NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067603

Metagenome / Metatranscriptome Family F067603

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067603
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 46 residues
Representative Sequence GNQRPKRRKDKLIRLDDLIPKQDVTGGHQLLFGVTDTTRTTNNPTKEN
Number of Associated Samples 105
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 95.20 %
% of genes from short scaffolds (< 2000 bps) 87.20 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.800 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(16.800 % of family members)
Environment Ontology (ENVO) Unclassified
(36.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.400 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.26%    β-sheet: 0.00%    Coil/Unstructured: 94.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00208ELFV_dehydrog 4.80
PF01263Aldose_epim 4.00
PF02812ELFV_dehydrog_N 3.20
PF11138DUF2911 2.40
PF01066CDP-OH_P_transf 2.40
PF03544TonB_C 1.60
PF03734YkuD 1.60
PF13419HAD_2 0.80
PF07963N_methyl 0.80
PF08241Methyltransf_11 0.80
PF01709Transcrip_reg 0.80
PF01148CTP_transf_1 0.80
PF00482T2SSF 0.80
PF02452PemK_toxin 0.80
PF13884Peptidase_S74 0.80
PF08410DUF1737 0.80
PF03739LptF_LptG 0.80
PF13174TPR_6 0.80
PF01435Peptidase_M48 0.80
PF00041fn3 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 8.00
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 4.80
COG0676D-hexose-6-phosphate mutarotaseCarbohydrate transport and metabolism [G] 4.00
COG2017Galactose mutarotase or related enzymeCarbohydrate transport and metabolism [G] 4.00
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 2.40
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 2.40
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 2.40
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 1.60
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 1.60
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 1.60
COG0217Transcriptional and/or translational regulatory protein YebC/TACO1Translation, ribosomal structure and biogenesis [J] 0.80
COG0795Lipopolysaccharide export LptBFGC system, permease protein LptFCell wall/membrane/envelope biogenesis [M] 0.80
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 0.80


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.80 %
UnclassifiedrootN/A3.20 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01BLVLZAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium536Open in IMG/M
2170459010|GIO7OMY02I3K3HNot Available565Open in IMG/M
2189573002|GZIGXIF01AFKEDAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia503Open in IMG/M
3300000956|JGI10216J12902_127390648All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium548Open in IMG/M
3300004157|Ga0062590_100999772All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium795Open in IMG/M
3300004157|Ga0062590_102646580All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia534Open in IMG/M
3300005103|Ga0066813_1006655All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium635Open in IMG/M
3300005177|Ga0066690_10305929All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1074Open in IMG/M
3300005181|Ga0066678_10271987All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300005293|Ga0065715_10773213All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia621Open in IMG/M
3300005332|Ga0066388_104514072All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium709Open in IMG/M
3300005332|Ga0066388_106260861All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia600Open in IMG/M
3300005332|Ga0066388_106449846All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300005337|Ga0070682_100285299All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300005343|Ga0070687_100206953All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300005446|Ga0066686_10057478All Organisms → cellular organisms → Bacteria2395Open in IMG/M
3300005447|Ga0066689_10997597All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium515Open in IMG/M
3300005454|Ga0066687_10304215All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300005467|Ga0070706_101611111All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium592Open in IMG/M
3300005468|Ga0070707_100580446All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1083Open in IMG/M
3300005540|Ga0066697_10058803All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2191Open in IMG/M
3300005540|Ga0066697_10571986All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium630Open in IMG/M
3300005556|Ga0066707_10505648All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium784Open in IMG/M
3300005557|Ga0066704_10153202All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1547Open in IMG/M
3300005564|Ga0070664_101717452All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium595Open in IMG/M
3300005569|Ga0066705_10209238All Organisms → cellular organisms → Bacteria → Acidobacteria1224Open in IMG/M
3300005569|Ga0066705_10776028All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M
3300005575|Ga0066702_10273273All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300005618|Ga0068864_100472116All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300006791|Ga0066653_10157781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1112Open in IMG/M
3300006797|Ga0066659_10195262All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1477Open in IMG/M
3300006800|Ga0066660_10365281All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300009012|Ga0066710_101120421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1217Open in IMG/M
3300009038|Ga0099829_11365592All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium585Open in IMG/M
3300009137|Ga0066709_100995283All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1227Open in IMG/M
3300009137|Ga0066709_101010944All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1218Open in IMG/M
3300009137|Ga0066709_102539687All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300009137|Ga0066709_102821023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium644Open in IMG/M
3300009177|Ga0105248_10425472All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1495Open in IMG/M
3300010321|Ga0134067_10481221All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium511Open in IMG/M
3300010323|Ga0134086_10309728All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia615Open in IMG/M
3300010333|Ga0134080_10120572All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300010333|Ga0134080_10576033All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium545Open in IMG/M
3300010335|Ga0134063_10040945All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2001Open in IMG/M
3300010336|Ga0134071_10536959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia607Open in IMG/M
3300010358|Ga0126370_10332632All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1219Open in IMG/M
3300010361|Ga0126378_11242361All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium842Open in IMG/M
3300012200|Ga0137382_10777973All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium688Open in IMG/M
3300012208|Ga0137376_10296184All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300012208|Ga0137376_10814757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium803Open in IMG/M
3300012210|Ga0137378_10249722All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1651Open in IMG/M
3300012210|Ga0137378_10801927All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia854Open in IMG/M
3300012210|Ga0137378_11142960All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium694Open in IMG/M
3300012211|Ga0137377_11927698All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium508Open in IMG/M
3300012285|Ga0137370_10461608All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia774Open in IMG/M
3300012356|Ga0137371_10022292All Organisms → cellular organisms → Bacteria4873Open in IMG/M
3300012356|Ga0137371_10923256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia663Open in IMG/M
3300012359|Ga0137385_10785781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium791Open in IMG/M
3300012363|Ga0137390_11667505All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M
3300012918|Ga0137396_10369763All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1062Open in IMG/M
3300012930|Ga0137407_11915488All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300012971|Ga0126369_10373756All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1455Open in IMG/M
3300012971|Ga0126369_10694684All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1094Open in IMG/M
3300012976|Ga0134076_10200690All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300012977|Ga0134087_10489618All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium617Open in IMG/M
3300012977|Ga0134087_10818863All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
3300012985|Ga0164308_10453154All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300012988|Ga0164306_11448972All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300014157|Ga0134078_10034360All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1684Open in IMG/M
3300014157|Ga0134078_10557493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia542Open in IMG/M
3300015053|Ga0137405_1028517All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3497Open in IMG/M
3300015241|Ga0137418_10418434All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1089Open in IMG/M
3300015372|Ga0132256_100405355All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1466Open in IMG/M
3300015373|Ga0132257_102927551All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300015374|Ga0132255_101240967All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1123Open in IMG/M
3300015374|Ga0132255_104237291All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M
3300016270|Ga0182036_10077021All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2194Open in IMG/M
3300016341|Ga0182035_10063104All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2571Open in IMG/M
3300016341|Ga0182035_10281827All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300017659|Ga0134083_10159367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium917Open in IMG/M
3300017659|Ga0134083_10253518All Organisms → cellular organisms → Bacteria → PVC group737Open in IMG/M
3300018028|Ga0184608_10360308All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium637Open in IMG/M
3300018074|Ga0184640_10468412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium558Open in IMG/M
3300018431|Ga0066655_10031830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2577Open in IMG/M
3300018468|Ga0066662_11842136All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300018482|Ga0066669_11218683All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia679Open in IMG/M
3300018482|Ga0066669_11786292All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300019362|Ga0173479_10633607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium565Open in IMG/M
3300019872|Ga0193754_1012646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium887Open in IMG/M
3300019879|Ga0193723_1113329All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium757Open in IMG/M
3300019880|Ga0193712_1134387All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium516Open in IMG/M
3300020001|Ga0193731_1177770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
3300021418|Ga0193695_1056273All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium854Open in IMG/M
3300022756|Ga0222622_10587604All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium803Open in IMG/M
3300023058|Ga0193714_1010550All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1408Open in IMG/M
3300025918|Ga0207662_10773494All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium676Open in IMG/M
3300025932|Ga0207690_10018675All Organisms → cellular organisms → Bacteria4254Open in IMG/M
3300026307|Ga0209469_1018041All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2518Open in IMG/M
3300026308|Ga0209265_1006658All Organisms → cellular organisms → Bacteria3582Open in IMG/M
3300026323|Ga0209472_1155080All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300026329|Ga0209375_1104548All Organisms → cellular organisms → Bacteria → Acidobacteria1267Open in IMG/M
3300026343|Ga0209159_1036980All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2533Open in IMG/M
3300027846|Ga0209180_10797878All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
3300028819|Ga0307296_10149018All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1263Open in IMG/M
3300028884|Ga0307308_10228005All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia893Open in IMG/M
3300028885|Ga0307304_10531754All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia541Open in IMG/M
3300030923|Ga0138296_1395313All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium659Open in IMG/M
3300030939|Ga0138303_1223285All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1613Open in IMG/M
3300030969|Ga0075394_10001479All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium575Open in IMG/M
3300031022|Ga0138301_1746450All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia636Open in IMG/M
3300031122|Ga0170822_16818317All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium560Open in IMG/M
3300031231|Ga0170824_112280051All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium514Open in IMG/M
3300031446|Ga0170820_17217352All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300031469|Ga0170819_16335940All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium677Open in IMG/M
3300031573|Ga0310915_10402078All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia973Open in IMG/M
3300031677|Ga0307480_1018924All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium544Open in IMG/M
3300031720|Ga0307469_10146205All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1761Open in IMG/M
3300031912|Ga0306921_10059838All Organisms → cellular organisms → Bacteria4346Open in IMG/M
3300031941|Ga0310912_10294441All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300031943|Ga0310885_10562273All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium628Open in IMG/M
3300031944|Ga0310884_10191780All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300031946|Ga0310910_10387968All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1106Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.00%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.40%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005103Soil and rhizosphere microbial communities from Laval, Canada - mgLAAEnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019880Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030939Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_036139902170459005Grass SoilPAGESENQRPKRRKDKLIRLDDLIPKQDVKGGHQLLFGATDTTETTNKEN
F62_083179502170459010Grass SoilRRKDKLIRLNDLIPKQDVTGGQRLLFGVTDKTRTTKNPTKDK
FE1_068204702189573002Grass SoilGESGNQRPKRRKDKLIRLDDLIPNHGVKGGCQLPFGVTDTTQRQNNPNK
JGI10216J12902_12739064823300000956SoilKAKLIRLDDLIPKKDVTGGQRLLFGVTDATQSINKPTKDK*
Ga0062590_10099977213300004157SoilQRPKRRKDKLIRLDDLVPKQDVTGGHQLLFGVTDKTNNPAKDK*
Ga0062590_10264658013300004157SoilRKRPTDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQTTNNPTNKTS*
Ga0066813_100665513300005103SoilGESGNQRPKRRKDKLIRLNDLVPKQDVTGGQRLLFGVTDKTQSTNNPTKDK*
Ga0066690_1030592913300005177SoilPAGESGNQRPKRRKDKLIRLDDLIPKQDVTGGHQVLFGATDTTETTNN*
Ga0066678_1027198713300005181SoilESGNQRPKRRKDKLIRLDDLIPKQDVKGGHQLLFGVTDTTQTTNNPTKEN*
Ga0065715_1077321313300005293Miscanthus RhizosphereKRTRNKLIRLDDLIPEQDVKGGQVLFGVTNTTQTTNNPNK*
Ga0066388_10451407233300005332Tropical Forest SoilKRRKEKLIRLDDLIPKQDVKGGQQLPFGATDTKQTTKNN*
Ga0066388_10626086113300005332Tropical Forest SoilANQRSKRRKDKLIRLDDLIPKQDVKGGRQLLFGVTETTQTTKPAKEK*
Ga0066388_10644984613300005332Tropical Forest SoilPKRRKEKLIRLDDLIPKQDVTGGHQLPFGVTDTTETTNHPTKED*
Ga0070682_10028529923300005337Corn RhizosphereRDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS*
Ga0070687_10020695323300005343Switchgrass RhizosphereTRDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS*
Ga0066686_1005747853300005446SoilNQRPKRRKEKLIRLDDLIPKRDVTGGQQLLFGVTDTTQSTNNPTKDK*
Ga0066689_1099759733300005447SoilKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKKEK*
Ga0066687_1030421513300005454SoilRPKRRKDKLIRLDDLIPKQDVTGGHQLLFGVTETTRTINNPTKEN*
Ga0070706_10161111113300005467Corn, Switchgrass And Miscanthus RhizosphereKDKLIRLDDLIPKQDVKGGGQLLFGVSDTTQTTNPTRES*
Ga0070707_10058044613300005468Corn, Switchgrass And Miscanthus RhizosphereKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNNPRKENQK*
Ga0066697_1005880313300005540SoilESGNQRPKRRKDKVIRLDDLIPKQDVTGGHQLLFGATDAKQTLNNPTKET*
Ga0066697_1057198633300005540SoilSGNQRPKRRKDKLIRLDDLIPKRDVKGGHQLLFGVTDTTKTTNNPAKENQK*
Ga0066707_1050564833300005556SoilSGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNNPTKKEK*
Ga0066704_1015320213300005557SoilPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKENQK*
Ga0070664_10171745213300005564Corn RhizosphereKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS*
Ga0066705_1020923843300005569SoilKLIRLDDLIPKKDVTGGQRLLFGVTDTRQSINKPTKDK*
Ga0066705_1077602823300005569SoilGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKKEK*
Ga0066702_1027327313300005575SoilKDKLIRLDDLIPKQDVTGGRQLLFGLTDAINTTNDPKQES*
Ga0068864_10047211613300005618Switchgrass RhizosphereDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS*
Ga0066653_1015778143300006791SoilQRPKRRKDKLIRLDDLIPKQDVTDGHQLLFGVNDTTQTTNNPTKKEQ*
Ga0066659_1019526213300006797SoilGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKENQK*
Ga0066660_1036528113300006800SoilGNQRPKRRKDKLIRLDDLIPKQDVTGGHQLLFGVTDTTRTTNNPTKEN*
Ga0066710_10112042113300009012Grasslands SoilPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKKEK
Ga0099829_1136559233300009038Vadose Zone SoilPKRKRDKLIRLDDLIPKQDVTGGQQLLFGVTDTTQSINKPTKDK*
Ga0066709_10099528313300009137Grasslands SoilQRPKRRKEKLNRLDDLIPKQDVKGGHQLLFGATDTTETTNKEN*
Ga0066709_10101094413300009137Grasslands SoilPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNKPTKKEK*
Ga0066709_10253968713300009137Grasslands SoilRPKRRKDKLIRLDDLIPKQDVKGGHQLLFGVTDTTETTNKEN*
Ga0066709_10282102333300009137Grasslands SoilGESGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTETTNNPTKENQK*
Ga0105248_1042547213300009177Switchgrass RhizosphereEESGNQRRKRTRDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS*
Ga0134067_1048122113300010321Grasslands SoilGESGNQRPKRRKEKLIRLDDLIPKQDVTGGRQLPLGVTDTTQTTNN*
Ga0134086_1030972813300010323Grasslands SoilGNQRPKRRKEKLIRLDDLIPKQDVTGGRQLPLGVTETTQTTNN*
Ga0134080_1012057213300010333Grasslands SoilRPKRRKDKLIRLDDLIPKQDVKGGYQLLFGATDTTQTTNPTKEN*
Ga0134080_1057603313300010333Grasslands SoilNQRPKRRKEKLIRLDDLIPKRDVTGGQQLLFGVTDTTQSINKPTKDK*
Ga0134063_1004094513300010335Grasslands SoilAGESGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTETTNNPTKENQK*
Ga0134071_1053695913300010336Grasslands SoilRKEKLIRLDDLIPKQDVTGGRQLPLGVTDTTQTTNN*
Ga0126370_1033263213300010358Tropical Forest SoilRRKDKLIRLDDLIPKQDVKGGRQLLFGATETTRTSNPIKEK*
Ga0126376_1203860323300010359Tropical Forest SoilAGQSENQRPKRRKEKLIRLDDLIPKQDVKGGQQLLFGTTDTREETRNN*
Ga0126378_1124236113300010361Tropical Forest SoilSANQRPKRRKDTLIRLDDLVPKQDVKGGYQLLFGLTDATETIYNSTKES*
Ga0137382_1077797313300012200Vadose Zone SoilNQRPKRRKEKLIRLDDLIPKRDVTGGQQLLFGVTDTTQSINNPTKDK*
Ga0137376_1029618413300012208Vadose Zone SoilKDKLIRLDDLIPKQDVTGGHQLLFGVTDTTRAINNPTKEN*
Ga0137376_1081475723300012208Vadose Zone SoilAPTAGESGNQRPKRRKDKLIRLNDLIPKQDVTGGQRLLFGATDTTQSTNNPTKDK*
Ga0137378_1024972233300012210Vadose Zone SoilNQRPKRRKEKLIRLDDLIPKQDVTGGHHLLFGATDTTKTTNNPTKEN*
Ga0137378_1080192713300012210Vadose Zone SoilGESGNQRPKRRKGKLIRLDDLIPKQDVTGGHQLLFGVTDTTETTNQNKKEE*
Ga0137378_1114296013300012210Vadose Zone SoilLDDLIPKKDVTGGQQLLFGVTDTKQSINKPTKDK*
Ga0137377_1192769823300012211Vadose Zone SoilQRPKRRKEKLIRLDDLIPKQDVTGGHQLPFGATDTDTTQTTNN*
Ga0137370_1046160833300012285Vadose Zone SoilPARESENQRPKRRKDKSIRLDDLIPKQDVKGGHQLLFGVTDTTETTTKEN*
Ga0137371_1002229263300012356Vadose Zone SoilVPAGESENQRPKRRKDKSIRLDDLIPKQDIKGGHQLLFGVTDTTETTTKEN*
Ga0137371_1092325613300012356Vadose Zone SoilKRRKEKLIRLDDLIPKQDVTGGHSVLFGATDTTETTEN*
Ga0137385_1078578133300012359Vadose Zone SoilNQRPKRRKNKLIRLDDLIPKQDVTGGHHLLFGATDTTKTTNNPTKEN*
Ga0137390_1166750523300012363Vadose Zone SoilSGNQRPKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTQTTNNPTKENQK*
Ga0137396_1036976333300012918Vadose Zone SoilGESGNQRPKRRKDKVIRLDDLIPKQDVKGGHQLLFGATDAKQTLNNPTKET*
Ga0137407_1191548813300012930Vadose Zone SoilRKDKLIRLDDLIPKQDVTGGRQLLFGVTDKTQSTNNPTKDK*
Ga0126369_1037375633300012971Tropical Forest SoilKEKLIRLDDLIPKQDVKGGHQLLFGVTDTTETENNPTKENQK*
Ga0126369_1069468413300012971Tropical Forest SoilKRRKEKLIRLDDLIPKQDVKGGHQLLFGVTHTTQTTNNPKENQK*
Ga0134076_1020069013300012976Grasslands SoilKRRKDKLIRLDDLIPKQDVMGGHQLLFGATDTTETTNEPTKEN*
Ga0134087_1048961813300012977Grasslands SoilLIRLDDLIPKKDVTGGHQLLFGVSDTTQTKNNPTKEN*
Ga0134087_1081886333300012977Grasslands SoilLIRLDDLIPKKDVTGGQKLLFGVTDTRQSINKPTKDK*
Ga0164308_1045315433300012985SoilQRPKRRKDKLIRLNDLIPKQDVTGGHQLLFGVTDETQSTNKPKGH*
Ga0164304_1001725613300012986SoilNQRPKRRKEKVIRLDDLIPKQDVTGGHQLLFGATDTIQTNQTNQKEK*
Ga0164306_1144897223300012988SoilERLKHRKGKLIRLDDLIPKQDVKGGRQLFGTTDTIQTTNPRKEH*
Ga0134078_1003436023300014157Grasslands SoilSGNQRPKRRKDKLIRLDDLIPKRDVKGGHQLLFGVTDITKTTNNPAKENQK*
Ga0134078_1055749313300014157Grasslands SoilAGESGNGRPKHRRDKLIRLDDLIPKKDVKGGRQLLFGVTDTTQTTNPTKED*
Ga0137405_102851713300015053Vadose Zone SoilESQEIKGLSRRKAKLIRLDDLIPKQDVTGGQQLLFGVTDTIQTTNKPTKDK*
Ga0137418_1041843433300015241Vadose Zone SoilQRPKRSKEKLIRLDDLIPKQDVTGGRQLLFGVSDPTQTRNNPIKES*
Ga0132256_10040535513300015372Arabidopsis RhizosphereKDKLIRLDDLVPNQDVTGGQRLLFGVTDKTQSVNNPTKDK*
Ga0132257_10292755113300015373Arabidopsis RhizosphereKPKRRKDKLIRLNDLIPKQDVTGGQRLLFGATDTTQSTNNPTKDK*
Ga0132255_10124096713300015374Arabidopsis RhizosphereGNQRPKRRKDKLIRLNDLIPKQDVTGGRRLLFGVTDKTNNPAKDK*
Ga0132255_10423729123300015374Arabidopsis RhizosphereIRLDDLIPKQDVTGGHQLLFGVTDKTQSTNNPTRDK*
Ga0182036_1007702133300016270SoilVGESGNRRPKRKKEKFIRLDDLIPKKDVVGGRQLLFGATDATQTTNKPTSEN
Ga0182035_1006310413300016341SoilAGESGNQRLKRRKGKVIRLDDLIPKQDVTGGHQLLFGATDTIETLNNPTKKT
Ga0182035_1028182713300016341SoilRSKRRKDKLIRLDDLIPKQDVKGGRQLLFFATETTQTTNPTKEE
Ga0134083_1015936733300017659Grasslands SoilKRSKAKLIRLDDLIPKQDVTGGQQLLFGVTDTKQSINKPTKDK
Ga0134083_1025351813300017659Grasslands SoilKCAAGESEDQRPKRKKDKLICLGELIPKPDVKGGHQLLFGVNCTTETTTKEN
Ga0184604_1036031013300018000Groundwater SedimentEESGNKRRKRTRDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQTTNNPTNKTS
Ga0184608_1036030813300018028Groundwater SedimentLIRLDDLIPEKDVKGGRQLLFGVTDTAQTTNNPTNKTS
Ga0184640_1046841213300018074Groundwater SedimentQRPKRRKDKLIRLNDLIPKQDVTGGQQLLFGVTDKTQSTNNPTKDK
Ga0066655_1003183043300018431Grasslands SoilKRRKDKLIRLDDLIPKRDVTGGHQLLFGVTDTTETTNNPTKENQK
Ga0066662_1184213613300018468Grasslands SoilSGDQRPKRRKDKLIRLDDLIPKQDVKGGYQLLFGATDTTQTTNPTKEN
Ga0066669_1121868313300018482Grasslands SoilRPKRSKDKLIRLDDLIPKQDVKGGHQVLFGATDTTETETETTNN
Ga0066669_1178629213300018482Grasslands SoilGNQRPRRRKGKLIRLDDLIPKQDVTGGHQLLFGVTDTTETTNQNKKEEENGT
Ga0173479_1063360713300019362SoilKSTRRRESGNQRPKRRKDKLIRLDDLIPKKDVTGGHQLLFGVTDTTQSKNNPTKDK
Ga0193754_101264633300019872SoilPKRSKVKLIRLNDLIPNQDVTGGHQLLFGVTDKTQSTNNPTKDK
Ga0193723_111332913300019879SoilIRLDDLIPEKDVKGGRQLLFGVTDTAQTTNNPTNKTS
Ga0193712_113438723300019880SoilAKLIRLDDLIPKKDVTGGQQLLFGVTDPTQPINKPTKDK
Ga0193731_117777033300020001SoilKRRKDKLIRLNDLIPKQDVTGGHRLLFGVTDKTQSTNNPTKGK
Ga0193695_105627333300021418SoilGNQRPKRSKDKLIRLDDLIPKQDVTGGHQLLFGATDTKHTTNNPAKDK
Ga0222622_1058760423300022756Groundwater SedimentQRPKRKKAKLIRLDDLIPKQDVTGGQQLLFGASDTTQSINNPTKDK
Ga0193714_101055013300023058SoilKRRKEKLIRLDDLIPKQDVTGGRQLLFGVTDKTQSTNNPTKDK
Ga0207662_1077349413300025918Switchgrass RhizosphereKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS
Ga0207690_1001867563300025932Corn RhizosphereKRTRDKLIRLDDLIPEKDVKGGRQLLFGVTDTAQATKNPTNKTS
Ga0209469_101804113300026307SoilGESGDQRPKRRRDKLIRLDDLIPKQDVTGGYQLLFGATDTTQTTNPTKEN
Ga0209265_100665813300026308SoilNSPAGESGNQRPKRRKEELIRLDDLIPKQDVTGGRQLPLGVTDTTQTTNN
Ga0209472_115508013300026323SoilDKLIRLDDLIPKKDVKGGRQLLFGVTDTTQTTNPTKED
Ga0209375_110454823300026329SoilGNQRAKRRKEKLIRLDDLIPKRDVTGGQQLLFGVTDTTQSTNNPTKDK
Ga0209159_103698053300026343SoilESGDQRPKRRRDKLIRLDDLIPKQDVTGGYQLLFGATDTTQTTNPTKEN
Ga0209180_1079787823300027846Vadose Zone SoilSQRPKRSAKKLIRLDDLIPKQNVVGGRQLLFGASDPTQPTNPK
Ga0307296_1014901813300028819SoilAGESENQRPKRSKAKLIRLDDLIPKKDVTGGQQLLFGVTDPTQSINKPTKDK
Ga0307308_1022800533300028884SoilNQRPKRRKDKLIRLDDLIPKQDVMGGHQVLFGVTDTDTQQTNQNKKEE
Ga0307304_1053175433300028885SoilGKSEDQRPKRRKDKLIRLDDLVPNRDVTGGQRLLFGVTDKTQSANNPTKDK
Ga0138296_139531313300030923SoilGESGNQRPKRRKDKLIRLNDLIPKQDVTGGQRLLFGVTDKTRSTNNPTKDK
Ga0138303_122328513300030939SoilMREVAKRRKEKLIRLDDLIPKRDVTGGQQLLFGVTDTTQSINNPTKDK
Ga0075394_1000147913300030969SoilAGESGNQRPKRRKDKLIRLNDLIPKQDVKGGQQLLFGVTDKTQSTNNPTKDK
Ga0138301_174645033300031022SoilKDKLIRLNDLIPKQDVTGGQRLLFGVTDKTNNPTKDK
Ga0170822_1681831733300031122Forest SoilRRKGKLIRLNDLIPNQDVTGGHRLLFGVTDKTQSTNNPTKDK
Ga0170824_11228005113300031231Forest SoilMRPPESQDYQRPKRRKGKLIRLDDLIPKRDVTGGHQLLFGVTDTTETTNQNKKEE
Ga0170820_1721735213300031446Forest SoilQRPKRRKDKLIRLDDLIPKQDVKGGHQYLFGVTDRSEANNPTTET
Ga0170819_1633594023300031469Forest SoilSKAKLIRLDDLIPKKDVTGGQRLLFGVTDTRQSINNPTKDK
Ga0310915_1040207833300031573SoilGESGNQRLKRRKGKVIRLDDLIPKQDVTGGHQLLFGATDTIETLNNPTKKT
Ga0307480_101892413300031677Hardwood Forest SoilAGESENQRPKRSKAKLIRLDDLIPKQDVKGGQQLLFGVTDTTQSVNNPTKDK
Ga0307469_1014620513300031720Hardwood Forest SoilSENQRPKRRKDKLIRLDDLIPKKDVTGGQQLFGVTETTQSINNPTKDK
Ga0306921_1005983853300031912SoilESENQRPKRRKDKLIRLDDLIPKKDVTGGQQLLFGVTDATQSINNPTKDK
Ga0310912_1029444133300031941SoilNQRSKRRKDKLIRLDDLIPKQDVKGGRQLLFGATETTQTTNLTKEE
Ga0310885_1056227323300031943SoilPKRRKDKLIRLDDLVPKQDVTGGHQLLFGVTDKTNNPTKDK
Ga0310884_1019178013300031944SoilSGNQRPKRRKDKLIRLNDLISKQDVTGGQRLLFGVTDKTNNPTKDK
Ga0310910_1038796833300031946SoilRKLKREKGKLIRLDDLIPRKDVAGGHQLLFGATDATQTTNKPTSEN


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