Metagenome / Metatranscriptome Family F067623

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067623
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	78 residues
Representative Sequence	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELSSGQRLLKGFAP
Number of Associated Samples	115
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.00 %
% of genes near scaffold ends (potentially truncated)	22.40 %
% of genes from short scaffolds (< 2000 bps)	85.60 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.600 % of family members)
Environment Ontology (ENVO)	Unclassified (29.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.07% β-sheet: 0.00% Coil/Unstructured: 27.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF10114	PocR	16.80
PF12833	HTH_18	4.00
PF00365	PFK	2.40
PF03737	RraA-like	1.60
PF01527	HTH_Tnp_1	1.60
PF06197	DUF998	0.80
PF07883	Cupin_2	0.80
PF01152	Bac_globin	0.80
PF00011	HSP20	0.80
PF13276	HTH_21	0.80
PF01471	PG_binding_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	2.40
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	1.60
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.80
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	44.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	44.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	40.00 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.00 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.00 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.00 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	40.00 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17408195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4288	Open in IMG/M
2166559005\|cont_contig27077	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
2170459005\|F1BAP7Q01A31IH	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
2209111022\|2221221770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1016008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300004156\|Ga0062589_102251245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300004157\|Ga0062590_101843494	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300004157\|Ga0062590_102546121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300004643\|Ga0062591_100998605	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300004643\|Ga0062591_102906478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300005167\|Ga0066672_10165339	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300005167\|Ga0066672_10575030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300005171\|Ga0066677_10003825	All Organisms → cellular organisms → Bacteria	5894	Open in IMG/M
3300005175\|Ga0066673_10067321	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300005175\|Ga0066673_10459886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300005176\|Ga0066679_10065299	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300005179\|Ga0066684_10087919	Not Available	1877	Open in IMG/M
3300005184\|Ga0066671_10003662	All Organisms → cellular organisms → Bacteria	5382	Open in IMG/M
3300005187\|Ga0066675_10373006	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005294\|Ga0065705_10394781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300005295\|Ga0065707_10029472	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300005329\|Ga0070683_101869642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300005331\|Ga0070670_100891681	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005347\|Ga0070668_100652365	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005353\|Ga0070669_100099210	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300005364\|Ga0070673_100108062	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300005364\|Ga0070673_101167878	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005434\|Ga0070709_10888640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300005436\|Ga0070713_100515931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300005439\|Ga0070711_100019533	All Organisms → cellular organisms → Bacteria → Proteobacteria	4348	Open in IMG/M
3300005454\|Ga0066687_10087728	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300005543\|Ga0070672_100490353	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005552\|Ga0066701_10061840	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300005553\|Ga0066695_10058653	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300005554\|Ga0066661_10627153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300005559\|Ga0066700_10094632	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300005561\|Ga0066699_11184199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300005566\|Ga0066693_10040668	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300005569\|Ga0066705_10303225	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005575\|Ga0066702_10021018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3185	Open in IMG/M
3300005576\|Ga0066708_10396652	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006046\|Ga0066652_101433152	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006755\|Ga0079222_10184609	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300006796\|Ga0066665_10450345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1062	Open in IMG/M
3300006797\|Ga0066659_11714020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300006804\|Ga0079221_10649481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	723	Open in IMG/M
3300006854\|Ga0075425_102476444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300006871\|Ga0075434_101691212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300006904\|Ga0075424_101044484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	871	Open in IMG/M
3300009162\|Ga0075423_12038432	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009177\|Ga0105248_11444966	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300009553\|Ga0105249_12625966	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300010321\|Ga0134067_10201554	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300010335\|Ga0134063_10695155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300010373\|Ga0134128_10339185	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300010396\|Ga0134126_11110295	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300012198\|Ga0137364_10309441	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012199\|Ga0137383_11208851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012200\|Ga0137382_10054634	All Organisms → cellular organisms → Bacteria	2507	Open in IMG/M
3300012285\|Ga0137370_10198956	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300012356\|Ga0137371_10844303	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012476\|Ga0157344_1000389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1668	Open in IMG/M
3300012477\|Ga0157336_1029135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300012486\|Ga0157331_1011069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300012498\|Ga0157345_1039931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300012503\|Ga0157313_1003972	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300012508\|Ga0157315_1005027	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300012515\|Ga0157338_1053773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012517\|Ga0157354_1004329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1194	Open in IMG/M
3300012957\|Ga0164303_11238703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012958\|Ga0164299_10065319	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300012960\|Ga0164301_10079895	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300012961\|Ga0164302_10066020	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300012977\|Ga0134087_10244075	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012985\|Ga0164308_11885110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012986\|Ga0164304_10018289	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300012987\|Ga0164307_10235474	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300012988\|Ga0164306_10164927	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300012989\|Ga0164305_10066994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2178	Open in IMG/M
3300013296\|Ga0157374_11003302	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300013297\|Ga0157378_11639242	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300013306\|Ga0163162_10209559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2078	Open in IMG/M
3300014150\|Ga0134081_10305007	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300014157\|Ga0134078_10509348	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300015371\|Ga0132258_13980290	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300015372\|Ga0132256_102777879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300015373\|Ga0132257_102517688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300015373\|Ga0132257_103549651	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300015374\|Ga0132255_102355593	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300017792\|Ga0163161_11168180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300018051\|Ga0184620_10060213	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300018072\|Ga0184635_10125897	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300019361\|Ga0173482_10313522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300019870\|Ga0193746_1012203	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300019877\|Ga0193722_1048052	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300019877\|Ga0193722_1135104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300019879\|Ga0193723_1021714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1963	Open in IMG/M
3300020006\|Ga0193735_1091908	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300020015\|Ga0193734_1022721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1183	Open in IMG/M
3300020059\|Ga0193745_1015767	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300023058\|Ga0193714_1014831	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300025903\|Ga0207680_10858761	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300025921\|Ga0207652_11432271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300025925\|Ga0207650_10359160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1200	Open in IMG/M
3300025928\|Ga0207700_10931757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300025931\|Ga0207644_10732309	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300025931\|Ga0207644_11597133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300026089\|Ga0207648_10952629	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300026095\|Ga0207676_11102505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	785	Open in IMG/M
3300026305\|Ga0209688_1085638	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300026312\|Ga0209153_1012542	All Organisms → cellular organisms → Bacteria	2692	Open in IMG/M
3300026312\|Ga0209153_1135315	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300026316\|Ga0209155_1038280	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300026322\|Ga0209687_1009066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3318	Open in IMG/M
3300026330\|Ga0209473_1140029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300026334\|Ga0209377_1087511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1314	Open in IMG/M
3300026538\|Ga0209056_10258718	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300027775\|Ga0209177_10009404	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300030945\|Ga0075373_11366288	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031231\|Ga0170824_101450920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300031446\|Ga0170820_13697990	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1763	Open in IMG/M
3300031469\|Ga0170819_14878408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2496	Open in IMG/M
3300031474\|Ga0170818_108670575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	968	Open in IMG/M
3300031474\|Ga0170818_113796008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	861	Open in IMG/M
3300033412\|Ga0310810_11023303	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.80%
Host-Associated	Host-Associated	26.40%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.20%
Plants	Host-Associated → Plants	26.40%
Aquatic	Environmental → Aquatic	1.60%
Modeled	Engineered → Modeled	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.20%
Sediment	Environmental → Aquatic → Sediment	1.60%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.40%
Loam	Environmental → Terrestrial → Soil → Loam	8.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.80%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01063310	2088090014	Soil	MKLTATQRSALYFKRHKASKDRATLLRHLRAASTNQSGNLQQLTFGHAYIAQELASGQRLLRGFAS
cont_0077.00002220	2166559005	Simulated	LEFAAVACRLKNLNESEMEAAARQRSAIYFMRHKASKRRAVLFRQLRASATNQICDLKQLTLGNAYITPELSSGQRLLKGFAS
E41_00928080	2170459005	Grass Soil	LEFAAVACRLKNFNESEMEAAARQRSAIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNAYITPELSSGQRLLKRV
2222070669	2209111022	Grass Soil	MEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP
KanNP_Total_noBrdU_T14TCDRAFT_10160082	3300000596	Soil	LEFAAVACRLKNLNESEMEAAARQRSAIFFKRHKASKSRAVLFRQLRASATNQICDLKQLTLGNAYITPELSSGQRLLKGFAS*
Ga0062589_1022512452	3300004156	Soil	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELSSGQRLLKGFAP*
Ga0062590_1018434941	3300004157	Soil	EMEAAARQRSEIYFMRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0062590_1025461212	3300004157	Soil	AARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYVTQELFSGQQLLKGFAP*
Ga0062591_1009986052	3300004643	Soil	LAFAAVACGLKDLIESEMEAAARQRSEIYFMRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0062591_1029064781	3300004643	Soil	MEAAARQRSAIYFKRHKASKSRAMLFRQLRASATNQICDLKQLTLGNAYITPELSSGQRLLKGFAS*
Ga0066672_101653392	3300005167	Soil	LAFAAVACHLKDLIESEMEAAARQRSEIYFKRHKASRCRAVLFRRLRASATNQTCDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0066672_105750301	3300005167	Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKHLTLGNAYITQELSSGQRLLKGFAS*
Ga0066677_100038255	3300005171	Soil	LKDLIEREMEAAARQRSEIYFIRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP*
Ga0066673_100673213	3300005175	Soil	LEFAAVACRLKNLIESEMEAARQRSAIYFKRHKASKRRAVLFRQLRASATNQICDLKRLTLGNAYITPELSSGQRLLKGFAS*
Ga0066673_104598862	3300005175	Soil	MENEMEAEARQRSAIYFKRHKASKLRAVLFRRLRSSATNQVYHLKQLTLGNAFITPELPSGQRLLKGFAP*
Ga0066679_100652993	3300005176	Soil	LAFAAVACHLKDLIESEMEAAARQRSEIYFIRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP*
Ga0066684_100879191	3300005179	Soil	LKDLIELEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICALKQLTLGNTYITQELFSGQRLSKGFAP*
Ga0066671_100036627	3300005184	Soil	LAFAAVACGLKDLIEREMEAAARQRSEIYFIRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP*
Ga0066675_103730061	3300005187	Soil	LEFAAVGCHLKNVIEGEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASATNRICDLKQLTLGNAYIALELSSGQRLLKGFAS*
Ga0065705_103947812	3300005294	Switchgrass Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQATLGNTYVTQELFSGQRLLKGFAP*
Ga0065707_100294722	3300005295	Switchgrass Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0070683_1018696422	3300005329	Corn Rhizosphere	LAFAAVACGLKDVIENEREAAARQRSEIYFMRHKASRRRAVLFRQLRASTTNEICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0070670_1008916812	3300005331	Switchgrass Rhizosphere	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQPTLGNTYITQELSSGQRLLKGFAS*
Ga0070668_1006523652	3300005347	Switchgrass Rhizosphere	MIESEMESAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNAYITSELPSGQRLLKGRILEMRGGTIRRVVRGVGSQVVMSKQNAS
Ga0070669_1000992102	3300005353	Switchgrass Rhizosphere	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0070673_1001080623	3300005364	Switchgrass Rhizosphere	LAFAAVACGLKDLIESEMEAAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICNLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0070673_1011678782	3300005364	Switchgrass Rhizosphere	METAARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGRILETRGGAIR
Ga0070709_108886402	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LKDLIKSEMEAAARQRSEIYFKRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0070713_1005159313	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LKDLIKSEMEAAARQRSEIYFKRHKASRRRAVLFRQLRASTTNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP*
Ga0070711_1000195333	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0066687_100877283	3300005454	Soil	LKDLIELEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP*
Ga0070672_1004903531	3300005543	Miscanthus Rhizosphere	LEFAAVACGLKDVIENEREAAARQRSEIYFMRHKASRRRAVLFRQLRASATSQICDLKQLTLGNTYVTQELFSGQRLLKVRTLDRRCGAINRVIR
Ga0066701_100618402	3300005552	Soil	LLLEDLIESEMEPTARQRSAIYFKQHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYITQELSSGQRLLKGFAS*
Ga0066695_100586533	3300005553	Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYITQELSSGQRLLKAFAS*
Ga0066661_106271531	3300005554	Soil	LLLEDLIESEMEPTARQRSAIYFKQHKPPKRRAVLFQQLRASATNQICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0066700_100946324	3300005559	Soil	LKDLIEPEMEAAARQRNEIYFLRHKASRRRAVLFRQLRASATNQICALKQLTLGNTYITQELFSGQ
Ga0066699_111841992	3300005561	Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0066693_100406683	3300005566	Soil	LEFAAVGCHLKNVIEGEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASATNRICDLKQLTLGKAYITPELSSGQRLLKGFAS*
Ga0066705_103032252	3300005569	Soil	LKDLIEPEMEAAARQRNEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLSKGFAP*
Ga0066702_100210185	3300005575	Soil	LKDLIEPEMEAAARQRNEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP*
Ga0066708_103966521	3300005576	Soil	LIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYIAQELSSGQRLLKGFAS*
Ga0066652_1014331522	3300006046	Soil	LEFAAVGCHLKNVIEGEMEAAARQRSAIYFKRHKASKSGAMLFRQLRASATNRICDLKQLTLGNAYIALELSSGQRLLKGFAS*
Ga0079222_101846092	3300006755	Agricultural Soil	LAFAAVACGLKDLSESEMEAAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICNLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0066665_104503452	3300006796	Soil	LLLEDLIESEMEPTARQRSAIYFKQHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYIAQELSSGQRLLKGFAS*
Ga0066659_117140201	3300006797	Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKHLTLGNAYITQELSSGQRLLKGFTS*
Ga0079221_106494812	3300006804	Agricultural Soil	LAFAAVACGLKDPSESEMETAARQRSEIYFMRHKASRRRAMLFRQLRASAKNKICDLEQTTLSNSYITQELSSGQRLLKGFAS*
Ga0075425_1024764441	3300006854	Populus Rhizosphere	KLSRKLNYFNTYYLLVAFAAVACGLKDTRESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0075434_1016912122	3300006871	Populus Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP*
Ga0075424_1010444842	3300006904	Populus Rhizosphere	LKNLIESEMEAAARQRSAIYFKRHKASKRRAMLFRQFRASATKQICDLKQLTLGNAYITPELSSGQRLLKGFAS*
Ga0075423_120384322	3300009162	Populus Rhizosphere	ESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAP*
Ga0105248_114449661	3300009177	Switchgrass Rhizosphere	LAFAAVACGLKDVIENEREEAARQRIDIYFMRHKASRRRAVLFRQLRASATSQICDLKQLTLGNTYVTQEL
Ga0105249_126259662	3300009553	Switchgrass Rhizosphere	VASAAVACRLKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0134067_102015542	3300010321	Grasslands Soil	ELAFAAVACHLKDLIESEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLSKGFAP*
Ga0134063_106951551	3300010335	Grasslands Soil	LEFAAVGCHLKNVIEGEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLSKGFAP*
Ga0134128_103391852	3300010373	Terrestrial Soil	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0134126_111102952	3300010396	Terrestrial Soil	LAFAAVACGLKDLSESEMETAARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0137364_103094411	3300012198	Vadose Zone Soil	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQATLGNTYVSQELFSGQRLLKGFAP*
Ga0137383_112088511	3300012199	Vadose Zone Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQIYDLKQLTLGNASITQELSSGQRLLKGFAS*
Ga0137382_100546342	3300012200	Vadose Zone Soil	LEFAAVACRLKNLIESEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASATNRICDLKQLTLGNAYITPALSSGQRLLKGFAS*
Ga0137370_101989562	3300012285	Vadose Zone Soil	LELAAVACGLKNLIESEMEAAARQRSAIYFKRHKASKSGAMLFRQLRASATNRICDLKQLTLGNAYITPELSSGQRLLKGFVS*
Ga0137371_108443032	3300012356	Vadose Zone Soil	LLLEHLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYITQELSSGQRLLKAFAS*
Ga0157344_10003892	3300012476	Arabidopsis Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAALFRQLRASTTNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0157336_10291351	3300012477	Arabidopsis Rhizosphere	METAARQRSEAYFMRHKASRRRAMLLRQLRAAAKNKICNLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0157331_10110692	3300012486	Soil	LAFAAVACGLKDLSESEMEAAARQRSETYFMRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0157345_10399311	3300012498	Arabidopsis Rhizosphere	LAFAAVACGLKDLSESEMETAARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITEELSSGQRLLKGFAT*
Ga0157313_10039722	3300012503	Arabidopsis Rhizosphere	LAFAAVACGLKDLIESEMEAAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0157315_10050272	3300012508	Arabidopsis Rhizosphere	MSESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0157338_10537731	3300012515	Arabidopsis Rhizosphere	DMSESEMETAARQRSEIYFMRHKASRRRAVLFRKLRASATNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP*
Ga0157354_10043292	3300012517	Unplanted Soil	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0164303_112387031	3300012957	Soil	AAVACRLKDVIKSEMETAARQRSEIYFKRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164299_100653192	3300012958	Soil	LAFAAVACGLKDVIQSEREAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYVTQELFSGQRLLKGFAP*
Ga0164301_100798952	3300012960	Soil	VACGLKDVIQSEMETAARQRSEIYFKRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164302_100660203	3300012961	Soil	LAFAAVACRLKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0134087_102440752	3300012977	Grasslands Soil	LLLEDLIESEMEPTARQRSAIYFKQHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYIAQELS*
Ga0164308_118851101	3300012985	Soil	VACGLKDVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164304_100182896	3300012986	Soil	LAFAAVACGLKDVIESEREAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164307_102354741	3300012987	Soil	LAFTAVACGLKDVIQSEREAAARQRSEIYFKRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164306_101649272	3300012988	Soil	VAFAAVACRLKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP*
Ga0164305_100669944	3300012989	Soil	LKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYVTQELFSGQRLLKGFAP*
Ga0157374_110033021	3300013296	Miscanthus Rhizosphere	LAFAAVACGLKDLSESEMETAARQRSETYFMRHKVSRRRAALFRQLRASTTNKICGLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0157378_116392421	3300013297	Miscanthus Rhizosphere	AARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0163162_102095595	3300013306	Switchgrass Rhizosphere	ACRLKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQEFFSGQRLLKGFAP*
Ga0134081_103050071	3300014150	Grasslands Soil	LLLEDLIESEMEPTARQRSAIYFKRHKASKRRAVLFQQLRASATNQICNLKQLTLGNAYTTQELSSGQRLLKGFAS*
Ga0134078_105093481	3300014157	Grasslands Soil	SAIEAAARQRSEIYFKRHKASRRRAVLFRQLRASATNQMCDLKQLTLGNAYIAQELSSGQRLLKGFAS*
Ga0132258_139802902	3300015371	Arabidopsis Rhizosphere	LEFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0132256_1027778792	3300015372	Arabidopsis Rhizosphere	METAARQRSEAYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0132257_1025176882	3300015373	Arabidopsis Rhizosphere	LAFAAVACGLKDLSESEMEAAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0132257_1035496511	3300015373	Arabidopsis Rhizosphere	LAFAAVACGLKDLSESEMETAARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGFAS*
Ga0132255_1023555931	3300015374	Arabidopsis Rhizosphere	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS*
Ga0163161_111681802	3300017792	Switchgrass Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQATLGNTYVTQELFSGQRLLKGFAP
Ga0184620_100602131	3300018051	Groundwater Sediment	LAFAAVACRLKDLIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGDTYITQELFSGQRLLKGFAP
Ga0184635_101258971	3300018072	Groundwater Sediment	LAFAAVACRLKDVIKSEMETAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYITQELFSGQRLLKGFAP
Ga0173482_103135222	3300019361	Soil	LAFAAVACGLKDMSESEMEAAARQRSEIYFTRHKASRRRAMLFRQLRASAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS
Ga0193746_10122032	3300019870	Soil	LAFAAVACGLKEVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYITQELFSGQRLLKGFAP
Ga0193722_10480521	3300019877	Soil	LAFAALACRLKDVVESEMEAAARQRSEIYFKRHKASRRRAVLFRQLRASATNQICDLKQLTLGDTYVTQELFSGQRLLKGFAP
Ga0193722_11351041	3300019877	Soil	VACGLKEVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYITQELFSGQRLLKGFAP
Ga0193723_10217142	3300019879	Soil	LAFAAVACGLQDLIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQLALGNTYVTQELFSGQRLLKGFAP
Ga0193735_10919081	3300020006	Soil	ESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRPSATNQICDLKQPTLGDTYITQELFSGQRLLKGFAP
Ga0193734_10227212	3300020015	Soil	LAFAAVACGLKEVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRPSATNQICDLKQPTLGDTYITQELFSGQRLLKGFAP
Ga0193745_10157673	3300020059	Soil	LAFVAVACGLKEVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYITQELFSGQRLLKGFAP
Ga0193714_10148311	3300023058	Soil	LAFAAVACGLKEVIESEMEAAARQRSEIYFMRHKASRRRAVLFRQLRPSATNQICDLKQPTLGDTYITQELFSGQR
Ga0207680_108587612	3300025903	Switchgrass Rhizosphere	METAARQRSETYFMRHKASRRRAALFRQLRASTTNKICDLKQLTLGNTYITQELSSGQRLLKGFAS
Ga0207652_114322711	3300025921	Corn Rhizosphere	LAFAAVACGLKDLSESEMETAARQRSETYFMRHKASRRRAALFRQLRASTTNKICGLKQLTLGNTYITQELSSGQRLLKGFAS
Ga0207650_103591602	3300025925	Switchgrass Rhizosphere	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQPTLGNTYITQELSSGQRLLKGFAS
Ga0207700_109317572	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VAFAAVASRLKDVIKSEMETAARQRSEIYFKRHKASRRRAVLFRQLRASTTNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP
Ga0207644_107323091	3300025931	Switchgrass Rhizosphere	LAFAAVACGLKDMSESEMETAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICDLKQTTLGNTYITQELSSGQRLLKGFAS
Ga0207644_115971331	3300025931	Switchgrass Rhizosphere	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRKLRASATNQICDLKQPTLGNTYVTQELFS
Ga0207648_109526292	3300026089	Miscanthus Rhizosphere	VQDLIESEMEAAARQRSEIYFMRHKVSRRRAVLFRQLRASATNEICDLKQLTLGNTYVTQELF
Ga0207676_111025052	3300026095	Switchgrass Rhizosphere	METAARQRSETYFMRHKASRRRAALFRQLRASTTNEICDLKQLTLGNTYITQELSSGQRLLKGFAS
Ga0209688_10856381	3300026305	Soil	LEFAAVACGLKNLIESEMEAAARQRSAIYFKRHKASKSGAMLFRQLRASATNRICDLKQLTLGKAYITPELSSGQRLLKGFAS
Ga0209153_10125422	3300026312	Soil	LAFAAVACHLKDLIESEMEAAARQRSEIYFKRHKASRCRAVLFRRLRASATNQTCDLKQLTLGNTYITQELSSGQRLLKGFAS
Ga0209153_11353153	3300026312	Soil	LAFAAVACGLKDLIEREMEAAARQRSEIYFIRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP
Ga0209155_10382803	3300026316	Soil	LEFAAVACRLKNLIESEMEAARQRSAIYFKRHKASKRRAVLFRQLRASATNQICDLKRLTLGNAYITPELSSGQRLLKGFAS
Ga0209687_10090665	3300026322	Soil	LKDLIELEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICDLKQLTLGNTYITQELFSGQRLLKGLAP
Ga0209473_11400292	3300026330	Soil	LKDLIELEMEAAARQRSEIYFLRHKASRRRAVLFRQLRASATNQICALKQLTLGNTYITQELFSGQRLSKGFAP
Ga0209377_10875112	3300026334	Soil	LLLEDLIESEMEPTARQRSAIYFKQHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYITQELSSGQRLLKGFAS
Ga0209056_102587182	3300026538	Soil	LLLEDLIESEMEPTARQRSAIYFKQHKASKRRAVLFQQLRASATNQICDLKQLTLGNAYIAQELSSGQRLLKGFAS
Ga0209177_100094043	3300027775	Agricultural Soil	LAFAAVACGLKDLSESEMEAAARQRSEIYFMRHKASRRRAMLLRQLRAAAKNKICNLKQTTLGNTYITQELSSGQRLLKGFAS
Ga0075373_113662882	3300030945	Soil	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAMLFHQLRASATNQICDLKQLTLGNAYITPELSSGQRLLKGFAS
Ga0170824_1014509202	3300031231	Forest Soil	LEFAAVACRLKNLIESEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASAANQICDLKQLTLGNAYITPELSSGQRLLKGFAS
Ga0170820_136979903	3300031446	Forest Soil	LKNLIESEMEAAARQRSEIYFMRHKASKGRAVLFRQLRASATNQICDLKQLTLGNAYITPELPSGQRLLKGFAS
Ga0170819_148784084	3300031469	Forest Soil	LKDLIKSEMEAAARQRSEIYFMRHKASRRRAVLFRQLRASATNQICDLKQPTLGNTYVTQELFSGQRLLKGFAP
Ga0170818_1086705753	3300031474	Forest Soil	LIKSEMEAAARQRSEIYFMRHKASRRRAMLFRQLRASATNQICDLKQLTLGNAYITPELPSGQRLLKGFAS
Ga0170818_1137960081	3300031474	Forest Soil	LKNLIESEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASAANQICDLKQLTLGNAYITPELSSGQRLLKGFAS
Ga0310810_110233032	3300033412	Soil	LEFAAVACGLKNLIESEMEAAARQRSAIYFKRHKASKRRAMLFRQLRASATNRICDLKQLTLGNAYITPELSSGQRLLKGFAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067623

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences