NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F067553

Metagenome Family F067553

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067553
Family Type Metagenome
Number of Sequences 125
Average Sequence Length 47 residues
Representative Sequence MTTLPEGLDPTIRTREIVFEADVSLVTPFLKLATVSRGGAGHMTF
Number of Associated Samples 98
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 96.80 %
% of genes near scaffold ends (potentially truncated) 93.60 %
% of genes from short scaffolds (< 2000 bps) 89.60 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(24.000 % of family members)
Environment Ontology (ENVO) Unclassified
(32.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.800 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00578AhpC-TSA 52.80
PF02627CMD 4.00
PF03781FGE-sulfatase 1.60
PF07681DoxX 1.60
PF02566OsmC 1.60
PF10048DUF2282 1.60
PF01327Pep_deformylase 1.60
PF16925TetR_C_13 0.80
PF00561Abhydrolase_1 0.80
PF00202Aminotran_3 0.80
PF07883Cupin_2 0.80
PF08241Methyltransf_11 0.80
PF01192RNA_pol_Rpb6 0.80
PF11376DUF3179 0.80
PF03453MoeA_N 0.80
PF04909Amidohydro_2 0.80
PF02730AFOR_N 0.80
PF00528BPD_transp_1 0.80
PF01522Polysacc_deac_1 0.80
PF00903Glyoxalase 0.80
PF11412DsbC 0.80
PF04055Radical_SAM 0.80
PF06508QueC 0.80
PF01436NHL 0.80
PF00496SBP_bac_5 0.80
PF03401TctC 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 4.00
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 4.00
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.60
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 1.60
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.60
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 1.60
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 1.60
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 1.60
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.80
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.80
COG2414Aldehyde:ferredoxin oxidoreductaseEnergy production and conversion [C] 0.80
COG1758DNA-directed RNA polymerase, subunit K/omegaTranscription [K] 0.80
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.80
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.80
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.80
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.80
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.80
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.80
COG0303Molybdopterin Mo-transferase (molybdopterin biosynthesis)Coenzyme transport and metabolism [H] 0.80
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.80
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.80
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.00 %
UnclassifiedrootN/A12.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002122|C687J26623_10076062All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300005332|Ga0066388_103320415All Organisms → cellular organisms → Bacteria → Proteobacteria822Open in IMG/M
3300005332|Ga0066388_105114835All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300005445|Ga0070708_101442238Not Available642Open in IMG/M
3300005450|Ga0066682_10887007All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005468|Ga0070707_100952309All Organisms → cellular organisms → Bacteria → Proteobacteria823Open in IMG/M
3300005471|Ga0070698_100008465All Organisms → cellular organisms → Bacteria11112Open in IMG/M
3300005529|Ga0070741_10441799All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300005575|Ga0066702_10559622All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium690Open in IMG/M
3300005577|Ga0068857_101403727All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300005598|Ga0066706_10374456All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300005764|Ga0066903_106317155All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005764|Ga0066903_106667287Not Available601Open in IMG/M
3300005764|Ga0066903_108793562Not Available513Open in IMG/M
3300005981|Ga0081538_10128923Not Available1194Open in IMG/M
3300006031|Ga0066651_10738421All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006046|Ga0066652_101223135All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300006047|Ga0075024_100612104All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300006049|Ga0075417_10631714Not Available546Open in IMG/M
3300006058|Ga0075432_10376158All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria608Open in IMG/M
3300006797|Ga0066659_10816037All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla773Open in IMG/M
3300006844|Ga0075428_100357338All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300006854|Ga0075425_100539998All Organisms → cellular organisms → Bacteria1342Open in IMG/M
3300006854|Ga0075425_101380553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium797Open in IMG/M
3300006871|Ga0075434_102535464All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300007004|Ga0079218_13321238All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300007076|Ga0075435_100597323All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300009012|Ga0066710_104757193All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300009038|Ga0099829_10296940All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300009038|Ga0099829_11609125All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300009088|Ga0099830_11006977All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria690Open in IMG/M
3300009088|Ga0099830_11266836All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300009089|Ga0099828_10237007All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1634Open in IMG/M
3300009089|Ga0099828_11999388All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300009090|Ga0099827_10365254All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300009143|Ga0099792_10835500All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300009147|Ga0114129_13353017All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300009795|Ga0105059_1045900All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300009809|Ga0105089_1101256All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300009810|Ga0105088_1023613All Organisms → cellular organisms → Bacteria → Proteobacteria971Open in IMG/M
3300009817|Ga0105062_1089669All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300009819|Ga0105087_1051171All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300009821|Ga0105064_1118384All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300009837|Ga0105058_1148579All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010029|Ga0105074_1066299All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300010043|Ga0126380_11265333All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300010043|Ga0126380_11986541Not Available532Open in IMG/M
3300010043|Ga0126380_12010589Not Available529Open in IMG/M
3300010047|Ga0126382_10477582All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300010047|Ga0126382_11422667All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300010358|Ga0126370_10383445All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300010359|Ga0126376_10633664All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300010359|Ga0126376_13288618All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300010362|Ga0126377_10740470All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300010362|Ga0126377_11405349Not Available771Open in IMG/M
3300010362|Ga0126377_11828583Not Available683Open in IMG/M
3300010362|Ga0126377_12940227Not Available550Open in IMG/M
3300010366|Ga0126379_11315217All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300011270|Ga0137391_10956602All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium698Open in IMG/M
3300012189|Ga0137388_10158436All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300012189|Ga0137388_10195643All Organisms → cellular organisms → Bacteria1820Open in IMG/M
3300012189|Ga0137388_11216765Not Available691Open in IMG/M
3300012203|Ga0137399_10724622All Organisms → cellular organisms → Bacteria → Proteobacteria837Open in IMG/M
3300012353|Ga0137367_11116773All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300012355|Ga0137369_11058719All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300012532|Ga0137373_10220517All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300012685|Ga0137397_11121811All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012918|Ga0137396_10034197All Organisms → cellular organisms → Bacteria3388Open in IMG/M
3300012918|Ga0137396_10222932All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300012922|Ga0137394_10205550All Organisms → cellular organisms → Bacteria → Proteobacteria1682Open in IMG/M
3300012923|Ga0137359_10414085All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300012923|Ga0137359_11222508All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300012929|Ga0137404_10396634All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1216Open in IMG/M
3300012948|Ga0126375_11041200All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300012971|Ga0126369_10066268All Organisms → cellular organisms → Bacteria → Proteobacteria3148Open in IMG/M
3300012972|Ga0134077_10090131Not Available1177Open in IMG/M
3300012972|Ga0134077_10586634All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012975|Ga0134110_10383726All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300014154|Ga0134075_10286249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales716Open in IMG/M
3300014154|Ga0134075_10528501All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300014254|Ga0075312_1057893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales748Open in IMG/M
3300014262|Ga0075301_1076225All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium691Open in IMG/M
3300014873|Ga0180066_1113263All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300014881|Ga0180094_1164833All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300015241|Ga0137418_10041099All Organisms → cellular organisms → Bacteria → Proteobacteria4264Open in IMG/M
3300015241|Ga0137418_10889070All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300015264|Ga0137403_10032197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5533Open in IMG/M
3300017659|Ga0134083_10022942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2219Open in IMG/M
3300017659|Ga0134083_10487379All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300018059|Ga0184615_10327978All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium850Open in IMG/M
3300018078|Ga0184612_10626402All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300019458|Ga0187892_10216065All Organisms → cellular organisms → Bacteria → Proteobacteria1011Open in IMG/M
3300019789|Ga0137408_1373542All Organisms → cellular organisms → Bacteria4654Open in IMG/M
3300021051|Ga0206224_1011200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales995Open in IMG/M
3300021073|Ga0210378_10301807All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300025318|Ga0209519_10702409All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300025324|Ga0209640_10169813All Organisms → cellular organisms → Bacteria1862Open in IMG/M
3300025885|Ga0207653_10405786All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300025910|Ga0207684_10491345All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla1052Open in IMG/M
3300026296|Ga0209235_1040010All Organisms → cellular organisms → Bacteria → Proteobacteria2343Open in IMG/M
3300026313|Ga0209761_1180935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria956Open in IMG/M
3300026326|Ga0209801_1311062All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026328|Ga0209802_1013336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales4729Open in IMG/M
3300026523|Ga0209808_1055163All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1796Open in IMG/M
3300026550|Ga0209474_10764655All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300026550|Ga0209474_10766532All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300027032|Ga0209877_1018394All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300027616|Ga0209106_1104268All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300027646|Ga0209466_1082081Not Available651Open in IMG/M
3300027650|Ga0256866_1092207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Enhydrobacter → Enhydrobacter aerosaccus815Open in IMG/M
3300027862|Ga0209701_10563077All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria610Open in IMG/M
3300027875|Ga0209283_10751856All Organisms → cellular organisms → Bacteria604Open in IMG/M
(restricted) 3300028043|Ga0233417_10119329All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300028536|Ga0137415_10388105All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300030006|Ga0299907_10182208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1735Open in IMG/M
3300030006|Ga0299907_10594095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales862Open in IMG/M
3300030620|Ga0302046_10045314All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3581Open in IMG/M
3300031548|Ga0307408_100123704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2008Open in IMG/M
3300031720|Ga0307469_11237653Not Available707Open in IMG/M
3300031720|Ga0307469_11842249Not Available585Open in IMG/M
3300032005|Ga0307411_10633757All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300032005|Ga0307411_12102811All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300032261|Ga0306920_100404621All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2030Open in IMG/M
3300032261|Ga0306920_100489241All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1826Open in IMG/M
3300034178|Ga0364934_0251545All Organisms → cellular organisms → Bacteria670Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil24.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.80%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand7.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.40%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.40%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.60%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.60%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.60%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.80%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.80%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.80%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.80%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.80%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.80%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002122Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009819Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014262Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1EnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018059Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021051Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos A1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027032Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
C687J26623_1007606213300002122SoilVTAAVPDGLDPRIQTREIVFEADVSVVTPFLKLATVSRGGAGHMT
Ga0066388_10332041533300005332Tropical Forest SoilMTSGPEGLDPRIETREIVFDADVSLVTPFLKVATVSRGGSGHMTF
Ga0066388_10511483523300005332Tropical Forest SoilMSAGPEGLDPTIQTREIVFDADVSMVTPFLKLATVSRGNAGHMTFACDEGPSLGGLG
Ga0070708_10144223823300005445Corn, Switchgrass And Miscanthus RhizosphereMTQEPEGLDPTIQTRDIAFEADVQSVTPFLKLATVSHNGAA
Ga0066682_1088700723300005450SoilVSAAPEGLNPKIETREIVFDASVDLVTPFLKLATVSRGGAGHMTFASD
Ga0070707_10095230933300005468Corn, Switchgrass And Miscanthus RhizosphereMTTPEGLDPTVRSREIVFEADVEGVTPFLKVATVHRNGAGHMTFA
Ga0070698_100008465113300005471Corn, Switchgrass And Miscanthus RhizosphereMTTVPDGLDPTIQTREIVFDADVSLVTPFLKLATVSRGGAGHMTFASDEGPT
Ga0070741_1044179913300005529Surface SoilMTTTPEGLDPQIRTREIVFEADVRGVTPFLKLATVSRNGTGHMT
Ga0066702_1055962213300005575SoilMSKIPAGLDPTITRREIVFEADVASVTPFLKVATV
Ga0068857_10140372713300005577Corn RhizosphereMTTEPEGLDPQIRTREIVFEADVDLVTPFLKLATVSRGGTGHMTFASDEGPNLG
Ga0066706_1037445613300005598SoilMSPEPQGLDPTITRREIVFEADVASVTPFLKIATTHRNNTGHMTFACDEGPSLG
Ga0066903_10631715523300005764Tropical Forest SoilMAQPPEGLDPTIQRREIAFEADVQSVTPFLKLATVSLNGAAHHTFACDEGP
Ga0066903_10666728723300005764Tropical Forest SoilMSTLPSGLDPTVQTREVVFDADVSLVTPFLKLATVSRGG
Ga0066903_10879356213300005764Tropical Forest SoilMSMTPEGLDPSIRTREIVFEADVSSVTPFLKLATVSRGGSGHMTFACDE
Ga0081538_1012892323300005981Tabebuia Heterophylla RhizosphereMATAQTPEGLNPQVTSREVVFEADVKALTPMLKVATVSRQGGKDHYTFACDEGSSLGGL
Ga0066651_1073842113300006031SoilMSPDPEGLDPTITRREIVFEADVTSVTPFLKIATAHR
Ga0066652_10122313533300006046SoilMSPDPEGLDPTITRREIVFEADVTSVTPFLKIATAHRNNTGHMTFACDEGPSL
Ga0075024_10061210423300006047WatershedsMTTPEGLDPKIQTREIVFDADVTAVTPFLKLATVHRNGAGHMTFACDEG
Ga0075417_1063171413300006049Populus RhizosphereMGETPEGLDPTIRTRDIVFEADVESVTPFLKLATVSHNGKAHHTFACD
Ga0075432_1037615823300006058Populus RhizosphereVSRAPEGLDPAVQSREIVFEADVTSVTPFLKLATVSRG
Ga0066659_1081603713300006797SoilMTHVPEGLDPTIQSRDIVFEADVQSVTPFLKLATVSHNGSAHKTFAC
Ga0075428_10035733853300006844Populus RhizosphereVSRAPEGLDPAVQSREIVFEADVTSVTPFLKLATVSRGGSGHMSFLSDEGPNLGGLGS
Ga0075425_10053999843300006854Populus RhizosphereMDRVPEGLDPTVQSREITFEADVTSVTPFLKLATV
Ga0075425_10138055333300006854Populus RhizosphereMARVPEGLDPTIATREITFEADVTSVTPFLKVATVDRGGTGHMTFASDEGPNLGG
Ga0075434_10253546413300006871Populus RhizosphereMTSIPEGLNPKIETREIVFEADVNLVTPFLKLATV
Ga0079218_1332123823300007004Agricultural SoilMSPDPEGLDPSITRREIVFEADVMSVTPFLKVATASRNDSGH
Ga0075435_10059732333300007076Populus RhizosphereMTRDPEGLDPTVRSRDILFEADVHSVTPFLKLATVSHNGTAHKTFACDEG
Ga0066710_10475719323300009012Grasslands SoilMATVPDGLNPRIQTREIVFDADVNLVTPFLKLATVSRGG
Ga0099829_1029694053300009038Vadose Zone SoilMPEGLDPKVQTREIVFDADVSLVTPFLKLATVSRSGAGH
Ga0099829_1160912523300009038Vadose Zone SoilMTTVPQGLDPNIQTREIVFDADVNLVTPFLKLATVSRGGSGHMTFA
Ga0099830_1100697723300009088Vadose Zone SoilMNRVPEGLDPAIAQREIVFEADVTSVTPFLKLATVSRDGKDHMSFACDE
Ga0099830_1126683613300009088Vadose Zone SoilMTTPEGLDSTIRSREIVFEADVEGVTPFLKVATVHHNGAGHMTFACDEGPSLGGQ
Ga0099828_1023700743300009089Vadose Zone SoilMNRVPEGLDPAIAQREIVFEADVTSITPFLKLATVSRDGKDHMSFACDEGPNLGGLG
Ga0099828_1199938813300009089Vadose Zone SoilMTREPEGLDPTIQSREILFEADVQSVTPFLKVATVSHNGAAHKTFACDEG
Ga0099827_1036525413300009090Vadose Zone SoilMTTVPEGLDPQIQTREIVFDADVSMVTPFLKMATVSRGGS
Ga0099792_1083550023300009143Vadose Zone SoilMATVPEGLNPKIETREIVFDADVNLVTPYLKLATVSRGDSGHMTFASDEGPNLGG
Ga0114129_1335301713300009147Populus RhizosphereMDRVPEGLDAAVQSREITFEADVTSVTPFLKLATV
Ga0105059_104590013300009795Groundwater SandMTTTPEGLDPKIQTREIVFDADVSLVTPFLKLATVSRGGAVT*
Ga0105089_110125613300009809Groundwater SandVTTGPEGLDPKIQTREIVFDADVSLVTPFLKLATVSRGGAGHMTFASDEGPTLGG
Ga0105088_102361333300009810Groundwater SandMTTVPQGLDPNIQTREIVFDADVNLVTPFLKLATVSRGGTGHMTFASDEGP
Ga0105062_108966913300009817Groundwater SandMTTVPQGLDPNIQTREIVFDADVNLVTPFLKLATVSR
Ga0105087_105117133300009819Groundwater SandMTTVPQGLDPNIQTREIVFDADVNLVTPFLKLATVSRGGTGHMTFASDE
Ga0105064_111838413300009821Groundwater SandMTTPEGLEPTIRSREIVFEADVEGVTPFLKVATVHRNGAGHMT
Ga0105058_114857923300009837Groundwater SandVTTGPEGLDPKIQTREIVFDADVSLVTPFLKLATVSRGGAGHM
Ga0105074_106629933300010029Groundwater SandMTTVPQGLDPNIQTREIVFDADVNLVTPFLKLATVSRGGTGHMTFASDEGPNLG
Ga0126380_1126533333300010043Tropical Forest SoilMTTVPEGLDPTIVTREIVFDADVSLVTPFLKLATVSRGGQG
Ga0126380_1198654113300010043Tropical Forest SoilMAQDPEGLHPTIRTRDIVFAADVQSVTPFLKLATVSHGGTAHHTFACDEGPS
Ga0126380_1201058913300010043Tropical Forest SoilMSTLPSGLDPTVQTREIVFDADVSLVTPFLKLATVSR
Ga0126382_1047758243300010047Tropical Forest SoilMSTVPEGLDPKIQTREIVFDADVSLVTPFLKLATV
Ga0126382_1142266733300010047Tropical Forest SoilMSTLPSGLDPTVRTREIVFDADVSLVTPFLKLATVSRGGEG
Ga0126370_1038344523300010358Tropical Forest SoilMKGIDMTTAPDGLDPTIQTRQIVFEADVSLVTPFLKL
Ga0126376_1063366433300010359Tropical Forest SoilMAGEPEGLDPTIHTRDIVFEADVQSVTPFLKLATVSHNGTAHKTFAC
Ga0126376_1328861823300010359Tropical Forest SoilVNREPEGLDPTVRGREIVFEADVTSVTPFLKLATVSRGGSGHM
Ga0126377_1074047013300010362Tropical Forest SoilMATPEGLNPEIRTREMVFEADVQAVTPFLKLATVSRNGEGHMTFACDEGPSLGGLGSA
Ga0126377_1140534923300010362Tropical Forest SoilMPQLPEGLDPTIQRREIVFEADVASVTPFLKLATVSHNGAAHKTFACDEGPNLGGLGS
Ga0126377_1182858323300010362Tropical Forest SoilMAIPDGLNPRIETREIVFDADVSMVTPFLKLATVSRGGSGAMTFASDEGPSLGGLGSA
Ga0126377_1294022713300010362Tropical Forest SoilMSTLPSGLDPTVQTREIVFDADVSLVTPFLKLATVSRGG
Ga0126379_1131521713300010366Tropical Forest SoilMAGEPEGLDPTIHTRDIVFEADVQSVTPFLKLATVSHNGTAHKTFACDEGPSL
Ga0137391_1095660223300011270Vadose Zone SoilMAQEPEGLDPTIKTHEIAFEADVQSVTPFLKLATVSHNGTAHETFACDEGP
Ga0137388_1015843653300012189Vadose Zone SoilMTRDPEGLDPTIRTREILFEADFQSVTPFLKVATVSHNGAAHKTFACDEGPSLGGL
Ga0137388_1019564363300012189Vadose Zone SoilMATLPQGLDPKIQTREIVFDAEVSLVTPFLKLATVSRGG
Ga0137388_1121676513300012189Vadose Zone SoilMSQGPEGLDPTIRSREIVFEADVRSVTPFLRLATVSH
Ga0137399_1072462213300012203Vadose Zone SoilMPRLPEGLDPSITTRQITFEADVTSVTPFLKLATVSREGASPQSFACDEGPSLG
Ga0137367_1111677323300012353Vadose Zone SoilMAPGPEGLDPTIHTREIAFEADVQSVTPFLKLATVSHNGTA
Ga0137369_1105871913300012355Vadose Zone SoilMATVPDGLNPRIETREIVFDADVNLVTPFLKLATVSRGGTGHMTFASDEGPNL
Ga0137373_1022051723300012532Vadose Zone SoilMAQLPEGLDPTIQSREIVFEADVHSVTPFLKLATVSHNGTAHKTFACDEGPSLGGLG*
Ga0137397_1112181113300012685Vadose Zone SoilVREEAVMSTPEGLDPKVQTREIVFEADVEGVTPFLKLATVHLNGAGHMTFACDEGPSL
Ga0137396_1003419723300012918Vadose Zone SoilMTSVPEGLNPKIETRAIVFEADVNLVTPFLKLATVSRGGSGPMTFASDEGPSPGTGTC*
Ga0137396_1022293213300012918Vadose Zone SoilMTSVPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMTFASDEGPGPGTGTC*
Ga0137394_1020555063300012922Vadose Zone SoilVSAEPEGLNPRIETREIVFDASVDLVTPFLKLATVSRGG
Ga0137359_1041408513300012923Vadose Zone SoilMAHVPEGLDSTIQSRDIVFEADVQSVTPFLKLATVEPQWQCT*
Ga0137359_1122250823300012923Vadose Zone SoilMRREPEGLDPTIQSREILFEADVQSVTPFLKLATVSHNGAAHKTFACDE
Ga0137404_1039663413300012929Vadose Zone SoilMTTAPEGLDPTIQSREIVFDAEVDLVSPFLKLATVSRDGAGHMT
Ga0126375_1104120013300012948Tropical Forest SoilMNRVPEGLDPTIATREITFEADVTSVTPFLKVATVNRGGTGHMTFASDEGPNLGG
Ga0126369_1006626813300012971Tropical Forest SoilMKGIDMTTAPDGLDPTIQTRQIVFEADVSLVTPFLKLATVSRGGGGHMTFASDEGPNLGG
Ga0134077_1009013123300012972Grasslands SoilMSATPEGLDPSITRREIVFEADVTSVTPFLKVATVSRAGTGHMTFACDEGPNLGGLGS
Ga0134077_1058663423300012972Grasslands SoilVSAAPEGLNPKVETREIVFDASVDLVTPFLKLATVSRGGAGHMTFA
Ga0134110_1038372613300012975Grasslands SoilMTSIPEGLNPKIETCEIVFEADVNLVTPFLKLATVRRGGSGHMTFASDEGPSLGGLG
Ga0134075_1028624933300014154Grasslands SoilMTTVPQGLDPNIQTREIVFEADVNLVTPFLKLATV
Ga0134075_1052850123300014154Grasslands SoilVEVDYHAALSTLEEAIVSTHTPEGLDPTIRRREIVFEADVTSVTPFLKLATTSRGGSGHMTFACDEGPSLG
Ga0075312_105789333300014254Natural And Restored WetlandsMTTLPEGLDPTIRTREIVFEADVSLVTPFLKLATVSRGGAGHMTF
Ga0075301_107622523300014262Natural And Restored WetlandsMAGTPEGLDPTIRTRDILFEADVQSVTPFLKLATVSHNGKGHHTFACDEG
Ga0180066_111326323300014873SoilMTTVPDGLDPKIQTREIVFEADVSLVTPFLKLATVSRGGAGHMTFASDE
Ga0180094_116483323300014881SoilMTTTPEGLDPKIQTREIVFDADVNLVTPFLKLATVSRGGAGHMTFA
Ga0137418_1004109953300015241Vadose Zone SoilMTSVPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMTFASDEGPSPGTGTC*
Ga0137418_1088907033300015241Vadose Zone SoilMSVVPDGLNPKIETREIVFDASVDLVTPFLKLATVSRGG
Ga0137403_1003219793300015264Vadose Zone SoilMTTAPEGLDPTIGSREIVFDAEVDLVSPFLKLATVSRDGAGHMTFASDEGPNLGPHARR
Ga0134083_1002294213300017659Grasslands SoilMSATPEGLDPSITRREIVFEADVTSVTPFLKVATVSRAGTGHMTFACDEGPNLGGL
Ga0134083_1048737913300017659Grasslands SoilMTSIPEGLNPKIETREIVFEADVNRVTPFLKLATVSRGGSGPMTFASDEGPSL
Ga0184615_1032797813300018059Groundwater SedimentVRNDKGAATTSIPEGLDPQIKTREIVFDADVSGVTPFLKLATVSRQG
Ga0184612_1062640223300018078Groundwater SedimentMTTVPQGLDLNIQTREIVFDADVNLVTPFLKLATVSRGGTGHMTFASDEGPN
Ga0187892_1021606533300019458Bio-OozeMTAPEGLDPTIHTREIVFDAEVDLVSPFLKLATVSRGGAGH
Ga0137408_137354253300019789Vadose Zone SoilMSAVPEGLNPKIETREIVFDASVDLVTPFLKLATVSRGGTRAT
Ga0206224_101120033300021051Deep Subsurface SedimentMTSVPEGLDPKVQTREIVFDADVSLATPFLKVATVSRGGAGHMTFASDEGPSLGGLG
Ga0210378_1030180723300021073Groundwater SedimentMATVPDGLNPRIEPREIVFDADVNLVTPFLKLATVSRGGSGHMTFA
Ga0209519_1070240923300025318SoilVTAAVPDGLDPRIQTREIVFEADVSVVTPFLKLATVSRGGA
Ga0209640_1016981353300025324SoilVTAAVPDGLDPRIQTRDIVFEADVSVVTPLLKLATVSRGGAGHMTFASDEGPSLGGL
Ga0207653_1040578623300025885Corn, Switchgrass And Miscanthus RhizosphereMTSIPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMTFASDEGPSL
Ga0207684_1049134513300025910Corn, Switchgrass And Miscanthus RhizosphereMAHVPEGLDPTIQSRDIVFEADVQSVTPFLKLATVSHNGS
Ga0209235_104001013300026296Grasslands SoilMATVPEGLNPKVETREIVFDADVSLVTPFLKLATVSRGGSGHMTFASD
Ga0209761_118093513300026313Grasslands SoilMTTVPQGLDPNTQTREIVFEADVNLVTPFLKLATVSRGGTGHMTFAS
Ga0209801_131106223300026326SoilMSATPEGLDPTITRREIVFEADVTSVTPFLKVATVSRAGT
Ga0209802_101333673300026328SoilMTSIPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMT
Ga0209808_105516313300026523SoilMATLPEGLDPTIQRREIVFEADVTSVTPFLKLATVSHNGTAHK
Ga0209474_1076465513300026550SoilMSKIPAGLDPTITRSEIVFEADVASVTPFLKVATVSRDGEGHMTF
Ga0209474_1076653213300026550SoilMTSIPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMTFA
Ga0209877_101839433300027032Groundwater SandMTTVPDGLDPKIQTREIVFEADVSLVTPFLKLATVSRGGAGHMTF
Ga0209106_110426823300027616Forest SoilMTSVPEGLNPKIETREIVFEADVNLVTPFLKLATV
Ga0209466_108208123300027646Tropical Forest SoilMAQLPEGLDPTIQRREIVFEADVASVTPFLKLATVSHNGTAH
Ga0256866_109220713300027650SoilMPTPEGLDPSIRSREIVFEADVTGVTPFLKLATAHRN
Ga0209701_1056307713300027862Vadose Zone SoilMNRVPEGLDPAIAQREIVFEADVTSVTPFLKLATVSRDGK
Ga0209283_1075185623300027875Vadose Zone SoilMTTPEGLDPTIRSREIVFEADVRGVTPFLKVATVHRGGTGHMTFACDEGPALGGLG
(restricted) Ga0233417_1011932913300028043SedimentMAPGPEGLDPTIRTREISFEADVQSVTPFLKLATVSHNGTAHKTFACDEGPALGGLGS
Ga0137415_1038810533300028536Vadose Zone SoilMTSVPEGLNPKIETREIVFEADVNLVTPFLKLATVSRGGSGPMTFASDEGPGPGTGTC
Ga0299907_1018220853300030006SoilMPTPEGLDPSIRSREIVFEADVTGVTPFLKLATAHRNG
Ga0299907_1059409513300030006SoilMTPVPEGLDPSIHTREIVFEADVDLVTPFLKLATVSRGGRGHLTFASDEGPSLGGL
Ga0302046_1004531473300030620SoilMASVPEGLDPRIQTREIVFEADVDLVTPFLKLATVSRGGSGHMTF
Ga0307408_10012370413300031548RhizosphereMSRTPEGLDPGIQTREIVFEADVSLVTPFLKLATVSRGGQ
Ga0307469_1123765313300031720Hardwood Forest SoilMTQGPSGLDPTIQSREIAFEADVQSVTPFLKLATVSHNGTAHKTFACDEGPS
Ga0307469_1184224923300031720Hardwood Forest SoilMPTPEGLDPTIKTREIVFEADVSSVTPFLKLATVSRGGGGHMTFASDEGPSLGG
Ga0307411_1063375733300032005RhizosphereMDRTPEGLDPSISSREITFEADVSAVTPFLKVAIVHRNGRGHMTFACDEGPTLGG
Ga0307411_1210281123300032005RhizosphereMSRTPEGLDPGIQTREIVFEADVSLVTPFLKLATVSRGGQGHLTFASDE
Ga0306920_10040462143300032261SoilMTTAPDGLDPTIQTRQIVFEADVSLVTPFLKLATVSRSGGGHM
Ga0306920_10048924143300032261SoilMNRGTESRVPEGLDPAVQSREIPFEADVTSVTPFLKLAAVSRGGS
Ga0364934_0251545_524_6703300034178SedimentMTTVPEGLDPKIQTREIVFDADVSLVTPFLKLATVSRGGAGHMTFASDE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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