Metagenome / Metatranscriptome Family F067939

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	60 residues
Representative Sequence	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQPGDST
Number of Associated Samples	90
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.40 %
% of genes near scaffold ends (potentially truncated)	27.20 %
% of genes from short scaffolds (< 2000 bps)	93.60 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.800 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.200 % of family members)
Environment Ontology (ENVO)	Unclassified (26.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.48% β-sheet: 9.20% Coil/Unstructured: 56.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF09538	FYDLN_acid	1.60
PF01656	CbiA	1.60
PF13495	Phage_int_SAM_4	0.80
PF00126	HTH_1	0.80
PF08447	PAS_3	0.80
PF00884	Sulfatase	0.80
PF13676	TIR_2	0.80
PF07883	Cupin_2	0.80
PF01548	DEDD_Tnp_IS110	0.80
PF00069	Pkinase	0.80
PF00166	Cpn10	0.80
PF01381	HTH_3	0.80
PF00239	Resolvase	0.80
PF00313	CSD	0.80
PF00589	Phage_integrase	0.80
PF01609	DDE_Tnp_1	0.80
PF02621	VitK2_biosynth	0.80
PF07859	Abhydrolase_3	0.80
PF06934	CTI	0.80
PF10276	zf-CHCC	0.80
PF04993	TfoX_N	0.80
PF06210	DUF1003	0.80
PF00294	PfkB	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.20
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.80
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.80
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.80
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.80
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.80
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.80
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.80
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.80
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.80
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.80
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.80
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
All Organisms	root	All Organisms	35.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
cellular organisms	root	All Organisms → cellular organisms	35.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.60 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.00 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.80 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.80 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.00 %
Candidatus Zambryskibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Zambryskibacteria	0.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.80 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.00 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.60 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.80 %
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Zambryskibacteria → Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	0.80 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	0.80 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.00 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.80 %
Bradyrhizobium sp. ORS 375	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	0.80 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.80 %
Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Zambryskibacteria → Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	0.80 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	0.80 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10089288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Zambryskibacteria → Candidatus Zambryskibacteria bacterium RIFCSPLOWO2_01_FULL_47_14	1461	Open in IMG/M
3300004080\|Ga0062385_10261317	Not Available	971	Open in IMG/M
3300004080\|Ga0062385_10849553	Not Available	602	Open in IMG/M
3300004080\|Ga0062385_10875928	Not Available	594	Open in IMG/M
3300004082\|Ga0062384_101214112	Not Available	549	Open in IMG/M
3300004082\|Ga0062384_101401069	Not Available	515	Open in IMG/M
3300004091\|Ga0062387_101271859	Not Available	580	Open in IMG/M
3300004092\|Ga0062389_103802505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ORS 375	567	Open in IMG/M
3300004635\|Ga0062388_100704665	Not Available	943	Open in IMG/M
3300004635\|Ga0062388_101589337	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005332\|Ga0066388_104424268	Not Available	716	Open in IMG/M
3300005591\|Ga0070761_10688193	Not Available	640	Open in IMG/M
3300005610\|Ga0070763_10875608	Not Available	533	Open in IMG/M
3300005764\|Ga0066903_100716889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1768	Open in IMG/M
3300005994\|Ga0066789_10228585	Not Available	782	Open in IMG/M
3300005995\|Ga0066790_10410642	Not Available	579	Open in IMG/M
3300005995\|Ga0066790_10518071	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300006028\|Ga0070717_11230893	Not Available	681	Open in IMG/M
3300006047\|Ga0075024_100427220	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300006047\|Ga0075024_100566784	Not Available	606	Open in IMG/M
3300006050\|Ga0075028_100434121	Not Available	757	Open in IMG/M
3300006086\|Ga0075019_10660300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300006176\|Ga0070765_100821062	Not Available	879	Open in IMG/M
3300006176\|Ga0070765_101140321	Not Available	736	Open in IMG/M
3300006354\|Ga0075021_10524501	Not Available	752	Open in IMG/M
3300009525\|Ga0116220_10073236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1438	Open in IMG/M
3300009700\|Ga0116217_10281760	Not Available	1072	Open in IMG/M
3300010154\|Ga0127503_10797152	Not Available	1058	Open in IMG/M
3300010159\|Ga0099796_10233187	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010341\|Ga0074045_10444507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300010343\|Ga0074044_10881802	Not Available	585	Open in IMG/M
3300010376\|Ga0126381_102434587	Not Available	751	Open in IMG/M
3300010379\|Ga0136449_100373641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	2546	Open in IMG/M
3300010379\|Ga0136449_101324604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1120	Open in IMG/M
3300010379\|Ga0136449_101891228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300010379\|Ga0136449_102134196	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300010379\|Ga0136449_104110870	Not Available	541	Open in IMG/M
3300010862\|Ga0126348_1331060	Not Available	796	Open in IMG/M
3300011120\|Ga0150983_10297378	Not Available	506	Open in IMG/M
3300012200\|Ga0137382_11183911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300012205\|Ga0137362_11609151	Not Available	536	Open in IMG/M
3300012984\|Ga0164309_11689262	Not Available	543	Open in IMG/M
3300014168\|Ga0181534_10881872	Not Available	534	Open in IMG/M
3300014199\|Ga0181535_10623974	Not Available	617	Open in IMG/M
3300014199\|Ga0181535_10635903	Not Available	610	Open in IMG/M
3300014489\|Ga0182018_10275534	Not Available	920	Open in IMG/M
3300014489\|Ga0182018_10455595	Not Available	680	Open in IMG/M
3300014489\|Ga0182018_10696738	Not Available	529	Open in IMG/M
3300014495\|Ga0182015_10641113	Not Available	672	Open in IMG/M
3300014501\|Ga0182024_10396777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1786	Open in IMG/M
3300014501\|Ga0182024_10459632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1630	Open in IMG/M
3300014658\|Ga0181519_10432765	Not Available	811	Open in IMG/M
3300014838\|Ga0182030_11587127	Not Available	536	Open in IMG/M
3300015051\|Ga0137414_1176811	Not Available	6332	Open in IMG/M
3300016270\|Ga0182036_10487117	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300016294\|Ga0182041_11757508	Not Available	574	Open in IMG/M
3300016319\|Ga0182033_10604825	Not Available	953	Open in IMG/M
3300016341\|Ga0182035_11008971	Not Available	738	Open in IMG/M
3300016357\|Ga0182032_10398112	Not Available	1113	Open in IMG/M
3300016404\|Ga0182037_11647070	Not Available	571	Open in IMG/M
3300016445\|Ga0182038_10742964	Not Available	857	Open in IMG/M
3300017946\|Ga0187879_10815913	Not Available	521	Open in IMG/M
3300018034\|Ga0187863_10429356	Not Available	737	Open in IMG/M
3300018042\|Ga0187871_10282978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300018042\|Ga0187871_10458793	Not Available	704	Open in IMG/M
3300020579\|Ga0210407_11482384	Not Available	501	Open in IMG/M
3300020582\|Ga0210395_10369653	Not Available	1079	Open in IMG/M
3300021086\|Ga0179596_10679007	Not Available	522	Open in IMG/M
3300021088\|Ga0210404_10547685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300021178\|Ga0210408_10922458	Not Available	679	Open in IMG/M
3300021388\|Ga0213875_10634992	Not Available	517	Open in IMG/M
3300021401\|Ga0210393_10526013	Not Available	966	Open in IMG/M
3300021405\|Ga0210387_10071548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2838	Open in IMG/M
3300021405\|Ga0210387_10198226	Not Available	1741	Open in IMG/M
3300021405\|Ga0210387_10269062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300021420\|Ga0210394_11053183	Not Available	703	Open in IMG/M
3300021478\|Ga0210402_10151257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2114	Open in IMG/M
3300021478\|Ga0210402_10328079	Not Available	1418	Open in IMG/M
3300021478\|Ga0210402_10712440	Not Available	927	Open in IMG/M
3300021478\|Ga0210402_10729768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	914	Open in IMG/M
3300021478\|Ga0210402_11037059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300021478\|Ga0210402_11084883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	728	Open in IMG/M
3300021478\|Ga0210402_11988691	Not Available	507	Open in IMG/M
3300022533\|Ga0242662_10281800	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300025915\|Ga0207693_10805546	Not Available	724	Open in IMG/M
3300026217\|Ga0209871_1113227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300026291\|Ga0209890_10089594	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300026294\|Ga0209839_10121018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300027535\|Ga0209734_1058353	Not Available	731	Open in IMG/M
3300027568\|Ga0208042_1136074	Not Available	618	Open in IMG/M
3300027698\|Ga0209446_1083939	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300027903\|Ga0209488_10474678	Not Available	919	Open in IMG/M
3300027908\|Ga0209006_10022754	Not Available	5679	Open in IMG/M
3300027908\|Ga0209006_10061529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3356	Open in IMG/M
3300027910\|Ga0209583_10061701	Not Available	1351	Open in IMG/M
3300028780\|Ga0302225_10495524	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300028789\|Ga0302232_10460813	Not Available	625	Open in IMG/M
3300029910\|Ga0311369_10303836	Not Available	1423	Open in IMG/M
3300029944\|Ga0311352_10555101	Not Available	922	Open in IMG/M
3300029999\|Ga0311339_10151363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2724	Open in IMG/M
3300030007\|Ga0311338_12065413	Not Available	504	Open in IMG/M
3300030058\|Ga0302179_10038399	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300030399\|Ga0311353_11624107	Not Available	521	Open in IMG/M
3300030503\|Ga0311370_10402636	Not Available	1719	Open in IMG/M
3300031231\|Ga0170824_101855601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300031233\|Ga0302307_10497997	Not Available	617	Open in IMG/M
3300031708\|Ga0310686_100827051	Not Available	740	Open in IMG/M
3300031708\|Ga0310686_115012516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	1113	Open in IMG/M
3300031770\|Ga0318521_10757876	Not Available	591	Open in IMG/M
3300031890\|Ga0306925_10536695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1242	Open in IMG/M
3300031902\|Ga0302322_100733580	Not Available	1174	Open in IMG/M
3300031902\|Ga0302322_102075265	Not Available	699	Open in IMG/M
3300031912\|Ga0306921_12508374	Not Available	535	Open in IMG/M
3300031941\|Ga0310912_11483996	Not Available	511	Open in IMG/M
3300032001\|Ga0306922_10948418	Not Available	891	Open in IMG/M
3300032001\|Ga0306922_11713619	Not Available	622	Open in IMG/M
3300032160\|Ga0311301_10507798	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300032160\|Ga0311301_10550043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1688	Open in IMG/M
3300032160\|Ga0311301_10953496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300032160\|Ga0311301_11001700	Not Available	1105	Open in IMG/M
3300032160\|Ga0311301_11081098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300032160\|Ga0311301_12716208	Not Available	544	Open in IMG/M
3300032180\|Ga0307471_102620542	Not Available	639	Open in IMG/M
3300032892\|Ga0335081_10916746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	1031	Open in IMG/M
3300032892\|Ga0335081_12441004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.20%
Host-Associated	Host-Associated	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.40%
Aquatic	Environmental → Aquatic	20.80%
Plants	Host-Associated → Plants	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.80%
Freshwater	Environmental → Aquatic → Freshwater	16.00%
Peat	Environmental → Terrestrial → Peat	9.60%
Sediment	Environmental → Aquatic → Sediment	4.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.60%
Loam	Environmental → Terrestrial → Soil → Loam	9.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.20%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.20%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.80%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_100892882	3300004080	Bog Forest Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRGGYVYRNGDEHLLAERGHDALAQPSVYPGMVHEPSDVKN
Ga0062385_102613172	3300004080	Bog Forest Soil	MNQVIRELKRHFGGETLTPEQLNGLIRAGYVYRNGDEHGLTDQGRDALARSVTAEQSGGQD*
Ga0062385_108495532	3300004080	Bog Forest Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYIYRNGDEHLLTDMGRDALAQPGVYPSGEPPGIEIV
Ga0062385_108759282	3300004080	Bog Forest Soil	MNQVIRELKRQFAGETLAPEQLKGLIRAGYVYRNGNEHVITDKGRDALAQPGVY
Ga0062384_1012141121	3300004082	Bog Forest Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRGGYVYRNGDEHLLTDMGREALAQPGVYPRVEH*
Ga0062384_1014010691	3300004082	Bog Forest Soil	LKRQVAGEKLEPEQLKGLIRGGYVYRNGDEHLLTDLGREALAQPGVYPGVAH*
Ga0062387_1012718591	3300004091	Bog Forest Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYIYRNGDEHLLTDMGRDALAQPGVYPSGEPPGIEIVGALGHPGE*
Ga0062389_1038025051	3300004092	Bog Forest Soil	MSELKRQFAGETLAPEQLKGLIRAGYVYRNGDEYLLTDKGRDALAQPGVHPQEADQRSDHTS*
Ga0062388_1007046651	3300004635	Bog Forest Soil	MDQIIRELKRQVAGEKLEPEQLKGLIRGGYVYRNGDEHLLTNLGREALARLGVYPGVEH*
Ga0062388_1015893372	3300004635	Bog Forest Soil	MHQIIRELKRQFAGEKLEPEKLEGLIRAGYVYRNGDEYPLTEMGRDALSKTGGEPRV*
Ga0066388_1044242682	3300005332	Tropical Forest Soil	MNQIIRELKRQSIGEKLRQNLKALIVTDKGRDALAQLRVQPSESGFC*
Ga0070761_106881932	3300005591	Soil	QIMRELVRHVTGGALAPVQLRGLVRAGYVYRNDDDHILTDKGRDALTRSGVTPPAANSQ*
Ga0070763_108756082	3300005610	Soil	MDQIMRELVRHVAGGALAPVQLQGLVRAGYVYRNDDDHILTDKGRDALTRSGVTPPAANSQ*
Ga0066903_1007168891	3300005764	Tropical Forest Soil	MKQMIRELERQAAGEKLEPEQLKGLIRTGYVYRIGDEHHLTDMGRHALVQPGASPEVAQ*
Ga0066789_102285852	3300005994	Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYVYRNDLLTDQGRQALAQPGVYPGAAH*
Ga0066790_104106422	3300005995	Soil	MNQIIRELKRLFAGEELEPEQLRGLIRAGYVYRNGDEHLLTDKGRDTLAQPGVQPGMAH*
Ga0066790_105180712	3300005995	Soil	MKQIIRELKRQVAGEKLEPEQLKGLTRAGYVYRNDDEHLLTDQGRQALAQPGVYPRGAH*
Ga0070717_112308932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNQIIRELKRQAAGEKVAPEQLKALIRAGYLYRNGDEHFLTDKGRDALAQLGVQPGG*
Ga0075024_1004272201	3300006047	Watersheds	QMIRELKRQVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGHVALAQPGVYPRGEPVPEAAKRAP*
Ga0075024_1005667841	3300006047	Watersheds	MKQMIRELKRQVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGRDALAQPGVYPGGECSEPT*
Ga0075028_1004341212	3300006050	Watersheds	MNQIIRELKRQSAGEKLVPEQLEALIRAGYVHRNGDEHFLTDKSRDALAQLRVQPGESGF
Ga0075019_106603002	3300006086	Watersheds	MNQIIRELKRQAAGEKLAPEQLKALIRAGYVYRNGDEHFLTDKGRDALAQLGVQPGDGTLTGGIEIVRASRSRWSHRS*
Ga0070765_1008210621	3300006176	Soil	MKQMIRELKRQVAGETLAPEQLKGLIRAGYVYRNGEEHLLTDMGREALAQPGVYPMVELPAPL*
Ga0070765_1011403212	3300006176	Soil	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGDGLAEIR*
Ga0075021_105245012	3300006354	Watersheds	MKQMIRELKRQVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGHVALAQPGVYPRGEPVPEAAKRAP*
Ga0116220_100732363	3300009525	Peatlands Soil	MNQVIRELKRHAAGEKLAPEQLEGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQLLPQWRCEPRD*
Ga0116217_102817602	3300009700	Peatlands Soil	MNQVIRELKRQAAGEKLAPEQLEGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQLLPQWRCEPRD*
Ga0127503_107971522	3300010154	Soil	VNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHLLTDLGRDALAQPGVYPGGQSSEDCMSFP*
Ga0099796_102331872	3300010159	Vadose Zone Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGRDALAQPGVYPGGQTKQVSVD*
Ga0074045_104445071	3300010341	Bog Forest Soil	MNQIIRELKRQAAGEKLAPEQLKALIRAGYVYRNGDEHFLTDRGRDALAELRAPPGDYSRRTPSCIVRP*
Ga0074044_108818021	3300010343	Bog Forest Soil	MKQIIRELKRLVAGEKLEPEQLKGLIRAGYVYRNGDEHILTDQGRDALAQPGVYPRVEH*
Ga0126381_1024345872	3300010376	Tropical Forest Soil	MNQITRELNQRSDGEKLAPEQLNGLIRAGHVYSNGYEPFLTDKGRDALAQLGVQPGESGF
Ga0136449_1003736413	3300010379	Peatlands Soil	MKQIIRELKRQVAGEKLEPEQLRALVRAGYVYRNGDEHLLTDMGREALAQPGVYPRVEQ*
Ga0136449_1013246041	3300010379	Peatlands Soil	RVHSGGRMNQIIRELKRQAAGDKLAPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGMAH*
Ga0136449_1018912281	3300010379	Peatlands Soil	MNQIIRELRRQAAGEKLAPEQLRALIHAGYVYRNGDEHFLTDKGRDALAQLGVQPGD
Ga0136449_1021341963	3300010379	Peatlands Soil	MKQIVRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDKGREALAQPGVYPRVEH*
Ga0136449_1041108701	3300010379	Peatlands Soil	MNPIIRELKRQAAGEKLAPEQLKGLIRAGYVYWNGDEHFLTDKGRDALAQLRVQPGDGTLTEGASKSFGPP
Ga0126348_13310602	3300010862	Boreal Forest Soil	VGRVNQIIRELKRLFAGENLEPEQLRGLIRTGYVYRNGDEHLLTDKGRDALAQSGVEPGVAQ*
Ga0150983_102973781	3300011120	Forest Soil	MKQMIRELKRQVAGETLAPEPLKGLIRAGYVYRNGEEHLLTDMGREALAQPGVYPRVEH*
Ga0137382_111839112	3300012200	Vadose Zone Soil	VNQIIRELKRLFAGEKLEPEQLRGLIRADYVYRNGDEHLLTDKGRDALAHTPREQEN*
Ga0137362_116091511	3300012205	Vadose Zone Soil	VGRVNQIIRELKRLFAGENLEPEQLRGLIRAGYVYRNGDEHLLTDKGRDALAQSGVEPGVAQ*
Ga0164309_116892621	3300012984	Soil	MNQIIRELKRQAAGKKLAPEQLKALIRAGYVYRNGDEHFLTDKGRDALARRPAGG*
Ga0181534_108818721	3300014168	Bog	MNQVIRELQRHSAGKSLAPEQLNGLIRAGYVYRNGDEHSLTDKGRDALARSVAAEHRDGQG*
Ga0181535_106239741	3300014199	Bog	QMIRELKRQVAGETLAPEQLKGLIRAGYVYRNGEEHLLTDMGREALAQPGVYPMAELPAPL*
Ga0181535_106359031	3300014199	Bog	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLRVQSGDGTLTEGAS
Ga0182018_102755341	3300014489	Palsa	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGREALAQPGVYPRVEH*
Ga0182018_104555951	3300014489	Palsa	MNQIIRELKRQAAGDKLAPEQLKGLIYRNGDEHFLTDKGRDALAQRAIKVTGL*
Ga0182018_106967382	3300014489	Palsa	MKKIIRKLKRRIAGEKLEPEQLKGLIRGGHVYRNGDEHLLTDMGREALAQPGVYPGLGH*
Ga0182015_106411132	3300014495	Palsa	MKQIIRELKRQAAGEKLELEQLKGLIRAGYVYRNGDEHLLTDMGRNALSQPGVYPE
Ga0182024_103967771	3300014501	Permafrost	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGNEHLLTDMGREALAQPGVYPRVEH*
Ga0182024_104596323	3300014501	Permafrost	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGREALAQPGVTSMAHEPSDVKN*
Ga0181519_104327652	3300014658	Bog	MNQVIRELQRHSAGKSLAPEQLNGLIRAGYVYRNGDEHSLTDKGRDALA
Ga0182030_115871271	3300014838	Bog	VAGEKLDPEQLKGLIRAGYVYRNEDEHRLTDQGRQALARPGVYPGVTH*
Ga0137414_11768113	3300015051	Vadose Zone Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGHDALAQPGVYPGGQSSEAT*
Ga0182036_104871172	3300016270	Soil	MNQIIRELKRQSAGEKLAPEQLKALILTDKGRDALAQLRVQPSESGF
Ga0182041_117575081	3300016294	Soil	MNQITRELNQRSDGEKLAPEQLNGRIRAGYVYWNGYEPFLTDKGRDALAQLGVQPGESGI
Ga0182033_106048252	3300016319	Soil	MNQIIRELKRQSAGEKLAPEQLKALILTDKGRDALAQLRVQPSESGFC
Ga0182035_110089712	3300016341	Soil	MNQIIRELKRQSAGDKLAPEQLKALILTDKGRDALAQLRVQPSESGF
Ga0182032_103981122	3300016357	Soil	MNQITRELNQRSDGEKLAPEQLNGLIRAGYVYWNGYEPFLTDKGRDALAQLGVQPGESGF
Ga0182037_116470701	3300016404	Soil	LAGEKLTPEQLKGLIRADYIYRSGDEHHLTARGREVLAQAGPKPEPAH
Ga0182038_107429642	3300016445	Soil	RMNQITRELNQRSDGEKLAPEQLNGLIRAGYVYWNGYEPFLTDKGRDAQAQLGVQPDESS
Ga0187879_108159132	3300017946	Peatland	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYLYRNGDEHFLTDKGRDALAELRAPPGDYSRRTPSCIVRP
Ga0187863_104293561	3300018034	Peatland	GRMKQMIRELKRQVAGETLAPEQLKGLIRAGYVYRNGEEHLLTDMGREALAQPGVYPMVELPAPL
Ga0187871_102829782	3300018042	Peatland	MNQISRELKRQAAGEKLAPEQLKGLIRAGYLYRNGDEHFLTDKGRDALAQLRVQPGDGLAEIR
Ga0187871_104587931	3300018042	Peatland	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGREALAQPGVYPMVELPVPL
Ga0210407_114823842	3300020579	Soil	IIRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDEGRDALARSGVQTGVPQ
Ga0210395_103696532	3300020582	Soil	MNQIIRELNQRSDGEKLAPEQLNGLIRAGYVYWNGYEPFLTDKGRDALAQLGVQPGESGF
Ga0179596_106790071	3300021086	Vadose Zone Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGHDALAQPGVYPGGQSSEAT
Ga0210404_105476852	3300021088	Soil	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGESGF
Ga0210408_109224581	3300021178	Soil	MNQIIRKLKRKSAGEKLVPEQAKALIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGESGF
Ga0213875_106349922	3300021388	Plant Roots	MNQIIRELKRLSVGEKLAPERLRGLIGAGYVYRNGYEPFPTDKGGDAWAQLRVPPGEPGF
Ga0210393_105260132	3300021401	Soil	MKQMIRELKRQVAGETLAPEQLKGLIRAGYVYRNGEEHLLTDMGREALAQPGV
Ga0210387_100715483	3300021405	Soil	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHFLTDRGRDALAELRAPPGDYSRRTPSCIVRP
Ga0210387_101982263	3300021405	Soil	MKQIIRELKRHVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGREALAQPGVYPRVEH
Ga0210387_102690622	3300021405	Soil	MKQMIRELKRQVAGETLAPEQLKGLIRAGYVYRNGEEHLLTDMGREALAQPGVYPMVELPAPL
Ga0210394_110531831	3300021420	Soil	MNQIIRKLKWKSAGEKLVPEQAKALIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGESGF
Ga0210402_101512571	3300021478	Soil	MNQIIRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDKGHDALAQPGVYPRVEH
Ga0210402_103280793	3300021478	Soil	MSQIIRELKRQAAGEKLAPEQLKALIRAGYVYRNGDEHLLTDKGRDALARLGVQPGDSTLADDIRH
Ga0210402_107124402	3300021478	Soil	MNQIIRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDEGRDALARSGVQTGVPQ
Ga0210402_107297681	3300021478	Soil	MKQIIRELKQQAAGENMEPEKLKGLIRAGYVYRNGNVHLLTGMGRDALAQPGVYPGREP
Ga0210402_110370591	3300021478	Soil	VNQIIRELKRQAAGEKLAPEQLKSLIRAGYVYRNGDEHLLTDKGRDALAQSGVQPGVAQ
Ga0210402_110848831	3300021478	Soil	MNQIMRELVRQVAGDALAPEQLQGLIRAGYVCRNGEDHILTDKGRDALARSGVVTPPAPSGQ
Ga0210402_119886911	3300021478	Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYVYRNGDEHLLTDMGRDALAQPGVYPSNS
Ga0242662_102818001	3300022533	Soil	IRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDEGRDALARSGVQTGVPQ
Ga0207693_108055462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKQIIRELKRHAASEKLEPGQLKGLIRAGYVYRNGDQLTEMGRHALAQNRRGVRAPRGITGAA
Ga0209871_11132271	3300026217	Permafrost Soil	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGREALAQPGVYPRVEH
Ga0209890_100895942	3300026291	Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYVYRNDDEHLLTDQGRQALAQPGVYPGAAH
Ga0209839_101210182	3300026294	Soil	MNQIIRELKRQAAGEKLAPEQLKELIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGDGTLAE
Ga0209734_10583531	3300027535	Forest Soil	MNPIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLRVQPGESGF
Ga0208042_11360742	3300027568	Peatlands Soil	MNQVIRELKRHAAGEKLAPEQLEGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQLLPQWRCEPRD
Ga0209446_10839391	3300027698	Bog Forest Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYIYRNGDEHLLTDMGRDALAQPGVYPSGEPPGIEIVGALGHPGE
Ga0209488_104746782	3300027903	Vadose Zone Soil	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYIYRNGDEHLLTGMGRDALAQPGVYPGGQSSEAT
Ga0209006_100227543	3300027908	Forest Soil	MDQIMRELTRQVAGAALAPEQLQGLIRAGYVYRNGDDHILTDKGRDALARAGVVTPPAKE
Ga0209006_100615294	3300027908	Forest Soil	MDQIMRELVRKVSGGALAPEQIQGLIRAGYVYRNGEDHILTDKGRDALVRSGIVMPPATDCQC
Ga0209583_100617014	3300027910	Watersheds	MNQVIRELKRLVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGRDALAQPGVYPGGECSEAT
Ga0302225_104955242	3300028780	Palsa	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYLYRNDDEHLLTDQGRQALARLGVHPGAETTAR
Ga0302232_104608132	3300028789	Palsa	MKQIIRELKRQAAGEKLEPEQLEGLIRAGYVYRNDDEHLLTDQGRQALARPGV
Ga0311369_103038361	3300029910	Palsa	MKQIIRELKRQVAGEKLEPEQLKGLIRAGYLYRNDDEHLLTDQGRQALARLGLHPGAETTAR
Ga0311352_105551012	3300029944	Palsa	MKQIIRELKRQVAGEKLDPEQLKGLIRAGYVYRNEDEHLLTDQGRQALAQPGVYPGVTH
Ga0311339_101513631	3300029999	Palsa	MNQIIRELKRQSAGEKLEPEQLKALIRAGYVYRNGDEHFLTELGRDAPAKPGVYPSRE
Ga0311338_120654131	3300030007	Palsa	GPSAFKRRVGRVKQIIRELKRRAAGETLEPEQLKGLIRARYVYRNDDEHLLTDQGRQALARPGVYPGVAH
Ga0302179_100383993	3300030058	Palsa	MNQIIRELKRQSAGEKLEPEQLKALIRAGYVYRNGDEHFLTELGRDAPAKPGVPRANQGETAATI
Ga0311353_116241071	3300030399	Palsa	RPGRMKQIIRELKRQVAGEKLEPEQLKGLIRAGYLYRNDDEHLLTDQGRQALARLGLHPGAETTAR
Ga0311370_104026361	3300030503	Palsa	MKQIIRELKRQAAGEKLEPEQLEGLIRAGYVYRNDDEHLLTDQGRQALARPGVYPGAETTARMKSPGGRPI
Ga0170824_1018556012	3300031231	Forest Soil	MKQIIRELKRQAAGEKLEPEQLKGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQPGDST
Ga0302307_104979971	3300031233	Palsa	MKQIIRELKRQAAGEKLEPEQLEGLIRAGYVYRNDDEHLLTDQGRQALARPGVYPGAETTARMKSPGG
Ga0310686_1008270513	3300031708	Soil	VGRMKQIIRELKRHVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDIRREALAQPGVYPRVEH
Ga0310686_1150125162	3300031708	Soil	MSQIIRELKRQAAGEKLSPEQLKALIRAGYIYRNGDEHHLTTEGREALAQAGVNAARDVL
Ga0318521_107578761	3300031770	Soil	MEQIIRELERQLAGEKLTPEQLKGLIRADYIYRSGDEHHLTARGREVLAQAGPKPEPAH
Ga0306925_105366953	3300031890	Soil	VNQIIRELKRLFAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDKGRDALAQPGVYPRVER
Ga0302322_1007335801	3300031902	Fen	MKQMIRELKRQVAGEKLEPEQLKGLIRAGYVYRNGDEHLLTGMGRDALAQPGVYPGGECSEAT
Ga0302322_1020752651	3300031902	Fen	MNQTIRELKRQFAGERLAPEQLKGLIRAGYVYRNGDEHLLTDKGRDALAQPGV
Ga0306921_125083741	3300031912	Soil	MEQIIRELERQLAGEKLTPEQLKGLIRADYIYRSGDDHHLTARGREALARV
Ga0310912_114839961	3300031941	Soil	MEQIIRELKRQLAGEKLTPEQLKGLIRADYIYRSGDEHHLTARGREVLAQAGPKPEPAH
Ga0306922_109484181	3300032001	Soil	QLAGEKLTPEQLKGLIRADYIYRSGDEHHLTARGREVLAQAGPKPEPAH
Ga0306922_117136192	3300032001	Soil	MNQITRELNQRSDGEKLAPEQLNGLIRAGYVYWNGYEPFPTDKGRDALAQLGVQPGESGF
Ga0311301_105077982	3300032160	Peatlands Soil	MKQIVRELKRLVAGEKLEPEQLRGLIRAGYVYRNGDEHLLTDKGREALAQPGVYPRVEH
Ga0311301_105500431	3300032160	Peatlands Soil	MKQIIRELKRQVAGEKLEPEQLRALIRAGYVYRNGDEHLLTDMGRDALAQPGVYPKVEH
Ga0311301_109534961	3300032160	Peatlands Soil	MNQVIRELKRHAAGEKLAPEQLEGLIRAGYVYRNGDEHFLTDKGRDALAQLGVQLLPQWRSEPRD
Ga0311301_110017002	3300032160	Peatlands Soil	MKQIIRELKRQVAGEKLEPEQLRALVRAGYVYRNGDEHLLTDMGREALAQPGVYPRVEQ
Ga0311301_110810981	3300032160	Peatlands Soil	MNQIIRKLKRQAAGEKLSPEQLKALIRAGYIYRNGDEHHLTTEGREALAQAGVNAARDVL
Ga0311301_127162082	3300032160	Peatlands Soil	MNQIIRELKRQAAGEKLAPEQLKGLIRAGYVYRNGHEHFLTDKGRDALA
Ga0307471_1026205421	3300032180	Hardwood Forest Soil	MNQIIRELKRQAAGKKLAPEQLKALIRAGYVYRNGDEHFLTDKGRDALAQLGVQPGDSTLVDDHPPLTP
Ga0335081_109167461	3300032892	Soil	MKQIIRELKRQVAGEKLEPELLKGLIRAGYVYRNGYEHLLTDMGRNALSQPGVYPSGEPPGIEIVGALGHPGE
Ga0335081_124410041	3300032892	Soil	MNQIIRELKRQAAGERLAPEQLKALIRAGYVYRNGDAHFLTDKGRDALAQLGVQPGDSTLPDDLRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences