NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067708

Metagenome / Metatranscriptome Family F067708

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067708
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 42 residues
Representative Sequence MSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFAVFVAAV
Number of Associated Samples 99
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 14.40 %
% of genes near scaffold ends (potentially truncated) 32.80 %
% of genes from short scaffolds (< 2000 bps) 85.60 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.400 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.600 % of family members)
Environment Ontology (ENVO) Unclassified
(54.400 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.400 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 44.29%    β-sheet: 0.00%    Coil/Unstructured: 55.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF069833-dmu-9_3-mt 20.00
PF04024PspC 14.40
PF13561adh_short_C2 12.00
PF09851SHOCT 7.20
PF031712OG-FeII_Oxy 4.80
PF00034Cytochrom_C 4.00
PF00596Aldolase_II 4.00
PF08439Peptidase_M3_N 2.40
PF00497SBP_bac_3 2.40
PF00106adh_short 1.60
PF00899ThiF 1.60
PF12833HTH_18 0.80
PF08240ADH_N 0.80
PF13450NAD_binding_8 0.80
PF09995MPAB_Lcp_cat 0.80
PF05988DUF899 0.80
PF00067p450 0.80
PF09361Phasin_2 0.80
PF02885Glycos_trans_3N 0.80
PF00892EamA 0.80
PF13556HTH_30 0.80
PF02775TPP_enzyme_C 0.80
PF01925TauE 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 20.00
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 20.00
COG1164Oligoendopeptidase FAmino acid transport and metabolism [E] 2.40
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.80
COG2124Cytochrome P450Defense mechanisms [V] 0.80
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.40 %
UnclassifiedrootN/A9.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002070|JGI24750J21931_1045937All Organisms → cellular organisms → Bacteria → Proteobacteria672Open in IMG/M
3300004156|Ga0062589_101949484Not Available594Open in IMG/M
3300005093|Ga0062594_101347273All Organisms → cellular organisms → Bacteria → Proteobacteria720Open in IMG/M
3300005093|Ga0062594_101880210All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria634Open in IMG/M
3300005327|Ga0070658_11400498All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales607Open in IMG/M
3300005327|Ga0070658_11642248All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria557Open in IMG/M
3300005329|Ga0070683_100172907All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2051Open in IMG/M
3300005331|Ga0070670_100004394All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales11799Open in IMG/M
3300005331|Ga0070670_100102684All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2462Open in IMG/M
3300005331|Ga0070670_100492271All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1090Open in IMG/M
3300005335|Ga0070666_10056006All Organisms → cellular organisms → Bacteria → Proteobacteria2662Open in IMG/M
3300005345|Ga0070692_10253932All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella1054Open in IMG/M
3300005345|Ga0070692_10601166All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales728Open in IMG/M
3300005347|Ga0070668_101399161All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales638Open in IMG/M
3300005353|Ga0070669_100320321All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300005354|Ga0070675_100985290All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria774Open in IMG/M
3300005355|Ga0070671_100629413All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300005367|Ga0070667_100004997All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales11107Open in IMG/M
3300005456|Ga0070678_101413851All Organisms → cellular organisms → Bacteria → Proteobacteria650Open in IMG/M
3300005456|Ga0070678_101616583All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria609Open in IMG/M
3300005539|Ga0068853_100203203All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1803Open in IMG/M
3300005543|Ga0070672_100405576All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300005543|Ga0070672_100597725All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales961Open in IMG/M
3300005618|Ga0068864_100027930All Organisms → cellular organisms → Bacteria4768Open in IMG/M
3300005719|Ga0068861_100915212All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Advenella → Advenella kashmirensis832Open in IMG/M
3300005842|Ga0068858_102457100All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300005843|Ga0068860_101582373All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300006603|Ga0074064_11789117All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales766Open in IMG/M
3300006606|Ga0074062_12728217All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300009094|Ga0111539_12973078All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales548Open in IMG/M
3300009098|Ga0105245_10206313All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium1889Open in IMG/M
3300009098|Ga0105245_12636043All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300009137|Ga0066709_100697487All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300009177|Ga0105248_10149515All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2635Open in IMG/M
3300009553|Ga0105249_11729149Not Available698Open in IMG/M
3300010147|Ga0126319_1643872All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales735Open in IMG/M
3300010154|Ga0127503_11222084All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300010326|Ga0134065_10233287All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300010397|Ga0134124_12288541Not Available581Open in IMG/M
3300010401|Ga0134121_12577877Not Available552Open in IMG/M
3300010403|Ga0134123_10057919All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2942Open in IMG/M
3300012046|Ga0136634_10016554All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2492Open in IMG/M
3300012212|Ga0150985_104279795All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012499|Ga0157350_1021904All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria648Open in IMG/M
3300012519|Ga0157352_1052578Not Available611Open in IMG/M
3300012892|Ga0157294_10168479All Organisms → cellular organisms → Bacteria → Proteobacteria622Open in IMG/M
3300012895|Ga0157309_10246911All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300012904|Ga0157282_10077035All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium883Open in IMG/M
3300012958|Ga0164299_10612788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales746Open in IMG/M
3300012984|Ga0164309_11890765Not Available512Open in IMG/M
3300012985|Ga0164308_10728787Not Available857Open in IMG/M
3300012986|Ga0164304_10583868All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales831Open in IMG/M
3300013296|Ga0157374_10355867All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium1455Open in IMG/M
3300013297|Ga0157378_12843613All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300013308|Ga0157375_10580586All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1281Open in IMG/M
3300014166|Ga0134079_10128255All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300014326|Ga0157380_11624958All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales702Open in IMG/M
3300014969|Ga0157376_10194896All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium1860Open in IMG/M
3300014969|Ga0157376_12406989All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300015201|Ga0173478_10788662Not Available520Open in IMG/M
3300015371|Ga0132258_12588923All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1268Open in IMG/M
3300015374|Ga0132255_100908326All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1317Open in IMG/M
3300017792|Ga0163161_10719546All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales833Open in IMG/M
3300017792|Ga0163161_11239761All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300018073|Ga0184624_10286478All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium739Open in IMG/M
3300018083|Ga0184628_10038220All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2409Open in IMG/M
3300018432|Ga0190275_10258833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1683Open in IMG/M
3300018432|Ga0190275_11165531Not Available845Open in IMG/M
3300018433|Ga0066667_11001225All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300018476|Ga0190274_10077517All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2541Open in IMG/M
3300018476|Ga0190274_12177662All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales651Open in IMG/M
3300018476|Ga0190274_13161150All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300018481|Ga0190271_10280931All Organisms → cellular organisms → Bacteria → Proteobacteria1716Open in IMG/M
3300018481|Ga0190271_11025027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales949Open in IMG/M
3300018920|Ga0190273_10612580All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales825Open in IMG/M
3300018920|Ga0190273_10807103All Organisms → cellular organisms → Bacteria → Proteobacteria746Open in IMG/M
3300022897|Ga0247764_1166779All Organisms → cellular organisms → Bacteria → Proteobacteria670Open in IMG/M
3300022908|Ga0247779_1125161All Organisms → cellular organisms → Bacteria → Proteobacteria672Open in IMG/M
3300024055|Ga0247794_10081440All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae937Open in IMG/M
3300024055|Ga0247794_10131348All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales769Open in IMG/M
3300025315|Ga0207697_10054523All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella1657Open in IMG/M
3300025315|Ga0207697_10088128All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300025315|Ga0207697_10266537All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales758Open in IMG/M
3300025321|Ga0207656_10017774All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2790Open in IMG/M
3300025321|Ga0207656_10022467All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2531Open in IMG/M
3300025321|Ga0207656_10331533All Organisms → cellular organisms → Bacteria → Proteobacteria757Open in IMG/M
3300025893|Ga0207682_10115121All Organisms → cellular organisms → Bacteria → Proteobacteria1187Open in IMG/M
3300025893|Ga0207682_10421171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas632Open in IMG/M
3300025907|Ga0207645_10363304All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium970Open in IMG/M
3300025908|Ga0207643_10061891Not Available2138Open in IMG/M
3300025920|Ga0207649_10194191All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1430Open in IMG/M
3300025927|Ga0207687_11743618All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300025931|Ga0207644_10259839Not Available1388Open in IMG/M
3300025931|Ga0207644_11343848Not Available600Open in IMG/M
3300025932|Ga0207690_10431383All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella1056Open in IMG/M
3300025940|Ga0207691_10279877All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1435Open in IMG/M
3300025941|Ga0207711_11884746All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium PBB5541Open in IMG/M
3300025945|Ga0207679_10414082All Organisms → cellular organisms → Bacteria → Proteobacteria1188Open in IMG/M
3300025960|Ga0207651_10264160All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1414Open in IMG/M
3300025960|Ga0207651_11503127All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300025972|Ga0207668_10271403All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium1387Open in IMG/M
3300026035|Ga0207703_12135199All Organisms → cellular organisms → Bacteria → Proteobacteria536Open in IMG/M
3300026067|Ga0207678_10059589All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3285Open in IMG/M
3300026075|Ga0207708_10047024All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3287Open in IMG/M
3300026078|Ga0207702_10390572All Organisms → cellular organisms → Bacteria → Proteobacteria1340Open in IMG/M
3300026089|Ga0207648_11667387All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria599Open in IMG/M
3300026121|Ga0207683_11761345All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300027821|Ga0209811_10362184All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300028587|Ga0247828_11067054All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300028592|Ga0247822_10194978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1511Open in IMG/M
3300028597|Ga0247820_10472233All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300028608|Ga0247819_10871724All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300028802|Ga0307503_10132159All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1109Open in IMG/M
3300028802|Ga0307503_10350621All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales757Open in IMG/M
3300031226|Ga0307497_10146895All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales975Open in IMG/M
3300031366|Ga0307506_10023073All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1573Open in IMG/M
3300031366|Ga0307506_10114796All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales902Open in IMG/M
3300031731|Ga0307405_10424127All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1048Open in IMG/M
3300031903|Ga0307407_10745226All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → unclassified Massilia → Massilia sp. LPB0304741Open in IMG/M
3300031938|Ga0308175_103201972All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300031939|Ga0308174_10008953All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5666Open in IMG/M
3300032004|Ga0307414_11356440All Organisms → cellular organisms → Bacteria → Proteobacteria660Open in IMG/M
3300032074|Ga0308173_10082249All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2453Open in IMG/M
3300033550|Ga0247829_10364515All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1183Open in IMG/M
3300033550|Ga0247829_11741814All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales513Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere10.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.20%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere5.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere3.20%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.40%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.40%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.60%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.60%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.60%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.80%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.80%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012046Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012499Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300022897Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4EnvironmentalOpen in IMG/M
3300022908Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24750J21931_104593723300002070Corn, Switchgrass And Miscanthus RhizosphereMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGTSVWSS*
Ga0062589_10194948423300004156SoilMSPFSESAFHDRDEGPSFLSRVFLSVVLLTAGIGLAVFIAAA*
Ga0062594_10134727323300005093SoilMSPFSESAFHDRDEGPSFLSRLVLSVVLLTAGTAFAVLIAAV*
Ga0062594_10188021023300005093SoilMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFAVFIAAV*
Ga0070658_1140049823300005327Corn RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISIVLLTAGIGFAVFVAAAS*
Ga0070658_1164224823300005327Corn RhizosphereFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAVFIAAV*
Ga0070683_10017290713300005329Corn RhizosphereRACLYRRRMSEFSESALPDRDEGPSFLSRVLLSFVLLTAGIGFAVFVAAV*
Ga0070670_10000439433300005331Switchgrass RhizosphereMSPFSESAFQDRDEGPTFLSRVILSVVLLTAGIGFALLIAAA*
Ga0070670_10010268433300005331Switchgrass RhizosphereMSRFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAVFIAAV*
Ga0070670_10049227113300005331Switchgrass RhizosphereMTSFSESAFQDRDEGPSFLSRVVLSVVLLTAGIGVALLIASA*
Ga0070666_1005600633300005335Switchgrass RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAAS*
Ga0070692_1025393243300005345Corn, Switchgrass And Miscanthus RhizosphereFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVAAV*
Ga0070692_1060116613300005345Corn, Switchgrass And Miscanthus RhizosphereMSEFSESALPDRDEGPSFLSRVLLSFVLLTAGIGFAVFVAAV*
Ga0070668_10139916123300005347Switchgrass RhizosphereMSRFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAV*
Ga0070669_10032032123300005353Switchgrass RhizosphereMSRFSESAFQDRDEGPSFLSRVVLSVVLLTAGIGVALLIASA*
Ga0070675_10098529013300005354Miscanthus RhizosphereMRLYRRPMSRFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAVFIAAV*
Ga0070671_10062941323300005355Switchgrass RhizosphereMSPFSESSFHDRDEGPTFLSRVVLSVVLLTAGIGLALLVAAA*
Ga0070667_10000499763300005367Switchgrass RhizosphereMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVAAV*
Ga0070678_10141385123300005456Miscanthus RhizosphereMREFSESVLPDRDEGGPTFLSRVLLSFVLLTAGIGFAVFVAAA*
Ga0070678_10161658323300005456Miscanthus RhizosphereMSRFSESTFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAV*
Ga0068853_10020320313300005539Corn RhizosphereMREFSESVLPDRDEGGPTFLSRVLLSFVLLTAGIGFAVFVA
Ga0070672_10040557623300005543Miscanthus RhizosphereMSPFSESAFQERDEGPTFLSRVILSVVLLTAGIGFALLIAAA*
Ga0070672_10059772523300005543Miscanthus RhizosphereMRPYRRRMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGVGFAVFVAAV*
Ga0068864_10002793013300005618Switchgrass RhizosphereSESAFQDRDEGPSFLSRVVLSVVLLTAGIGVALLIAAV*
Ga0068861_10091521223300005719Switchgrass RhizosphereMSRFSESAFQDRDEGPSFLSRVLLSVVLLTAGIGFAVFIAAV*
Ga0068858_10245710023300005842Switchgrass RhizosphereYRRRMSPFSESAFQDRDEGPTFLSRVILSVVLLTAGIGFALLIAAA*
Ga0068860_10158237323300005843Switchgrass RhizosphereRRRMSPFSESSFHDRDEGPTFLSRVVLSVVLLTAGIGLALLVAAA*
Ga0074064_1178911723300006603SoilMRAYRRRMSRFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFVAAV*
Ga0074062_1272821723300006606SoilMRAYRRRMSRFSESAFHDRDEGPSFLSRVLLSGVLLTAGIGFAVFLAAV*
Ga0111539_1297307823300009094Populus RhizosphereMPPFSESAFHDRDEGPSFLSRVLISIVLLTAGIGFAVFVAAAS*
Ga0105245_1020631333300009098Miscanthus RhizosphereMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV*
Ga0105245_1263604323300009098Miscanthus RhizosphereSESAFQDRDEGPSFLSRVVLSVVLLTAGIGVALLIASA*
Ga0066709_10069748723300009137Grasslands SoilMSPFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAA*
Ga0105248_1014951523300009177Switchgrass RhizosphereMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAAS*
Ga0105249_1172914923300009553Switchgrass RhizosphereMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGTAFAVLIAAV*
Ga0126319_164387223300010147SoilMRAYRRRMSRFSESAFQDRDEGPTFLSRVLLSVVLLTAGIGFAVFVAAV*
Ga0127503_1122208423300010154SoilMSRFSESAFQDRDEGPTFLSRVLLSVVLLTAGIGFAVFVAAV*
Ga0134065_1023328723300010326Grasslands SoilMRPFSESAFHDRDEGPTFLSRVLLSFVLLTAGIGFAVFIAAA*
Ga0134124_1228854123300010397Terrestrial SoilMSSFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAAS*
Ga0134121_1257787723300010401Terrestrial SoilFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAAS*
Ga0134123_1005791953300010403Terrestrial SoilMSRFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVAAV*
Ga0136634_1001655423300012046Polar Desert SandMSQFSESAFQDNGEGPSFLSRVGIAFVLFTAGIGFALFLSAA*
Ga0150985_10427979513300012212Avena Fatua RhizosphereMSPFSESAFHDRDEGPTFLSRVLLSFVLLTAGIGFAVFIAAA*
Ga0157350_102190423300012499Unplanted SoilMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGVGFAVFVAAAS*
Ga0157352_105257823300012519Unplanted SoilMSSFSESAFHDRDEGPSFLSRVVLSLVLLTAGIGLA
Ga0157294_1016847923300012892SoilMSPFSESAFHDRDEGPSFLSRVFLSVVLLTAGIGFAVFVAAV*
Ga0157309_1024691123300012895SoilSESVLPDRDEGGPTFLSRVLLSFVLLTAGIGFAVFVAAV*
Ga0157282_1007703513300012904SoilMSPFSESAFHDRDEGPSFLSRVFLSVVLLTAGIGFALFVAAV*
Ga0164299_1061278823300012958SoilMSPFSESAFQDPDEGPTFLSRVVLSVVLLTAGIGLAVFVAAV*
Ga0164309_1189076523300012984SoilESAFQDRDEGPTFLSRVLLSVVLLTAGISFAVFVAAV*
Ga0164308_1072878723300012985SoilMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFAVFVAAV*
Ga0164304_1058386813300012986SoilFQDPDEGPTFLSRVVLSVVLLAAGIGLAVFVAAV*
Ga0157374_1035586713300013296Miscanthus RhizospherePFSESAFQERDEGPTFLSRVILSVVLLTAGIGFALLIAAA*
Ga0157378_1284361323300013297Miscanthus RhizosphereMTSFSESAFQDRDEGPSFLSRVVLSFVLLTAGIGLAVFVAAV*
Ga0157375_1058058623300013308Miscanthus RhizosphereMSPFSESAFQDRDEGPSFLSRVFLSVVLLTAGIGFALFVAAV*
Ga0134079_1012825513300014166Grasslands SoilPFSESAFHDRDEGPTFLSRVLLSFVLLTAGIGFAVFIAAA*
Ga0157380_1162495823300014326Switchgrass RhizosphereMSPFSESAFQDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAV*
Ga0157376_1019489633300014969Miscanthus RhizosphereFHDRDEGPSFLSRLVLSVVLLTAGTAFAVLIAAV*
Ga0157376_1240698913300014969Miscanthus RhizosphereMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAA
Ga0173478_1078866213300015201SoilMSRFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFALFVAA
Ga0132258_1258892333300015371Arabidopsis RhizosphereMSSFSESAFHDRDEGPSFLSRVVLSLVLLTAGIGLAVFVAAV*
Ga0132255_10090832623300015374Arabidopsis RhizosphereMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFEAAV*
Ga0163161_1071954613300017792Switchgrass RhizosphereMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0163161_1123976123300017792Switchgrass RhizosphereMSPFSESSFHDRDEGPTFLSRVVLSVVLLTAGIGLALLVAAA
Ga0184624_1028647813300018073Groundwater SedimentESAFHDHDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0184628_1003822033300018083Groundwater SedimentMRPYRRRMSPFSESAFHDRDEGPTFLSRVVLSVVLLTAGIGLALLIAAA
Ga0190275_1025883333300018432SoilMSQSPESAFQHASEGPSFLSRLGIAVVLLTAGIGVALALASA
Ga0190275_1116553123300018432SoilMRPFSESAFQNAGEGPSFLSRLGIAVVLWTAGMGVALALAAA
Ga0066667_1100122513300018433Grasslands SoilMSPFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAA
Ga0190274_1007751733300018476SoilMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALLVAAV
Ga0190274_1217766213300018476SoilMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGVSLAVFVSAV
Ga0190274_1316115023300018476SoilMRPYRRRMSPFSESALQDRDEGPTFLSRVVLSVVLLTAGTAFAVLIAAV
Ga0190271_1028093133300018481SoilMRPYRRRMSRFSESTFHDHDEGPSFLSRVVLSVVLLTAGTAFAVLIAAV
Ga0190271_1102502713300018481SoilMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFAVFIAAV
Ga0190273_1061258023300018920SoilMSPFSESAFQDRDEGPTFLSRVVLSVVLLTAGIGFAVLIAAV
Ga0190273_1080710313300018920SoilMSQFSESTFPDHRAEGPSFLSRVAIAFVVLTAGISLAVLVAAA
Ga0247764_116677923300022897Plant LitterARLYRRHMSPFSESAFHDRDEGPSFLSRLVLSVVLLTAGTAFAVLIAAV
Ga0247779_112516113300022908Plant LitterPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0247794_1008144023300024055SoilMSEFSESALPDRDEGPSFLSRVLLSFVLLTAGIGFAVFVAAV
Ga0247794_1013134823300024055SoilMSPFSESAFHDRDEGPSFLSRLVLSVVLLTAGTAFAVLIAAV
Ga0207697_1005452343300025315Corn, Switchgrass And Miscanthus RhizosphereMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVAAV
Ga0207697_1008812823300025315Corn, Switchgrass And Miscanthus RhizosphereMSRFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAV
Ga0207697_1026653723300025315Corn, Switchgrass And Miscanthus RhizosphereMSPFSESAFHDRDEGPSFLSRLVLSVVLLTAGTAF
Ga0207656_1001777433300025321Corn RhizosphereMSPFSESAFQERDEGPTFLSRVILSVVLLTAGIGFALLIAAA
Ga0207656_1002246733300025321Corn RhizosphereMSRFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAVFIAAV
Ga0207656_1033153323300025321Corn RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGIGFAVFVAAAS
Ga0207682_1011512123300025893Miscanthus RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISIVLLTAGIGFAVFVAAAS
Ga0207682_1042117133300025893Miscanthus RhizosphereSPFSESAFQERDEGPTFLSRVILSVVLLTAGIGFALLIAAA
Ga0207645_1036330413300025907Miscanthus RhizosphereSAFHDRDEGPTFLSRVILSVVLLTAGIGFALLIAAA
Ga0207643_1006189113300025908Miscanthus RhizosphereMSPFSESAFQDRDEGPTFLSRVILSVVLLTAGIGFALLIAAA
Ga0207649_1019419133300025920Corn RhizosphereMREFSESVLPDRDEGGPTFLSRVLLSFVLLTAGIGFAVFVAAA
Ga0207687_1174361813300025927Miscanthus RhizosphereESAFQDRDEGPSFLSRVVLSVVLLTAGIGVALLIASA
Ga0207644_1025983913300025931Switchgrass RhizosphereMSPFSESAFQDRDEGPTFLSRVILSVVLLTAVIGFALLIAAA
Ga0207644_1134384823300025931Switchgrass RhizosphereMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVA
Ga0207690_1043138323300025932Corn RhizosphereMSRFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLAVFVAAV
Ga0207691_1027987723300025940Miscanthus RhizosphereMRPYRRRMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGVGFAVFVAAV
Ga0207711_1188474623300025941Switchgrass RhizosphereMSSFSESAFHDRDEGPSFLSRVVLSLVLLTAGIGLAVFVAAV
Ga0207679_1041408223300025945Corn RhizosphereMSEFSESALPDHDEGPTFLSRVLLSFVLLTAGVGFAVFVAAV
Ga0207651_1026416033300025960Switchgrass RhizosphereMSRFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAV
Ga0207651_1150312723300025960Switchgrass RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISFVLLTAGI
Ga0207668_1027140313300025972Switchgrass RhizosphereSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0207703_1213519913300026035Switchgrass RhizosphereGGPRPYRRRMSPFSESAFQDRDEGPTFLSRVILSVVLLTAGIGFALLIAAA
Ga0207678_1005958913300026067Corn RhizosphereFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0207708_1004702413300026075Corn, Switchgrass And Miscanthus RhizosphereSRFSESAFHDRDEGPSFLSRLLLSVALLTAGVGFAVFIAAV
Ga0207702_1039057223300026078Corn RhizosphereMNPFSESAFQARAEGPSFLARVGIAFVVLTAGIGVALLMAAA
Ga0207648_1166738713300026089Miscanthus RhizosphereMSRFSESAFHDRDEGPTFLSRVLLSVVLLTAGIGFAVFIAAL
Ga0207683_1176134523300026121Miscanthus RhizosphereMRPYRRRMPPFSESAFHDRDEGPSFLSRVLISFVL
Ga0209811_1036218423300027821Surface SoilHMSRFSESAFQDRDEGPTFLSRVLLSVVLLTAGIGFAVFVAAV
Ga0247828_1106705413300028587SoilMSQFPESAFHDRDEGPSFLSRVAITFVLLTAGIGLAVLVAAAQ
Ga0247822_1019497833300028592SoilMRPYRRRMSPFSESAFHDRDEGPSFLSRVFLSVVLLTAGIGLAVFIAAA
Ga0247820_1047223313300028597SoilMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAA
Ga0247819_1087172423300028608SoilYRRHMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFALFVAAV
Ga0307503_1013215923300028802SoilMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGTAFAVLIAAV
Ga0307503_1035062113300028802SoilRLYRRRMSPFSESAFHDRDEGPSFLSRVVLSVVLLTAGIGLALFMAAA
Ga0307497_1014689523300031226SoilMRAYRRRMSRFSESAFHDPDEGPTFLSRVLLSVVLLTAGISFAVFVAAV
Ga0307506_1002307323300031366SoilMRRYRRRMSPFSESAFHDRDEGPSFLSRVLLSVVLLTAGIGFAVFVAAV
Ga0307506_1011479623300031366SoilMSPFSESSFHDRDEGPTFLSRVVLSVVLLTAGIGLALFMAAA
Ga0307405_1042412723300031731RhizosphereMSPFSESAYQDAGEGPSFLSRLGIAIVLLSAGIGVALALASAA
Ga0307407_1074522613300031903RhizospherePFSESAFQDAGEGPSFLSRLGIAVVLLTAGIGVALALAAAA
Ga0308175_10320197223300031938SoilMSEFSESALPDRDEGPSFLSRVLLSFVLLTAGIGFAVFVAAE
Ga0308174_1000895333300031939SoilMPPFSESAFHDRDEGPTFLSRVLLSFVLLTAGIGFAVFIAAA
Ga0307414_1135644023300032004RhizosphereMSPFSESAFQDAGEGPSFLSRLGIAVVLLTAGIGVALALAAAA
Ga0308173_1008224933300032074SoilMSPFSESAFHDGDEGPTFLSRVILSVVLLTAGIGFAVFIAAA
Ga0247829_1036451513300033550SoilMRPYRRRMSPFSESAFHDRDEGPSFLSRVFLSVVLLTAGIGLAV
Ga0247829_1174181423300033550SoilMSRFSESAFQDRDEGPSFLSRVLLSVVLLTAGIGFAVFIAAV

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Bioinformatics & Integrated Biology Lab
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