Metagenome Family F067855

Overview

Basic Information

• Family ID: F067855
• Family Type: Metagenome
• Number of Sequences: 125
• Average Sequence Length: 54 residues
• Representative Sequence: VQRRALSLLFLTIAIALAALAAYAVLSGGRAIVIGLAAAGLALWMGDLSRKAWP
• Number of Associated Samples: 99
• Number of Associated Scaffolds: 125

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 48.39 %
• % of genes near scaffold ends (potentially truncated): 21.60 %
• % of genes from short scaffolds (< 2000 bps): 91.20 %
• Associated GOLD sequencing projects: 94
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (51.200 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (20.800 % of family members)
• Environment Ontology (ENVO): Unclassified (26.400 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (28.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 58.54%
  β-sheet: 0.00%
  Coil/Unstructured: 41.46%

Predicted 3D Structure

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.2: Ribonucleotide reductase-like	d2uw1a_	2uw1	0.88159
a.25.1.1: Ferritin	d1nfva_	1nfv	0.87491
f.55.1.1: Photosystem II antenna protein-like	d5b5ec_	5b5e	0.87437
a.25.1.0: automated matches	d3b3ha_	3b3h	0.87327
a.25.1.1: Ferritin	d1z6oa1	1z6o	0.87035

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04542	Sigma70_r2	45.60
PF04545	Sigma70_r4	12.00
PF00009	GTP_EFTU	4.80
PF07883	Cupin_2	2.40
PF04246	RseC_MucC	0.80
PF13668	Ferritin_2	0.80
PF08922	DUF1905	0.80
PF00563	EAL	0.80
PF00196	GerE	0.80
PF02494	HYR	0.80
PF02371	Transposase_20	0.80
PF11949	DUF3466	0.80
PF14492	EFG_III	0.80
PF13784	Fic_N	0.80
PF04539	Sigma70_r3	0.80
PF00589	Phage_integrase	0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	46.40
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	46.40
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	45.60
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	45.60
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.80
COG3086	RseC, positive regulator of sigma E activity	Signal transduction mechanisms [T]	0.80
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.80
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.80
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.80
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.80

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.20 %
Unclassified	root	N/A	48.80 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.20 %
Unclassified	root	N/A	48.80 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.20 %
Unclassified	root	N/A	48.80 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.40 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	4.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.40 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.60 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	4.80 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.40 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	4.80 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.40 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	4.80 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	4.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.40 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	4.80 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	4.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2088090009|LWAnN_GIDYKCY01BEKW1	Not Available	502
2124908008|FWIREl_GJ4R3DH02HVBU6	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	505
2170459020|G1P06HT02GD9J9	Not Available	502
3300000956|JGI10216J12902_103737978	Not Available	594
3300001213|JGIcombinedJ13530_103344660	Not Available	549
3300003858|Ga0031656_10124823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	917
3300003994|Ga0055435_10040297	Not Available	1092
3300004114|Ga0062593_102901295	Not Available	548
3300004155|Ga0066600_10516412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585
3300004778|Ga0062383_10072021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1418
3300005205|Ga0068999_10114452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548
3300005329|Ga0070683_100355242	All Organisms → cellular organisms → Bacteria	1395
3300005331|Ga0070670_101800923	Not Available	564
3300005333|Ga0070677_10674433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580
3300005339|Ga0070660_100543674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969
3300005355|Ga0070671_100457814	Not Available	1095
3300005459|Ga0068867_101623749	Not Available	605
3300005535|Ga0070684_101083909	Not Available	752
3300005548|Ga0070665_101483956	Not Available	687
3300005617|Ga0068859_101696437	Not Available	698
3300005833|Ga0074472_10693900	Not Available	708
3300005833|Ga0074472_11304340	Not Available	769
3300006047|Ga0075024_100618158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585
3300006237|Ga0097621_101227533	Not Available	707
3300006354|Ga0075021_10083942	Not Available	1877
3300007521|Ga0105044_11107449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595
3300009101|Ga0105247_10830300	Not Available	708
3300009167|Ga0113563_13540118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	529
3300009176|Ga0105242_10899781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885
3300009177|Ga0105248_11313458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818
3300009177|Ga0105248_11353726	Not Available	805
3300009527|Ga0114942_1313322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605
3300009840|Ga0126313_11574743	Not Available	547
3300010045|Ga0126311_11785392	Not Available	521
3300010401|Ga0134121_11003494	Not Available	820
3300012469|Ga0150984_110456181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988
3300012668|Ga0157216_10397592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610
3300012955|Ga0164298_10924022	Not Available	637
3300012960|Ga0164301_10149227	Not Available	1427
3300012985|Ga0164308_11737718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580
3300013306|Ga0163162_10471546	Not Available	1387
3300013308|Ga0157375_11320277	Not Available	848
3300014317|Ga0075343_1103722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652
3300014322|Ga0075355_1061673	Not Available	863
3300014322|Ga0075355_1263374	Not Available	501
3300015189|Ga0167667_1005677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3966
3300015189|Ga0167667_1027615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1495
3300015208|Ga0167664_1156094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632
3300015360|Ga0163144_10890555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876
3300015371|Ga0132258_10140943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5768
3300015371|Ga0132258_10311088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3879
3300015373|Ga0132257_100517742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1465
3300015373|Ga0132257_102329688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	694
3300017792|Ga0163161_11045924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699
3300017965|Ga0190266_10327665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	813
3300017965|Ga0190266_10939990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572
3300018067|Ga0184611_1189809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731
3300018074|Ga0184640_10532834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514
3300018469|Ga0190270_12345372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595
3300018476|Ga0190274_11142249	Not Available	860
3300018476|Ga0190274_11452277	Not Available	776
3300018481|Ga0190271_10114548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2520
3300019361|Ga0173482_10566146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564
3300020057|Ga0163151_10246646	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1006
3300022906|Ga0247766_1162213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583
3300023097|Ga0247757_10116026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	852
3300023264|Ga0247772_1083887	Not Available	681
3300025899|Ga0207642_10594424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688
3300025924|Ga0207694_11796793	Not Available	515
3300025925|Ga0207650_10148077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1851
3300025934|Ga0207686_10326095	Not Available	1149
3300025934|Ga0207686_10680211	Not Available	816
3300025941|Ga0207711_11615223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592
3300026121|Ga0207683_10373531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1310
3300027831|Ga0209797_10270257	Not Available	711
3300027870|Ga0209023_10269480	Not Available	1093
3300027894|Ga0209068_10037594	All Organisms → cellular organisms → Bacteria	2422
3300027894|Ga0209068_10611977	Not Available	634
3300027897|Ga0209254_10031119	All Organisms → cellular organisms → Bacteria	4789
3300027900|Ga0209253_10125403	All Organisms → cellular organisms → Bacteria	2092
3300027902|Ga0209048_10238301	Not Available	1303
3300028665|Ga0302160_10109910	Not Available	614
3300028679|Ga0302169_10027186	Not Available	1318
3300028790|Ga0307283_10233738	Not Available	536
3300028802|Ga0307503_10837369	Not Available	528
3300028865|Ga0302291_10072066	Not Available	1134
3300029984|Ga0311332_10385102	Not Available	1087
3300029989|Ga0311365_10369293	Not Available	1241
3300030003|Ga0302172_10254828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560
3300030019|Ga0311348_10980493	Not Available	629
3300030114|Ga0311333_10545447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	955
3300030943|Ga0311366_10787021	Not Available	825
3300031232|Ga0302323_100177860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2133
3300031232|Ga0302323_100543142	Not Available	1252
3300031232|Ga0302323_100968758	Not Available	943
3300031366|Ga0307506_10160168	Not Available	797
3300031366|Ga0307506_10368854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580
3300031834|Ga0315290_10021025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5055
3300031834|Ga0315290_10154674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1975
3300031834|Ga0315290_11114855	Not Available	659
3300031834|Ga0315290_11128278	Not Available	654
3300031873|Ga0315297_11110047	Not Available	651
3300031873|Ga0315297_11300027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	593
3300031997|Ga0315278_10258736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1797
3300031997|Ga0315278_10312375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1624
3300031997|Ga0315278_10391804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1434
3300031997|Ga0315278_10476039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286
3300032018|Ga0315272_10525898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	592
3300032018|Ga0315272_10652636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533
3300032143|Ga0315292_11551339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535
3300032163|Ga0315281_11600021	Not Available	635
3300032163|Ga0315281_11788662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593
3300032164|Ga0315283_11791813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	618
3300032173|Ga0315268_10587074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1105
3300032177|Ga0315276_10972623	Not Available	903
3300032205|Ga0307472_101837233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603
3300032256|Ga0315271_10163546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1755
3300032256|Ga0315271_10854891	Not Available	784
3300032256|Ga0315271_11005785	Not Available	720
3300032275|Ga0315270_10638098	Not Available	694
3300032397|Ga0315287_10083957	All Organisms → cellular organisms → Bacteria	3586
3300032397|Ga0315287_11271364	Not Available	843
3300032397|Ga0315287_12224300	Not Available	597
3300032516|Ga0315273_11130403	Not Available	992

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.60%
Host-Associated	Host-Associated	21.60%
Engineered	Engineered	0.80%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	41.60%
Terrestrial	Environmental → Terrestrial	36.00%
Plants	Host-Associated → Plants	21.60%
Solid Waste	Engineered → Solid Waste	0.80%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	32.80%
Soil	Environmental → Terrestrial → Soil	24.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.80%
Peat	Environmental → Terrestrial → Peat	9.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.00%
Sediment	Environmental → Aquatic → Sediment	6.40%
Marine	Environmental → Aquatic → Marine	2.40%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.40%
Roots	Host-Associated → Plants → Roots	0.80%
Grass	Engineered → Solid Waste → Grass	0.80%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	22.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.40%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.40%
Loam	Environmental → Terrestrial → Soil → Loam	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Ice	Environmental → Aquatic → Freshwater → Ice	0.80%
Pond	Environmental → Aquatic → Freshwater → Pond	0.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%

Subtype

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	20.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.60%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.80%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.80%

Habitat

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	20.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.20%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.60%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.20%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.40%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.60%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.60%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.60%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.80%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.80%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.80%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.80%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental
2170459020	Litter degradation NP2	Engineered
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental
3300015208	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Samples st-15,16,16 pooled, 1st-3rd transect points, snow/rock/ice interface)	Environmental
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental
3300029984	I_Fen_E1 coassembly	Environmental
3300029989	III_Fen_N1 coassembly	Environmental
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental
3300030019	II_Fen_E2 coassembly	Environmental
3300030114	I_Fen_E2 coassembly	Environmental
3300030943	III_Fen_N2 coassembly	Environmental
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_03983870	2088090009	Freshwater Sediment	RRMLSLLFLTIAVALGGLAVVRGAVGRPGDRRRGGCGGLALWMGDLARKAWP
FWIREl_08116200	2124908008	Soil	AVIAISLVGLAIYAILSGGRAIVIGLAAVGIGLWMADLSRKAWP
2NP_02296930	2170459020	Switchgrass, Maize And Mischanthus Litter	VVQRRALSILFAVIAISMGALAVYAILSVAAIVIGIAALGLGFWMADLSRKVWP
JGI10216J12902_1037379782	3300000956	Soil	VQRRALAGLFLTIALVLAALGLYSVASGGRAIVIGVAALGLALWMGDLARKAWPGRRRG*
JGIcombinedJ13530_1033446602	3300001213	Wetland	VQRRLLSLLFLSIAAVLGALAVYSVLSGGRALIIGIAAAGLAVWMGDLARKAWPKT*
Ga0031656_101248231	3300003858	Freshwater Lake Sediment	SLLFLTIAVALAALAVYSVLSGGRAIVIGLAALGLALWMGDLSRKAWP*
Ga0055435_100402973	3300003994	Natural And Restored Wetlands	VQRRALSLLFLTIAVALAALALYAVLSGGRAIVIGVAALGLALWMGDLARKAWP*
Ga0062593_1029012952	3300004114	Soil	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGFWMADLSRKAWP*
Ga0066600_105164122	3300004155	Freshwater	VQRRALSLLFLTIAVALAALAVYSVLSGGRAIVIGLAALGLALWMGDLSRKAWP*
Ga0062383_100720211	3300004778	Wetland Sediment	VQRRALSLLFLTIAVALAALAVYAMLSGGRAIVIGLAAALLALWMGDISRKAWP*
Ga0068999_101144522	3300005205	Natural And Restored Wetlands	VTECSLVRVQRRWLTLLFGLIALSLGAVAVYSALSGGRAWVVGVAAAGLALWMADLARKAWPGRRW*
Ga0070683_1003552424	3300005329	Corn Rhizosphere	VVQRRALSILFAVIAISMGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP*
Ga0070670_1018009233	3300005331	Switchgrass Rhizosphere	VVQRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKAGP*
Ga0070677_106744332	3300005333	Miscanthus Rhizosphere	VQRRALSILFAAIAISLGGLAIYAILSGGRAIVIGLAALGLGFWMADLSRKAWP*
Ga0070660_1005436743	3300005339	Corn Rhizosphere	VQRRALSILFGVIAISLGGLGIYAILSGGRAIVIGVAAIGLALWMADLSRKAWP*
Ga0070671_1004578141	3300005355	Switchgrass Rhizosphere	VQRRALSILFAVIAISLGALAIYAILSGGRAIVIGAAAAGIGLWMADLSRRAWP*
Ga0068867_1016237492	3300005459	Miscanthus Rhizosphere	VQRRALSILFAVIAISLGALAIYAILSGGRAIVIGVAAAGIGLWMADLSRRAWP*
Ga0070684_1010839092	3300005535	Corn Rhizosphere	VVQRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKAWP*
Ga0070665_1014839563	3300005548	Switchgrass Rhizosphere	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAAAGIGLWMADLARKAWP*
Ga0068859_1016964372	3300005617	Switchgrass Rhizosphere	VQRRALAGLFFAIALALAAIAVFSILAGGRAIVVGIAAIGLALWMGDLSRRAWP*
Ga0074472_106939002	3300005833	Sediment (Intertidal)	VQRRALSLLFLTIAVALAALAVYAVLSGGRAIVIGLAAASLALWMGDLSRKAWP*
Ga0074472_113043403	3300005833	Sediment (Intertidal)	VTECSLVQMQRRALTLLFSLIALSLGAIAVYSAVSGGRAWVVAVAAAGIALWMADLARKAWPR*
Ga0075024_1006181583	3300006047	Watersheds	VQRRALSLLFLTIASALGALAVYAVLSGGRAIVIGVAAGLLAIWMGDLSRKVWPRARR*
Ga0097621_1012275332	3300006237	Miscanthus Rhizosphere	GVQRRTLSILFAVIAISLGALAIYAILSGGRAIVIGAAAAGIGLWMADLSRRAWP*
Ga0075021_100839421	3300006354	Watersheds	VQRRALSLLFGTIAGALVGLAVYATISGGRAIVIGVAAAALAVWMGDLSRKAWP*
Ga0105044_111074492	3300007521	Freshwater	MLFVAIAAVLGALAAYSVLSGGRALIIGIAAAGLALWMADLARKAWPRS*
Ga0105247_108303002	3300009101	Switchgrass Rhizosphere	VQRRALSLLFSAIAIALGALAVYAVLSGGRAIVVGIAAAGLALWMADLARKVWR*
Ga0113563_135401183	3300009167	Freshwater Wetlands	VQRRALSLLFLTIAIALAVLAVYSVLSGGRAVIIGAAAGGLALWMGDLARKAWP*
Ga0105242_108997812	3300009176	Miscanthus Rhizosphere	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGVAAAGIGLWMADLSRRAWP*
Ga0105248_113134582	3300009177	Switchgrass Rhizosphere	VVQRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAAFGLGLWMADLSRKVWP*
Ga0105248_113537261	3300009177	Switchgrass Rhizosphere	RRALAGLFFAIALALAAIAVFSILAGGRAIVVGIAAIGLALWMGDLSRRAWP*
Ga0114942_13133222	3300009527	Groundwater	VQRRLLSLLFITIAAALAALAVYSIASGGRALIIGVATAGLALWMADLARKAWPKP*
Ga0126313_115747431	3300009840	Serpentine Soil	VVQRRALSILFAVIAISLAALAVYAILSGGRAIVIGIAALGLGLWMADLSRKA*
Ga0126311_117853922	3300010045	Serpentine Soil	VQRRALSILFTAIAISLGGIAIYAILSGGRAIVIGVAALGLALWMADLARKAWP*
Ga0134121_110034942	3300010401	Terrestrial Soil	VQRRALAGLFFAIALALAAIAVFSILAGGRAIVVGIAAIGLALWMGDVSRRAWP*
Ga0150984_1104561812	3300012469	Avena Fatua Rhizosphere	VQRRALGLLFSAIALALAALAVYAVLSGGRAIVIGIAAAGLALWMADLARKVWP*
Ga0157216_103975922	3300012668	Glacier Forefield Soil	LLFVTIAVALGGLAVYAALSGGRAIVIGLAAAGLSLWMADLARKTWPSS*
Ga0164298_109240221	3300012955	Soil	ILFAVIAISMGALAVYAILSGGRAIVIGVAALGLGLWMADLSRKVWP*
Ga0164301_101492273	3300012960	Soil	VVQRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP*
Ga0153916_100051567	3300012964	Freshwater Wetlands	MQRRALALLFVLIALSMGAIAVYSAASGGRAWVVALAAAGIALWMADLARKAWPR*
Ga0164308_117377182	3300012985	Soil	VQRRALSLLFSAIAIALGALAVYAVLSGGRAIVVGIAAAGLALWMGDLARKVWP*
Ga0163162_104715463	3300013306	Switchgrass Rhizosphere	VQRRALSLLFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGLWMADLSRKAWP*
Ga0157375_113202772	3300013308	Miscanthus Rhizosphere	VVQRRALSILFAVIAISMGALAVYAILSGGRAIVIGIAALGLGLWMADLSRRAWP*
Ga0075343_11037222	3300014317	Natural And Restored Wetlands	VQRRLLSALFLAIAGVLAALAVYAALSGGRAIVIGIAALGLALWMADLARRAWPGR*
Ga0075355_10616732	3300014322	Natural And Restored Wetlands	VQRRALSLLFAAIALCLGVLAAYALVSGGRAIVVGIAAAALSLWMADLARRVWPGA*
Ga0075355_12633743	3300014322	Natural And Restored Wetlands	LLSLLFLSIAAVLGALAVYSVLSGGRALIIGIAAAGLAVWMGDLARKAWPKT*
Ga0167667_10056773	3300015189	Glacier Forefield Soil	LLSLLFVAIAAVLGALAVYSMLSGGRALIIGIAAAGLALWMADLARKAWPTS*
Ga0167667_10276152	3300015189	Glacier Forefield Soil	VQRRLLSLLFVAIAVVLGALAVYSITTGGRALIIGIAAAGLALWMADLARKAWPSR*
Ga0167664_11560943	3300015208	Glacier Forefield Soil	MQRRMLSLLFLAIAVALGGLAVYAVLSGGRAIVIGAAAAGLALWMGDLARK
Ga0163144_108905552	3300015360	Freshwater Microbial Mat	LLSVLFVTIAAVLGALAVYSIASGGRALIIGIAAAGLALWMADLARKAWPRT*
Ga0132258_101409433	3300015371	Arabidopsis Rhizosphere	VQRRALALLFSLIALALAALAVFAILSGGRAIIVGVAAAGLALWMGDLARRVWP*
Ga0132258_103110883	3300015371	Arabidopsis Rhizosphere	VAVQRRALALLFSLIGLALAGLAVFAIVSGGRAIIVGVAAAGLALWMGDLARRVWP*
Ga0132257_1005177422	3300015373	Arabidopsis Rhizosphere	VQRRALSILFAVIAISLGCLAIYAILSGGRAIVIGLAALGLGVWMADLSRKAWP*
Ga0132257_1023296882	3300015373	Arabidopsis Rhizosphere	VQRRALALLFSLIGLALAGLSIFAILSGGRAIIVGVAAAGLALWMGDLARRVWP*
Ga0163161_110459242	3300017792	Switchgrass Rhizosphere	VQRRALSILFAVIAISLGALAIYAILSGGRAIVIGAAAAGIGLWMADLSRRAWP
Ga0190266_103276652	3300017965	Soil	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGLWMADLSRKAWP
Ga0190266_109399902	3300017965	Soil	VVQRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP
Ga0184611_11898092	3300018067	Groundwater Sediment	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAAAGIGLWMADLSRKAWP
Ga0184640_105328342	3300018074	Groundwater Sediment	VVQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAAAGIGLWMADLSRKAWP
Ga0190270_123453722	3300018469	Soil	VVQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGVWMADLSRKAWP
Ga0190274_111422492	3300018476	Soil	QRRALSILFAVIAISLGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP
Ga0190274_114522773	3300018476	Soil	VVQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGLWMADLSRKAWP
Ga0190271_101145482	3300018481	Soil	VQRRLLSLLFVVIAAVLGALAFYAALSGGRALIIGLAAAGLAVWMGDLARKAWPRT
Ga0173482_105661462	3300019361	Soil	VQRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGFWMADLSRKAWP
Ga0163151_102466462	3300020057	Freshwater Microbial Mat	LLSVLFVTIAAVLGALAVYSIASGGRALIIGIAAAGLALWMADLARKAWPRT
Ga0247766_11622132	3300022906	Plant Litter	FAVIAISMGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP
Ga0247757_101160262	3300023097	Plant Litter	QRRALSILFAVIAISLGGLAIYAILSGGRAIVIGLAALGLGFWMADLSRKAWP
Ga0247772_10838872	3300023264	Plant Litter	RGVQRRALSILFAVIAMSLGGLAIYAILSGGRAIAIGLAALGLALWMADLSRRAWP
Ga0207642_105944242	3300025899	Miscanthus Rhizosphere	VQRRALSILFAAIAISLGGLAIYAILSGGRAIVIGLAALGLGFWMADLSRKAWP
Ga0207694_117967931	3300025924	Corn Rhizosphere	RALAGLFFAIALALAAIAVFSILAGGRAIVVGIAAIGLALWMGDLSRRAWP
Ga0207650_101480775	3300025925	Switchgrass Rhizosphere	VVQRRALSILFAVIAISMGALAVYAILSGGRAIVIGIAALGLGLWMADLSRKVWP
Ga0207686_103260952	3300025934	Miscanthus Rhizosphere	VQRRALAGLFFAIALALAAIAVFSILAGGRAIVVGIAAIGLALWMGDLSRRAWP
Ga0207686_106802112	3300025934	Miscanthus Rhizosphere	SILFAVIAISLGALAIYAILSGGRAIVIGVAAAGIGLWMADLSRRAWP
Ga0207711_116152231	3300025941	Switchgrass Rhizosphere	RRALSSLFAVIAISLGALAIYAILSGGRAIVIGVAAAGIGLWMADLSRRAWP
Ga0207683_103735311	3300026121	Miscanthus Rhizosphere	VQRRALSLLFAVIAISLGGLGIYAILSGGRAIVIGLAALGLGLWMADLSRKAWP
Ga0209797_102702572	3300027831	Wetland Sediment	VQRRALSLLFLTIAVALAALAVYAMLSGGRAIVIGLAAALLALWMGDISRKAWP
Ga0209023_102694802	3300027870	Freshwater And Sediment	LLSVLFLTIAGVLAALAVYSVLSGGRALIIGIAAAGLAVWMGDLARKAWPRT
Ga0209068_100375943	3300027894	Watersheds	VQRRALSLLFGTIAGALVGLAVYATISGGRAIVIGVAAAALAVWMGDLSRKAWP
Ga0209068_106119772	3300027894	Watersheds	VQRRALSLLFGTIAAALVGLAVYSIASGGRAIVIGVAAAGLAIWMGDLSRKAWP
Ga0209254_100311195	3300027897	Freshwater Lake Sediment	VQRRALSLLFLTIAVALAALAVYSVLSGGRAIVIGLAALGLALWMGDLSRKAWP
Ga0209253_101254032	3300027900	Freshwater Lake Sediment	VQRRALSLLFLTIAIALAALAAYAVLSGGRAIVIGLAAAGLALWMGDLSRKAWP
Ga0209048_102383013	3300027902	Freshwater Lake Sediment	VQRRALSLLFLAIALALAALAVYAVMSGGRAIVIGLASAGLAIWMGDLGRRAWPRH
Ga0302160_101099102	3300028665	Fen	LSGLFVTIAIALGCLAVYAVMSGGRAIVIGIAAAGLALWMADLARKAWP
Ga0302169_100271862	3300028679	Fen	VQRRALSGLFVTIAIALGCLAVYAVMSGGRAIVIGIAAAGLALWMADLARKAWP
Ga0307283_102337381	3300028790	Soil	LSILFAVIAISLGGLAIYAILSGGRAIVIGLAAAGIGLWMADLSRKAWP
Ga0307503_108373692	3300028802	Soil	VQRRALSILFVTIAISLGCLAIYAILSGGRAIVIGLAAAGLGLWMADLARKAWP
Ga0302291_100720661	3300028865	Fen	LSHAPGLPHQCSLGGVQRRALSLLFLTIAVTLAALGVYALLSGGRAIVIGVAAAGLAIWMGDLARKAWP
Ga0311332_103851022	3300029984	Fen	VQRRALSLLFLTIAVTLAALGVYAVLSGGRAIVIGVAAAGLAIWMGDLARKAWP
Ga0311365_103692932	3300029989	Fen	LSHAPGLPHQCSLGGVQRRALSLLFLTIAVTLAALGVYAVLSGGRAIVIGVAAAGLAIWMGDLARKAWP
Ga0302172_102548282	3300030003	Fen	FLAIAVALAALGAYAVLSGGRAIVIGIAAVGLAIWMGDLARKAWP
Ga0311348_109804931	3300030019	Fen	FVTIAIALGCLAVHAVMSGGRAIVIGIAAAGLALWMADLARKAWP
Ga0311333_105454473	3300030114	Fen	LSHAPGLPHQCSLGGVQRRALSLLFLAIAVALAALGAYAVLSGGRAIVIGIAAVGLAIWMGDLARKAWP
Ga0311366_107870212	3300030943	Fen	ATGLPHQCSLGGVQRRALSLLFLAIAVALAALGAYAVLSGGRAIVIGIAAVGLAIWMGDLARKAWP
Ga0302323_1001778601	3300031232	Fen	QLSHAPGLPHQCSLGGVQRRALSLLFLAIAVALAALGAYAVLSGGRAIVIGIAAVGLAIWMGDLARKAWP
Ga0302323_1005431422	3300031232	Fen	LSHAPGLPHQCSLGGVQRRALSVLFLTIAVTLAALGVYAVLSGGRAIVIGVAAAGLAIWMGDLARKAWP
Ga0302323_1009687582	3300031232	Fen	MLSLLFALIAVALGGLALFAVLSGGRALVVGAASAGLALWMGDLARKAWP
Ga0307506_101601683	3300031366	Soil	VQRRALSLLFFTIAAALGGLAVYAAFSGGRAIVIGVAAACLALWMADLARRAWPS
Ga0307506_103688542	3300031366	Soil	VQRRVLSILFAVISISLGGLALYAILSGGRAIVIGVAAAGLALWMADLARKAWP
Ga0315290_100210254	3300031834	Sediment	VQRRALSLLFLTIATALAALAVYAVLSGGRAIVIGIAAAGLALWMGDLGRKAWP
Ga0315290_101546742	3300031834	Sediment	LLSLLFVSIAAVLGALAVYSIASGGRALIIGIAAAGLALWMADLARKAWPRP
Ga0315290_111148552	3300031834	Sediment	MLSLLFLAIAVALGGLAVYAVLSGGRAIVVGVAAAGLALWMGDLARKAWG
Ga0315290_111282781	3300031834	Sediment	MLSLLFLTIAVVLGGLAVYAVLSGGRAIVVGIAAAGLALWMGDLARKAWP
Ga0315297_111100472	3300031873	Sediment	VQRRALSLLFFTIAVTLAALAVYAVLSGGRAIVIGVAAALLALWMGDLSRRAWP
Ga0315297_113000271	3300031873	Sediment	MLSLLFLAIAVALGALAVFAVLSGGRAIVVGVAAAGLALWMGDLARKAWP
Ga0315278_102587362	3300031997	Sediment	MLSLLFLTIAVALGGLAVYAVLSGGRAIVVGAAAAGLALWMGDLARKAWP
Ga0315278_103123753	3300031997	Sediment	LLSLLFVSIAAVLGALAVYSIASGGRALIIGIAAAVLALWMADLARKAWPRP
Ga0315278_103918042	3300031997	Sediment	MLSLLFLTIAVALGALAVFAVLSGGRAIVVGVAAAGLALWMGDLARKAWP
Ga0315278_104760392	3300031997	Sediment	MLSLLFLTIAVALGGLAVYAVLSGGRAIVVGVAAAGLALWMGDLARKAWP
Ga0315272_105258981	3300032018	Sediment	VQRRLLSFLFLTIAAVLGALAVYSMLSGGRALIIGIAAAGLALWMGDLARKAWPKR
Ga0315272_106526362	3300032018	Sediment	MLSLLFLAIAVALGGLAIYAVRSGGRAIVVGVAAAGLALWMGDLARKAWG
Ga0315292_115513392	3300032143	Sediment	VQRRVLSLLFLTIAVALGGLAVSAVLSGGRAIVIGLAAAGLAVWMGDLARKVWP
Ga0315281_116000211	3300032163	Sediment	FLFLTIAAVLGALAVYSMLSGGRALIIGIAAAGLALWMGDLARKAWPKR
Ga0315281_117886622	3300032163	Sediment	VQRRVLSLLFGTIAVTLGALAIYAVASGGRAIVIGLAAAGLSLWMADLSRRAWP
Ga0315283_117918132	3300032164	Sediment	RVVQRRALSLLFLTIAVALAALAVYAVLSGGRAIVIGVAAALLALWMGDLSRRAWP
Ga0315268_105870741	3300032173	Sediment	VVQRRALSLLFLTIATALAALAVYAVLSGGRAIVIGIAAAGLALWMGDLGRKAWP
Ga0315276_109726232	3300032177	Sediment	VQRRALSLLFFTIAVTLAALAVYAVLSGGRAIVIGIAAAGLALWMGDLARKAWPRATRNRTP
Ga0307472_1018372332	3300032205	Hardwood Forest Soil	LLSLLFVTIAITLGGLAVYAVLSGGRAIVIGLAAAGLALWMGDLARKAWP
Ga0315271_101635462	3300032256	Sediment	LLSFLFLTIAAVLGALAVYSMLSGGRALIIGIAAAGLALWMGDLARKAWPKR
Ga0315271_108548912	3300032256	Sediment	PRVVQRRMLSLLFLTIAVALGGLAIYAVRSGGRAIVVGVAAAGLALWMGDLARKAWG
Ga0315271_110057851	3300032256	Sediment	PRVVQRRLLSLLFLTIAVVLAALAVYALLSGGRALVIAAAAAGLAVWMGDLARKAWPRR
Ga0315270_106380982	3300032275	Sediment	MLSLLFLTIAVALGGLAIYAVRSGGRAIVVGVAAAGLALWMGDLARKAWG
Ga0315287_100839572	3300032397	Sediment	VQRRALSLLFLTIAVALAALAVYAVLSGGRAIVIGLAAALLALWMGDLSRKAWP
Ga0315287_112713642	3300032397	Sediment	VQRRALSLLFFTIAVTLAALAVYAVLSGGRAIVIGIAAAGLALWMGDLARKAWPRATPNRTP
Ga0315287_122243002	3300032397	Sediment	LLSLLFLTIAGVLAALAFYSVLSGGRALIIGIAAAGLAVWMGDLARKAWPRT
Ga0315273_111304032	3300032516	Sediment	LLSLLFVSIAAVLGALAVYSIASGGRALIIGIAAAGLALWMADLGRKAWPRP