQAASAVARHRSGLPLWDRKRADAPEDLLDWRPLGGSL*
Ga0070711_1005969502	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0070711_1014133441	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYPSDAGTLWLMRDGRRWLVQFAGRLSGPWPSPDVAAKAVARHQSGLRDWDRRRADA
Ga0070711_1020056742	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIRSEGTAPGMAYEYPSAAGVLHLMKVQGRWLVHFAGRRSGRWPSPDLAAKAVARHQSGLAEWDLKRADAPDDLLDWRPLGDSL*
Ga0070734_100934232	3300005533	Surface Soil	MAYEYPSAAGTVRLIQVGGRWLLHFAGRNSGRWTTPDVAAKAVSQHRSGHTGWDRRRAEAPEDLLDWRPLGDSL*
Ga0070735_100015145	3300005534	Surface Soil	MVAGHRLAMAYEYPSTAGVVQLIRANGRWLLRFQGRRAGRWPSPDQAARAVARHQSGLSAWDCCRLDAPEDLLDWRPLGDSL*
Ga0070730_1000326217	3300005537	Surface Soil	MQVQGGAVTGHRLAMAYEYPSTAGVVQLFRANGRWLFRFQGQRAGRWPSPDQAARAVARHQSGLSAWDHSCLDAPEDLLDWRPLGDSL*
Ga0070733_100699204	3300005541	Surface Soil	MAYEYPSPAGVVQLVQTGGRWLLHFDGQRSGRWPSPDVAARAVARHQSGLSAWDRRRLDAPEDLLDWRPLGDSL*
Ga0070733_104642842	3300005541	Surface Soil	MAYEYPSPAGVVQLIRTRGHWLLHFDGQRSGRWPSPDLAARAVSTHQSGLSAWDHRRLEAPEDLLDWRPLGDSL*
Ga0070665_1000464642	3300005548	Switchgrass Rhizosphere	MAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSDLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0068855_1024464542	3300005563	Corn Rhizosphere	VRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVVRHRSDLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0068856_1002331393	3300005614	Corn Rhizosphere	MAYEYSSAAGTLHSVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLPQWDEKRADAPEDLLHWRPLGASL*
Ga0068856_1007697611	3300005614	Corn Rhizosphere	MAYEYPSVAGTVRLVEEKGRWLLYFDGRRHGQWGSPDQAAAAVARHRSGLPLWDDKRVDAPEDLLDWRPLGGSL*
Ga0070717_102045763	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEFPSAAGTLRLFCVQRRWLLHFAGRHAGGWRSPDVAVKAVARHQSGLEEWDRQRIEAPDDLLDWRPLGDSL*
Ga0075029_1006857641	3300006052	Watersheds	AYEYPSAAGAVRLIQIRGKWLLHFAGRRSGRWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGESL*
Ga0075017_1016052211	3300006059	Watersheds	MAYEYPTTAGILRLIEVQGRWLLHFADRRSGRWPSPDMAAKAVARHQSGLTEWDRHWDEAPEDLVDWRPLGDSL*
Ga0075014_1005518051	3300006174	Watersheds	APGSALRMAYEYPSAAGTVRLIQVQGRWLLHFAGRRSGRWCSPDEAARAVARHRSGLAAWDRRRVEAPEDLLDWRPLGESL*
Ga0070712_1004232571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AAGVLQIMQVHGRWLVRFAGRRSGGWPSPDQAAKAVARHQSGLAAWDRKLAEAPDDLLDWRPLGDSL*
Ga0074054_106182351	3300006579	Soil	VASVMAYEYPSAAGTVRLIQVQGRWLLHFSGRRSGRWPSPDMAARAVARHQSGLAAWDRQRIEAPEDLLDWRPLGESL*
Ga0079222_121247691	3300006755	Agricultural Soil	RDACSMAYEYPSVAGTLRLVEEKGHWLLYFDGCRHGQWGSPDQAATAVARHRSGLPLWDDKRVDAPEDLLDWRPLGGSL*
Ga0079220_101031523	3300006806	Agricultural Soil	MAYEYSSAAGTLHLVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLPQWDEKRADAPEDLLHWRPLGASL*
Ga0073928_106156121	3300006893	Iron-Sulfur Acid Spring	MAYEYPSTAGTVRLIQVQGRWLLHFAGRRSGRWASPDVAARAVAQHQSGLAAWDRRRIEAPEDLLDWRPLGE
Ga0066709_1020098041	3300009137	Grasslands Soil	MAYEYPSAAGVLRLMQIRGRWHVHFAGRSTGRWSSPEVAAQAVARHRSGLEQWDRKRVYAPADLLDWRPLG
Ga0126373_128737792	3300010048	Tropical Forest Soil	MPYEFPAEAGLLRLTKERGRWLLHFGGRQAGGWRSPETAVKAVARRKSGLAEWDRKGDWA
Ga0126378_101666442	3300010361	Tropical Forest Soil	MAYEYPSTAGAVRLVQVRGKWLLHFAGRRSGRWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGDSL*
Ga0126378_121125282	3300010361	Tropical Forest Soil	MPYEYPAAAGLLRLSKQRGRWLLHFAGRQAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL*
Ga0105239_105610271	3300010375	Corn Rhizosphere	PADMAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSDLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0126381_1001999632	3300010376	Tropical Forest Soil	MAGTDRLIQVGDLWPLYYAGHRSGNWPSPDVAAKAVARHQSGLAAWDRRRGEAPEDLLDWRPLGDSV*
Ga0126381_1006693402	3300010376	Tropical Forest Soil	MAYEYPTTAGIVRLVQVQGRWLLHFEGRHAGSFPSADAAAKAVARHRSGLAVWDQRKIDAPEDLLDWRPLGESL*
Ga0126381_1007152062	3300010376	Tropical Forest Soil	IGTIPAGEEQAGKPLRMGYEYPSSAGTVLLVKSRGRWMLHFAGRHTGRWPSADSAARAVARHQSGLGEWDRRRIEAPEDLLDWRPLGESL*
Ga0126381_1046535961	3300010376	Tropical Forest Soil	YEYPSVAGMVSLVHIQDHWALHFAGHVCGRWSSPDIAARAVARHQSGLADWDRRRLEAPEDLLDWRPLGESL*
Ga0136449_1014739012	3300010379	Peatlands Soil	MAYEFPSAAGTLRLSRVQRRWLLHFAGRHAGGWRSPDIAVKAVARHRSGLADWDRQRVEAPEDLLDWRPLGDSL*
Ga0136449_1036940261	3300010379	Peatlands Soil	MAYEYPSAAGVLRLTKVRGRWLLHFAGRRSGPWPSPDVAAKAVAQHQSGLSEWDRRREGVPEDLLDWRPLGDSL*
Ga0137365_112406972	3300012201	Vadose Zone Soil	MAYEFPSAAGTLRLVRVHGRWLLHFGGRRSGRWSSPDMAVKAVAQHQSGLPEWDRKRIEAPDDVLDWRPLGESL*
Ga0150985_1123020081	3300012212	Avena Fatua Rhizosphere	KGDACSMAYEYPSVAGTVRLVEEKGRWLLYFDGRRHGQWGSPDQAAAAVARHRSGLLLWDDKRVDAPEDLLDWRPLGGSL*
Ga0150985_1147794252	3300012212	Avena Fatua Rhizosphere	ASSMAYEYPSAAGTVRLIQFQGRWLLHFAGRRSGRWPSPDVAARAVARHQSGLAAWDRQQIEAPEDLLDWRPLGESL*
Ga0164308_110789141	3300012985	Soil	RLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0164307_105133601	3300012987	Soil	MIVIRGAPADMAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0163162_106573942	3300013306	Switchgrass Rhizosphere	MIVIRGPPADMAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0163162_110204623	3300013306	Switchgrass Rhizosphere	MAYEFPSEAGTVRLVEDRGHWLLLFAGRRCGRWQSPDLAARAVARHQSGLPNWDHQQVEAPEDLLDWRPLGNSL*
Ga0181518_103582741	3300014156	Bog	MAYEYPSAAGVLRLTKVRGRWLLHFAGRRSGRWPSPEVAAKVVAQHQSGLAEWDRQRDAAPEDLLDWRPLGDSL*
Ga0181532_104885152	3300014164	Bog	MAYEYPSAAGVLRLTKVRGRWLLHFAGRRSGRWPSPDEAAKAVAQHQSGLSEWDRRREGVPEDLLDWRPLGDSL*
Ga0163163_109645742	3300014325	Switchgrass Rhizosphere	MIVIRGAPADMAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSDLAVWDRRRGDAPEDLRDWRPLGESL*
Ga0182024_105761181	3300014501	Permafrost	MAYEYPSAAGVLRLMKVRGRWLMHYAGRRSGAWSSPDAAAKAAAQHRSGLSEWDQRHEGAPEDLLDWRPLGDSL*
Ga0182024_118889092	3300014501	Permafrost	MAYEYPSAAGVLRLMKVRGRWLMHFGGRRSGGWPSPDAAAKAAAQHRSGLSEWDRHQEGVPEDLLDWRPLGDSL*
Ga0182024_128263062	3300014501	Permafrost	MAYEYPSAAGVLRLTKARGRWLVHYAGRRSGGWPSPDVAAKAVAQHQSGLSEWDRQLEAIPDDLLDWRPLGDSL*
Ga0182032_109349421	3300016357	Soil	STAGTVRLHQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRKQADAPEDLLDWRPLGDSL
Ga0182040_107785322	3300016387	Soil	MPYEYPAAAGLLRLSKQRGRWLLHFAGRQAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL
Ga0182037_106446501	3300016404	Soil	MAYEYPTTAGIVRLVQVQGRWLLHFEGRHAGSFPSADAAAKAVARHRSGLAVWDQRKIDAPEDLLDWRPLGDSL
Ga0187772_103925082	3300018085	Tropical Peatland	MPYEYPAEAGLLRLSRERGRWLLHFAGRRAGGWRSAESAAKAVARRKSGHPEWDRQGDWAPEDLLDWRPLGDSL
Ga0190270_103736182	3300018469	Soil	MAYEYPSSAGLLQLTKVEGRWLVHFAGRRSGRWTSPELAAKAVAHHRSGLSEWDRQRLEAPDDLLDWRPLGDSL
Ga0210407_101022981	3300020579	Soil	MAYEYPTTAGILRLIEDRGRWLLHFADHRSGRWPSPDMAAKAVAQHRSGLPEWDRHWDEAPEDLLDWRPLGDSL
Ga0210395_100037428	3300020582	Soil	MAYEYPSAAGTLRLFHVQGRWLLHFAGRRAGGWRSPDVAVKAVARHRSGLADWDRRRIEAPDDLLDWRPLGDSL
Ga0210395_112528401	3300020582	Soil	VILIGMIRTIGATGTHLATPMAYEYPSEAGVVQLVQARGRWVLHFEGQRSGLWTSPDQAARAVARHQSGLSAWDRRKLDAPEDLLDWRPLGKSL
Ga0210401_106350802	3300020583	Soil	MAYEYPSPAGVVQLVQTGGRWLLHFDGQRSGRWPSPDVAARAVARHQSGLSAWDRRRLDAPEDLLDWRPLGDSL
Ga0210408_103825951	3300021178	Soil	MAYEYPTTAGILRLIEDRGRWLLHFADHRSGRWPSPDMAAKAVAQHRSGLPEWDRHWDEAPEDLLDWRP
Ga0213877_101402051	3300021372	Bulk Soil	LLMAYEYPTTAGTVLLVQKHGCWVLHFAGHRAGRWPSADLAAKAIARHRSGLDDWDRRHLEAPEDLLEWRPLGDSL
Ga0210393_109588281	3300021401	Soil	EYPSTAGVVQLFRANGRWLFRFQGQRAGRWPSPDQAARAVARHQSGLSAWDHSPLDAPEDLLDWRPLGDSL
Ga0210397_104978142	3300021403	Soil	MAYEFPSAAGTLRLFRVQRRWLLHFAGRHAGGWRSPDVAVKAVARHQSGLEEWDRQRIEAPDDLLDWRPLGDSL
