Basic Information | |
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Family ID | F067654 |
Family Type | Metagenome |
Number of Sequences | 125 |
Average Sequence Length | 50 residues |
Representative Sequence | MSAAPSMAREETPRRVFPRHPINVPLDLIALRSGVPENLPGRCTDLSE |
Number of Associated Samples | 112 |
Number of Associated Scaffolds | 125 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 96.80 % |
% of genes from short scaffolds (< 2000 bps) | 93.60 % |
Associated GOLD sequencing projects | 103 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.23 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (82.400 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.400 % of family members) |
Environment Ontology (ENVO) | Unclassified (38.400 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.200 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.53% β-sheet: 0.00% Coil/Unstructured: 89.47% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.23 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 125 Family Scaffolds |
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PF00476 | DNA_pol_A | 84.80 |
PF02146 | SIR2 | 7.20 |
PF02739 | 5_3_exonuc_N | 2.40 |
PF01613 | Flavin_Reduct | 1.60 |
PF01367 | 5_3_exonuc | 0.80 |
COG ID | Name | Functional Category | % Frequency in 125 Family Scaffolds |
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COG0749 | DNA polymerase I, 3'-5' exonuclease and polymerase domains | Replication, recombination and repair [L] | 84.80 |
COG0846 | NAD-dependent protein deacetylase, SIR2 family | Posttranslational modification, protein turnover, chaperones [O] | 7.20 |
COG0258 | 5'-3' exonuclease Xni/ExoIX (flap endonuclease) | Replication, recombination and repair [L] | 3.20 |
COG1853 | FMN reductase RutF, DIM6/NTAB family | Energy production and conversion [C] | 1.60 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 82.40 % |
All Organisms | root | All Organisms | 17.60 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 14.40% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 11.20% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 7.20% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.20% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 6.40% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 5.60% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 4.80% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 4.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.00% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 4.00% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 4.00% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 4.00% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 3.20% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 2.40% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.60% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 1.60% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.60% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.60% |
Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 1.60% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 0.80% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.80% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.80% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.80% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 0.80% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 0.80% |
Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.80% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.80% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.80% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.80% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2140918008 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all | Environmental | Open in IMG/M |
3300000567 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 | Environmental | Open in IMG/M |
3300001154 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300004080 | Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004635 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3 | Environmental | Open in IMG/M |
3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
3300005952 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 | Environmental | Open in IMG/M |
3300005995 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006059 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012 | Environmental | Open in IMG/M |
3300006086 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 | Environmental | Open in IMG/M |
3300006642 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D | Environmental | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
3300009029 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189 | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009629 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 | Environmental | Open in IMG/M |
3300009632 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 | Environmental | Open in IMG/M |
3300009634 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 | Environmental | Open in IMG/M |
3300009637 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 | Environmental | Open in IMG/M |
3300009640 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 | Environmental | Open in IMG/M |
3300009646 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 | Environmental | Open in IMG/M |
3300009698 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG | Environmental | Open in IMG/M |
3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
3300009762 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40 | Environmental | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300014159 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG | Environmental | Open in IMG/M |
3300014164 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG | Environmental | Open in IMG/M |
3300014165 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG | Environmental | Open in IMG/M |
3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300017822 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2 | Environmental | Open in IMG/M |
3300017931 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100 | Environmental | Open in IMG/M |
3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
3300017934 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3 | Environmental | Open in IMG/M |
3300017935 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40 | Environmental | Open in IMG/M |
3300017946 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 | Environmental | Open in IMG/M |
3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017996 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 | Environmental | Open in IMG/M |
3300018002 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40 | Environmental | Open in IMG/M |
3300018009 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40 | Environmental | Open in IMG/M |
3300018014 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40 | Environmental | Open in IMG/M |
3300018015 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150 | Environmental | Open in IMG/M |
3300018016 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40 | Environmental | Open in IMG/M |
3300018026 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100 | Environmental | Open in IMG/M |
3300018030 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100 | Environmental | Open in IMG/M |
3300018033 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10 | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018037 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300018090 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300020199 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300022521 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24 | Environmental | Open in IMG/M |
3300025444 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes) | Environmental | Open in IMG/M |
3300025453 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes) | Environmental | Open in IMG/M |
3300025460 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes) | Environmental | Open in IMG/M |
3300025472 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes) | Environmental | Open in IMG/M |
3300025501 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes) | Environmental | Open in IMG/M |
3300025576 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes) | Environmental | Open in IMG/M |
3300025612 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes) | Environmental | Open in IMG/M |
3300025878 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes) | Environmental | Open in IMG/M |
3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
3300027439 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027587 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027667 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027676 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027692 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027737 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes) | Environmental | Open in IMG/M |
3300027854 | Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes) | Environmental | Open in IMG/M |
3300027855 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes) | Environmental | Open in IMG/M |
3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027898 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028646 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2 | Environmental | Open in IMG/M |
3300028775 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2 | Environmental | Open in IMG/M |
3300028780 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2 | Environmental | Open in IMG/M |
3300028785 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2 | Environmental | Open in IMG/M |
3300028788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2 | Environmental | Open in IMG/M |
3300028806 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1 | Environmental | Open in IMG/M |
3300029907 | I_Bog_N1 coassembly | Environmental | Open in IMG/M |
3300029939 | I_Bog_E3 coassembly | Environmental | Open in IMG/M |
3300029995 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2 | Environmental | Open in IMG/M |
3300030000 | I_Fen_N3 coassembly | Environmental | Open in IMG/M |
3300030011 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3 | Environmental | Open in IMG/M |
3300030045 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3 | Environmental | Open in IMG/M |
3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Bog_all_C_00864190 | 2140918008 | Soil | MSAAKALAFEDRPRRVFFRHPINVPLDLIALRSGVPENLPGRCTDISESGVGAVVA |
JGI12270J11330_102164182 | 3300000567 | Peatlands Soil | MSAAPSLEFEKEPRRVSPRHPINVPLDVIALRSGVPENLPGRCTDISEAG |
JGI12636J13339_10391852 | 3300001154 | Forest Soil | MSAARSPVLEETRERGFARHPINVPLDLIALRSGVPENLP |
JGI12635J15846_106960993 | 3300001593 | Forest Soil | MSAARSPVLEETRERGFARHPINVPLDLIALRSGV |
Ga0062385_101477301 | 3300004080 | Bog Forest Soil | MSAAPSMALDVTSRRAFPRHPINVALDVIALRSGVPETLPGRCTDISEAGVGAVVAGEMA |
Ga0062385_107306801 | 3300004080 | Bog Forest Soil | MSAAPSMAFEASPHRVFPRHPINVPLDLIALRCGVPEDLPGRCTDISEAG |
Ga0062384_1001360692 | 3300004082 | Bog Forest Soil | MSAAASLAFEKTPRRVCSRYPIDVPLDLIALRSGVPENLPGRCT |
Ga0062387_1004795251 | 3300004091 | Bog Forest Soil | MSAAPSMALDEAPRRAFPRHPINVPLDLIALRSGVPENLPGRCTDISEA |
Ga0062389_1013736751 | 3300004092 | Bog Forest Soil | MSAATAMALEKAPQRVASRKPINVPLDLIALRSGVPENLPGRCIDLSEGGVGAVVA |
Ga0062389_1045639842 | 3300004092 | Bog Forest Soil | MSAATAPALEKTQKRNSPRHAINVPVDLIALRFGVPENLPGRCTDI |
Ga0062388_1012025902 | 3300004635 | Bog Forest Soil | MSAATALAFEKSPRRVSRHPVNIPLDLIALRSGVPENLPGRCTDLSE |
Ga0066692_100273391 | 3300005555 | Soil | MSAARSPVLEETRERGFNRHPINVPLDLIALRSGVPDNLP |
Ga0080026_101514291 | 3300005952 | Permafrost Soil | MSAALSPVLDERPQRVFPRHPINVPVDLIALRSGVPENLPGSCTDIS |
Ga0066790_104930892 | 3300005995 | Soil | MSAATGLALEKAPRRSFPRQSINVPLDLIALRSGVPENLPGRCTDISEAGVGAV |
Ga0075029_1012481541 | 3300006052 | Watersheds | MSAASSMAFEGAERRVFSRQPINVPLDLIALRSGVPESLPGRCTDLSEAGLGAVVA |
Ga0075017_1004127502 | 3300006059 | Watersheds | MSAAPSHALETAQRRAVSRQPVQVPLDVVALRSGVPENFPGRCTDLSETGVGAIIAGELVPDQHV |
Ga0075017_1005019281 | 3300006059 | Watersheds | MSAAPLLVLEVERRASSRQPVHVPLDVVALQSGLPATLPGRCTDLSETGVGAILAGELV |
Ga0075017_1006087142 | 3300006059 | Watersheds | MSAATAPAFEDTPRRNFPRQPIIVPVDLIALRSGVPENLPGRCTDISEVGVGA |
Ga0075019_104198071 | 3300006086 | Watersheds | MSAAPLPAFEETPQRRFPRRPINVPLDLIALRSGIPETLPGRCTDISETG |
Ga0075019_110930792 | 3300006086 | Watersheds | VSAGTSLALEKTPRRGFPRFPVKVPLDVIALRSGIPQNLPGRCTDLSEG |
Ga0075521_100079523 | 3300006642 | Arctic Peat Soil | MSAAPAPAFEKTPRRVSLRHPINIPLDLIALRSGVPENLPGRCTDISE |
Ga0066659_109409482 | 3300006797 | Soil | MSAARSPVLEETRERGLPRHPINVPLDLIALRFGVPENLPGRCTDISEAGVGAVVAGELAAGL |
Ga0073928_105271311 | 3300006893 | Iron-Sulfur Acid Spring | MSAARSPVLEETRERVFPRHPINVTLDLIALRSGVPENLPGRCTDISEAGVGAVVAG |
Ga0073928_109568521 | 3300006893 | Iron-Sulfur Acid Spring | MSAVPSPIYEETLRRGLPRHAISVPLDLIALRSGVPENLPGRCTDISEAGLGA |
Ga0066793_103324801 | 3300009029 | Prmafrost Soil | MSAAPSPAFEEVQRRVPPRYPINVPLDLIALRSGVPENLPG |
Ga0066793_107525581 | 3300009029 | Prmafrost Soil | MSAVPSPAFEEAQRRVPPRHPINVPLDLIALRSGVPENLPGRCLDLSEAGVG |
Ga0099828_114038492 | 3300009089 | Vadose Zone Soil | MSAGPSAAFEKTQRRVLPRQPITVPLDVIALRCGIPENLPGRCTDLSEAGVGAVVAGEL |
Ga0099792_107586522 | 3300009143 | Vadose Zone Soil | MSAARSPVLEATRERVFPRHPINVPLDLIVLRSGVPDNL |
Ga0116119_10472852 | 3300009629 | Peatland | MSAAPSPAFEEASRRVFPRHPINVPLDVIALRSGDPENLPGRCTDLSE |
Ga0116102_10786661 | 3300009632 | Peatland | MSAAPSMAFEETPRRAFPRYPIKVPLDLIALRSGLPENLPGRCTDI |
Ga0116124_11923051 | 3300009634 | Peatland | MSAAPAPAFEETLQRVFPRHPINVPLDLIALRSGLPENLPGRCTDISEAGVGAVVAGELV |
Ga0116118_11790982 | 3300009637 | Peatland | MSAAPSPAFEEASRRVFPRHPINVPLDVIALRSGDPENLPGRCTDLSEAGV |
Ga0116126_11054761 | 3300009640 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPGRCTDISETGAGAVVA |
Ga0116132_12847461 | 3300009646 | Peatland | MALEKTPRRVFPRYPINVPLDLIALRSGVPENLPGRCTDLSEAGVGAVVA |
Ga0116216_104486792 | 3300009698 | Peatlands Soil | MSAAPSMAREETPRRVFPRYPINIPLDLIALRSGVPENLPGRCTDLSEAGVGAVVAGELA |
Ga0116217_104949182 | 3300009700 | Peatlands Soil | MSAATAPALEKTQPRNFPRQPVNVPVDLMAFRSGVSENLPGRCTDISEVGVGAVV |
Ga0116217_105581101 | 3300009700 | Peatlands Soil | MSAARSLALEETQRRAFARHPVHVPLDVIALRCGVPENLPGRCTDLSESGV |
Ga0116130_12920263 | 3300009762 | Peatland | MSAVPTPVFDETPQRISPRHPINVPLDLIALRSGVPENLPGRCTDISEAGVGAVVAGEL |
Ga0074044_104927632 | 3300010343 | Bog Forest Soil | MSAASAPAFEKRPRRAFPRSPINVPLDLIALRSGVPEDLPGRCTDISEGGVGAVLA |
Ga0136449_1000555186 | 3300010379 | Peatlands Soil | MSVAPLPVFDETRQRVSPRHPISVPVDLIALRSGVPENLPGRCTDLSEAGVGAVVAGELATG* |
Ga0137382_105491712 | 3300012200 | Vadose Zone Soil | MSAARSPVLEETRERGFDRHPINVPLDLIALRSGVP |
Ga0137376_111285202 | 3300012208 | Vadose Zone Soil | MSAARSPVLEETRERGLPRHPINVPLDLIALRFGVPENL |
Ga0137361_110915032 | 3300012362 | Vadose Zone Soil | MSAARSPVLEATRERVFSRHPINVPLDLIALRSGVPDNLPGRCTDISEAGVGAVVA |
Ga0137358_103309241 | 3300012582 | Vadose Zone Soil | MSAARSPVLEATRERVFSRHPINVPLDLIALRSGVPDNLPGRCTDISEAGVGAVV |
Ga0137395_111709092 | 3300012917 | Vadose Zone Soil | MSAARAPALEETRERVFPRHPINVTLDLIALRSGVPD |
Ga0181530_102623002 | 3300014159 | Bog | MAFEETPRRAFPRYPIKVPLDLIALRSGLPENLPGRCTDISEAGVGAVVAGEL |
Ga0181532_101200971 | 3300014164 | Bog | MSAAPKPVFDSTPQRIFPRHPINAPLDLIALRSGIPEIFPGRCTDLSEAGVG |
Ga0181523_105454262 | 3300014165 | Bog | MSAAPSPVLEESPRRGFARFPVNVALDVIALRSGVPDNLPGRCTDLSEGGVG |
Ga0182021_130502561 | 3300014502 | Fen | MSAVPSPVFGEAPQRLSPRRPLNVPLDLIALRSGIPETLPGRCTDLSEAGVGV |
Ga0187802_100972311 | 3300017822 | Freshwater Sediment | MSAAPSLALEKAPRRGSPRYPVNVALDVIVLRSGVPENLP |
Ga0187877_11495101 | 3300017931 | Peatland | MSAATSMALEKTPRRVFPRYPINVPLDLIALRSGVPENLPGRCTDLSEAGVGAVVAGELA |
Ga0187801_104961702 | 3300017933 | Freshwater Sediment | MTAAPSLALEKAERRFSPRCPIHVPLDVIALRSGVPEYLPGRCTDLSESGVGAMVAGELSAGQ |
Ga0187803_101824772 | 3300017934 | Freshwater Sediment | VSAAPALTPALPAPRRSFPRHPISVPVDVIVLRSGIPESLPGRCTDLSETGVGAIVAGE |
Ga0187803_103526222 | 3300017934 | Freshwater Sediment | MSAAPSLALEKTQRRAYPRRPVHVPLDVIALRSGVPENLPG |
Ga0187848_101224021 | 3300017935 | Peatland | MSAAPSPVLEESPRRGFARFPVNVALDVIALRSGVPDNLPGRCTDL |
Ga0187879_101980821 | 3300017946 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPGR |
Ga0187817_105729741 | 3300017955 | Freshwater Sediment | MSAATALALETTPQRNFPRYPISVRVDLIALRSGVPENLPGRCTDI |
Ga0187817_108127111 | 3300017955 | Freshwater Sediment | MSAVSAPALGKTPRRNFPRHLLNVPVDLIALRSGVPETLPGRCTDISEAGVGAVVAGE |
Ga0187779_102164881 | 3300017959 | Tropical Peatland | MSAGTSLALEKAPRRAFPRHPAKVPLDVIALRSGVPQSLPGRCVDLSEGGLG |
Ga0187781_101883461 | 3300017972 | Tropical Peatland | MSTATLMGLETKASRRAFSRHPIDVRLDLIALRSGVPDNLPGRCTDLSEGGMGAVVAGELTAGQMVAIE |
Ga0187891_11071771 | 3300017996 | Peatland | MSAAPSMALEKAQRRAFSRYPISVPLDLIALRSGVPENLPGRCTDISESGVGLVVAGELG |
Ga0187868_13026521 | 3300018002 | Peatland | MSAVPTPVFDETPQRICPRHPINVPLDLIALRSGVPENLPGRCTDISEAGVGA |
Ga0187884_104555521 | 3300018009 | Peatland | MSAAPSPAFEEASRRVFPRHPINVPLDVIALRSGVPENLPGRCT |
Ga0187860_13854982 | 3300018014 | Peatland | MSAAPLPLFDETPQRVSPRHPINVPLDLIALRSGIPENLPGRCIDLSEAGVGAVVSGELG |
Ga0187866_11843842 | 3300018015 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPGRCTDISE |
Ga0187880_12860692 | 3300018016 | Peatland | MSAAPAQAFEKRPRRFSPRQPISVPVDLIGLRSGVPENLPGRCTDISEAGVGAVVAGEM |
Ga0187857_101279611 | 3300018026 | Peatland | MSALPTPLFEETTQRGFPRHPISVSLDLIALRSGVPENLPGRCTDLSEGGVG |
Ga0187857_102223802 | 3300018026 | Peatland | MSAAPLPLFDETPQRVSPRHPINVPLDLIALRSGIPENLPGRCID |
Ga0187869_102189602 | 3300018030 | Peatland | MSAAPSLVFDETTQRVFPRHPINVPLDLIVLQSGVPENLPGRCTDLSEAGVGAVVAGELP |
Ga0187869_102484662 | 3300018030 | Peatland | MSAAPSMAREETPRRVFPRHPINVPLDLIALRSGVPENLPGRCTDLSE |
Ga0187867_102000121 | 3300018033 | Peatland | MSAAPAQAFEKRPRRFSPRQPISVPVDLIGLRSGVPENLPGRCTDISEAGVGAVVAGEMAAGQQ |
Ga0187867_104275801 | 3300018033 | Peatland | MSAAPSMAFEETPRRAFPRYPIKVPLDLIALRSGLPENLPGRCTDISEA |
Ga0187863_101689871 | 3300018034 | Peatland | MSAAPSMAFEREPRRVFSRHPLNVPLDLIALRSGVPENLPGRCTD |
Ga0187883_105199661 | 3300018037 | Peatland | MSAVPSPVFDETPQRISPRHPINVPLDLIALRSGVPENLPGRCTDISEAG |
Ga0187871_101396241 | 3300018042 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPGRCTDISEAGVGAVVAGE |
Ga0187784_113638572 | 3300018062 | Tropical Peatland | MSTATLMGLETKASRRAFSRHPIDVRLDLIALRSGVPENLPGRCTDLSEGGMGAVVAGEL |
Ga0187769_113447142 | 3300018086 | Tropical Peatland | MSAAPSMAFDRELRRIFPRLPINVPLDLIALRSGVPENLPGRCTDISE |
Ga0187770_102067782 | 3300018090 | Tropical Peatland | MSAGTSDAFGRTSPRGFPRYPVKVPLDVIALRSGIPQNLPGRCVDLSE |
Ga0179592_103984242 | 3300020199 | Vadose Zone Soil | MSAARSPVLEETRERGFNRHPINVPLDLIALRSGVP |
Ga0210395_108504391 | 3300020582 | Soil | MSAAPSRVLETPQRGFSRHHINVPLDLIVLRSGVPENLPGRCIDVSEAG |
Ga0210387_106966052 | 3300021405 | Soil | MSAARAPALEGTRERVFPRHPINVTLDLIALRSGVPDNLPGRCTDISEAGVGAVVAGELAAG |
Ga0210394_103080722 | 3300021420 | Soil | MSAARAPALEGTRERVFPRHPINVNLDLIVLRSGVPDNLPGRCTDISEAGVGAVVAGDLAAG |
Ga0210390_104336061 | 3300021474 | Soil | MSAAASPALEKAQRRNSPRHPINVPLDVILLRSGVPENLP |
Ga0210402_103096541 | 3300021478 | Soil | MSAAASPALEKAQRRNSPRHPINVPLDVILLRSGVPENLPG |
Ga0224541_10121751 | 3300022521 | Soil | MSAARALALEETPRRLFPRHPINVPLDLIVLRSGVPENLPGRCTDISEA |
Ga0208189_10237552 | 3300025444 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPGRCTDISETGA |
Ga0208455_10215662 | 3300025453 | Peatland | MSSAPSMAREETPRRIFPRHPINVPLDLIALRSGVPENLPGRCT |
Ga0208562_10517632 | 3300025460 | Peatland | MSAAPSPAFEEASRRVFPRHPINVPLDVIALRSGDPENLPGRCTDLSEAGVGAVVA |
Ga0208692_11016791 | 3300025472 | Peatland | MSAAPSLVFDETTQRVFPRHPINVPLDLIVLQSGVPENLPGR |
Ga0208563_10841932 | 3300025501 | Peatland | MSAAPSPAFEEASRRVFPRHPINVPLDVIALRSGDPENLPG |
Ga0208820_10736001 | 3300025576 | Peatland | MSAAPALAFEEAPRRVFPRHPITVPLDLIVLRSGVPETLPG |
Ga0208691_11578681 | 3300025612 | Peatland | MSAAPSRVFRTPQRGFSRHPISVPLDLIALRSGVPENLPGRCTDISD |
Ga0209584_100519581 | 3300025878 | Arctic Peat Soil | MSAAPAPAFEKTPRRVSLRHPINIPLDLIALRSGVPENLPGRCTDISEA |
Ga0179587_101545682 | 3300026557 | Vadose Zone Soil | MSAARSPVLEETRERGFNRHPINVPLDLIALRSGVPDNLPGRCTDISEAGVGAVVAGE |
Ga0209332_10997021 | 3300027439 | Forest Soil | MSAVPSPTYEETLRRGFPRHAISVPLDLIALQSGVPENLPGRCTDISE |
Ga0209220_10844271 | 3300027587 | Forest Soil | MSAAQAPVLEETRERVFPRHPINVTLDLIALRSGVPDNLPGRCTDI |
Ga0209217_10842622 | 3300027651 | Forest Soil | MSAARSPVLEETRERVFPRHPINVTLDLIALRSGVPDNLPGRCTDIS |
Ga0209009_10964662 | 3300027667 | Forest Soil | MSAGRAPVLEETRERVFPRHPINITLDLIALRSGVPDNLPGRCTDISEAGVGAVVAGEL |
Ga0209333_10348062 | 3300027676 | Forest Soil | MSAARALALEETPRRLFPRHPINVPLDLIVLRSGVPENLP |
Ga0209530_11755821 | 3300027692 | Forest Soil | MSAATAMALEKAPRRVVSRKPINVPLDLIALRSGV |
Ga0209038_102013911 | 3300027737 | Bog Forest Soil | MSAVPTPVFVEAPQRVFPRHPINVPLDLIALRSGVPESLPGRCTDISEAGVGTVVAGEL |
Ga0209517_106509041 | 3300027854 | Peatlands Soil | VSAGTSLALEKTPRRGFLRFPVKVPLDVIALRSGIPQNLPGRCTDVSEGGVG |
Ga0209693_103748122 | 3300027855 | Soil | MSAAPSRVLETPQRGFSRHHINVPLDLIVLRSGVPENLPGRCIDVSEAGLGAVIAGEHGLVQRYP |
Ga0209166_104822342 | 3300027857 | Surface Soil | MSAVPSPEYDDAPHRVFPRQPIRVPLDLIALRSGVPENLPGRCTDISEAGVGAVVSGELAVG |
Ga0209067_103471552 | 3300027898 | Watersheds | MSAAPLPAFEETPQRRFPRRPINVPLDLIALRSGIPETLPGRCTDISETGL |
Ga0209006_106546052 | 3300027908 | Forest Soil | MSAAASPALEKAQRRNSPRHPINVPLDVILLRSGVP |
Ga0302159_100976891 | 3300028646 | Fen | MCAAPSLALAKTERRVLSRYAVNVALDVIALRSGVPENL |
Ga0302231_104869992 | 3300028775 | Palsa | MSAARALALEETPRRLFPRHPINVPLDLIVLRSGVPENLPGRCTDISEAGVGAVVAGE |
Ga0302225_100329551 | 3300028780 | Palsa | MSAATALALEKPRRIFQRHPIRTRLDLIALRSGVPENLPGRCTDISEAGVGAVVAGEL |
Ga0302201_104128501 | 3300028785 | Bog | MSAAPLLALESTPQRGFPRHPIAVPLDLIALRSGVPETLPGRCTDITEAGLGAVIAGELA |
Ga0302189_100273661 | 3300028788 | Bog | MSAAPSLAFEATPQRGFPRHPIHVPLDLIVLRSGVPENLPGRCMDISEAGLGAVVA |
Ga0302221_102632601 | 3300028806 | Palsa | MSAATALALEKPRRIFQRHPIRTRLDLIALRSGVPENLPGRCTDISEAGVGAVVAGELVP |
Ga0311329_105403781 | 3300029907 | Bog | MSAAPSLAFEATPQRGFPRHPIHVPLDLIVLRSGVPENLPGRCMDISEAGLGAVV |
Ga0311328_109035002 | 3300029939 | Bog | MSAAPLLALESTPQRGFPRHPIAVPLDLIALRSGVPETLPGRCTDITEAGL |
Ga0302210_100471562 | 3300029995 | Fen | MCAAPSLALAKTERRVLSRYAVNVALDVIALRSGV |
Ga0311337_119199831 | 3300030000 | Fen | MSAAPAPAFEKTPRRVSLRHPINIPLDLIALRSGVPENL |
Ga0302270_106989432 | 3300030011 | Bog | MSAAPSLAFEATPQRGFPRHPIHVPLDLIVLRSGVPENLPGRCMDISEAGLGAVVAGE |
Ga0302282_10652961 | 3300030045 | Fen | MSAAPLLALESTPQRGFPRHPIAVPLDLIALRSGVPE |
Ga0311356_102640751 | 3300030617 | Palsa | MSAATAPALEETPQRNFPRHPINVPLDLIALRSGVPENLPGRCTDI |
Ga0170824_1197664621 | 3300031231 | Forest Soil | MSAARSPVLEETRERGFNRHPINVPLDMIALRSGVPENLPGRCTDISEA |
Ga0302326_100728611 | 3300031525 | Palsa | MSAAPAMALIETPRRAFARHPVNVPLDLIVLRSGVPENLPGR |
Ga0307475_111989851 | 3300031754 | Hardwood Forest Soil | MSAARSPVLEQTRERGFNRHPINVPLDLIALRSGVPDNLPGRCTDISEAGVGAVV |
Ga0306921_113529151 | 3300031912 | Soil | MSAAPSMSLEPASQRAIPRRPLFVPLDVIVLRSGIPENLPGRCTDLSEGGVGAIVAGDLIPGHQVA |
Ga0306922_120591082 | 3300032001 | Soil | MSAAPSMSLEPASQRAIPRRPLFVPLDVIVLRSGIPENLPGRCT |
Ga0335069_114547922 | 3300032893 | Soil | MSAAPSLALETSQRRAYPRHPVHMTVDVVVLRSGLPVNLPGRCTDLSEAGV |
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