Metagenome / Metatranscriptome Family F067970

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067970
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	126 residues
Representative Sequence	VVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR
Number of Associated Samples	103
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	41.60 %
% of genes near scaffold ends (potentially truncated)	48.00 %
% of genes from short scaffolds (< 2000 bps)	85.60 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.400 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.800 % of family members)
Environment Ontology (ENVO)	Unclassified (23.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.00% β-sheet: 45.33% Coil/Unstructured: 52.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.121.6.1: Papovaviridae-like VP	d4u60a_	4u60	0.62474
b.121.5.0: automated matches	d7kp3a_	7kp3	0.61849
b.2.2.2: Cellulose-binding domain family III	d4b9fa_	4b9f	0.61168
b.121.6.0: automated matches	d4pcha_	4pch	0.60698
b.154.1.1: Agglutinin HPA-like	d2ccva1	2ccv	0.59829

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13360	PQQ_2	8.80
PF00005	ABC_tran	6.40
PF00196	GerE	4.80
PF00127	Copper-bind	4.80
PF00355	Rieske	4.00
PF00034	Cytochrom_C	3.20
PF01011	PQQ	2.40
PF08402	TOBE_2	1.60
PF13570	PQQ_3	0.80
PF07690	MFS_1	0.80
PF03544	TonB_C	0.80
PF13379	NMT1_2	0.80
PF07969	Amidohydro_3	0.80
PF02738	MoCoBD_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
All Organisms	root	All Organisms	41.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
cellular organisms	root	All Organisms → cellular organisms	41.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.20 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.20 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.20 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	3.20 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2.40 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.60 %
Amorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae	0.80 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
unclassified Oxalobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidicaldus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus	1.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.60 %
Alteromonas/Salinimonas group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group	0.80 %
Acuticoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus	0.80 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
unclassified Acidicaldus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus → unclassified Acidicaldus	1.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.60 %
Alteromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas	0.80 %
Acuticoccus yangtzensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus yangtzensis	0.80 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidicaldus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus → unclassified Acidicaldus → Acidicaldus sp.	1.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.60 %
unclassified Alteromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → unclassified Alteromonas	0.80 %
Acuticoccus yangtzensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus yangtzensis	0.80 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.40 %
Oxalobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	3.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidicaldus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus → unclassified Acidicaldus → Acidicaldus sp.	1.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.60 %
Alteromonas sp. LMIT007	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → unclassified Alteromonas → Alteromonas sp. LMIT007	0.80 %
Acuticoccus yangtzensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus yangtzensis	0.80 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100387288	Not Available	755	Open in IMG/M
3300000789\|JGI1027J11758_11952656	Not Available	608	Open in IMG/M
3300003219\|JGI26341J46601_10011760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2866	Open in IMG/M
3300004082\|Ga0062384_100643211	Not Available	723	Open in IMG/M
3300004092\|Ga0062389_100252168	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300004092\|Ga0062389_102105988	Not Available	739	Open in IMG/M
3300005329\|Ga0070683_102428287	Not Available	502	Open in IMG/M
3300005337\|Ga0070682_101361108	Not Available	605	Open in IMG/M
3300005435\|Ga0070714_100929202	Not Available	845	Open in IMG/M
3300005436\|Ga0070713_100184883	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300005436\|Ga0070713_100228986	Not Available	1689	Open in IMG/M
3300005436\|Ga0070713_101242829	Not Available	721	Open in IMG/M
3300005437\|Ga0070710_10134073	Not Available	1512	Open in IMG/M
3300005437\|Ga0070710_10867407	Not Available	649	Open in IMG/M
3300005548\|Ga0070665_100466240	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005563\|Ga0068855_101381958	Not Available	726	Open in IMG/M
3300005591\|Ga0070761_10076510	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300005718\|Ga0068866_11196749	Not Available	548	Open in IMG/M
3300005764\|Ga0066903_102762034	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300006028\|Ga0070717_10343314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1334	Open in IMG/M
3300006175\|Ga0070712_101243159	Not Available	648	Open in IMG/M
3300006755\|Ga0079222_11641591	Not Available	612	Open in IMG/M
3300006755\|Ga0079222_12164466	Not Available	552	Open in IMG/M
3300006804\|Ga0079221_10589430	Not Available	746	Open in IMG/M
3300006806\|Ga0079220_10452552	Not Available	859	Open in IMG/M
3300006881\|Ga0068865_101648536	Not Available	577	Open in IMG/M
3300006954\|Ga0079219_10263585	Not Available	1036	Open in IMG/M
3300009094\|Ga0111539_11415057	Not Available	807	Open in IMG/M
3300009101\|Ga0105247_10750683	Not Available	739	Open in IMG/M
3300009177\|Ga0105248_10089055	All Organisms → cellular organisms → Bacteria → Proteobacteria	3474	Open in IMG/M
3300009522\|Ga0116218_1134112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300010361\|Ga0126378_10708948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1118	Open in IMG/M
3300010376\|Ga0126381_100687690	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300010376\|Ga0126381_102507182	Not Available	739	Open in IMG/M
3300010379\|Ga0136449_100006716	All Organisms → cellular organisms → Bacteria → Proteobacteria	33215	Open in IMG/M
3300010379\|Ga0136449_103318106	Not Available	618	Open in IMG/M
3300010379\|Ga0136449_104057552	Not Available	546	Open in IMG/M
3300010379\|Ga0136449_104083296	Not Available	544	Open in IMG/M
3300010396\|Ga0134126_10537533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1343	Open in IMG/M
3300012212\|Ga0150985_108097129	Not Available	2881	Open in IMG/M
3300012212\|Ga0150985_110273320	Not Available	541	Open in IMG/M
3300012469\|Ga0150984_105257581	Not Available	743	Open in IMG/M
3300012469\|Ga0150984_109380590	Not Available	657	Open in IMG/M
3300012469\|Ga0150984_122402686	Not Available	511	Open in IMG/M
3300012988\|Ga0164306_10354402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1088	Open in IMG/M
3300013102\|Ga0157371_10719424	Not Available	748	Open in IMG/M
3300013105\|Ga0157369_10675645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300013296\|Ga0157374_10081083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3079	Open in IMG/M
3300014167\|Ga0181528_10123804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Amorphaceae → Acuticoccus → Acuticoccus yangtzensis	1402	Open in IMG/M
3300014168\|Ga0181534_10170621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1124	Open in IMG/M
3300014200\|Ga0181526_10067190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2283	Open in IMG/M
3300014497\|Ga0182008_10746889	Not Available	563	Open in IMG/M
3300014499\|Ga0182012_10067069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2808	Open in IMG/M
3300014968\|Ga0157379_11692249	Not Available	619	Open in IMG/M
3300015371\|Ga0132258_10754913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300015371\|Ga0132258_12583062	Not Available	1269	Open in IMG/M
3300015371\|Ga0132258_13712667	Not Available	1042	Open in IMG/M
3300015371\|Ga0132258_13924209	Not Available	1011	Open in IMG/M
3300015372\|Ga0132256_102472442	Not Available	621	Open in IMG/M
3300016357\|Ga0182032_11495802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300016371\|Ga0182034_11960696	Not Available	517	Open in IMG/M
3300016371\|Ga0182034_12023517	Not Available	509	Open in IMG/M
3300017948\|Ga0187847_10299557	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300018043\|Ga0187887_10536976	Not Available	690	Open in IMG/M
3300018047\|Ga0187859_10833774	Not Available	530	Open in IMG/M
3300018469\|Ga0190270_12332376	Not Available	596	Open in IMG/M
3300019256\|Ga0181508_1267813	Not Available	693	Open in IMG/M
3300020080\|Ga0206350_11288421	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300020579\|Ga0210407_10021622	All Organisms → cellular organisms → Bacteria → Proteobacteria	4774	Open in IMG/M
3300020582\|Ga0210395_10001442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18405	Open in IMG/M
3300020582\|Ga0210395_10339968	Not Available	1129	Open in IMG/M
3300021178\|Ga0210408_10956344	Not Available	665	Open in IMG/M
3300021374\|Ga0213881_10419334	Not Available	604	Open in IMG/M
3300021388\|Ga0213875_10104003	Not Available	1326	Open in IMG/M
3300021402\|Ga0210385_11167128	Not Available	591	Open in IMG/M
3300021403\|Ga0210397_10151288	Not Available	1622	Open in IMG/M
3300021475\|Ga0210392_10277720	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300021478\|Ga0210402_10954590	Not Available	784	Open in IMG/M
3300021479\|Ga0210410_10525519	Not Available	1055	Open in IMG/M
3300021560\|Ga0126371_10030592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5039	Open in IMG/M
3300021560\|Ga0126371_10443125	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300021560\|Ga0126371_10475950	Not Available	1396	Open in IMG/M
3300025915\|Ga0207693_10669490	Not Available	805	Open in IMG/M
3300025916\|Ga0207663_10887201	Not Available	713	Open in IMG/M
3300025916\|Ga0207663_11443746	Not Available	554	Open in IMG/M
3300025928\|Ga0207700_10028664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3919	Open in IMG/M
3300025929\|Ga0207664_11444630	Not Available	609	Open in IMG/M
3300025941\|Ga0207711_10230614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1696	Open in IMG/M
3300025944\|Ga0207661_11641267	Not Available	588	Open in IMG/M
3300027765\|Ga0209073_10331556	Not Available	610	Open in IMG/M
3300027783\|Ga0209448_10106121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus → unclassified Acidicaldus → Acidicaldus sp.	941	Open in IMG/M
3300027787\|Ga0209074_10299404	Not Available	642	Open in IMG/M
3300027824\|Ga0209040_10003154	All Organisms → cellular organisms → Bacteria → Proteobacteria	12702	Open in IMG/M
3300027905\|Ga0209415_10044087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5939	Open in IMG/M
3300027908\|Ga0209006_10017307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	6532	Open in IMG/M
3300028562\|Ga0302151_10011315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3409	Open in IMG/M
3300028765\|Ga0302198_10032229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3472	Open in IMG/M
3300028813\|Ga0302157_10274348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	932	Open in IMG/M
3300028867\|Ga0302146_10054644	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300029919\|Ga0302141_1228483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	506	Open in IMG/M
3300029987\|Ga0311334_10697843	Not Available	830	Open in IMG/M
3300030049\|Ga0302191_10202471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	746	Open in IMG/M
3300030529\|Ga0210284_1607028	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300030605\|Ga0210265_1015012	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300030624\|Ga0210251_10157054	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300030738\|Ga0265462_10217147	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300030741\|Ga0265459_10600455	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300030743\|Ga0265461_10002185	All Organisms → cellular organisms → Bacteria	2765	Open in IMG/M
3300031231\|Ga0170824_111287645	Not Available	513	Open in IMG/M
3300031261\|Ga0302140_10627621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → unclassified Oxalobacteraceae → Oxalobacteraceae bacterium	801	Open in IMG/M
3300031546\|Ga0318538_10438532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300031561\|Ga0318528_10598906	Not Available	591	Open in IMG/M
3300031564\|Ga0318573_10710262	Not Available	540	Open in IMG/M
3300031708\|Ga0310686_101739606	Not Available	664	Open in IMG/M
3300031768\|Ga0318509_10394757	Not Available	774	Open in IMG/M
3300031833\|Ga0310917_11067814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Alteromonas/Salinimonas group → Alteromonas → unclassified Alteromonas → Alteromonas sp. LMIT007	540	Open in IMG/M
3300031890\|Ga0306925_10664716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidicaldus → unclassified Acidicaldus → Acidicaldus sp.	1094	Open in IMG/M
3300031890\|Ga0306925_10666667	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300031910\|Ga0306923_12194555	Not Available	554	Open in IMG/M
3300031939\|Ga0308174_11894185	Not Available	513	Open in IMG/M
3300031954\|Ga0306926_12105414	Not Available	631	Open in IMG/M
3300032067\|Ga0318524_10541648	Not Available	612	Open in IMG/M
3300032160\|Ga0311301_11728852	Not Available	751	Open in IMG/M
3300032160\|Ga0311301_12705020	Not Available	546	Open in IMG/M
3300032261\|Ga0306920_102318462	Not Available	743	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.80%
Host-Associated	Host-Associated	19.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.40%
Plants	Host-Associated → Plants	19.20%
Aquatic	Environmental → Aquatic	10.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.20%
Freshwater	Environmental → Aquatic → Freshwater	10.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.20%
Peat	Environmental → Terrestrial → Peat	6.40%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.20%
Loam	Environmental → Terrestrial → Soil → Loam	15.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.60%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.80%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030529	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030605	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE042SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030624	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003872882	3300000364	Soil	AEERAVTNGLEVHETELIVRAEAPTHFLTKESCANAQVGWQIVPDSVKSEVVTARMMDPGGDPDWKVEKAEARTRVDSDKRRICLWGYCQGPLQFQCEIQVRASWKETR*
JGI1027J11758_119526561	3300000789	Soil	RAEERAVTNGLEVHETELIVRAEAPTHFLTKESCANAQVGWQIVPDSVKSEVVTARMMDPGGDPDWKVEKAEARTRVDSDKRRICLWGYCQGPLQFQCEIQVRASWKETR*
JGI26341J46601_100117602	3300003219	Bog Forest Soil	MIAAAETTAEGTKVCRTKFGSTLALVAVTTSAAVPLAAAETRAVSNGLEVHETALILHAEMPTHMLTNESCANAQTGWTIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRLDNGNTRICLWGYCQGPLQFQCEIQVRASWQERN*
Ga0062384_1006432111	3300004082	Bog Forest Soil	MRYQLLTCALAVVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR*
Ga0062389_1002521683	3300004092	Bog Forest Soil	MAEEGDHMRYQLLTCALAVVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR*
Ga0062389_1021059881	3300004092	Bog Forest Soil	VQDRRLGWILLWAAILPHSVLVRATAESRTVTNGLEVHETALILRAETPTNMLTNESCANAQAGWTIVPESVKTEVVTARMMDPDGDPDWKVEKAEGRTRTDHDNTRICLWGYCQGPLQFQCEIQVRASWQERN*
Ga0070683_1024282872	3300005329	Corn Rhizosphere	AVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0070682_1013611081	3300005337	Corn Rhizosphere	ETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0070714_1009292021	3300005435	Agricultural Soil	MTDESDNMRYRRLGWILPLVAGLTAVHVVLAHAETRTVTNGLEVHETALILRAETPTHLLTNESCANAQAGWKIVPASVKTEVVTARMMDPGGDPDWNVEKAEARTKLENDNSRICLQGYCQGPLQFQCEIQVRASWQETR*
Ga0070713_1001848832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VAHSRLGWTAAIIAVFTSVAVMHAAAETREVANGLQVHETALILQATPPTHMLTGESCTNAQSGWQIVPDSVKTEVPTARMMDPGGDPDWKVERAEARTRIERDNTRICLWGYCQGPLQFQCEIEVRASWQETR*
Ga0070713_1002289862	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTKRMKSIAVIAFCITAQAWAEERVVNNGLEAHETELIVHDAPPTQFLTKESCADAQVGWRIVPDSVKTEVVTARMMDPSGDPDWKVEKAEARTRLDNDNGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0070713_1012428291	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0070710_101340732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKGMKSTAAIVLCITAQAWAEEKTVNNGLEVHETELIVREAPPTHFLTKESCTDAQVGWKIVPDSIKTEVVTARMMDPSGDPDWKVEKAEARTRIDKDDGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0070710_108674071	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDESDNMRYRRLGWMLPLVAGLTVIRVVPVNAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQPGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTKLENDNARICLQGYCQGPLQFQCEIQVRASWQETR*
Ga0070665_1004662403	3300005548	Switchgrass Rhizosphere	MVLAASTPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0068855_1013819582	3300005563	Corn Rhizosphere	MGLIMVLAASTPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0070761_100765101	3300005591	Soil	VRQSRLGKSIALVAVIMTGTVAPGKAETRTFANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVDAARLMDPGGDPDCKVAKAAARTRIDNPNTRICLWGYCQGPMQFQCKIQVRASWQESR*
Ga0068866_111967491	3300005718	Miscanthus Rhizosphere	NGLQVHETALILQTTAPTHMLTGESCANAQSGWQIVPDSVKTEVTTARMMDPGGDPDWKVEKAEARTRIERDNTRICLWGYCQGPLQFQCEIEVRASWQEKR*
Ga0066903_1027620341	3300005764	Tropical Forest Soil	MEWQGESMRLRIVGTLAALTALFVHPAMAETRTIDNGLEVHETALILSTETPTHLLTNERCADAQAGWKIVPQSVKAEVVTARMMDPGGDPDWKVEKAEARARIVDDAARICLLGYCQGPLQFQCEIQVRASW
Ga0070717_103433142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTKGMKSTAAIVLCITAQAWAEEKTVNSGLEVHETELIVREAPPTHFLTKESCADAQAGWKIVPDSIKTEVVTARMMDPSGDPDWKVEKAEARTRIDKDDGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0070712_1012431591	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RLGWILPLVAGLTAVHVVLAHAETRTVTNGLEVHETALILRAETPTHLLTNESCANAQAGWKIVPASVKTEVVTARMMDPGGDPDWNVEKAEARTKLENDNSRICLQGYCQGPLQFQCEIQVRASWQETR*
Ga0079222_116415912	3300006755	Agricultural Soil	LIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0079222_121644662	3300006755	Agricultural Soil	MTKRMKSIAVIAFCITAQAWAEERVVNNGLEAHETELIVHEAPPTHFLTKESCIDAQAGWKIVPDSVKTEVVTARMMDPSGDPDWKVEKAEARTRIDNGNGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0079221_105894301	3300006804	Agricultural Soil	MTTKMKSIAIIALCTAAQAWADERAVNNGLEVHETELIVHEAPPTHFLTKESCTDAQAGWKIVPDSVKTEVVTARMMDPSGDPDWKVEKAEARTRIDNGNGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0079220_104525522	3300006806	Agricultural Soil	MTKREKLAAFIALSLAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0068865_1016485361	3300006881	Miscanthus Rhizosphere	MLVACIALSITAQAVAEERTVTGGLEVHETELIVHAETPTHFLTKESCTNAQAGWQIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARIRVDNDNQRICLWGYCQGPLQFQCELQVRASWKETR*
Ga0079219_102635852	3300006954	Agricultural Soil	MTKGMKSTAAIVLCITAQAWAEEKTVNNGLEVHETGLIVHEAPPTHFLTKESCADAQAGWKIVPDSIKTKVVTARMMDPSGDPDWKVEKAEARTRVDNENGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0111539_114150571	3300009094	Populus Rhizosphere	MTKRATLVAVILLSVAMRARAEERAVTNGLEVHETELIVRAEAPTHFLTKESCANAQVGWQIVPDSVKSEVVTARMMDPGGDPDWKVEKAEARTRVDSDKRRICLWGYCQGPLQFQCEIQVRASWKETR*
Ga0105247_107506831	3300009101	Switchgrass Rhizosphere	MTKREKLAAFIALSIAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVENAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0105248_100890553	3300009177	Switchgrass Rhizosphere	VQFRAIGLIMVLAASTPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0116218_11341121	3300009522	Peatlands Soil	VRQSQFGKSFALVAVITVGIVAPGEAETRTVANGLEVHETALILRAETPSHMLTNESCANAQTGWKIVLESVKTEVFTARMMDPGGDPDWKVEKAEARTRIDNGDARICLWGY
Ga0126378_107089481	3300010361	Tropical Forest Soil	VSCRLSGWILANLILCGTVECTAAETKTVTDGLEVHETELIVHAEAPTHMLTNESCANAQAGWKIVPESVKTQVITARMMDPGGDPDWKVEKAEGRTRLDNDNARICLWGYCQGPLQFQCEIQVRASWQESR*
Ga0126381_1006876901	3300010376	Tropical Forest Soil	SAILPATAETRAVTNGLEVHETALILDAEAPSHLLTNESCAEAQIGWKIVPESVKTEVITARMMDPGGDPDWKVEKAEARTRIDNDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0126381_1025071821	3300010376	Tropical Forest Soil	MNLRSFTTVLAVSEGDGRWQMTKGMKSIAAIVLCITAQAWAEDKTVNNGLEVHETELIVHEAPPTHFLTKESCTGVQAGWKIVPDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDNGRICLWGYCQGPLQFECEIQVRASWKETR*
Ga0136449_10000671611	3300010379	Peatlands Soil	VRQSQFGKSFALVAVITVGIVAPGEAETRTVANGLEVHETALILRAETPSHMLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNGDARICLWGYCQGPLQFQCEIQVRASWMESR*
Ga0136449_1033181061	3300010379	Peatlands Soil	VRTPHRERREKDNVRHSQLGKSVAVVAVVTIGSVAPGTAETRTVTNGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNANTRICLWGY
Ga0136449_1040575521	3300010379	Peatlands Soil	ALILRAEMPSHMLTNESCANAQTGWKIVPGSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNDETRICLWGYCQGPLQFQCEIQVRASWQESR*
Ga0136449_1040832961	3300010379	Peatlands Soil	RYHHQRLMWTLALVTDLINGGVVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQAGWKIVPDSVMTEVIIARMMDPGGDPDWKVEKAEARTRIDTDNTRICLQGYCQGPLQFQCEIQVRASWQERRAPP*
Ga0134126_105375332	3300010396	Terrestrial Soil	MTKQEKLAAFIALSLAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0150985_1080971291	3300012212	Avena Fatua Rhizosphere	VHKRHGGNDGRGDDVRYRCLRRILVLATILTHGVLTARAETRAVTNGLEVHETALILQPEAPSHLLTNASCTNAQPGWKIIPESVKAEVIAARMMDPGGDPDWKVEKAEARTSVENDNTRICLRGYCQGPLQFQCEIQVHASWQETR*
Ga0150985_1102733201	3300012212	Avena Fatua Rhizosphere	LLLIAVIAHGVLVQAAAETRTVADGLEVHETALILRAEMPSHMLTNESCANAAAGWKIMPDSVKAAVVTARMMDPGGDPDWKVEKAEARTRVDNDSTRICLWGYCQGPLQFQCEVQVRASWQEGR*
Ga0150984_1052575812	3300012469	Avena Fatua Rhizosphere	LFAFIAPGIATQARAEDRAVANGLEVHETELIVHAATPTHFLTKESCADSQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTRVDSDNRRICLWGYCQGPLQFQCEVQVRASWKEAR*
Ga0150984_1093805902	3300012469	Avena Fatua Rhizosphere	RNHVRHRCLGWNLVLVIILSRGVLTASAETRAVTDGLEVHETALILHPDVPTHLLTNESCANAQPGWKILPDSVKAEVIAARMMDPGGDPDWKVEKAEARTRVENDNTRICLRGYCQGPLQFQCEIQVHASWQETR*
Ga0150984_1224026862	3300012469	Avena Fatua Rhizosphere	LTGIIAVGAALQATAETRDVSNGLEVHETALIVRAEAPTHLLTNETCANAQAGWKIVPETVKTEVITARMMDPGGDPDWKVEKAEARTRLESGSNRICLWGYCQGPLQFQCEIQVRASWQEQR*
Ga0164306_103544021	3300012988	Soil	STPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0157371_107194242	3300013102	Corn Rhizosphere	MTKQEKLAAFIALSIAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0157369_106756451	3300013105	Corn Rhizosphere	MTKREKLAAFIALSIAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0157374_100810833	3300013296	Miscanthus Rhizosphere	MVLAASTPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVPARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0181528_101238041	3300014167	Bog	GPGLIGAGFPASARCRNFAWRTNQGRNDVRQVPTGLAIILACGLVTGPASAETRTVTNGLEVHETALIVNATPPTHMLSKESCTAAEAGWKIDPASVTTQVVTARMMDPSGDPDWKVEKAEGQTRIEADGTRICLAGYCQGPLQFQCEIQVRASWQETK*
Ga0181534_101706213	3300014168	Bog	MACALTLAGLDVVPRSVSAETRNVTDGLEVHETAPILRAEAPTYFITKESCASAEAGWKIDPGSVTTQIVTARMMDPSGDPDWKVEKAEARTRIADDDTKICLAGYCQGPFQFECEIVARASWRETR*
Ga0181526_100671901	3300014200	Bog	LGKSVALVAVITIGTVAPGEAETRTVANGLEVHETALILRAETPTHMLTNESCANAQPGWKIVPDSVTTEVVTARMMDPGGDPDWKVEKAEARTRIDNAATRICLWGYCQGPLQFECEIQVRASWQETR*
Ga0182008_107468891	3300014497	Rhizosphere	MTKREKLAAFIALSIAVQAHAEDRTVTDGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR*
Ga0182012_100670694	3300014499	Bog	MRQVPRELAVILTCAVGAGLSGAVRAEIRSVTNGLEVHETALIVNAEPPTHFISKESCATAEAGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEALTRLDADNTRICLAGYCQGPLQFQCEIQVRASWQETR*
Ga0157379_116922491	3300014968	Switchgrass Rhizosphere	LFAFIAPGIATQARAEDRAEANGLEVHETELIVHSATPTHFLTKESCADAQAGWKIVPESVKTEVMTARMMDPGGDPDWKVEKAEARTRVDSDNRRICLWGYCQGPLQFQCEVQVRASWKEAR*
Ga0132258_107549132	3300015371	Arabidopsis Rhizosphere	MATVVAVLVLMAVPSDAVETRTVVDGLEVHETVQILDPAEPTHIETHEACANARAGWRIVPDSVTAQVTTARMTDPGGDPDWKAEKAEARTRIEGDGTRICLWAYCQGPLQYQCEIQAKVSWRESN*
Ga0132258_125830621	3300015371	Arabidopsis Rhizosphere	MTDESDNMRYRRLGWILPLVAGLTAVHVVLAHAETRTVTNGLEVHETALILRAETPTHLLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTKLENDNARICLQGYCQGPLQFQCEIQVRASWQETR*
Ga0132258_137126671	3300015371	Arabidopsis Rhizosphere	MVLAASTPAAAETRQATNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR*
Ga0132258_139242091	3300015371	Arabidopsis Rhizosphere	MMLFAFIAPGIATQARAEDRAVANGLEVHETELIVHSATPTHFLTKESCADSQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTRVDSDNRRICLWGYCQGPLQFQCEVQVRASWKEAR*
Ga0132256_1024724421	3300015372	Arabidopsis Rhizosphere	ILRAETPSHLLTNESCANAQPGWKIVPESVKTEVVTARMMAPGGDPDWKVEKAEARTKLANDNSRICLQGYCQGPLQFQCEIQVRASWQETR*
Ga0182032_114958021	3300016357	Soil	TVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERN
Ga0182034_119606961	3300016371	Soil	NGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0182034_120235171	3300016371	Soil	PGFATRPYEIGSALNARIRMPYRKPRGGNVRYTQLRKVLGATAIFTAGTVAPGWTETRGVTDGLEVHETALILQAEMPTHLVTKESCATADTGWKIVPESAKADVVTARMMDPSGDPDWKVEKAEAQTRIDHDNTRICLWGYCQGPLQFECEIEVRASWQESR
Ga0187847_102995572	3300017948	Peatland	LEVHETALILRAETPSHMLTNESCANAQTGWKIVPDSVTTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0187887_105369762	3300018043	Peatland	VRWLRSAMACALALAAMECVTRPVSAETKTVTDGLEVHETAPILKADAPTYLLTKESCASAEAGWKIDPASVTTQIVTARMMDPSGDPDWKVEKAEARTRIAEDNTRICLAGYCQGPFQFQCEIQVRASWRETR
Ga0187859_108337741	3300018047	Peatland	VRHSQLGKSIALVAVVTIGTVAPGEAETRTVANGLEVHETALILRAETPSHMLTNESCANAQTGWKIVPDSVTTEVVTARMMDPGGDPDWKVEKAEARIRIDNDNTRICLRGYCQGPLQFQCEIQVRASWQESR
Ga0190270_123323762	3300018469	Soil	VSDGLEVHETALIVRAEAPSHMLTGESCANAQAGWKIMPASVQTEVVTARMMDPGGDPDRKVEKAEARARVDNDNAHICLWGYCQGPLQFQCEIQVRASWQESR
Ga0181508_12678131	3300019256	Peatland	VRQVPTGLAIILACGLVTGPASAETRTVTNGLEVHETALIVNATPPTHMLSKESCTAAEAGWKIDPASVTTQVVTARMMDPSGDPDWKVEKAEGQTRIEADGTRICLAGYCQGPLQFQCEIQVRASWQETK
Ga0206350_112884211	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	EKLAAFIALSIAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR
Ga0210407_100216221	3300020579	Soil	VRHSQFGSTLALAAVIAHGAVTHAAAETRTVANGLEVHETALILRAETPTHMLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNTRICLWGYCQGPLQFQCEIQVRASWQESH
Ga0210395_100014426	3300020582	Soil	MRYQLLTCALAVVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR
Ga0210395_103399683	3300020582	Soil	VRQSRLGKSIALVAVIMTGTVAPGKAETRTFANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVDAARLMDPGGDPDCKVAKAAARTRIDNPNTRICLWGYCQGPMQFQCKIQVRASWQESR
Ga0210408_109563441	3300021178	Soil	TRVVINGLEVHETALILHPEAPSHLLTNESCANAQPGWKIMPGSVKAEVIAARMMDPGGDPDWKVEKAEARTRVENDDTRICLQGYCQGPLQFQCEIQVRASWQETR
Ga0213881_104193341	3300021374	Exposed Rock	VRHRAWIPAFALLIGFALTSPLASAETKAITNGLEVHETALILRSEPPTYLETNQSCANADPGWKIVPGSVTTQVVTARMMDPSGDPDWKVEKAEARTKVDDDGKRICLWGYCQGPFQFRCEILVRASWQETR
Ga0213875_101040031	3300021388	Plant Roots	MKSSLFLVALVASGVAAQAEDRTVTNGLEVHETELIVQSQPPTHFQTKESCANAQAGWQIAPDSVKTEVVTARMMDPSGDPDWKVEKAEARTRVDNGNSRICLSGYCQGPLQFECEIQVRASWQETR
Ga0210385_111671281	3300021402	Soil	VVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLTNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR
Ga0210397_101512882	3300021403	Soil	VRHSQFGSTLALAALITHGAIGQVAAETRTVTNGLEVHETALILHEETPTHMLTNESCANAQSGWKIVPESVKTEVDTARMMDPGGDPDWKVEKAEGRTRVDNDNTRICLWGYCQGPLQFQCEIQVRASWQETR
Ga0210392_102777201	3300021475	Soil	TRTVANGLEAHETALILRAETPTHMLTNESCANAQTGWKIAPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRIDNDNTRICLRGYCQGPLQFQCEIQVRASWQETR
Ga0210402_109545901	3300021478	Soil	MLACKRRGRNDEEGNNVRHSQFGSTLALAVAIAHGAIAQAAAETRTVANGLEVHETALILRAEIPTHMLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNTRICLWGYCQGPLQFQ
Ga0210410_105255192	3300021479	Soil	MRYQLLTCALAVVALTSGGSVQANAETRTVTNGLEVHETALILRAETPSHLLSNESCANAQVGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRVDTDNTRICLQGYCQGPLQFQCEIQVRASWQESR
Ga0126371_100305926	3300021560	Tropical Forest Soil	VSCRLSGWILANLILCGTVECTAAETKTVTDGLEVHETELIVHAEAPTHMLTNESCANAQAGWKIVPESVKTQVITARMMDPGGDPDWKVEKAEGRTRLDNDNARICLWGYCQGPLQFQCEIQVRASWQESR
Ga0126371_104431253	3300021560	Tropical Forest Soil	VRTGWIVLLVAGAVPAIAETRAVTNGLEVHETALILDAQPPSHLLTNESCTEAQSGWKIVQDSVKTDVVTARMMDPGGDPDWKVEKAEARIRLDKDNTQICLRGYCQGPLQFQCEIQVRASWQETR
Ga0126371_104759501	3300021560	Tropical Forest Soil	VPRCLSGSILALAGFMTCGTVECAVAETRTVANGLEVHETELILHAEAPTHMLTNESCANAQAGWTIVPDSVKTQVVTARMMDPGGDPDWKVEKAEGRIRLDNDNTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0207693_106694901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VAHSRLGWTAAIIAVFTSVAVMHAAAETREVANGLQVHETALILQATPPTHMLTGESCTNAQSGWQIVPDSVKTEVPTARMMDPGGDPDWKVERAEARTRIERDNTRICLWGYCQGPLQFQCEIEVRASWQETR
Ga0207663_108872011	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAHSRLGWTAAIIAVFTSVAVMHAAAETREVANGLQVHETALILQATPPTHMLTGESCTNAQSGWQIVPDSVKTEVPTARMMDPGGDPDWKVERAEARTRIERDNTRICLWGYCQGPLQFQCEIEVR
Ga0207663_114437462	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ITAQAWAEEKTVNNGLEVHETELIVREAPPTHFLTKESCTDVQVGWKIVPDSIKTEVVTARMMDPSGDPDWKVEKAEARTRIDKDDGRICLWGYCQGPLQFECEIQVRASWKETR
Ga0207700_100286642	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTDESDNMRYRRLGWILPLVAGLTAVHVVLAHAETRTVTNGLEVHETALILRAETPTHLLTNESCANAQAGWKIVPASVKTEVVTARMMDPGGDPDWNVEKAEARTKLENDNSRICLQGYCQGPLQFQCEIQVRASWQETR
Ga0207664_114446301	3300025929	Agricultural Soil	FTTSSERERRRWQMTKGMKSTAAIVLCITAQAWAEEKTVNSGLEVHETELIVREAPPTHFLTKESCTDAQVGWKIVPDSIKTEVVTARMMDPSGDPDWKVEKAEARTRIDKDDGRICLWGYCQGPLQFECEIQVRASWKETR
Ga0207711_102306143	3300025941	Switchgrass Rhizosphere	VQFRAIGLIMVLAASTPAAAETRQVTNGVEVHETALILDAAAPSHLLTNESCADATAGWKIVPDTVKAEVVTARMMDPGGDPDWKVEKAEARTRIDSDNTRICLRGYCQGPLQFQCEIQVRASWQETR
Ga0207661_116412672	3300025944	Corn Rhizosphere	AAFIALSLAVQAHAEDRTVTNGLEVHETELIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR
Ga0209073_103315562	3300027765	Agricultural Soil	AETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR
Ga0209448_101061211	3300027783	Bog Forest Soil	VLATSNLFRLVYAASSTAIPLAAPETRTVSNGLEVHETALILHAEMPTHMLTSESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRLDNGNTRICLWGYCQGPLQFQCEIQVRASWKERD
Ga0209074_102994041	3300027787	Agricultural Soil	LIVRAETPTHFLTKESCANAQSGWHIVLDSIKTEVVTARMMDPSGDPDWKVEKAEARTRVDNDDRRICLWGYCQGPLQFECELQVRASWKETR
Ga0209040_100031545	3300027824	Bog Forest Soil	MIAAAETTAEGTKVCRTKFGSTLALVAVTTSAAVPLAAAETRAVSNGLEVHETALILHAEMPTHMLTNESCANAQTGWTIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRLDNGNTRICLWGYCQGPLQFQCEIQVRASWQERN
Ga0209415_100440873	3300027905	Peatlands Soil	MNGCEPRIRNNGRGDNVRQSQFGKSFALVAVITVGIVAPGEAETRTVANGLEVHETALILRAETPSHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNGDARICLWGYCQGPLQFQCEIQVRASWMESR
Ga0209006_100173075	3300027908	Forest Soil	GQVAAETRTVTNGLEVHETALILHEETPTHMLTNESCANAQSGWKIVPESVKTEVDTARMMDPGGDPDWKVEKAEGRTRVDNDNTRICLWGYCQGPLQFQCEIQVRASWQETR
Ga0302151_100113153	3300028562	Bog	MRRVPTGLAVILTCAVGAALSGATRAETRTVTNGLEVHETALIVNAEPPTHFISKESCAAAETGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0302198_100322293	3300028765	Bog	MRQVPRELAVILTCAVGAALSGATRAETRTVTNGLEVHETALIVNAEPPTHFISKESCAAAETGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0302157_102743481	3300028813	Bog	MRQVPRELAVILTCAVGAGLSGAVRAEIRSVTNGLEVHETALIVNAEPPTHFISKESCATAEAGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEALTRLDADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0302146_100546441	3300028867	Bog	LSGAVRAEIRSVTNGLEVHETALIVNAEPPTHFISKESCATAEAGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0302141_12284832	3300029919	Bog	NGLEVHETALIVNAEPPTHFISKESCATAEAGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0311334_106978432	3300029987	Fen	MGRIAAGFVFISLLAAVSGLPTRAAAETRTVTDGVEVHESAPILRAEPPTHFVTKETCAAAQPGWTIDPASVTTHVVTARMMDPSGDPDWKVEKAEGRTRLDNGNSRICLAAYCEGPFQFQCEILVRASWRETK
Ga0302191_102024711	3300030049	Bog	TVTNGLEVHETALIVNAEPPTHFISKESCAAAETGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRSSWQETR
Ga0210284_16070282	3300030529	Soil	LVTVVTIAGVAPGKAETRTVANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0210265_10150121	3300030605	Soil	VRTPHRERWEKDNVWHSQLAKRIALVTVATIAGVAPGKAETRTVANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0210251_101570542	3300030624	Soil	FLLLFCIIALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0265462_102171471	3300030738	Soil	VWHSQLAKRIALVTVATIAGVAPGKAETRTVANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0265459_106004551	3300030741	Soil	SQLGKSIALVAVITIGTVAPGEAETRTVANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0265461_100021852	3300030743	Soil	VWHSQLAKCIALVTVVTIAGVAPGKAETRTVANGLEVHETALILRAETPTHMLTNESCANAQTGWKIVPDSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNADTRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0170824_1112876451	3300031231	Forest Soil	RSYFGTRRDTLASPVQCEEDNVRRSQIEWTLGLAAVIAHGAFAQASAETRTVANGLEVHETALILRAEAPTHMLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNSRICLWGYCQGPLQSQCEIQVRASWQESH
Ga0302140_106276211	3300031261	Bog	MRRVPTGLAVILTCAVGAALSGAPRAETRTVTNGLEVHETALIVNAEPPTHFISKESCAAAETGWKIDPASVKTAVVTARMMDPSGDPDWKVEKAEARTRLEADNTRICLAGYCQGPLQFQCEIQVRASWQETR
Ga0318538_104385321	3300031546	Soil	GGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0318528_105989061	3300031561	Soil	VRYRFLGWIVTLATGLTSGGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0318573_107102622	3300031564	Soil	TGLTSGGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQER
Ga0310686_1017396061	3300031708	Soil	VRHNQSGKSFALVAAITIGVVAPGAAETRSVANGLEVHETALILRAETPTHMLTNESCANAQAGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEARTRIDSDNARICLWGYCQGPLQFQCEIQVRASWQESR
Ga0318509_103947571	3300031768	Soil	VRYRFLGWIVTLATGLTSGGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQV
Ga0310917_110678141	3300031833	Soil	DSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0306925_106647162	3300031890	Soil	VRYRFLGWIVTLATGLTSGGAVPAEAESRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0306925_106666672	3300031890	Soil	MPYRKPRGGNVRYTQLRKVLGATAIFTAGTVAPGWTETRGVTNGLEVHETALILQAEMPTHLVTKESCATAETGWKIVPESAKADVVTARMMDPSGDPDWKVEKAEARTRIDRDNTRICLWGYCQGPLQFECEIEVRASWQESR
Ga0306923_121945551	3300031910	Soil	CATADDESQGNVRYRFLGWIVTLATGLTSGGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERD
Ga0308174_118941852	3300031939	Soil	EERAVNNGLEVHETELIVREAPPTHFLTKESCADAQPGWKIIADAVKTEVVTARMMDPSGDPDWKVEKAEAHTRIDNDNGRICLWGYCQGPLQFECEIQVRASWKEAR
Ga0306926_121054141	3300031954	Soil	ATAIFTAGTVAPGWTETRGVTNGLEVHETALILQAEMPTHLVTKESCATAETGWKIVPESAKADVVTARMMDPSGDPDWKVEKAEARTRIDRDNTRICLWGYCQGPLQFECEIEVRASWQESR
Ga0318524_105416481	3300032067	Soil	VRYRFLGWIVTLATGLTSGGAVPAEADSRTVSNGLEVHETALILHAETPTHMLTNESCANAQTGWKIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDNDNARICLWGYCQGPLQFQCEIQVRASWQERR
Ga0311301_117288521	3300032160	Peatlands Soil	MARTAEEWDNVQYRRLGWILLLAAILPHGVLVRATAETGTFTNGLEVHETALILRAETPAHMLTNESCANAQAGWTIVPESVKTEVVTARMMDPGGDPDWKVEKAEGRTRVDHDNTRICLWGYCQG
Ga0311301_127050201	3300032160	Peatlands Soil	ALILRAEMPSHMLTNESCANAQTGWKIVPGSVKTEVVTARMMDPGGDPDWKVEKAEARTRIDNDETRICLWGYCQGPLQFQCEIQVRASWQESR
Ga0306920_1023184621	3300032261	Soil	NGLEVHETALILHADTPTHMLTNESCANTQPGWTIVPESVKTEVVTARMMDPGGDPDWKVEKAEGHTRLDHDNKRICLWGYCQGPLQFQCEIQVRASWQERH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067970

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences