NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067786

Metagenome / Metatranscriptome Family F067786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067786
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 69 residues
Representative Sequence VSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRNQHVDAGT
Number of Associated Samples 98
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 54.40 %
% of genes near scaffold ends (potentially truncated) 29.60 %
% of genes from short scaffolds (< 2000 bps) 90.40 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(27.200 % of family members)
Environment Ontology (ENVO) Unclassified
(32.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.600 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 36.84%    β-sheet: 0.00%    Coil/Unstructured: 63.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF13180PDZ_2 30.40
PF132794HBT_2 20.00
PF00496SBP_bac_5 16.00
PF13365Trypsin_2 12.00
PF07883Cupin_2 2.40
PF00092VWA 2.40
PF10509GalKase_gal_bdg 0.80
PF13519VWA_2 0.80
PF00520Ion_trans 0.80
PF01408GFO_IDH_MocA 0.80


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.00 %
UnclassifiedrootN/A8.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004114|Ga0062593_100022025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3399Open in IMG/M
3300004156|Ga0062589_102004387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium587Open in IMG/M
3300004157|Ga0062590_100194321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1457Open in IMG/M
3300004157|Ga0062590_100436109All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300004463|Ga0063356_101259128All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300004479|Ga0062595_102529882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300004480|Ga0062592_100520904All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300004480|Ga0062592_101227097All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300005093|Ga0062594_101512428All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005294|Ga0065705_10749434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300005329|Ga0070683_100829431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria887Open in IMG/M
3300005333|Ga0070677_10403240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300005334|Ga0068869_100329054All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300005355|Ga0070671_101666868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300005356|Ga0070674_100154364All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300005440|Ga0070705_101934212All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005441|Ga0070700_101658250All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005456|Ga0070678_100283792All Organisms → cellular organisms → Bacteria1401Open in IMG/M
3300005459|Ga0068867_100549862All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300005471|Ga0070698_101238463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium696Open in IMG/M
3300005518|Ga0070699_101251597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium681Open in IMG/M
3300005564|Ga0070664_102394542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria501Open in IMG/M
3300006358|Ga0068871_101736041All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300006572|Ga0074051_11123263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria996Open in IMG/M
3300006876|Ga0079217_10320623Not Available871Open in IMG/M
3300006880|Ga0075429_101311663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium631Open in IMG/M
3300006881|Ga0068865_101831771All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006904|Ga0075424_102322485All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300009100|Ga0075418_12431928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M
3300009147|Ga0114129_11802334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium744Open in IMG/M
3300009148|Ga0105243_11612606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium676Open in IMG/M
3300009610|Ga0105340_1226310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium795Open in IMG/M
3300009789|Ga0126307_10001315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria16386Open in IMG/M
3300009789|Ga0126307_10002325All Organisms → cellular organisms → Bacteria12814Open in IMG/M
3300009789|Ga0126307_10105962All Organisms → cellular organisms → Bacteria2231Open in IMG/M
3300009789|Ga0126307_10783439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria769Open in IMG/M
3300010036|Ga0126305_10099487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1744Open in IMG/M
3300010037|Ga0126304_10371433All Organisms → cellular organisms → Bacteria → Proteobacteria953Open in IMG/M
3300010039|Ga0126309_10009882All Organisms → cellular organisms → Bacteria3881Open in IMG/M
3300010039|Ga0126309_10096938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1511Open in IMG/M
3300010042|Ga0126314_10143865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1656Open in IMG/M
3300010166|Ga0126306_10006851All Organisms → cellular organisms → Bacteria6982Open in IMG/M
3300010399|Ga0134127_13684878Not Available503Open in IMG/M
3300010403|Ga0134123_11141710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium805Open in IMG/M
3300012668|Ga0157216_10321924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria704Open in IMG/M
3300012911|Ga0157301_10092889All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300012913|Ga0157298_10261607Not Available592Open in IMG/M
3300012914|Ga0157297_10028180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1321Open in IMG/M
3300014325|Ga0163163_11669441All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300014745|Ga0157377_11049422Not Available621Open in IMG/M
3300015200|Ga0173480_10109290All Organisms → cellular organisms → Bacteria → Proteobacteria1356Open in IMG/M
3300015201|Ga0173478_10616717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria566Open in IMG/M
3300015372|Ga0132256_103358295All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300015374|Ga0132255_103931588All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300017792|Ga0163161_11806844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300017965|Ga0190266_10570668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M
3300017965|Ga0190266_10943887All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300018051|Ga0184620_10288914Not Available552Open in IMG/M
3300018052|Ga0184638_1235916Not Available635Open in IMG/M
3300018073|Ga0184624_10189010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria916Open in IMG/M
3300018078|Ga0184612_10012741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4273Open in IMG/M
3300018081|Ga0184625_10428331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria680Open in IMG/M
3300018422|Ga0190265_11246462Not Available861Open in IMG/M
3300018429|Ga0190272_10307734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1232Open in IMG/M
3300018465|Ga0190269_10678031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300018465|Ga0190269_11580811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium545Open in IMG/M
3300018466|Ga0190268_10833884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium705Open in IMG/M
3300018466|Ga0190268_11440761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria593Open in IMG/M
3300018469|Ga0190270_10002051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9663Open in IMG/M
3300018469|Ga0190270_10006241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6323Open in IMG/M
3300018469|Ga0190270_10165852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1818Open in IMG/M
3300018469|Ga0190270_11605798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium702Open in IMG/M
3300018469|Ga0190270_12604922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium568Open in IMG/M
3300018476|Ga0190274_10466053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1251Open in IMG/M
3300018481|Ga0190271_10255595All Organisms → cellular organisms → Bacteria1787Open in IMG/M
3300018481|Ga0190271_11104359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria916Open in IMG/M
3300018481|Ga0190271_11451087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium804Open in IMG/M
3300018481|Ga0190271_12979375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria568Open in IMG/M
3300019356|Ga0173481_10280771All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300020016|Ga0193696_1101386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria739Open in IMG/M
3300025901|Ga0207688_10536068Not Available735Open in IMG/M
3300025908|Ga0207643_10422310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria845Open in IMG/M
3300025925|Ga0207650_11205424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria644Open in IMG/M
3300025926|Ga0207659_10509414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1019Open in IMG/M
3300025934|Ga0207686_11272239All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300025935|Ga0207709_10194449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1444Open in IMG/M
3300025937|Ga0207669_10125640All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300025938|Ga0207704_11260999Not Available631Open in IMG/M
3300025944|Ga0207661_10952643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria791Open in IMG/M
3300025944|Ga0207661_11152633All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300026023|Ga0207677_10958425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia774Open in IMG/M
3300026075|Ga0207708_10189183All Organisms → cellular organisms → Bacteria1638Open in IMG/M
3300028379|Ga0268266_10294322All Organisms → cellular organisms → Bacteria1513Open in IMG/M
3300028587|Ga0247828_10097060All Organisms → cellular organisms → Bacteria1388Open in IMG/M
3300028587|Ga0247828_10124736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1256Open in IMG/M
3300028589|Ga0247818_11428650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300028719|Ga0307301_10230930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium603Open in IMG/M
3300028719|Ga0307301_10262081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium565Open in IMG/M
3300028744|Ga0307318_10254653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium612Open in IMG/M
3300028802|Ga0307503_10173993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium998Open in IMG/M
3300028807|Ga0307305_10441662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium586Open in IMG/M
3300028876|Ga0307286_10119701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium933Open in IMG/M
3300028889|Ga0247827_10223118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1056Open in IMG/M
3300028889|Ga0247827_11190258All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300030336|Ga0247826_10043024All Organisms → cellular organisms → Bacteria2448Open in IMG/M
3300030336|Ga0247826_10070631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2051Open in IMG/M
3300030336|Ga0247826_10213360All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300030336|Ga0247826_10407444All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300031164|Ga0307502_10082999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium640Open in IMG/M
3300031200|Ga0307496_10059441Not Available666Open in IMG/M
3300031226|Ga0307497_10328834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria710Open in IMG/M
3300031547|Ga0310887_10414463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria796Open in IMG/M
3300031548|Ga0307408_100366873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1227Open in IMG/M
3300031731|Ga0307405_11014785All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300031740|Ga0307468_101496019All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300031852|Ga0307410_11830119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium540Open in IMG/M
3300031995|Ga0307409_100062588All Organisms → cellular organisms → Bacteria2914Open in IMG/M
3300031995|Ga0307409_100621945All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300031995|Ga0307409_101148306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria799Open in IMG/M
3300032002|Ga0307416_100630741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1155Open in IMG/M
3300032002|Ga0307416_102741898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium589Open in IMG/M
3300032013|Ga0310906_10308968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1013Open in IMG/M
3300032126|Ga0307415_102195194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria540Open in IMG/M
3300033550|Ga0247829_10479010All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300033550|Ga0247829_10861163All Organisms → cellular organisms → Bacteria754Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil27.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil10.40%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil8.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere7.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.40%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062593_10002202523300004114SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRHQHVDAGT*
Ga0062589_10200438723300004156SoilRFAAFLAALALVASAFGGLVLPRFADAELPPALKAQPSLARKKLEDGRCRQQHRFEQTDLALQARA*
Ga0062590_10019432143300004157SoilGVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKAPASKPATVQQKLEDGRCPYRGLHYPGT*
Ga0062590_10043610923300004157SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPALIQQKLEDHRCRHQHVDAGT*
Ga0063356_10125912823300004463Arabidopsis Thaliana RhizospherePARYRRVVSPQRPSRRRFAAFLAALALVASAFGGVVLPRFADAELPASMKPKPSLIQQKLDDDRCRERRMGAGT*
Ga0062595_10252988223300004479SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT*
Ga0062592_10052090423300004480SoilAAARGSSPSRWPGGRPARYRRGVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCPNQHVDTGT*
Ga0062592_10122709723300004480SoilRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRHQHVDAGT*
Ga0062594_10151242823300005093SoilVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKPPATTPTTVQQKFHDGRCPHHGLHYPGT*
Ga0065705_1074943423300005294Switchgrass RhizosphereVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRNQHVDTGT*
Ga0070683_10082943123300005329Corn RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMRAKPTLIKQKVQDKRCRNEHVDAGT*
Ga0070677_1040324023300005333Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0068869_10032905423300005334Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0070671_10166686823300005355Switchgrass RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCRNEHVDAGT*
Ga0070674_10015436423300005356Miscanthus RhizosphereAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0070705_10193421223300005440Corn, Switchgrass And Miscanthus RhizosphereVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKAPVSKPATVQQKLDDGRCPHRGLHYPGT*
Ga0070700_10165825013300005441Corn, Switchgrass And Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPSLVQQKLEDHRCRNQHVDAGT*
Ga0070678_10028379233300005456Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT*
Ga0068867_10054986223300005459Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVYAGT*
Ga0070698_10123846323300005471Corn, Switchgrass And Miscanthus RhizosphereVSPQRPSGRRFAAFLASLAVAASAFGALVLPRLADGEIPGSLRAPATTPSTVQQKLQDGRCPHSGLRYPGT*
Ga0070699_10125159713300005518Corn, Switchgrass And Miscanthus RhizosphereVSPRPSGRRFAAFLAALAVAASAFGALVLPRLADGEIPGSLKAPATTPSTVQQKLQDGRCPLSGLHYPGT*
Ga0070664_10239454213300005564Corn RhizosphereVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKVKPTLIQQKLEDHRCPNQRVDTGT*
Ga0068871_10173604123300006358Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHHCRNQHVDAGT*
Ga0074051_1112326323300006572SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKLQDKRCRNEHVDAGT*
Ga0079217_1032062313300006876Agricultural SoilVSPQRPSGRRFAAFVAALGLCAAAFGALALPRLAADGVPASLKAKPAQTPIEQKLIDGRCRDRHVRDART*
Ga0075429_10131166323300006880Populus RhizosphereGRPARYRKVVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPPALKAKPSLVRQKLEDGRCRHHRVEQTDLALQARA*
Ga0068865_10183177113300006881Miscanthus RhizospherePRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0075424_10232248523300006904Populus RhizosphereRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0075418_1243192823300009100Populus RhizosphereVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPPALKAKPSLVRQKLEDGR
Ga0114129_1180233423300009147Populus RhizosphereVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPPALKAKPSLVRQKLEDGRCRHHRVEQTDLALQARA*
Ga0105243_1161260623300009148Miscanthus RhizosphereGVSPQRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHHCRNQHVDAGT*
Ga0105340_122631023300009610SoilVSPQRPSGRRFAAFLAALALAASAFGGLVLPRFADAELPGSMRAKPTLIQQKLEDHRCRNDHADAGT*
Ga0126307_10001315123300009789Serpentine SoilVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPPALKAEPSLVRQKLDDGRCRHRRAEQTDLALQARA*
Ga0126307_10002325153300009789Serpentine SoilVRPQRPSGRRFAAFLAALALVASAFGGLVIPRLADGSTPASLKSKPSLIQQKLEDERCHHRVREPRT*
Ga0126307_1010596233300009789Serpentine SoilVGPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPASMKPKPTLIQQKLHDGRCHRQHAEETELTLKARA*
Ga0126307_1078343923300009789Serpentine SoilVSPQRPSRRRFAAFLASLALVASAFGGLVLPRFADAELPPALKAKPSLVRQKLDDGRCRRQHTEETDLALKVRA*
Ga0126305_1009948733300010036Serpentine SoilVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPPALKAEPSLVRQKLEDGRCRHRRAEQTDLALQARA*
Ga0126304_1037143323300010037Serpentine SoilVGPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPASMKPKPTLIQQKLDDGRCHRQHAEETELTLKARA*
Ga0126309_1000988263300010039Serpentine SoilVSPQRPSGRRFAAFVAALALAASAFGALVMPRLADADLPASMKAKPPPTPVEEKLLDHRCPRRGLDVPGT*
Ga0126309_1009693823300010039Serpentine SoilVSPQRPSGRRFAAFLAALALVASAFGGVVLPRFADAELPPALKAKPSLIRQKLDDGRCRRQHTQETDLALQARA*
Ga0126314_1014386543300010042Serpentine SoilVGPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPASMKPKPTLTQQKLDDGRCHRQHAEETELTLKARA*
Ga0126306_1000685193300010166Serpentine SoilVRPQRPSDRRFAAFLAALALVASAFGGLVIPRLADGSTPASLKSKPSLIQQKLEDERCHHRVREPRT*
Ga0134127_1368487823300010399Terrestrial SoilVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKAPASKPATVQQKLDDGRCPHRGLHYPGT*
Ga0134123_1114171023300010403Terrestrial SoilVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKAPASKPATVQQKLEDGRCPHRGLHYPGT*
Ga0157216_1032192413300012668Glacier Forefield SoilFLVAMAVAASAFGALVLPRFADAELPASMKAKPALVKQKLEDDRCRERHLRDPGT*
Ga0157301_1009288923300012911SoilVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKVKPTLIQQKLEDHRCPNQHVDTGT*
Ga0157298_1026160723300012913SoilVSPRPSGRRFAAFLVALALAATAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRHQHVDAGT*
Ga0157297_1002818023300012914SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPALIQQKLEDHRCPNQHVDTGT*
Ga0163163_1166944113300014325Switchgrass RhizosphereRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT*
Ga0157377_1104942213300014745Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADADLPASMKAKPTLIQQKLEDHR
Ga0173480_1010929023300015200SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRNQHVDAGT*
Ga0173478_1061671713300015201SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCPNQRVDTGT*
Ga0132256_10335829513300015372Arabidopsis RhizosphereRRARYRKGVRPRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRRQHADAGT*
Ga0132255_10393158813300015374Arabidopsis RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPASMKAKPALIQQKLEDHRCRHQHVDAGT*
Ga0163161_1180684423300017792Switchgrass RhizosphereVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRNQHVDAGT
Ga0190266_1057066823300017965SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAEPPASMKAKPSLIQQKLEDHRCRNQHLDAGT
Ga0190266_1094388713300017965SoilSRRRFAAFLAALALVASAFGGLVLPRFGDAELPPALKAQPSLVRQKLEDHRCRNQHVNAG
Ga0184620_1028891413300018051Groundwater SedimentMSPQRPSGRRFAAFLAALAVAASAFGAIVLPLLADGEVPASLKVPAATPSVVQQKLEDGRCPHTGLHDPGT
Ga0184638_123591623300018052Groundwater SedimentMSPQRPSGRRFAAFLAALAVAASAFGALVLPRLADGSLPTPLREPIPTSPTVQQNLDDARCPHDRHERLGRADIPGT
Ga0184624_1018901023300018073Groundwater SedimentVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMRAKPTLIQQKLEDHRCRNDHADAGT
Ga0184612_1001274173300018078Groundwater SedimentMSPQRPSGRRFAAFLAALAVAASAFGALVLPRLADGSLPTPLRELIPTSPTVQQNLDDARCPHDRHERLGRADIPGT
Ga0184625_1042833123300018081Groundwater SedimentVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPASMKVKPTLIQQKLQDKRCRNEHVDAGT
Ga0190265_1124646223300018422SoilVQRPSGRRFAAFLAALAVAASAFGALVLPRLADGGLPPSMKAPDAPPSLTQQKLHDGLCPDRGQRYPGT
Ga0190272_1030773423300018429SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPASMKVKPSLVKQKLEDGRCRNRHVEETDLA
Ga0190269_1067803123300018465SoilVTPQRPSGRRFAAFLAALALAASACGSLVLPRFADAELPASMKAKPTLVQQKLQDGRCRHRQVEETDLALQ
Ga0190269_1158081123300018465SoilVSPQRPLGRRFAAFLAALALVASAFGGLVLPRFADAELPASLKAKPAPTPVQEKIDDDRCHFRLRDPDPGT
Ga0190268_1083388423300018466SoilVSPQRPSGRRFAAFLAALALSASAFGAVVLPRLADDSVPASLKAKPAPIQQKLADDRCRNRQADETDLALQARA
Ga0190268_1144076123300018466SoilVSPRPSGRRFAAFLAGLAVAASAFGGLVLPRFADAELPASMKVKPSLVKQKLDDGRCHNRHVEETDLALQARA
Ga0190270_10002051103300018469SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPSLIKQKLEDHRCRNQHVDAGT
Ga0190270_1000624123300018469SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADADLPASMKAKPSLIQQKLEDGRCRHQHVDAGT
Ga0190270_1016585233300018469SoilVRPQRPSGRRFAAFLAALALVASAFGGLVIPRLADGSTPASLKAKPTLIQQKLEDKRCGRERHVEETDLALEARA
Ga0190270_1160579823300018469SoilMSVQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGGLPPSMKAPDARPSLTQQKLHDGLCPERGQRYPGT
Ga0190270_1260492223300018469SoilMSPQRPSGRRFAAFLAALAVAASAFGALVLPRLADGEVPASLKPPATTPSEIQQKLEDGRCPNRGLHYQGT
Ga0190274_1046605323300018476SoilVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADADLPASMKAKPSLIQQKLEDHRCPNRHADAGT
Ga0190271_1025559513300018481SoilVSPQRPSRRRFAAFLAALGLAASAFGAVVLPRFADAEPPASMKAKPTLVQQKLEDRRCRNWHADAGT
Ga0190271_1110435923300018481SoilVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADADLPASMKAKPSLIQQKLEDGRCRNQHVDAGT
Ga0190271_1145108723300018481SoilVRPQRPSGRRLAAFLAALALVASAFGGLVIPRLADGSTPASLKAKPTLIQQKLEDKRCSRERHVEETDLALEARA
Ga0190271_1297937523300018481SoilGVSPRPSGRRFAAFLVALALAASAFGVLVLPRFADADLPASMKAKPSLIQQKLEDGRCRHQHVDAGT
Ga0173481_1028077123300019356SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT
Ga0193696_110138613300020016SoilMSPQRPSGRRFAAFLAALAVAASAFGALVLPRLADGSLPTPMQAPPTAPTVKQKLDDARCPHDRIERLGRADIPGT
Ga0207688_1053606823300025901Corn, Switchgrass And Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRHQHVDAGT
Ga0207643_1042231013300025908Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT
Ga0207650_1120542423300025925Switchgrass RhizosphereVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAELPASMKAKPTLIQQKLEDHRCRRQHVDAGT
Ga0207659_1050941423300025926Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT
Ga0207686_1127223923300025934Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCPNQHVDAGT
Ga0207709_1019444913300025935Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCRNEHVDAGT
Ga0207669_1012564013300025937Miscanthus RhizosphereAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHRCRNQHVDAGT
Ga0207704_1126099923300025938Miscanthus RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHHCRNQHVDAGT
Ga0207661_1095264313300025944Corn RhizosphereVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHHCRNQ
Ga0207661_1115263323300025944Corn RhizosphereTVRGVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMRAKPTLIKQKVQDKRCRNEHVDAGT
Ga0207677_1095842523300026023Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDK
Ga0207708_1018918323300026075Corn, Switchgrass And Miscanthus RhizosphereVSPQRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPSLVQQKLEDHRCRNQHVDAGT
Ga0268266_1029432223300028379Switchgrass RhizosphereGRPARYRSGVSPRPSGRRFAAFLVALALAASAFGALVLPRFADADPPASMKAKPTLIQQKLEDHHCRNQHVDAGT
Ga0247828_1009706023300028587SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKLEDKRCRNQHVDAGT
Ga0247828_1012473623300028587SoilVSPQRPSGRRFAAFVAALALAASAFGGLVLPRLADGDLPASLKVTPLEQTPIEQKLEDGLCPNRHDARPPT
Ga0247818_1142865023300028589SoilTVRGVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT
Ga0307301_1023093023300028719SoilMSPQRPSGRRFAAFLAALAVAATAFGALVLPRFADGEVPASLKPPVASTSVIEQKLYDGLCPHSGPHDPGT
Ga0307301_1026208113300028719SoilYLRGVSPQRPSGRRFAAFLAALSVAASAFGALVLPRLADGEIPGSLKAPATTPSMVQQKLQDGRCPHRGLHYPGT
Ga0307318_1025465313300028744SoilSPSRWRGGHRARYRRAVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPASMKAKPSLIQQKLQDHRCPNEHTEAGT
Ga0307503_1017399323300028802SoilMSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKPPATTPTTVQQKLHDGRCPHRGLHYPGT
Ga0307305_1044166213300028807SoilVSPRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPGSLKAPATTPSMVQQKLQDGRCPHRGLRYPGT
Ga0307286_1011970123300028876SoilVSPRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPASMKAKPTLIQQKLEDKRCRNDHADAGT
Ga0247827_1022311823300028889SoilVSPQRPSGRRFAAFVAALALAASAFGGLVLPRFADAELPPSMKPKPSLIQQKLEDGRCRSQHLRDAGPT
Ga0247827_1119025823300028889SoilKGVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKLEDKRCRNQHVDAGT
Ga0247826_1004302423300030336SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKLQDKRCRNEHVDAGT
Ga0247826_1007063123300030336SoilVSPQRPSGRRFAAFVAALALAASAFGGLVLPRLADGDLPASLKVPPLEQTPIEQKLEDGLCPNRHDARPPT
Ga0247826_1021336023300030336SoilVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADADLPASMKTKPSLIKEKRDDGRCRHQHVNAGT
Ga0247826_1040744423300030336SoilYRKGVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCRNQHVDAGT
Ga0307502_1008299923300031164SoilRRGVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADAELPPALKAKPTVVQQKLQDHRCPRQQLRDLET
Ga0307496_1005944113300031200SoilVSPQRPSGRRFAAFLAGLAVAASAFGALVLPRLADGEVPASLKPPATTPTTVQQKLHDGRCPHHGLHYPAT
Ga0307497_1032883423300031226SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQHQDRRCRSEHVDAGT
Ga0310887_1041446313300031547SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCRNQHVDAGT
Ga0307408_10036687343300031548RhizosphereVSPQRPSGRRFAAFVAALALCSSAFGAVVLPRLGDSSVPASLKAKPSLVQQKLDDGRCHKRYVETDLALQARA
Ga0307405_1101478523300031731RhizosphereRPSGRRFAAFLAALALVASAFGGLVIPRLADGSTPASLKAKPKPSLVQQKLDDDRCRHQHVRDPGT
Ga0307468_10149601923300031740Hardwood Forest SoilVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKLEDKRCRAEHVDAGT
Ga0307410_1183011923300031852RhizosphereALGSSRSSWLGGRPARYRRGVSPQRPSGRRFAAFLAALALVASAFGGVVLPRFADAELPPALKAKPSLVRQKLDEGRCHRQHTQETDLALQARA
Ga0307409_10006258823300031995RhizosphereVRPQRPSGRRFAAFLAALALVASAFGGLVIPRLADGSTPASLKAKPKPSLVQQKLDDDRCRHQHVRDPGT
Ga0307409_10062194523300031995RhizosphereVSPQRPSGRRFAAFLAALALVASAFGGLVLPRLADAELPASMKPKPSLIQQKLEDDRCPNRSERPPGT
Ga0307409_10114830623300031995RhizosphereVSPQRPSRRRFAAFLAALALVASAFGGLVLPRFADAELPASMKPKPTLIQQKVRDHRCTHDSRFDSVRPRRGDT
Ga0307416_10063074133300032002RhizosphereRPSGRRFAAFLAALALVASAFGGVVLPRFADAELPPALKAKPSLVRQKLDEGRCHRQHTQETDLALQARA
Ga0307416_10274189823300032002RhizosphereVSPQRPSGRRFAAFVAALALCSSAFGAVVLPRLGDSSVPASLKAKPTLVQQKLDDGRCHKRYVETDLALQARA
Ga0310906_1030896823300032013SoilVSPQRPSGRRFAAFLVALALAASAFGVLVLPRFADAQLPASMKAKPTLIQQKLEDHRCRRQHVDAGT
Ga0307415_10219519423300032126RhizosphereVSPQRPSGRWFAAFLAALAVAASAFGALVLPLLADDGVPAPLQAKPSLIQQKLDDGRCPHRGLNYPGT
Ga0247829_1047901013300033550SoilGGQEDPGRGTVRGVSPQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIQQKHQDKRCRNQHVDAGT
Ga0247829_1086116323300033550SoilQRPSGRRFAAFLVALALAASAFGGLVLPRFADAELPGSMKAKPTLIKQKVQDKRCRNEHVDAGT

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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