Ga0210394_105115834	3300021420	Soil	MAYEYPSAAGTLRLFHVQGRWLLHFAGRRAGGWRSPDVAVKAVARHRSGLADWDRRRIEAPDDLLDWRP
Ga0210398_1000488013	3300021477	Soil	MAYEYPSAAGTLRLFHVQGRWLLHFAGRRAGGWRSPDVAVKAVARHRSGLADWDRQRIEAPEDLLDWRPLGDSL
Ga0210398_112199422	3300021477	Soil	PSAAGVLQIMQVHGRWLVRFAGRRSGGWPSPDQAAKAVARHQSGLAAWDRKLAEAPDDLLDWRPLGDSL
Ga0126371_108357701	3300021560	Tropical Forest Soil	MPYEFPAEAGLLRLTKERGRWLLHFGGRQAGGWRSPETAVKAVARRKSGLAEWDRKGDWAPEDLLDWRPLGDSL
Ga0126371_126097502	3300021560	Tropical Forest Soil	MAYEYPSTAGAVRLVQVRGKWLLHFAGRRSARWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGESL
Ga0213851_16679752	3300021860	Watersheds	MAYEYPSAAGTVRLIQVQGRWLLHFAGRRSGRWCSPDEAARAVARHRSGLAAWDRRRVEAPEDLLDWRPLGESL
Ga0224712_102548213	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	SSAAGTLHLVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLPQWDEKRADAPEDLLHWRPLGASL
Ga0242658_11911071	3300022530	Soil	TTAGILRLIEVQGRWLLHFADRRSGRWPSPDVAARAVARHKSGLPEWDRHWDEAPDDLLDWRPLGDSL
Ga0207680_111045372	3300025903	Switchgrass Rhizosphere	MAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSGLAVWDRRRGDAPEDLRDWRPLGESL
Ga0207693_105370502	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AGVLQIMQVHGRWLVRFAGRRSGGWPSPDQAAKAVARHQSGLAAWDRKLAEAPDDLLDWRPLGDSL
Ga0207663_113304432	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYSSVAGTVRLVEEKGRWLLHFAGQRHGQWRSPDQAASAVARHRSGLPLWDRKRADAPEDLLDWRPLGGSL
Ga0207700_100078514	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYSSIAGTVRLVEEKGRWLLHFAGRRHGQWRSPDQAASAVARHRSGLPLWDRKRADSPEDLLDWRPLGGSL
Ga0207700_117772522	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAYEYPSDAGTLWLMRDGRRWLVQFAGRLSGPWPSPDVAAKAVARHQSGLRDWDRRRADAPEDLLDWRPLGESL
Ga0207679_117648392	3300025945	Corn Rhizosphere	HLVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLPQWDEKRADAPEDLLHWRPLGASL
Ga0207703_103122131	3300026035	Switchgrass Rhizosphere	DMAYEYPSMAGTVRLVQVAGHWLLHFAGRRSGNWPSPDLAARVVARHRSDLAVWDRRRGDAPEDLRDWRPLGESL
Ga0207702_103918062	3300026078	Corn Rhizosphere	MAYEYPSVAGTVRLVEEKGRWLLYFDGRRHGQWGSPDQAAAAVARHRSGLPLWDDKRVDAPEDLLDWRPLGGSL
Ga0207674_113719302	3300026116	Corn Rhizosphere	MAYEYSSAAGTLHLVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLPQWDEKRADAPEDLLHWRPLGASL
Ga0209462_101028472	3300027761	Agave	VYEYPCAVGTLRLVEDHGRWLLHFAGRRAGHWASPELAAQAVAEHRSGLASWDHRQLDAPADLLDWRPLGESL
Ga0209073_101891422	3300027765	Agricultural Soil	MAYEYSSAAGTLHLVEYNGRWLLYFAGRRHGGWRSPDQAAFAVAQHRSGLQQWDEKRADAPEDLLHWRPLGASL
Ga0209040_101253022	3300027824	Bog Forest Soil	MAYEYPSAAGAVHLIQVRGKWLLHFAGRRSGRWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGESL
Ga0209060_100747832	3300027826	Surface Soil	MAYEYPSAAGTVRLIQVGGRWLLHFAGRNSGRWTTPDVAAKAVSQHRSGHTGWDRRRAEAPEDLLDWRPLGDSL
Ga0209166_100291876	3300027857	Surface Soil	MAYEYPSTAGVVQLFRANGRWLFRFQGQRAGRWPSPDQAARAVARHQSGLSAWDHSCLDAPEDLLDWRPLGDSL
Ga0209167_101332011	3300027867	Surface Soil	MAYEYPSPAGVVQLIRTRGHWLLHFDGQRSGRWPSPDLAARAVSTHQSGLSAWDHRRLEAPEDLLDWRPLGDSL
Ga0209415_101364023	3300027905	Peatlands Soil	MAYEYPSAAGVLRLTKVRGRWLVHFAGRRSGRWPSPEVAAKAVAQHQSGLAEWDRQRDAAPEDLLDWRPLGDSL
Ga0209415_110667021	3300027905	Peatlands Soil	PPMAYEYPSAAGVLRLTKVRGRWLLHFAGRRSGPWPSPDVAAKAVAQHQSGLSEWDRRREGVPEDLLDWRPLGDSL
Ga0209006_102789462	3300027908	Forest Soil	MAYEYPTATGILRLINVQGRWLVHFADRRSGRWPSPDMAAKAVARHQTGLPAWDRHWDEAPEDLLDWRPLGDSL
Ga0209168_102664171	3300027986	Surface Soil	MVAGHRLAMAYEYPSTAGVVQLIRANGRWLLRFQGRRAGRWPSPDQAARAVARHQSGLSAWDCCRLDAPEDLLDWRPLGDSL
Ga0311330_113256541	3300029945	Bog	MAYEYPSDAGILRLTKVRRRWLLHFEGNRLGRWPSADAAAKATAQHETGLSDWDEIYTDAPEDLLDWRPLGDSL
Ga0311372_109594052	3300030520	Palsa	MAYEYPGAAGVLRLAKVRGRWLVHYMGRRAGGWASADVAAKSVAQHRSGLSEWDCRREPVPDDLLRWRPLGDSL
Ga0311372_122089351	3300030520	Palsa	MAYEYPSAAGVLRLMKVRGRWLMHFAGRQSGDWASPDAAAKAAAQHRSGLSEWDRRHEGAPEDLLDWRPLGDSL
Ga0170834_1053480482	3300031057	Forest Soil	GSRGAASGMAYEYPSAAGVLQIMQVHGRWLVRFAGRRSGGWPSPDQAAKAVARHQSGLAAWDRKRAEAPDDLLDWRPLGDSL
Ga0318538_107745761	3300031546	Soil	SRYRHHWLRRGHRGVAYEYPSTAGTVRLLQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRKQADAPEDLLDWRPLGDSL
Ga0318561_105864561	3300031679	Soil	CGFVGNIEAYGGVPMPYEYPAAAGLLRLSKQRGRWLLHFAGRQAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL
Ga0318565_104406371	3300031799	Soil	AYEYPSTAGAVRLVQVRGKWLLHFAGRRSGRWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGDSL
Ga0306925_111545181	3300031890	Soil	VRLLQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRKQADAPEDLLDWRPLGDSL
Ga0310912_109936952	3300031941	Soil	VAYEYPSTAGTVRLLQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRKQADAPEDLLDWRPLGDSL
Ga0310916_112417252	3300031942	Soil	SCGFVGNIEAYGGVPMPYEYPAAAGLLRLSKQRGRWLLHFAGREAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL
Ga0318562_106618382	3300032008	Soil	MPYEYPAAAGLLRLSKQRGRWLLHFAGREAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDL
Ga0318562_108780402	3300032008	Soil	MAYEYPSTAGTVRLIQINGRWLLHFGGRRSGRWPSPDEAARAVARHQSGLVAWDRRRIEAPEDLLDWRPLGDSL
Ga0318563_101236871	3300032009	Soil	SRYRHHWLRRGHRGVAYEYPSTAGTVRLLQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRQQADAPEDLLDWRPLGDSL
Ga0318563_103864931	3300032009	Soil	MAYEYPSTAGAVRLVQVRGKWLLHFAGRRSGRWPSPDAAARAVARHQSGLAAWDRQRLEAPEDLLDWRPLGDSL
Ga0318524_103300702	3300032067	Soil	VAYEYPSTAGTVRLLQAEGRWLLYFDGRRAGRWASPDTAAKAVARHQSGLAAWDRQQADAPEDLLDWRPLGDSL
Ga0311301_121124021	3300032160	Peatlands Soil	MAYEYPTTAGILRLIEVQGRWLLHFADRRSGRWPSPDMAAKAVARHQSGLTEWDRHWDEAPEDLVDWRPLGDSL
Ga0306920_1000870783	3300032261	Soil	MPYEYPAAAGLLRLSKQRGRWLLHFAGREAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL
Ga0335078_101850823	3300032805	Soil	MAYEYPSRVGTVRLIQAQGRWLLHFEGRAIGHWPSPDAAARAVASHRSGLPAWDRKHIEAPEDLLDWRPLGESL
Ga0335078_104983562	3300032805	Soil	MAYEYPSEAGTVHLVQIRGRWLLQFAGRRTGRWPSPDQAAKAAARHRSGLTDWDRQRIHVSEDLLDWRPIGDSL
Ga0335081_105178582	3300032892	Soil	MAYEYPSSAGTVRLIQDRGRWLLHFDGRAAGRWPSPDAAAKAAASHRSGLPAWDRRRVEAPEDLLDWRPLGESL
Ga0335069_114304462	3300032893	Soil	MPYEYPSAAGILRLTKERGRWLLHFAGSQAGGWRSAESAARAVARRQSGHPEWDRQGDWAPEDLLDWRPLGDSL
Ga0335074_102979991	3300032895	Soil	GTPMAYEYPSAAGVVQLVRSRGHWLLHFDGQRTGRWPSPDLAARAVSKHQSGLSAWDHRRLEAPEDLLDWRPLGDSL
Ga0335071_120846321	3300032897	Soil	EYPSIAGTVRLIQVGRRWRLHFDGRDAGDWPSADAAAQAVSRHRSGLRAWDRRRVEAPEDLLDWRPLGDSL
Ga0335072_107192852	3300032898	Soil	MPYEYPAAAGLLRLTKERGRWLLHFDGRQAGSWRSADSAAKAVARRKSGHPEWDRVGDWAPEDLLDWRPIGDSL
Ga0335072_113418271	3300032898	Soil	MAYEYPSAAGTVQLVRTRGRWLLHFDGQRTGQWPSPDQAAQAVARHQSGLSAWDHRKLDAPEDLLDWRPLGESL
Ga0335073_100477206	3300033134	Soil	MILLKWQIGAAGLIPAMAYEYPSTAGVVHLIRADGRWLLHFQGKRAGPWLSPDQAARAVARHRSGLSAWDRRRLEAPEDLLDWRPLGESL
Ga0335073_103434053	3300033134	Soil	MPYEYPAAAGLLRLTKERGRWLLHFDGRQVGSWRSADSAAKAVARRKSGHPEWDRVGDWAPEDLLDWRPIGDSL
Ga0335077_114934452	3300033158	Soil	MAYEYPSTAGTVQLVQFRGRWLLLFAGYRTGRWRSPDTAAKAVARHQSGLPAWDLRRVDAPEDLLDWRPLGDSL
Ga0335077_116029852	3300033158	Soil	MAYEFPSAAGTVRLVQVRGRWLLLFAGRRAGRWTSPDSAARAVARHQSGLQDWDRRMIEAPEDLLDWRPLGESL
Ga0310914_113436982	3300033289	Soil	YPAAAGLLRLSKQRGRWLLHFAGRQAGGWPSAETAAKAVARRQSGHPEWDRRGDWAPEDLLDWRPLGDSL
Ga0310811_100267137	3300033475	Soil	MIQLKGQIGAAGLISGMAYEYPSAAGVVHLIRADGRWLLYFQGKRAGHWLSPDLAARAVARHRSGLSAWDRRRIDAPEDLLDWRPLGESL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068020

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences