Metagenome / Metatranscriptome Family F067568

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067568
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	103 residues
Representative Sequence	GIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ
Number of Associated Samples	104
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.59 %
% of genes near scaffold ends (potentially truncated)	39.20 %
% of genes from short scaffolds (< 2000 bps)	68.00 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (22.400 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.36% β-sheet: 20.93% Coil/Unstructured: 52.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00072	Response_reg	16.00
PF00158	Sigma54_activat	10.40
PF02954	HTH_8	8.80
PF00905	Transpeptidase	8.00
PF00912	Transgly	4.80
PF00849	PseudoU_synth_2	3.20
PF01425	Amidase	2.40
PF00672	HAMP	0.80
PF02738	MoCoBD_1	0.80
PF00293	NUDIX	0.80
PF01315	Ald_Xan_dh_C	0.80
PF03030	H_PPase	0.80
PF00576	Transthyretin	0.80
PF13520	AA_permease_2	0.80
PF17203	sCache_3_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	4.80
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	4.80
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	4.80
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	3.20
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	3.20
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	2.40
COG2351	5-hydroxyisourate hydrolase (purine catabolism), transthyretin-related family	Nucleotide transport and metabolism [F]	0.80
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.00 %
Unclassified	root	N/A	28.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	45.60 %
Unclassified	root	N/A	28.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.40 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	45.60 %
Unclassified	root	N/A	28.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	45.60 %
Unclassified	root	N/A	28.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	39.20 %
Unclassified	root	N/A	28.00 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.20 %
Unclassified	root	N/A	28.00 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.20 %
Unclassified	root	N/A	28.00 %
unclassified Polaromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.20 %
Unclassified	root	N/A	28.00 %
Polaromonas sp. CF318	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. CF318	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101739417	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101739847	Not Available	548	Open in IMG/M
3300000443\|F12B_12472859	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300000559\|F14TC_110099303	Not Available	656	Open in IMG/M
3300000956\|JGI10216J12902_102094525	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300003324\|soilH2_10065984	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300004114\|Ga0062593_102306908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	605	Open in IMG/M
3300005174\|Ga0066680_10028258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3146	Open in IMG/M
3300005177\|Ga0066690_10758788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300005180\|Ga0066685_10000039	All Organisms → cellular organisms → Bacteria	24232	Open in IMG/M
3300005330\|Ga0070690_100908697	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300005332\|Ga0066388_100374253	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2071	Open in IMG/M
3300005332\|Ga0066388_101912720	Not Available	1060	Open in IMG/M
3300005332\|Ga0066388_105254178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300005343\|Ga0070687_100744407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	689	Open in IMG/M
3300005363\|Ga0008090_10066039	Not Available	2460	Open in IMG/M
3300005445\|Ga0070708_100674558	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	973	Open in IMG/M
3300005445\|Ga0070708_101021044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300005467\|Ga0070706_101674594	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300005468\|Ga0070707_101232051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300005471\|Ga0070698_101217087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300005536\|Ga0070697_100355664	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300005545\|Ga0070695_100177183	Not Available	1508	Open in IMG/M
3300005552\|Ga0066701_10388665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300005554\|Ga0066661_10110438	Not Available	1653	Open in IMG/M
3300005554\|Ga0066661_10810576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300005555\|Ga0066692_10043799	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2454	Open in IMG/M
3300005556\|Ga0066707_10896632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300005561\|Ga0066699_10002718	All Organisms → cellular organisms → Bacteria → Proteobacteria	7008	Open in IMG/M
3300005713\|Ga0066905_102023526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → unclassified Polaromonas → Polaromonas sp. CF318	535	Open in IMG/M
3300005764\|Ga0066903_100365929	Not Available	2344	Open in IMG/M
3300005841\|Ga0068863_100206831	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300005983\|Ga0081540_1055153	Not Available	1937	Open in IMG/M
3300006032\|Ga0066696_10394611	Not Available	903	Open in IMG/M
3300006049\|Ga0075417_10451195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300006796\|Ga0066665_10530443	Not Available	960	Open in IMG/M
3300006854\|Ga0075425_100054217	All Organisms → cellular organisms → Bacteria	4490	Open in IMG/M
3300007255\|Ga0099791_10373585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300007258\|Ga0099793_10053362	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300009137\|Ga0066709_100083426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3827	Open in IMG/M
3300009137\|Ga0066709_101031432	Not Available	1206	Open in IMG/M
3300009147\|Ga0114129_10061564	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5245	Open in IMG/M
3300009162\|Ga0075423_11842903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300010081\|Ga0127457_1057461	Not Available	2118	Open in IMG/M
3300010089\|Ga0127454_1047130	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300010102\|Ga0127453_1038261	Not Available	1802	Open in IMG/M
3300010102\|Ga0127453_1052690	Not Available	974	Open in IMG/M
3300010106\|Ga0127472_1104482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	750	Open in IMG/M
3300010109\|Ga0127497_1130692	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2445	Open in IMG/M
3300010112\|Ga0127458_1093441	Not Available	1230	Open in IMG/M
3300010119\|Ga0127452_1007512	Not Available	1239	Open in IMG/M
3300010119\|Ga0127452_1020563	Not Available	984	Open in IMG/M
3300010119\|Ga0127452_1045242	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300010119\|Ga0127452_1063459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3087	Open in IMG/M
3300010133\|Ga0127459_1031378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2458	Open in IMG/M
3300010133\|Ga0127459_1113037	Not Available	943	Open in IMG/M
3300010303\|Ga0134082_10172331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	880	Open in IMG/M
3300010336\|Ga0134071_10000386	All Organisms → cellular organisms → Bacteria	14516	Open in IMG/M
3300010361\|Ga0126378_12388035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300010362\|Ga0126377_10178596	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300010366\|Ga0126379_11793887	Not Available	718	Open in IMG/M
3300010397\|Ga0134124_10024284	All Organisms → cellular organisms → Bacteria	4986	Open in IMG/M
3300012202\|Ga0137363_10520473	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300012205\|Ga0137362_10085974	Not Available	2631	Open in IMG/M
3300012205\|Ga0137362_10256959	Not Available	1509	Open in IMG/M
3300012208\|Ga0137376_10131445	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300012361\|Ga0137360_10635978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300012371\|Ga0134022_1091338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300012372\|Ga0134037_1030478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	682	Open in IMG/M
3300012376\|Ga0134032_1040220	Not Available	977	Open in IMG/M
3300012393\|Ga0134052_1066445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3328	Open in IMG/M
3300012393\|Ga0134052_1284380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300012396\|Ga0134057_1326229	Not Available	1073	Open in IMG/M
3300012401\|Ga0134055_1026154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300012402\|Ga0134059_1066599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300012402\|Ga0134059_1302204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300012582\|Ga0137358_10071694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2326	Open in IMG/M
3300012685\|Ga0137397_11174063	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300012923\|Ga0137359_11641983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300012929\|Ga0137404_10003446	All Organisms → cellular organisms → Bacteria	10553	Open in IMG/M
3300012930\|Ga0137407_10180166	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300012944\|Ga0137410_10171209	Not Available	1667	Open in IMG/M
3300012971\|Ga0126369_10279281	Not Available	1660	Open in IMG/M
3300012976\|Ga0134076_10000286	All Organisms → cellular organisms → Bacteria	12515	Open in IMG/M
3300012977\|Ga0134087_10501752	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300014154\|Ga0134075_10000250	All Organisms → cellular organisms → Bacteria	15508	Open in IMG/M
3300014969\|Ga0157376_12551826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300015241\|Ga0137418_10006178	All Organisms → cellular organisms → Bacteria	11019	Open in IMG/M
3300015245\|Ga0137409_10006914	All Organisms → cellular organisms → Bacteria	11708	Open in IMG/M
3300017659\|Ga0134083_10000505	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	10093	Open in IMG/M
3300018032\|Ga0187788_10201096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	772	Open in IMG/M
3300018431\|Ga0066655_10087135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1716	Open in IMG/M
3300018433\|Ga0066667_10046376	Not Available	2587	Open in IMG/M
3300019789\|Ga0137408_1288166	All Organisms → cellular organisms → Bacteria	6847	Open in IMG/M
3300019789\|Ga0137408_1440414	Not Available	5010	Open in IMG/M
3300021151\|Ga0179584_1502743	Not Available	2174	Open in IMG/M
3300025910\|Ga0207684_10011026	All Organisms → cellular organisms → Bacteria → Proteobacteria	7921	Open in IMG/M
3300025918\|Ga0207662_10863046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300025922\|Ga0207646_10099154	Not Available	2611	Open in IMG/M
3300025923\|Ga0207681_11039333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300025930\|Ga0207701_10390357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1200	Open in IMG/M
3300025933\|Ga0207706_10598221	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300025937\|Ga0207669_10504193	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300025942\|Ga0207689_11420786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300026309\|Ga0209055_1003534	All Organisms → cellular organisms → Bacteria	9518	Open in IMG/M
3300026324\|Ga0209470_1000503	All Organisms → cellular organisms → Bacteria	30947	Open in IMG/M
3300026326\|Ga0209801_1054988	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300026335\|Ga0209804_1176670	Not Available	927	Open in IMG/M
3300026532\|Ga0209160_1020824	All Organisms → cellular organisms → Bacteria	4391	Open in IMG/M
3300026536\|Ga0209058_1000067	All Organisms → cellular organisms → Bacteria	72565	Open in IMG/M
3300026536\|Ga0209058_1313198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300027903\|Ga0209488_10047918	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3141	Open in IMG/M
3300028792\|Ga0307504_10032791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1387	Open in IMG/M
3300028792\|Ga0307504_10183079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300031198\|Ga0307500_10058695	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300031720\|Ga0307469_10138311	Not Available	1798	Open in IMG/M
3300031720\|Ga0307469_10478854	Not Available	1085	Open in IMG/M
3300031720\|Ga0307469_12204721	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300031740\|Ga0307468_100072236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1922	Open in IMG/M
3300031892\|Ga0310893_10086651	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300032180\|Ga0307471_101095829	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032180\|Ga0307471_101321277	Not Available	883	Open in IMG/M
3300032180\|Ga0307471_102807827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.20%
Host-Associated	Host-Associated	8.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.20%
Plants	Host-Associated → Plants	8.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.20%
Loam	Environmental → Terrestrial → Soil → Loam	15.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.80%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	22.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010089	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017394173	3300000364	Soil	MLTRTTLATDWFIGEGSVRTLAGLVAVILMATIVATPAWARVVRMQTVVNLADRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGIQVLQDVVVLATVATDXDDDXEAPDNXRDX*
INPhiseqgaiiFebDRAFT_1017398472	3300000364	Soil	LGESFLSLARAMLTRATLTADWLIGEGTVRTFAGLVAVMLMAMIVATPAWARVVRMQTVVNLADRSDPAVKRAVKEAFDTSLRGAVAMGGFARIRVDGIQVLKDVVVLATVA
F12B_124728591	3300000443	Soil	LRALAAMTGMTLVLLMGAYVSPASARVVRMETSVNLTDRSDPAVKQALKETFDTTMRGAVAMGFTRIRVDGFQVRQDTVVLATVXXXEDDDDDTSDNTRVQ*
F14TC_1100993031	3300000559	Soil	MLTRTTLAADWFIGEGTVRTLARLVAGMLMAMIVATPAWARIVRMQTVVNLTDRSDPSVKRAVKEAFDTSLRGAVAMGFARIRVDGIQVLQDVVVLATVATDEDDDDEA
JGI10216J12902_1020945252	3300000956	Soil	VRVLAGLVAAILAAMALTVQPASARVVRIETAVSLTDRSDPAVKQALMEAFQTAMRGGVAMGLSTIRVDGIQLLHDSVVLATIATDEDDDDEAPHNARDQ*
soilH2_100659842	3300003324	Sugarcane Root And Bulk Soil	VRVVGGMATLVMLMGACVTPASARAVRMETSVDLTDRSDPAVKQALKDAFDTSMRGAVAMGFTHIRVDGFQPRQDTVVLATVATDEDDDDEAPDNTRVQ*
Ga0062593_1023069081	3300004114	Soil	VRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0066680_100282581	3300005174	Soil	VRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0066690_107587881	3300005177	Soil	MRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0066685_1000003917	3300005180	Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0070690_1009086971	3300005330	Switchgrass Rhizosphere	MLTRTTLSSRPVYREGTVRTLAGLVAALLMAAVVATPALARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLQDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0066388_1003742531	3300005332	Tropical Forest Soil	MDREGTVRVQAGLVAAVMMTTFVTVAPAWARSVRMKTVVNLTDRSDPAVKAALREAFDTSLRGAVAMGFSRIRVDAIEVLQDTVVLATVATDGDDDDEAPENTRDQ*
Ga0066388_1019127201	3300005332	Tropical Forest Soil	LMALGLFAAPPAWARVVRMQTVVNLTDRSEPAVKQAVKEAFDTLLRGAVAMGFAQIRVDGIQILQDSVVLATVATDEDDDEGSDNARDQ*
Ga0066388_1052541782	3300005332	Tropical Forest Soil	VRALAGMAATTLVMLMGAYVTPASARVVRMETSVNLTDRSDPAVKQALKDAFDTSMRGAVAMGFTHIRVDGFQVRQDTVVLATVATDEDDDDEAPDNTRVQ*
Ga0070687_1007444072	3300005343	Switchgrass Rhizosphere	MLTRTTLSSRLVHREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0008090_100660391	3300005363	Tropical Rainforest Soil	VRKIAGLGLLLMLAGSIGVPPAWARVVRMQTVVNFTDRSDPAVKQAVKEAFDMSLRGAVAMGFAQIRVDGIQILQDSVVLATVATDEDDVDEGPDNARDQ*
Ga0070708_1006745583	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRVYAGLAAAVVVMAGLSVSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0070708_1010210441	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLQDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0070706_1016745941	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AGLSVSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0070707_1012320512	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLTRTTLSSRPVYREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0070698_1012170871	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GLSVSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0070697_1003556642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VRVYAGLAAAVVVMAGLSMSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0070695_1001771831	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLAGLVAALLMAAVVATPALARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0066701_103886651	3300005552	Soil	MAGLSMSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0066661_101104381	3300005554	Soil	MAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0066661_108105761	3300005554	Soil	MRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVA
Ga0066692_100437992	3300005555	Soil	MRRGTSGTGDAHPGGTSEKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0066707_108966322	3300005556	Soil	GTVRALAGLVAALVIATVVPVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0066699_100027181	3300005561	Soil	MAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDANEAPDNTRDQ*
Ga0066905_1020235261	3300005713	Tropical Forest Soil	VRVLAGLVAAVMMATVVTVAPAWARIVRLKTVVSLTDRSDPAVKAALREAFDTSLRGAIAMGFARIRVDAIRVLQDTVVVLATVATDGDDDDQALESTRDQ*
Ga0066903_1003659292	3300005764	Tropical Forest Soil	VRKIAGLGLLLMLAGSIGVPPAWARVVRMQTVVNFTDRSDPAVKQAVKEAFDMSLRGAVSMGFAQIRVDGIQILQDSVVLATVATDEDDVDEGPDNARDQ*
Ga0068863_1002068311	3300005841	Switchgrass Rhizosphere	MGVAMRRFAGLAAGLLMATFVAVPPAWARVVRMQTVVSLADRSDPAIKRAVKEAFDTSLRGAVAMGFGRIRVDGIEVLQNSLVLATVATDEDDD
Ga0081540_10551531	3300005983	Tabebuia Heterophylla Rhizosphere	VRVFAGLIAAVSVTTALSVSPAWARTVRFETAVNLTDRSEPAIKQALMEAFDTSMRGAVAMGLSHIRVDRIQVLQDAVVLAMIATDEDDDDQAPDNARDQ*
Ga0066696_103946113	3300006032	Soil	VVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRLDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0075417_104511952	3300006049	Populus Rhizosphere	VRILAGLVALGMATIIAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0066665_105304433	3300006796	Soil	TPIADLHQREGTVRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0075425_1000542174	3300006854	Populus Rhizosphere	VRVYAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0099791_103735852	3300007255	Vadose Zone Soil	MRPGPGTTDAHPGDTSEDLVRSGGIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0099793_100533622	3300007258	Vadose Zone Soil	MKREGTVRVLAGLVAAALVMTVLSVSAASARVVRMETSVSLTDRSDPAIKQALMEAFDTSMRGAVAMGFSHIRVDGIQVLPNVVVLDDRNGRGRR*
Ga0066709_1000834262	3300009137	Grasslands Soil	MLTRATPIADLHQREGTVRVFAGLAAAVVVMPGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0066709_1010314321	3300009137	Grasslands Soil	MATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0114129_100615642	3300009147	Populus Rhizosphere	VAAILAAMALTVQPASARVVRIETAVSLTDRSDPAVKQALMEAFQTAMRGAVAMGLSTIRVDGIQLLHDSVVLATIATDENDDDEAPDNARDQ*
Ga0075423_118429031	3300009162	Populus Rhizosphere	VAAILAAMALAVQPASARVVRIETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0127457_10574611	3300010081	Grasslands Soil	LSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127454_10471302	3300010089	Grasslands Soil	GGIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0127453_10382612	3300010102	Grasslands Soil	VRILAGLVALGTATIVAVSPAWARVVRMQTVVSLTDRSDPAAKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0127453_10526901	3300010102	Grasslands Soil	KLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127472_11044821	3300010106	Grasslands Soil	REGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0127497_11306924	3300010109	Grasslands Soil	SRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127458_10934413	3300010112	Grasslands Soil	EKLSRSGGTVRSLAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127452_10075121	3300010119	Grasslands Soil	MATIIAVSPAWARVLRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0127452_10205631	3300010119	Grasslands Soil	LHQREGTVRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0127452_10452421	3300010119	Grasslands Soil	REGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVVLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0127452_10634594	3300010119	Grasslands Soil	MRRGTSGTGDAHPGGTSEKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127459_10313784	3300010133	Grasslands Soil	EKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0127459_11130371	3300010133	Grasslands Soil	IGRGIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0134082_101723313	3300010303	Grasslands Soil	MLTRATPSEEFGDGEGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0134071_100003869	3300010336	Grasslands Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0126376_112322863	3300010359	Tropical Forest Soil	AWARTVRFETAVNLTDRSEPAIKQALMEAFDTSMRGAVAMGLPHIRVDRIQVLQGSVVLAMIATDEDDDDQAPDNARDQ*
Ga0126378_123880351	3300010361	Tropical Forest Soil	TVRKIAGLGLLLMLAGSIGIPPAWARVVRMQTVVNFTDRSDPAVKQAVKEAFDMSLRGAVAMGFAQIRVDGIQILQDSVVLATVATDEDDVDEGPDNARDQ*
Ga0126377_101785962	3300010362	Tropical Forest Soil	MLTRASRLTGIHRLEGTVRVLAGLVAAVMMTTVVTVAPAWARIVRMKTVVTLTDRSDPAIKAAVREAFDTSLHGAIAMGFSRILVGAIQVLQGTVVLATVATDGNDDDDEAPENTRDQ*
Ga0126379_117938872	3300010366	Tropical Forest Soil	LGLLLMLAGSIGVPPAWARVVRMQTVVNFTDRSDPAVKQAVKEAFDMSLRGAVAMGFAQIRVDRIQILQDSVVLATVATDEDDVDEGPDNARDQ*
Ga0134124_100242845	3300010397	Terrestrial Soil	LVVLLHALARAMLTRTTLSSRLVHREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ*
Ga0137363_105204732	3300012202	Vadose Zone Soil	MLTGGDTSYIQFIREGTVRVLAGFVVAAVAMTVLCVAPAAARVVRMETAVSLTDRSDPAIKQALMEAFETSMRGAIAMGLPRIRVDGVQVLPDHVVLAMIATDEDDDDAPDNARDQ*
Ga0137362_100859742	3300012205	Vadose Zone Soil	MLTGGDTSYIQFIREGTVRVLAGFVVAAVAMTVLCVAPAAARVVRMETAVSLTDRSDPAVKQALMEAFETSMRGAIAMGLPRIRVDGVQVLPDHVVLAMIATDEDDDDAPDNARDQ*
Ga0137362_102569593	3300012205	Vadose Zone Soil	MLTRAAPEKHLIAREGNMRVAAGLMAALVMATVAVSPASARVVHMQTAVSLTDRSDPAVKLALKEAFDTSLPGAIAMGFSRIRVDAIQVLQDTVVLATVATDEGDDDEAPDNARDQ*
Ga0137376_101314452	3300012208	Vadose Zone Soil	MLTRATPIADLHQREGTVRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0137360_106359783	3300012361	Vadose Zone Soil	RVYAGLAAAVVVMAGLSVSTASARVVRMETAVSLTDRSDPAIKQALMEAFETSMRGAIAMGLPRIRVDGVQVLPDHVVLAMIATDEDDDDAPDNARDQ*
Ga0134022_10913381	3300012371	Grasslands Soil	DGEGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0134037_10304781	3300012372	Grasslands Soil	EEFGDREGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0134032_10402201	3300012376	Grasslands Soil	FGDREGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0134052_10664451	3300012393	Grasslands Soil	EKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0134052_12843802	3300012393	Grasslands Soil	SIGRGIVRILAGLVALGTATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0134057_13262293	3300012396	Grasslands Soil	MLTRATPSEEFGDREGTMRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ*
Ga0134055_10261541	3300012401	Grasslands Soil	DLHQREGTVRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRLDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ*
Ga0134059_10665991	3300012402	Grasslands Soil	KLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0134059_13022042	3300012402	Grasslands Soil	GIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLAMVATDGDDDDEAPENARDQ*
Ga0137358_100716941	3300012582	Vadose Zone Soil	MLTRAAPEKHLIAREGNMRVAAGLMAALVMATVAVSPASARVVHMQTVVSLTDRSDPAVKLALKEAFDTSLPGAIAMGFSRIRVDAIQVLQDTVVLATVATDEGDDDEAPDNAR
Ga0137397_111740632	3300012685	Vadose Zone Soil	GIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0137394_103353341	3300012922	Vadose Zone Soil	ARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0137359_116419832	3300012923	Vadose Zone Soil	MLTRTTLAADWLIGEGTVRTLAGLGAVMLVAMVVATPGWARVVRMQTVVNLADRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGIQVLQDVVVLATVATDDDEAPDNTRDQ*
Ga0137404_100034463	3300012929	Vadose Zone Soil	MATIVAVSPAWARVVRIQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0137407_101801662	3300012930	Vadose Zone Soil	MRPGPGTTDAHPGDTSEDLVRSGGIVRILAGLVALGMATIVAVSPAWARVVRIQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0137410_101712092	3300012944	Vadose Zone Soil	MATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0126369_102792812	3300012971	Tropical Forest Soil	LGLLLMLAGSIGVPPAWARVVRMQTVVNFTDRSDPAVKQAVKEAFDMSLRGAVAMGFAQIRVDGIQILQDSVVLATVATDEDDVDEGPDNARDQ*
Ga0134076_1000028611	3300012976	Grasslands Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0134087_105017522	3300012977	Grasslands Soil	MRRGTSGTGDAHPGGTSEKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATYEDDEDEAPDNVRNQ*
Ga0134075_100002508	3300014154	Grasslands Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ*
Ga0157376_125518261	3300014969	Miscanthus Rhizosphere	MLTRTTLSSRLVHREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLAT
Ga0137418_100061787	3300015241	Vadose Zone Soil	MKREGTVRVLAGLVAAALVMTVLSVSAASARVVRMETSVSLTDRSDPAIKQALMEAFDTSMRGAVAMGFSHIRVDGIQVLPNVVVLATIATDENDDDEAPDNTRDQ*
Ga0137409_100069147	3300015245	Vadose Zone Soil	MATIVAVSPAWARVARTQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDGDDDDEAPENARDQ*
Ga0134083_100005052	3300017659	Grasslands Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVYRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ
Ga0187788_102010962	3300018032	Tropical Peatland	VRRFVGLVAASSMAVLVAVVPAWARVVRMQTVVTLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRIDGIQVLPDSVVVATDEDDDDASPDNTREQ
Ga0066655_100871353	3300018431	Grasslands Soil	MRRGTSGTGDAHPGGTSEKLSRSGGTVRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ
Ga0066667_100463763	3300018433	Grasslands Soil	MRVLAGLVAALAMATVVAVSPASARVVRMQTVVGLTDRSDPAIKQAVREAFDTSLRGAVAMGFSRIQVDAIQVLQDTVVLATVATDGDDDDEAPDNARDQ
Ga0137408_12881663	3300019789	Vadose Zone Soil	MLTGGDTSYIQFIREGTVRVLAGFVVAAVAMTVLCVAPAAARVVRMETAVSLTDRSDPAIKQALMEAFETSMRGAIAMGLPRIRVDGVQVLPDHVVLAMIATDEDDDDAPDNARDQ
Ga0137408_14404148	3300019789	Vadose Zone Soil	MTVLCVAPAAARVVRMETAVSLTDRSDPAIKQALMEAFETSMRGAIAMGLPRIRVDGVQVLPDHVVLAMIATDEDDDDAPDNARDQ
Ga0179584_15027431	3300021151	Vadose Zone Soil	LIAREGNMRVAAGLMAALVMATVAVSPASARVVHMQTVVSLTDRSDPAVKLALKEAFDTSLGGAIAMGFSRIRVDAIQVLQDTVVLATVATDEGDDDEAPDNARDQ
Ga0207684_100110267	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VRVYAGLAAVVVVMAGLSVSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ
Ga0207662_108630461	3300025918	Switchgrass Rhizosphere	RAMLTRTTLSSRLVHREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ
Ga0207646_100991543	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRVYAGLAAAVVVMAGLSVSTASARVVRMETAVSLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ
Ga0207681_110393332	3300025923	Switchgrass Rhizosphere	LTRTTLSSRLVHREGTVRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ
Ga0207701_103903572	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLAGLVAALLMAAVVATPALARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ
Ga0207706_105982212	3300025933	Corn Rhizosphere	VRTLAGLVAALLMAAVVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ
Ga0207669_105041932	3300025937	Miscanthus Rhizosphere	MLTRTTLAADWLIGEGTVRTLAGLVAGMLMAMIVAPPAWARIVRMQTVVNLSDRSDPAVKRAAKEAFDTSLRGAAVAMGFARIRVDGIQVLQDVVVLATVATDEDDDDEAPDNTR
Ga0207689_114207861	3300025942	Miscanthus Rhizosphere	VVATPAVARVVRMQTVVNLTDRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGFEVLRDVVVLATVATDEDDEDEAPDNTRDQ
Ga0209055_10035347	3300026309	Soil	VRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ
Ga0209470_100050317	3300026324	Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ
Ga0209801_10549881	3300026326	Soil	VRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATD
Ga0209804_11766701	3300026335	Soil	LHQREGTVRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ
Ga0209160_10208245	3300026532	Soil	VRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRVDGIQVLQDAVVLAMIATDEDDANEAPDNTRDQ
Ga0209058_100006753	3300026536	Soil	VRALAGLVAALVIATVVAVLPVSARVVRMQTVVNLVDRSDPAVKQALREAFDTPLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDDEDEAPDNVRNQ
Ga0209058_13131981	3300026536	Soil	VRVFAGLAAAVVVMAGLSVSAASARVVRMETAISLTDRSDPAVKQALMEAFDTSMRGAVAMGLPHIRLDGIQVLQDAVVLAMIATDEDDDNEAPDNTRDQ
Ga0209488_100479182	3300027903	Vadose Zone Soil	VRALAGLGAALLLTLTLVSPASARVVRMETVVSLTDRSDPAVKQALMEAFDTSMRGAVAMGFSRIRVDGIEVLPNVVVLATIATDEDDDDEALDPARDQ
Ga0307504_100327912	3300028792	Soil	VRALAGLVAALLVTITSISPASARVVRMETVVSLTDRSDPAVKQALMEAFDTSMRGAVAMGFSRIRVDGIQVLPNVVVLATIATDEDDDDEALDPARDQ
Ga0307504_101830791	3300028792	Soil	MRALAGLVAALGMAMTLVVSPAWARVVRMQTVVNLTDRSDPAVKQAVKEAFDTSLRGAVAMGFARIRVDGIQVFQDSLVLATVATDEGDD
Ga0307500_100586952	3300031198	Soil	MLTRTTLAAGWFIGEGIVRTLAGLVAVMLMAMIVATPAWARVVRMQTVVNLADRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGIQVLQDVVVLATVATDEDDDD
Ga0307469_101383111	3300031720	Hardwood Forest Soil	VALGMATIVAVSPAWARVVRMQTVVSLTDRSEPAVKQALREAFDTSLRGAAAMGFSRIRVDAIQVLQDTVILATVATDGDNDDEAPENTRDQ
Ga0307469_104788541	3300031720	Hardwood Forest Soil	MRILVGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLAMVATDGDDDDEGS
Ga0307469_122047212	3300031720	Hardwood Forest Soil	MAGLVAALLVMATVVAVSPASARVVRMQTVVNLTDRSDPAVKQAVREAFDTSMRGAVAMGFSHIRVDAIQVLQDTVVLATVATDEDDEDEAPDNARNQ
Ga0307468_1000722363	3300031740	Hardwood Forest Soil	VRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLAMVATDGDDDDEGS
Ga0310893_100866511	3300031892	Soil	LRALAAMAGMTLVLLMGAYVSPALARVVRMETSVNLTDRSDPAVKQALKEAFDTSMRGAVAMGFTRIRVDGYQVRQDTVVLATVATDEDDDDE
Ga0307471_1010958291	3300032180	Hardwood Forest Soil	LGESFLSLARAMLTRATLTADWLIGEGTVRTFTGLVTGDVDGDDRRHARLGSRRPQQTVVNLADRSDPAVKRAVKEAFDTSLRGAVAMGFARIRVDGIQVLQDVVVLATVATDE
Ga0307471_1013212773	3300032180	Hardwood Forest Soil	WGQNWRNTVRRLAGLVALLVVATVVSASPAWAREVRMQTQVSLNDRSEPAVKQALREAFDTCLRGAVAMGFSRIRVDAIQVLQDTVVLATVATDEDHDDEAPENARDQ
Ga0307471_1028078271	3300032180	Hardwood Forest Soil	MRPRPGTTDAHPGGTSEDLIDRGGIVRILAGLVALGMATIVAVSPAWARVVRMQTVVSLTDRSDPAVKQALREAFDTSLRGAVAMGFSRIRVDAIQVLQDTVVLAMVATDGDDDDEAPENARDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067568

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences