NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F067875

Metagenome Family F067875

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067875
Family Type Metagenome
Number of Sequences 125
Average Sequence Length 53 residues
Representative Sequence MLQRRKYPYLANVLLVIAIFSIQAAAQDKNIWNEYRPSLVFAMPINEKWNAWQ
Number of Associated Samples 97
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 5.60 %
% of genes from short scaffolds (< 2000 bps) 4.80 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (94.400 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(8.800 % of family members)
Environment Ontology (ENVO) Unclassified
(52.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(70.400 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 53.09%    β-sheet: 0.00%    Coil/Unstructured: 46.91%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF01648ACPS 19.20
PF14357DUF4404 12.00
PF00072Response_reg 0.80
PF10677DUF2490 0.80
PF13505OMP_b-brl 0.80
PF01988VIT1 0.80
PF13416SBP_bac_8 0.80
PF08818DUF1801 0.80
PF05857TraX 0.80
PF04055Radical_SAM 0.80
PF13424TPR_12 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG1633Rubrerythrin, includes spore coat protein YhjRInorganic ion transport and metabolism [P] 0.80
COG1814Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 familyInorganic ion transport and metabolism [P] 0.80
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.80
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.80
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.80


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.40 %
All OrganismsrootAll Organisms5.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005328|Ga0070676_10151141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1486Open in IMG/M
3300010399|Ga0134127_10246839All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1689Open in IMG/M
3300013100|Ga0157373_10330037All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1086Open in IMG/M
3300025907|Ga0207645_10427431All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium893Open in IMG/M
3300025908|Ga0207643_10041442All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2594Open in IMG/M
3300025930|Ga0207701_10416709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1156Open in IMG/M
3300032013|Ga0310906_10101639All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1578Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil6.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.40%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere2.40%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2067725000Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027637Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027639Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPWRP_003115602067725000SoilVEGLPDAAARKYLYLANVLLVIAIFSIRTAAQDNNITNEYRVTATSAMPIN
F47_076977002170459009Grass SoilMLRRKKYSYLANVLLVIAIFSINAAAQDRNIWNEYRLTVTSAM
INPhiseqgaiiFebDRAFT_10160144213300000364SoilMLQRRKYPYHANLLLVIAIFSIPTAAQDRNIWNEY
JGI10214J12806_1186427623300000891SoilMLRRRKYPYLANILLVIPIFSIQAAAQDRNIWNEYRPSL
JGI1027J12803_10127189313300000955SoilMPQRKNSYIATVLLLITLFSIQAAAQDKNIWQEYRPSL
F14TB_10367134013300001431SoilMLQRSKYPYLDLANVLLIIALFSGHAAAQDKNIWNEYRPSLVFAMPINEKWIAWQ
Ga0062590_10263689213300004157SoilMLRRRKYPYLANILLVIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNV
Ga0062591_10112820313300004643SoilMRQRRKYLYLANVLLVIAVFSTPAAAQDKNIWQEYRPSIIAAM
Ga0062594_10120080223300005093SoilMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAM
Ga0062594_10248166523300005093SoilMLRRREYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSIIAAMPVNEK
Ga0062594_10266396713300005093SoilMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAM
Ga0065704_1060138413300005289Switchgrass RhizosphereMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLV
Ga0065707_1018293713300005295Switchgrass RhizosphereVIKKEPGVFQMLQRRKYPYLANVLLVIAIFSIQAAAQDKNIWNEYRPSLVFA
Ga0070676_1015114123300005328Miscanthus RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEK
Ga0070690_10073514023300005330Switchgrass RhizosphereMLQRQKYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSIIAAMPVNEKVILFQYNVLIYAPEKKLTTIGV
Ga0070690_10155988323300005330Switchgrass RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLV
Ga0070666_1073149523300005335Switchgrass RhizosphereMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAM
Ga0070680_10143924613300005336Corn RhizosphereMPHRRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMP
Ga0070682_10114285813300005337Corn RhizosphereMPHRRKYQYIAKVLLVIAILSTQATAQDKNVWNEYRPSLVFAMP
Ga0070687_10010933513300005343Switchgrass RhizosphereMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAMP
Ga0070692_1065707313300005345Corn, Switchgrass And Miscanthus RhizosphereMLRRRKYPYLANILLVIPIFSIQAAAQDRNIWNEYRPSLISAMH*
Ga0070669_10003194753300005353Switchgrass RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMP
Ga0070669_10105347813300005353Switchgrass RhizosphereMLERRKYSYLANVLLVLAICAIQAAAQDRNIWNEYRPSLVFAMPIN
Ga0070675_10182146323300005354Miscanthus RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTP
Ga0070673_10081471123300005364Switchgrass RhizosphereMPQCRKYLYLANVLLVISIFSRYAAAQDNNIWDEYRPSVIVAMPVNEKWILFQYNVL
Ga0070688_10180638613300005365Switchgrass RhizosphereMPQCRKYLYLANVLLVISIFSRYAAAQDNNIWDEYRPSVIVAMPV
Ga0070694_10005216833300005444Corn, Switchgrass And Miscanthus RhizosphereMLERRTYSYLANVLLVIAIFSIHAAAQDRNIWNEYRPSLISAM
Ga0070662_10133562123300005457Corn RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPINEKWIAWQYNVV
Ga0068867_10067131413300005459Miscanthus RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYA
Ga0070695_10089483023300005545Corn, Switchgrass And Miscanthus RhizosphereMLRPRKYSYLGNVLLVIAVFSIHGAAQDKNIWQEYRPSIILAMPVNQ
Ga0070696_10107066223300005546Corn, Switchgrass And Miscanthus RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKLTT
Ga0070696_10159247013300005546Corn, Switchgrass And Miscanthus RhizosphereMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVLVY
Ga0068854_10095462823300005578Corn RhizosphereMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEK
Ga0068854_10142944523300005578Corn RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFAMPI
Ga0068852_10038571233300005616Corn RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAM
Ga0068864_10045733033300005618Switchgrass RhizosphereMLWSRNYSYLAKVPLLIAMFSINVTAQNNNIWNEYRPSLIAAMPINEKWIAWQYNVLVYAPEKKLTTLGVTG
Ga0068864_10260605023300005618Switchgrass RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQ
Ga0068864_10260605223300005618Switchgrass RhizosphereMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQ
Ga0068866_1061153913300005718Miscanthus RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTPIN
Ga0068861_10038576213300005719Switchgrass RhizosphereMLRRREYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSII
Ga0068858_10051513013300005842Switchgrass RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPI
Ga0068860_10044923413300005843Switchgrass RhizosphereMLRRRKYPYHANVLLVIAIVSIQAAAQDNNIWNEYRPSLVFAMPINEKWIAWQYNVLVYA
Ga0068860_10105083423300005843Switchgrass RhizosphereMLQLRKYRYLANVLLVIAIFSIQTPAQDKNIWNEYRPSLVFAMP
Ga0068862_10098855613300005844Switchgrass RhizosphereMLRRRKYPYHANVLLVIAIVSIQAAAQDNNIWHEYRPSLVFAMPINEKWIAWQYNVLVYA
Ga0075432_1043720713300006058Populus RhizosphereMPKRRKYIYLANVLLVIAIFSIPAAAQDKNIWQEYRPSIIMAMPVNEKVILFQYNVVIY
Ga0097621_100001967133300006237Miscanthus RhizosphereMPQPKYSYIATVFLLIAIFSRLTAAQDKDKNIWQEYRPSLVFAMPIN
Ga0068871_10093961023300006358Miscanthus RhizosphereMRQRRKYLYLANVLLVIAVFSTPAAAQDKNIWQEYRPSII
Ga0075428_10095038723300006844Populus RhizosphereMLQRRKYVYLANVLLVIAIFSIPATAQDKNIWQEYRPSIIMAMPVNEKVIL
Ga0079217_1076577523300006876Agricultural SoilMLRRRKYSYLANILLVIAVFSIPTAAQDQNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKKL
Ga0068865_10115852623300006881Miscanthus RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTPINRKWIAWQYNVIVYS
Ga0079215_1014839413300006894Agricultural SoilMPWRRKYPYLAKVLLLIAILSINAAAQDQNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKKLTT
Ga0079215_1092427923300006894Agricultural SoilMLRRRKYSYLANILLVIAVFSIPTAAQDQNIWNEYRPSLVFAMPINEKWIAWQYNVLVYA
Ga0079218_1200412823300007004Agricultural SoilMLRRRKYLYLANVLLGIAILSTTVAAQDKNIWQEYRP
Ga0105245_1140451213300009098Miscanthus RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTPINRKWIAWQYNVIVYSPEKKLT
Ga0105243_1011122153300009148Miscanthus RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEY
Ga0105243_1313843413300009148Miscanthus RhizosphereMLQRRKYLYLANVLLVIAVFSTPAAAQDKNIWQEYRPSIIAAMPVNEKVIIF
Ga0111538_1117996013300009156Populus RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINQKWIAWQYNVLV
Ga0111538_1169726723300009156Populus RhizosphereMLQRRRYPYLTNVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPE
Ga0105242_1159163513300009176Miscanthus RhizosphereMPQRRKYLYLANVVLVIAVFSIHAAAQDKNIWQEYR
Ga0105242_1270455123300009176Miscanthus RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKK
Ga0105242_1270455223300009176Miscanthus RhizosphereMPHRRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKK
Ga0105248_1188710323300009177Switchgrass RhizosphereMLRRKKNSYLASVLLVIAFFAIPAGAQDRNIWQEYRPSLVFAMPINEKWIAWQYTLGVYAPEKKLTTFGLAGPGI
Ga0134124_1257157623300010397Terrestrial SoilMLQRRKYLYLANVLLVIAVFSTPAAAQDKNIWQEYRPSIIVAMPVNEKVILFQYNVVIYAPEKKL
Ga0134127_1024683913300010399Terrestrial SoilMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVY
Ga0134122_1188681413300010400Terrestrial SoilMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEK
Ga0134121_1070213913300010401Terrestrial SoilMPHRRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVL
Ga0134123_1271562213300010403Terrestrial SoilMLLPRKYSYATVLLVIVVFSIHAEAQDKKNKNIWQEYRPSIISAMPINEKLILFQYNVLIYAPEKKLTTIG
Ga0105246_1021174213300011119Miscanthus RhizosphereMPQRRKYLCLANVVLVIAVFSIPAAAQDKNIWQEYRPSIIVARPVNEKVILFQYNVVIYAP*
Ga0157316_108297513300012510Arabidopsis RhizosphereMLQRKYSYVATVLLLITLFSIHAAAQDKNIWQEYRPSLVFAMPINEKWIAWQYNVVVYSPEKKF
Ga0157294_1019731023300012892SoilMLRRKKHSYLASGLLVIAILSIRGAAQDKNIWQEYRPSLVFAMPIIEKWIAWQYTLGVYAPEKKLTTFGLAGPGI
Ga0164302_1142351823300012961SoilMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFAMPINQKWIAWQYNVIVYSPEKK
Ga0164302_1194472213300012961SoilMLQRRKYPYLANVLLVIAIFSIQAAAQDKNIWNEYRPSLVFAMPINEKWNAWQ*
Ga0164308_1141998423300012985SoilMPHRRKYQYIAKVVLVIAILSTQATAQDKNIWNEYRPSLVFAMPI
Ga0157373_1033003713300013100Corn RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQ
Ga0157378_1007366953300013297Miscanthus RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQY
Ga0157378_1169218013300013297Miscanthus RhizosphereMLQRRKYPYLANVLLVIAIFSLQAAAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVVVYAPEKKLTTV
Ga0163162_1178883223300013306Switchgrass RhizosphereMLRRREYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSIIAAM
Ga0157375_1344570413300013308Miscanthus RhizosphereMLQLRKYRYLANVLLVIAIFSIQTPAQDKNIWNEYRP
Ga0157375_1356998613300013308Miscanthus RhizosphereMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKLTTIGVTMPG
Ga0157379_1025480133300014968Switchgrass RhizosphereMPLPRKYPYLANVLLVIALFSIHAAAQDKNIWQEYRPSIIL
Ga0132258_10003878223300015371Arabidopsis RhizosphereMLQRRKYPCLANVLLVIAIFSIQAPAQEKNIWNEYRPSLVFAMPINEKWIAWQYNVVVYAPEKK
Ga0132256_10169142813300015372Arabidopsis RhizosphereMRQRRRYRYHANVLLVIAIFSIQAAAQDNNIWNEYRPSLVFAMPINEKWIA
Ga0132256_10184500613300015372Arabidopsis RhizosphereMPQRREYLYLANVLLVIAIFSIHAAAQDKNIWQEYRPSVILAMPVNEKVILFQYN
Ga0132256_10220762613300015372Arabidopsis RhizosphereMLQRRKYPHLANVLLVIAIFSIHAAAQDRNIWNEYRP
Ga0132257_10058616613300015373Arabidopsis RhizosphereMLRRRKYPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFAMPINEKWIAWQYNV
Ga0163161_1040246223300017792Switchgrass RhizosphereMLQLRKYRYLANVLLVIAIFSIQTPAQDKNIWNEYRPSLVFAMPI
Ga0163161_1143192923300017792Switchgrass RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPINE
Ga0190274_1278716213300018476SoilMLRRKKNSYLASVLLVIAFFAIPAAAQDRNIWQEYRPSLV
Ga0207645_1042743123300025907Miscanthus RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNV
Ga0207645_1047945513300025907Miscanthus RhizosphereMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNV
Ga0207643_1004144213300025908Miscanthus RhizosphereMLHRRRYPFLANVLLVMAICAIDAAAQDKNIWQEYRPSLVFAMPIN
Ga0207662_1008362243300025918Switchgrass RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKKLTTLG
Ga0207681_1092678623300025923Switchgrass RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDKNIWNEYRPSL
Ga0207681_1116577823300025923Switchgrass RhizosphereMLRRRKYPYLANILLAIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKL
Ga0207650_1112270223300025925Switchgrass RhizosphereMLWSRNYSYLAKVPLLIAMFSINVTAQNNNIWNEYRPSLIAAMPINEKWIAWQYNVLVYAPEKKLTT
Ga0207701_1041670913300025930Corn, Switchgrass And Miscanthus RhizosphereMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPIN
Ga0207704_1101781723300025938Miscanthus RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTPINRKWIAWQYNVIVYSPEKKLTT
Ga0207691_1098033623300025940Miscanthus RhizosphereMLEHRTYSYLANVLLVIAIFSIHAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLIYA
Ga0207711_1005714563300025941Switchgrass RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPINEKWIAWQYNVVVYSP
Ga0207711_1138935613300025941Switchgrass RhizosphereMPQCRKYLYLANILLVLAVFSIPAAAQDKNIWQEYRPSIIVAMQVNEKL
Ga0207651_1201735713300025960Switchgrass RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFGTPINRKWIAWQYNVIVYSPEKKLTTI
Ga0207640_1119756613300025981Corn RhizosphereMLQRRKCPYLANVLFVLAIFSIQVAAQDRNIWNEYRPSLVFAMPINEKWIAWQYNVVVYA
Ga0207640_1190702613300025981Corn RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPINEKWIAWQYNVVVYS
Ga0207658_1005745253300025986Switchgrass RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYN
Ga0207658_1139097913300025986Switchgrass RhizosphereMRQRRKYRYHANVLLVIAIFSIQAAAQDNNIWNEYRPSLVFAMPI
Ga0207677_1084730423300026023Miscanthus RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINEKWIAWQYNVLVYAPEKKLTTLGVT
Ga0207708_1046301323300026075Corn, Switchgrass And Miscanthus RhizosphereMLPRREYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSIIAAMPVNEKVILFQYNVLIYAPEKKLTTI
Ga0207708_1125954213300026075Corn, Switchgrass And Miscanthus RhizosphereMLRRRKYPYLANILLAIPIFSIHAAAQDRNIWNEYRPSLISAMPINEK
Ga0207648_1137208313300026089Miscanthus RhizosphereMLWPRKYSYLGNVLLVIAVFSIPAAAQDKNIWQEYRPSIIVAMPVNEKLILFQYNVVIYAPE
Ga0207676_1025511333300026095Switchgrass RhizosphereMPQRKYSYTATVLLLITLFSIHTAAQDKNIWQEYRPSLVFAMPINEKWIAWQYNVVVY
Ga0207675_10136327233300026118Switchgrass RhizosphereMLRRREYLYLANVLLVIAIFSIHTAAQDKNIWQEYRPSIIAAMPVNEKLILFQYNVLIYA
Ga0209818_117511413300027637Agricultural SoilMLRRRKYSYLANILLVIAVFSIPTAAQDQNIWNEYRPSLVFAMPIN
Ga0209387_115967323300027639Agricultural SoilMLRRRKYSYLANILLVIAVFSIPTAAQDQNIWNEYRPSLVF
Ga0209486_1005776313300027886Agricultural SoilMLRRRKYSYLANILLVIAVFSIPTAAQDQNIWNEYRP
Ga0209486_1106107223300027886Agricultural SoilMLRRRKYLYLANVLLGIAILSTTVAAQDKNIWQEYRPSIIAAMPINEKLILFQYNVLIHAPEKKLTTI
Ga0268266_1118839823300028379Switchgrass RhizosphereMPHLRKYQYIAKVLLVIAILSTQATAQDKNIWNEYRPSLVFAMPINE
Ga0170824_11758331013300031231Forest SoilMPELRKYLYLANILLIIAIFSIDAAAQDKNIWQEYRPSVIVAMPVNEKLILFQYNVVIYAPEKKLTT
Ga0310888_1000575213300031538SoilMLRRRKYSYLANVLLVIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKLTTLGVTMPGI
Ga0307468_10246991013300031740Hardwood Forest SoilMLRRRKYPCLVYALLVIAIFSINAAAQDKDKNNNIWQEYRPSIIAAMPINEKWIV
Ga0310900_1129424313300031908SoilMLRRRKYSYLANLLLVIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYN
Ga0310900_1147787213300031908SoilMLRLRKYLYLANVLLLIAVFSIHAAAQDRNIWNEYRPSLISAMPINER
Ga0310897_1036916813300032003SoilMLHRRRYPFLANVLLVIAIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKL
Ga0310906_1010163913300032013SoilMLRRRKYSYLANVLLVIPIFSIQAAAQDRNIWNEYR
Ga0310889_1001008733300032179SoilMLRRRKYSYLANVLLVIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKWIAWQYNVLVYAPEKKL
Ga0310896_1006205623300032211SoilMLRRRKYSYLANVLLVIPIFSIQAAAQDRNIWNEYRPSLISAMPINEKW


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