Metagenome / Metatranscriptome Family F067874

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067874
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	68 residues
Representative Sequence	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA
Number of Associated Samples	93
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.40 %
% of genes near scaffold ends (potentially truncated)	36.80 %
% of genes from short scaffolds (< 2000 bps)	80.80 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.400 % of family members)
Environment Ontology (ENVO)	Unclassified (72.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04349	MdoG	28.00
PF00535	Glycos_transf_2	12.80
PF13632	Glyco_trans_2_3	7.20
PF13641	Glyco_tranf_2_3	2.40
PF01120	Alpha_L_fucos	0.80
PF13507	GATase_5	0.80
PF00196	GerE	0.80
PF06964	Alpha-L-AF_C	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3131	Periplasmic glucan biosynthesis protein OpgG	Cell wall/membrane/envelope biogenesis [M]	28.00
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	0.80
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.80 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.00 %
Unclassified	root	N/A	10.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	55.20 %
Unclassified	root	N/A	10.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.20 %
Unclassified	root	N/A	10.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11067854	Not Available	741	Open in IMG/M
3300000956\|JGI10216J12902_111617117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300003323\|rootH1_10016943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300004156\|Ga0062589_101546138	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300004463\|Ga0063356_100836202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1290	Open in IMG/M
3300005327\|Ga0070658_10150468	Not Available	1948	Open in IMG/M
3300005330\|Ga0070690_100141629	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300005331\|Ga0070670_100142617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2072	Open in IMG/M
3300005334\|Ga0068869_100178664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1663	Open in IMG/M
3300005335\|Ga0070666_10081290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2215	Open in IMG/M
3300005337\|Ga0070682_100532114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300005337\|Ga0070682_101384865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300005338\|Ga0068868_102356771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300005347\|Ga0070668_101666703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300005347\|Ga0070668_102010500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	533	Open in IMG/M
3300005353\|Ga0070669_100421047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300005354\|Ga0070675_100136011	Not Available	2097	Open in IMG/M
3300005354\|Ga0070675_101469889	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300005356\|Ga0070674_100189931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1580	Open in IMG/M
3300005356\|Ga0070674_100203510	Not Available	1530	Open in IMG/M
3300005356\|Ga0070674_100593534	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300005364\|Ga0070673_100277443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1469	Open in IMG/M
3300005364\|Ga0070673_100881713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	829	Open in IMG/M
3300005437\|Ga0070710_10784951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300005455\|Ga0070663_100274215	Not Available	1342	Open in IMG/M
3300005455\|Ga0070663_101550369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300005456\|Ga0070678_100407711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1182	Open in IMG/M
3300005456\|Ga0070678_100960332	Not Available	784	Open in IMG/M
3300005456\|Ga0070678_101115556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	729	Open in IMG/M
3300005539\|Ga0068853_101042507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300005547\|Ga0070693_100293519	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300005547\|Ga0070693_100937842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300005548\|Ga0070665_100105002	All Organisms → cellular organisms → Bacteria → Proteobacteria	2827	Open in IMG/M
3300005563\|Ga0068855_100376430	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300005577\|Ga0068857_100200497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1819	Open in IMG/M
3300005844\|Ga0068862_100723401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300006237\|Ga0097621_100002147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13495	Open in IMG/M
3300006237\|Ga0097621_100039580	All Organisms → cellular organisms → Bacteria → Proteobacteria	3787	Open in IMG/M
3300006237\|Ga0097621_100040872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3730	Open in IMG/M
3300006358\|Ga0068871_100001608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15194	Open in IMG/M
3300006358\|Ga0068871_102200234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300006581\|Ga0074048_11253498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300009093\|Ga0105240_10052507	All Organisms → cellular organisms → Bacteria → Proteobacteria	5124	Open in IMG/M
3300009098\|Ga0105245_11399818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300009137\|Ga0066709_104172954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300009176\|Ga0105242_10420342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1252	Open in IMG/M
3300009176\|Ga0105242_11125692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300009177\|Ga0105248_11851454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300009545\|Ga0105237_10548396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1163	Open in IMG/M
3300009551\|Ga0105238_12121046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300010375\|Ga0105239_11792174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300010400\|Ga0134122_13419327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300011120\|Ga0150983_12926715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300012212\|Ga0150985_109175464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300012469\|Ga0150984_100264852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300012469\|Ga0150984_109005056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300012469\|Ga0150984_114132159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300012533\|Ga0138256_10633301	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300012916\|Ga0157310_10047817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300012925\|Ga0137419_11801269	Not Available	524	Open in IMG/M
3300012927\|Ga0137416_11122682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300012944\|Ga0137410_12123821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300012956\|Ga0154020_10498578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1019	Open in IMG/M
3300013105\|Ga0157369_10526301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1223	Open in IMG/M
3300013296\|Ga0157374_11190609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	783	Open in IMG/M
3300013297\|Ga0157378_10338688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300013297\|Ga0157378_10865380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	933	Open in IMG/M
3300013306\|Ga0163162_10049701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4203	Open in IMG/M
3300013306\|Ga0163162_10139547	All Organisms → cellular organisms → Bacteria → Proteobacteria	2536	Open in IMG/M
3300013306\|Ga0163162_10754763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300013306\|Ga0163162_11101535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300013308\|Ga0157375_12106435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300013308\|Ga0157375_13432106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300013308\|Ga0157375_13548503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300014326\|Ga0157380_10115951	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300014745\|Ga0157377_11021014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300015189\|Ga0167667_1005715	All Organisms → cellular organisms → Bacteria → Proteobacteria	3948	Open in IMG/M
3300015373\|Ga0132257_101834106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300015374\|Ga0132255_102226894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300020027\|Ga0193752_1012168	All Organisms → cellular organisms → Bacteria → Proteobacteria	4439	Open in IMG/M
3300020027\|Ga0193752_1018947	All Organisms → cellular organisms → Bacteria → Proteobacteria	3331	Open in IMG/M
3300020034\|Ga0193753_10174167	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300020034\|Ga0193753_10372951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300020195\|Ga0163150_10149942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1339	Open in IMG/M
3300020579\|Ga0210407_11144564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300021170\|Ga0210400_10043282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3498	Open in IMG/M
3300021363\|Ga0193699_10124337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300023097\|Ga0247757_10253417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300025899\|Ga0207642_10708505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300025903\|Ga0207680_10060911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2300	Open in IMG/M
3300025909\|Ga0207705_10180904	Not Available	1591	Open in IMG/M
3300025911\|Ga0207654_10249120	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300025911\|Ga0207654_10264384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1158	Open in IMG/M
3300025913\|Ga0207695_10105679	All Organisms → cellular organisms → Bacteria → Proteobacteria	2802	Open in IMG/M
3300025914\|Ga0207671_10767228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300025921\|Ga0207652_10862816	Not Available	801	Open in IMG/M
3300025923\|Ga0207681_10345520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300025924\|Ga0207694_11851233	Not Available	507	Open in IMG/M
3300025925\|Ga0207650_10229225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1498	Open in IMG/M
3300025925\|Ga0207650_10923949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300025926\|Ga0207659_10082182	All Organisms → cellular organisms → Bacteria → Proteobacteria	2384	Open in IMG/M
3300025933\|Ga0207706_10305052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1387	Open in IMG/M
3300025934\|Ga0207686_10174894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1517	Open in IMG/M
3300025934\|Ga0207686_10778783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300025935\|Ga0207709_11769594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300025937\|Ga0207669_10050995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2477	Open in IMG/M
3300025937\|Ga0207669_10539551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300025942\|Ga0207689_10074329	All Organisms → cellular organisms → Bacteria → Proteobacteria	2792	Open in IMG/M
3300025944\|Ga0207661_10570568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300025972\|Ga0207668_10737295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300026089\|Ga0207648_10172941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1910	Open in IMG/M
3300026121\|Ga0207683_10390762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300026121\|Ga0207683_10997775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300026142\|Ga0207698_12583724	Not Available	517	Open in IMG/M
3300026320\|Ga0209131_1178126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300026947\|Ga0207853_1002181	All Organisms → cellular organisms → Bacteria → Proteobacteria	3319	Open in IMG/M
3300028380\|Ga0268265_10621962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300028380\|Ga0268265_12044977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300028786\|Ga0307517_10070952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3130	Open in IMG/M
3300031231\|Ga0170824_117074366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300031231\|Ga0170824_126376659	Not Available	601	Open in IMG/M
3300031938\|Ga0308175_100740501	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300032174\|Ga0307470_10298442	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300033475\|Ga0310811_10202359	Not Available	2421	Open in IMG/M
3300033475\|Ga0310811_10718569	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	68.80%
Environmental	Environmental	29.60%
Engineered	Engineered	1.60%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	68.80%
Terrestrial	Environmental → Terrestrial	28.80%
Wastewater	Engineered → Wastewater	1.60%
Aquatic	Environmental → Aquatic	0.80%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	43.20%
Soil	Environmental → Terrestrial → Soil	28.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Roots	Host-Associated → Plants → Roots	4.80%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.80%
Rhizome	Host-Associated → Plants → Rhizome	0.80%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.60%
Loam	Environmental → Terrestrial → Soil → Loam	8.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	4.00%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.60%
Lake	Environmental → Aquatic → Freshwater → Lake	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	4.00%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	4.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.80%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.80%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_110678541	3300000891	Soil	MDSQSRAFEAPVEEYSTGTPLRCPRPMTAQSLVPWTPSRAVAALFMTMVVRPVQLAPAMQAAAVPDIAP
JGI10216J12902_1116171172	3300000956	Soil	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA*
rootH1_100169432	3300003323	Sugarcane Root And Bulk Soil	MDSQSRAFEAPVEEPFSGTPLRCPRRMNAQPLVPWTPGRILTVFLLALVSMPAQLAPVVLNRRRA*
Ga0062589_1015461381	3300004156	Soil	SFSPYCHVLLPRSNGLQLLGLKMDSQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA*
Ga0063356_1008362021	3300004463	Arabidopsis Thaliana Rhizosphere	QMDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRIVVALLVALISVPAQLAPAVINRRRA*
Ga0070658_101504682	3300005327	Corn Rhizosphere	MDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALVSVPAQLAPAVINRRRA*
Ga0070690_1001416292	3300005330	Switchgrass Rhizosphere	MGDKLLGLKMDSQSRAFEAPVETVIAGTPLRCPRPMTAQALVPWTPGRILVAFFTTLLSVPAQLAPALNRRRA*
Ga0070670_1001426172	3300005331	Switchgrass Rhizosphere	MFLPYCHVSLPMSEGRFLLGLQMDSESRLFEAPVEASLTGTPLRCPRPMTAQPLVPWTLGRIAVACLTALILVPVQLAPAVINRRRA*
Ga0068869_1001786642	3300005334	Miscanthus Rhizosphere	LGLQMDSQSRAFEAPVEEHFTGTPLRCPRPMAIQPLVPWTPGRILTTLFLALVSVPGQLAPAVLSRRRA*
Ga0070666_100812902	3300005335	Switchgrass Rhizosphere	MDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA*
Ga0070682_1005321141	3300005337	Corn Rhizosphere	MDSQSRAFEAAVEEPLSGTPLRCPRPMMAQPLVPWTAGRILAAFFLALVAKPAQLAPVVINRRRA*
Ga0070682_1013848651	3300005337	Corn Rhizosphere	MDSEFRAFEAPVEATLAGTPMRCHRPMIAQPLVPWTMGRILMAFLAALISAPAQLAPAVINRRRRA*
Ga0068868_1023567712	3300005338	Miscanthus Rhizosphere	DSEFRAFEAPVEATLAGTPMRCHRPMIAQPLVPWTMGRILMAFLAALISAPAQLAPAVINRRRRA*
Ga0070668_1016667032	3300005347	Switchgrass Rhizosphere	FRRIVTFHYRDRTGLQHLGLQMDSQSRAFEAPAEEHFSGTPLRCPRPMNAQSLVPWTAGRILAAVLLGLVAIPAQLAPAVLNRRRA*
Ga0070668_1020105001	3300005347	Switchgrass Rhizosphere	MDSQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA*
Ga0070669_1004210471	3300005353	Switchgrass Rhizosphere	ATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRA*
Ga0070675_1001360111	3300005354	Miscanthus Rhizosphere	VEATLTGTPLRCPRPMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA*
Ga0070675_1014698891	3300005354	Miscanthus Rhizosphere	EVGRAFFCWVLEMDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA*
Ga0070674_1001899312	3300005356	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRRA*
Ga0070674_1002035102	3300005356	Miscanthus Rhizosphere	MDSQSRAFEAPVEEYSTGTPLRCPRPMTAQSLVPWTPSRAVAALFMTMVVRPVQLAPAMLSRRRA*
Ga0070674_1005935342	3300005356	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPQTMTAQPLVPWTMGRLLMAFLMALISVPGQLAPAVINRRRA*
Ga0070673_1002774432	3300005364	Switchgrass Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRA*
Ga0070673_1008817132	3300005364	Switchgrass Rhizosphere	FRRIVTFHYQCRMGDKLLGLKMDSQSRAFEAPVETVIAGTPLRCPRPMTAQALVPWTPGRILVAFFTTLLSVPAQLAPALNRRRA*
Ga0070710_107849511	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MDSQSRAFEAPAEEHLSGTPLPCPRHMTVQSLVPWTPGRILGSIFLAVVSAPAQLAPAVLNRRRA*
Ga0070663_1002742151	3300005455	Corn Rhizosphere	MDSQSRAFEAPVEAGHSGVPLRCPRPMITQLLVPWTPGRIVAALFLALISVPALLMPAANRRRA*
Ga0070663_1015503692	3300005455	Corn Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRLLMAFLVALISVPAQL
Ga0070678_1004077111	3300005456	Miscanthus Rhizosphere	MDSQSRAFEAPVEEYSTGTPLRCPRPMTAQSLVPWTPSRAVAALFMTMVVRPVQLAPAMQAAAVPDIAPRRW
Ga0070678_1009603321	3300005456	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRR
Ga0070678_1011155561	3300005456	Miscanthus Rhizosphere	QMDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRIILAFLVALVSVPAQLAPAVINRRRRA*
Ga0068853_1010425072	3300005539	Corn Rhizosphere	MDFQSRAFEAPVEEPSSGTPLRCPRPMIAQPLVPWTAGRIVAALVLALVAMPAQLAPVVLNRRRA*
Ga0070693_1002935191	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDFQSRAFEAPVEEPSSGTPLRCPRPMIAQPLVPWTVGRIVAALVLALVAMPAQLAPVVLNRRRA*
Ga0070693_1009378421	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	NWVLHMDSESRAFEAPVEVTLTGTPLRCPRPMIAQPLVPWTIGRILVAFLAALISAPAQLAPAVINRRRRA*
Ga0070665_1001050023	3300005548	Switchgrass Rhizosphere	MDSEFRAFEMPVEATPVATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA*
Ga0068855_1003764301	3300005563	Corn Rhizosphere	KMDSQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA*
Ga0068857_1002004972	3300005577	Corn Rhizosphere	LGSQMDSQSRAFEAPIEEHLAGTPLPCPRPMVVQSLVPWTPGRLLGALFVALVSVPAQLAPVVLNRRRA*
Ga0068862_1007234011	3300005844	Switchgrass Rhizosphere	PVEEHFTGTPLRCPRPMAIQPLVPWTPGRILTALFLALVSVPGQLAPAVLSRRRA*
Ga0097621_1000021472	3300006237	Miscanthus Rhizosphere	MDSEFRAFEAPVEATLTGTPMRCHRPMIAQPLVPWTMGRILVAFLAALISAPAQLAPAVINRRRRA*
Ga0097621_1000395802	3300006237	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRILMAGLMALISVPLQLAPAVINRRRA*
Ga0097621_1000408725	3300006237	Miscanthus Rhizosphere	MDSESRAFEAAVEASLSGTPLPCRRPMIAQPLVPWTTTRLLMAGLGALISVPAQLAPAVINRRRA*
Ga0068871_10000160810	3300006358	Miscanthus Rhizosphere	MDSESRAFEAAVEASLSGTPLPCRRPMIAQPLVPWTTTRLLMAGLGALISVPAQLAPALINRRRA*
Ga0068871_1022002342	3300006358	Miscanthus Rhizosphere	GDKLLGLKMDSQSRAFEAPVETVIAGTPMRCPRPMIAQALVPWTPGRILVAFFTTLISVPAQLAPALNRRRA*
Ga0074048_112534982	3300006581	Soil	MDSQSRVFEAPVETVIAGTPLRCPRPMTAQALVPWTPSRLLVALFTTLISVPAQLAPALNRRRA*
Ga0105240_100525071	3300009093	Corn Rhizosphere	AAVEEPLSGTPLRCPRPMMAQPLVPWTAGRILAAFFLALVAKPAQLAPVVINRRRA*
Ga0105245_113998181	3300009098	Miscanthus Rhizosphere	LSRLIAEVGWAVFLLGLQMDSESRAFEAPVEATLTGTPLRCPRPMTAQPLVPWTMGRILMAGLMALISVPLQLAPAVINRRRA*
Ga0066709_1041729541	3300009137	Grasslands Soil	EAGFAGVPLRCPQPMTAQRLVPWTPSRILAALFTALISAPALLAPAVTNRRRA*
Ga0105242_104203421	3300009176	Miscanthus Rhizosphere	LSRLITEVGRALFLLGLQMDSEFRAFEAPVEATLAGTPMRCHRPMIAQPLVPWTMGRILMAFLAALISAPAQLAPAVINRRRRA*
Ga0105242_111256922	3300009176	Miscanthus Rhizosphere	AVLSRLITEVGRALFLLGLQMDSEFRAFEAPVEATLTGTPMRCHRPMIAQPLVPWTMGRILVAFLAVLISAPAQLAPAVINRRRRA*
Ga0105248_118514542	3300009177	Switchgrass Rhizosphere	SRAFEAPVEAIRIGTPLRCPRPMTAQPLVPWTVGRILMAVLVVLISVPAQLAPAVINRRRA*
Ga0105237_105483962	3300009545	Corn Rhizosphere	MGDFLLDFTMDSEFRAFEIPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA*
Ga0105238_121210462	3300009551	Corn Rhizosphere	MGDFLLDFTMDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA*
Ga0105239_117921742	3300010375	Corn Rhizosphere	MDSQSRAFEAPAEEHFSGTPLRCPRPMMAQSLVPWTAGRILAALALALVAMPAQLAPVVLNRRRA*
Ga0134122_134193271	3300010400	Terrestrial Soil	MDSESRAFEAPVEAALSGTPLRCPRPMTAQPLVPWTMGRILMAGLMALISVPLQLAPAVINRRRA*
Ga0150983_129267152	3300011120	Forest Soil	SQSRAFEAPAEEHVSGAPLRCPRPMTIQPLVPWTPGRIVAALFLALVAIPAQLAPAVLSRRRA*
Ga0150985_1091754642	3300012212	Avena Fatua Rhizosphere	MGDKLLGLKMDSQSRVFEAPVETVIAGTPLRCPRPMIAQALVPWTPGRILVAFFTTLIAVPTQLAPAVLNRRRA*
Ga0150984_1002648521	3300012469	Avena Fatua Rhizosphere	QLLGLQMDSQSRAFEAPVEEHFTGTPLRCPRPMTVQPLVPWTPGRILTTLFLALVSVPGQLAPAVLSRRRA*
Ga0150984_1090050562	3300012469	Avena Fatua Rhizosphere	MDSQSRVFEAPVETVIAGTPLRCPRPMIAQALVPWTPGRILVAFFTTLIAVPTQLAPAVLNRRRA*
Ga0150984_1141321592	3300012469	Avena Fatua Rhizosphere	LGLHMDFQSRAFEAPVEEHVSGTPLRCPRPMAAQSLVPWTAGRALAVLIMTLVTMPAQLAPVVLNRRRA*
Ga0138256_106333012	3300012533	Active Sludge	MDVEILAFEAPVEASLTGTPLRCPRPMIAQPLVPWTVSRLVVASLAALIAVPAQLAPAVIKRRRA*
Ga0157310_100478172	3300012916	Soil	MDSEFRAFEAPVEATLAGTPLRCPRPMTAQPLVPWTMGRILMAFLVALISAPAQLAPAVINRRRA*
Ga0137419_118012692	3300012925	Vadose Zone Soil	MDSQSRAFEAPVEASFSGVPLRCPQPMIAQSLVPWTPGRIIAALFMALVSAPALLVPAAMNRRRA*
Ga0137416_111226821	3300012927	Vadose Zone Soil	KGRKTLGLQMDSQSRAFEAPVEASFSGVPLRCPQPMIAQSLVPWTPGRIIAALFMALVSAPALLVPAAMNRRRA*
Ga0137410_121238212	3300012944	Vadose Zone Soil	SFEAPVEASFAGTPLRCPRPMTAQPLVPWTMGRILMVFLMALISVPAQLAPAVINRRRA*
Ga0154020_104985782	3300012956	Active Sludge	MDSEFRAFEAPVEASLTGTPLRCPRPMIAQPLVPWTVSRLVVASLAALIAVPAQLAPAVIKRRRA*
Ga0157369_105263011	3300013105	Corn Rhizosphere	QHLGLKMDSQSRAFEAPAEEHFSGTPLRCPRPMMAQSLVPWTAGRILAALALALVAMPAQLAPVVLNRRRA*
Ga0157374_111906092	3300013296	Miscanthus Rhizosphere	MGDFLLGLTMDSESRAFEAPVEAIRIGTPLRCPRPMTAQPLVPWTVGRILMAVLVVLISGPAQLAPAVINRRRA*
Ga0157378_103386882	3300013297	Miscanthus Rhizosphere	LIAEVGWAVFLLGLQMDSESRAFEAPVEATLAGTPLRCRRPMTAQPLVPWTMGRIFMALLVALISVPLQLAPAVINRRRA*
Ga0157378_108653801	3300013297	Miscanthus Rhizosphere	MDSEFRAFEAPVEATLTGTPMRCHRPMIAQPLVPWTMGRILVAFLAVLISAPAQLAPAVINRRRRA*
Ga0163162_100497015	3300013306	Switchgrass Rhizosphere	MDSQSRAFEAPLEATLSGTPLRCPRTMAAQPLVPWTFGRLAMALFAVLISAPAQLAPALIRRRA*
Ga0163162_101395472	3300013306	Switchgrass Rhizosphere	MDSQSRAFEAPVEAGHSGVPLRCPRPMITQLLVPWTPGRIVAALVLALISVPALLMPAANRRRA*
Ga0163162_107547632	3300013306	Switchgrass Rhizosphere	SQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA*
Ga0163162_111015352	3300013306	Switchgrass Rhizosphere	MGDFLLDFTMDSEFRAFEMPVEATPIATPLRCPRQMTAQPLVPWTMGRILMAFLTALISVPTQLAPAVINRRRA*
Ga0157375_121064352	3300013308	Miscanthus Rhizosphere	MGDFLLGLTMDSESRAFEAPVEAIRTGTPLRCPRPMTAQPLVPWTVGRILMAVLMALISVPAQLAPAVINRRRA*
Ga0157375_134321061	3300013308	Miscanthus Rhizosphere	AFEAPVEEHFTGTPLRCPRPMAIQPLVPWTPGRILTTLFLALVSVPGQLAPAVLSRRRA*
Ga0157375_135485032	3300013308	Miscanthus Rhizosphere	EATLTGTPMRCHRPMIAQPLVPWTMGRILMAFLAALISAPAQLAPAVINRRRRA*
Ga0157380_101159512	3300014326	Switchgrass Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRIIVAFLVALVSVPAQLAPAVINRRRRA*
Ga0157377_110210142	3300014745	Miscanthus Rhizosphere	FLPYCHVSLPMSEGRFLLGLQMDSESRLFEAPVEASLTGTPLRCPRPMTAQPLVPWTLGRIAVACLTALILAPVQLAPAVINRRRA*
Ga0167667_10057152	3300015189	Glacier Forefield Soil	MDSESRAFEAPVEATLSGTPLRCPRSMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA*
Ga0132257_1018341062	3300015373	Arabidopsis Rhizosphere	LLKIEGLNTLGLIMDSQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA*
Ga0132255_1022268942	3300015374	Arabidopsis Rhizosphere	MGAFLLDFTMDSESRAFEAPVEATLTATPLRCHRPMITQPLVPWTVGRILMAGLVAVISVPAQLAPAVINRRRA*
Ga0193752_10121682	3300020027	Soil	MSNGQTILGLQMDSQSRAFEAPLGASLSGVPLRCPHPMITQSLVPWTPARILSALFSALVSAPALLVPAALNRRRA
Ga0193752_10189474	3300020027	Soil	VEATLTGTPLRCPRQMTAQPLVPWTMGRILMAFLVALISVPLQLAPAVINRRRA
Ga0193753_101741672	3300020034	Soil	MDSESRAFEAPVEASLSGTPLRCPRPMMAQPLVPWTMARILMAGLGALISVPAQLAPAVITRRRA
Ga0193753_103729511	3300020034	Soil	TERSLISPYCHVSLQMSDGRFFCWILQMDSESRAFEAPVEATLTGTPLRCPRQMTAQPLVPWTMGRILMAFLVALISVPLQLAPAVINRRRA
Ga0163150_101499422	3300020195	Freshwater Microbial Mat	MDSESRAFEAPVEATLTGTPLRCPRPMTVQPLVPWTTGRILMALLVALISVPAQLAPAVINRRRA
Ga0210407_111445642	3300020579	Soil	MDSQSRAFEAPAEEHVSGAPLRCPRPMTIQHLVPWTPGRIAAALFLALVAIPAQLAPAVLSRRRA
Ga0210400_100432823	3300021170	Soil	MDSQSRAFEAPAEEHVSGAPLRCPRPMTIQPLVPWTPGRIAAALFLALVAIPAQLAPAVLSRRRA
Ga0193699_101243372	3300021363	Soil	MDSESRAFEAPVEASLTGTPLRCPRSMTAQPLVPWTLGRIAVVFLTALILAPVQLAPALINRRRA
Ga0247757_102534172	3300023097	Plant Litter	MDSQSRAFEAPVEAGHSGVPLRCPRPMITQLLVPWTPGRIVAALFLALISVPALLMPAANRRRA
Ga0207642_107085051	3300025899	Miscanthus Rhizosphere	MDSEFRAFEAPVEATLAGTPMRCHRPMIAQPLVPWTMGRILMAFLAALISAPAQLAPAVINRRRRA
Ga0207680_100609112	3300025903	Switchgrass Rhizosphere	MDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA
Ga0207705_101809041	3300025909	Corn Rhizosphere	MDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALVSVPAQLAPA
Ga0207654_102491202	3300025911	Corn Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRILMAGLMALISVPLQLAPAVINRRRA
Ga0207654_102643842	3300025911	Corn Rhizosphere	MDSQSRAFEAAVEEPLSGTPLRCPRPMMAQPLVPWTAGRILAAFFLALVAKPAQLAPVVINRRRA
Ga0207695_101056791	3300025913	Corn Rhizosphere	AAVEEPLSGTPLRCPRPMMAQPLVPWTAGRILAAFFLALVAKPAQLAPVVINRRRA
Ga0207671_107672282	3300025914	Corn Rhizosphere	HYQCRMGDKLLGLKMDSQSRAFEAPVETVIAGTPLRCPRPMTAQALVPWTPGRILVAFFTTLLSVPAQLAPALNRRRA
Ga0207652_108628161	3300025921	Corn Rhizosphere	MGDFLLDFTMDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALVSVPAQLAPAVINRRRA
Ga0207681_103455202	3300025923	Switchgrass Rhizosphere	MDSEFRAFETAVEATLTGTPLRCRRPMTAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRA
Ga0207694_118512333	3300025924	Corn Rhizosphere	MGDFLLDFTMDSEFRAFEMPVEATPIATPLRCPRQMSAQPLVPWTMGRILMAFLTALISVPAQLAPAVINRRRA
Ga0207650_102292252	3300025925	Switchgrass Rhizosphere	MFLPYCHVSLPMSEGRFLLGLQMDSESRLFEAPVEASLTGTPLRCPRPMTAQPLVPWTLGRIAVACLTALILVPVQLAPAVINRRRA
Ga0207650_109239492	3300025925	Switchgrass Rhizosphere	KMDSQSRASEAPAEEHFSGTPLRCPRPMMAQSLVPWTAGRILAALVLMLVAMPAQLAPVVLNRRRA
Ga0207659_100821821	3300025926	Miscanthus Rhizosphere	VEATLTGTPLRCPRLMIAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA
Ga0207706_103050521	3300025933	Corn Rhizosphere	MDSQSRAFEAPVEEHASGTPLRCPRPMAAQPLVPWTAGRIIAALVLALVAMPAQLAPVVNRRRA
Ga0207686_101748942	3300025934	Miscanthus Rhizosphere	MDSEFRAFEAPVEATLTGTPMRCHRPMIAQPLVPWTMGRILVAFLAVLISAPAQLAPAVINRRRRA
Ga0207686_107787832	3300025934	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRA
Ga0207709_117695941	3300025935	Miscanthus Rhizosphere	MDSESRAFEAPVEATLAGTPLRCRRPMTAQPLVPWTMGRIFMALLVALISVPLQLAPAVINRRRA
Ga0207669_100509951	3300025937	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVI
Ga0207669_105395512	3300025937	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPQTMTAQPLVPWTMGRLLMAFLMALISVPGQLAPAVINRRRA
Ga0207689_100743292	3300025942	Miscanthus Rhizosphere	MGDKLLGLKMDSQSRVFEAPGETVIAGTPMRCSRPMIAQSLAPWTPGRIVVALFTTLISVPAQLAPAVSNRRRRA
Ga0207661_105705681	3300025944	Corn Rhizosphere	VTFHYQCRTGDKLLGLKMDSQSRAFEAPVETVIAGTPLRCPRPMTAQALVPWTPGRILVAFFTTLLSVPAQLAPALNRRRA
Ga0207668_107372951	3300025972	Switchgrass Rhizosphere	PAPANKKRPGIARNDPLFRRIVTFHYRDRTGLQHLGLQMDSQSRAFEAPAEEHFSGTPLRCPRPMNAQSLVPWTAGRILAAVLLGLVAIPAQLAPAVLNRRRA
Ga0207648_101729411	3300026089	Miscanthus Rhizosphere	PKSDGRIFCWILQMDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRA
Ga0207683_103907622	3300026121	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWTMGRIILAFLVALVSVPAQLAPAVINRRRRA
Ga0207683_109977752	3300026121	Miscanthus Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRSMIAQPLVPWTMGRLLMAFLVALISVPAQLAPAVINRRRRA
Ga0207698_125837241	3300026142	Corn Rhizosphere	MDSQSRAFEAPAEEHFSGTPLRCPRPMMAQSLVPWTAGRILAALALALVAMPAQLAPVVLNRRRA
Ga0209131_11781262	3300026320	Grasslands Soil	MDSQSRAFEAPVEASFSGVPLRCPQPMIAQSLVPWTPGRIIAALFMALVSAPALLVPAAMNRRRA
Ga0207853_10021812	3300026947	Tropical Forest Soil	MDSQSRAFEAPVEEHFSGTPLRCPRLMTAQLLVPWTAGRILTALVLALVAVPAQLAPVVLNRRRA
Ga0268265_106219622	3300028380	Switchgrass Rhizosphere	MDSESRAFEAPVEATLTGTPLRCPRPMIAQPLVPWPMGRILMAFLVALISVPAQLAPAVINRRRA
Ga0268265_120449772	3300028380	Switchgrass Rhizosphere	PVEEHFTGTPLRCPRPMAIQPLVPWTPGRILTALFLALVSVPGQLAPAVLSRRRA
Ga0307517_100709524	3300028786	Ectomycorrhiza	MDSESRAFEAPVEATLTGTPLRCPRQMTAQPLVPWTMGRILMVFLVALISVPLQLAPAVINRRRA
Ga0170824_1170743661	3300031231	Forest Soil	MDSESRAFEAPVEAAFAGTPLRCPRPMTAQPLVPWTMGRILMAFLVALISVPAQLAPAVINRRRA
Ga0170824_1263766591	3300031231	Forest Soil	MGDKLSGLKMDSQSRVFEAPVETVIAGTPLRCSRPMIAQSLAPWTPGRIVVALFTSLISVPAQLAP
Ga0308175_1007405011	3300031938	Soil	MDFQSRAFEAPVEEHVSGTPLRCPRPMAAQSLVPWTAGRALAVLIMTLVTMPAQLAPVVLNRRRA
Ga0307470_102984422	3300032174	Hardwood Forest Soil	MDSQSRAFEAPVEAGISGVPLRCPQPMITQLLVPWTPGRVIAALFLALVSVPAMLVPVVTNRRRA
Ga0310811_102023593	3300033475	Soil	MDSQSRAFEAPVEEPFSGTPLRCPRRMNAQPLVPWTPGRILTVFLLALVSMPAQLAPVVLNRRRA
Ga0310811_107185691	3300033475	Soil	MDSQSRAFEAPAEEHFSGTPLRCPRPMMAQPLVPWTAGRILAALVLALVAMPAQLAPVVLNRRRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences