NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067514

Metagenome / Metatranscriptome Family F067514

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067514
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 54 residues
Representative Sequence DALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Number of Associated Samples 91
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.82 %
% of genes near scaffold ends (potentially truncated) 92.80 %
% of genes from short scaffolds (< 2000 bps) 85.60 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (95.200 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(30.400 % of family members)
Environment Ontology (ENVO) Unclassified
(76.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(76.800 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.81%    β-sheet: 0.00%    Coil/Unstructured: 35.19%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF09374PG_binding_3 0.80
PF13884Peptidase_S74 0.80



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.20 %
All OrganismsrootAll Organisms4.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003277|JGI25908J49247_10080073Not Available806Open in IMG/M
3300003393|JGI25909J50240_1037330Not Available1044Open in IMG/M
3300003490|JGI25926J51410_1003821Not Available3114Open in IMG/M
3300003493|JGI25923J51411_1015845Not Available1575Open in IMG/M
3300004096|Ga0066177_10132472Not Available981Open in IMG/M
3300004125|Ga0066182_10018828Not Available1401Open in IMG/M
3300004836|Ga0007759_11535421Not Available945Open in IMG/M
3300005527|Ga0068876_10046807Not Available2646Open in IMG/M
3300005581|Ga0049081_10176812Not Available773Open in IMG/M
3300005581|Ga0049081_10275327Not Available585Open in IMG/M
3300005581|Ga0049081_10307102Not Available545Open in IMG/M
3300005583|Ga0049085_10161960Not Available752Open in IMG/M
3300006805|Ga0075464_11055543Not Available511Open in IMG/M
3300007363|Ga0075458_10249190Not Available541Open in IMG/M
3300008962|Ga0104242_1048727Not Available715Open in IMG/M
3300009068|Ga0114973_10542196Not Available600Open in IMG/M
3300009151|Ga0114962_10078245All Organisms → cellular organisms → Bacteria → Proteobacteria2102Open in IMG/M
3300009152|Ga0114980_10279499Not Available971Open in IMG/M
3300009152|Ga0114980_10609282Not Available616Open in IMG/M
3300009152|Ga0114980_10725732Not Available556Open in IMG/M
3300009154|Ga0114963_10454934Not Available686Open in IMG/M
3300009155|Ga0114968_10383810Not Available770Open in IMG/M
3300009159|Ga0114978_10582395Not Available648Open in IMG/M
3300009160|Ga0114981_10167575Not Available1209Open in IMG/M
3300009163|Ga0114970_10251459Not Available1021Open in IMG/M
3300009163|Ga0114970_10457394Not Available701Open in IMG/M
3300009164|Ga0114975_10221390Not Available1065Open in IMG/M
3300009180|Ga0114979_10061349Not Available2350Open in IMG/M
3300009180|Ga0114979_10320290Not Available918Open in IMG/M
3300009180|Ga0114979_10320291Not Available918Open in IMG/M
3300009180|Ga0114979_10830050Not Available517Open in IMG/M
3300009180|Ga0114979_10856842Not Available507Open in IMG/M
3300009181|Ga0114969_10168585Not Available1363Open in IMG/M
3300009183|Ga0114974_10572314Not Available626Open in IMG/M
3300009183|Ga0114974_10598257Not Available608Open in IMG/M
3300009184|Ga0114976_10164899Not Available1235Open in IMG/M
3300009185|Ga0114971_10811735Not Available506Open in IMG/M
3300009187|Ga0114972_10248849Not Available1074Open in IMG/M
3300010157|Ga0114964_10161054Not Available1087Open in IMG/M
3300010334|Ga0136644_10776535Not Available517Open in IMG/M
3300010370|Ga0129336_10461158Not Available688Open in IMG/M
3300011010|Ga0139557_1004799All Organisms → Viruses → Predicted Viral2857Open in IMG/M
3300011010|Ga0139557_1010072Not Available1863Open in IMG/M
3300012012|Ga0153799_1080363Not Available585Open in IMG/M
3300012013|Ga0153805_1002252All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3674Open in IMG/M
3300013006|Ga0164294_10141798Not Available1744Open in IMG/M
3300013014|Ga0164295_10411303Not Available1031Open in IMG/M
3300015050|Ga0181338_1063181Not Available531Open in IMG/M
3300017701|Ga0181364_1046097Not Available688Open in IMG/M
3300017716|Ga0181350_1111494Not Available664Open in IMG/M
3300017722|Ga0181347_1016597Not Available2350Open in IMG/M
3300017722|Ga0181347_1172943Not Available580Open in IMG/M
3300017736|Ga0181365_1150576Not Available551Open in IMG/M
3300017761|Ga0181356_1070886Not Available1170Open in IMG/M
3300017761|Ga0181356_1094945Not Available977Open in IMG/M
3300017766|Ga0181343_1189655Not Available565Open in IMG/M
3300017777|Ga0181357_1198570Not Available717Open in IMG/M
3300017777|Ga0181357_1339657Not Available501Open in IMG/M
3300017780|Ga0181346_1290747Not Available557Open in IMG/M
3300017784|Ga0181348_1305482Not Available531Open in IMG/M
3300018815|Ga0187845_1117898Not Available878Open in IMG/M
3300018868|Ga0187844_10264389Not Available724Open in IMG/M
3300019093|Ga0187843_10099940Not Available1304Open in IMG/M
3300019784|Ga0181359_1037623Not Available1874Open in IMG/M
3300019784|Ga0181359_1072251Not Available1305Open in IMG/M
3300019784|Ga0181359_1095707Not Available1095Open in IMG/M
3300019784|Ga0181359_1115709Not Available966Open in IMG/M
3300022179|Ga0181353_1027392Not Available1509Open in IMG/M
3300022179|Ga0181353_1075025Not Available860Open in IMG/M
3300022179|Ga0181353_1135030Not Available579Open in IMG/M
3300022190|Ga0181354_1035029Not Available1652Open in IMG/M
3300022190|Ga0181354_1057452Not Available1294Open in IMG/M
3300022190|Ga0181354_1224512Not Available547Open in IMG/M
3300022407|Ga0181351_1214635Not Available630Open in IMG/M
3300022752|Ga0214917_10006808All Organisms → cellular organisms → Bacteria11763Open in IMG/M
3300022752|Ga0214917_10108324Not Available1592Open in IMG/M
3300023179|Ga0214923_10111981Not Available1807Open in IMG/M
3300023179|Ga0214923_10298854Not Available877Open in IMG/M
3300023179|Ga0214923_10608239Not Available516Open in IMG/M
3300023184|Ga0214919_10780077Not Available526Open in IMG/M
3300025635|Ga0208147_1149686Not Available543Open in IMG/M
3300025647|Ga0208160_1010029Not Available3234Open in IMG/M
3300025896|Ga0208916_10080741Not Available1362Open in IMG/M
3300027393|Ga0209867_1008790Not Available1413Open in IMG/M
3300027586|Ga0208966_1126869Not Available686Open in IMG/M
3300027586|Ga0208966_1183364Not Available541Open in IMG/M
3300027659|Ga0208975_1182557Not Available569Open in IMG/M
3300027736|Ga0209190_1182937Not Available879Open in IMG/M
3300027741|Ga0209085_1262219Not Available673Open in IMG/M
3300027756|Ga0209444_10023789Not Available3002Open in IMG/M
3300027763|Ga0209088_10014303Not Available4215Open in IMG/M
3300027763|Ga0209088_10194543Not Available871Open in IMG/M
3300027798|Ga0209353_10230003Not Available803Open in IMG/M
3300027808|Ga0209354_10001744All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium ADurb.BinA1849475Open in IMG/M
3300027808|Ga0209354_10047893Not Available1721Open in IMG/M
3300027892|Ga0209550_10116662Not Available1964Open in IMG/M
3300027971|Ga0209401_1153448Not Available896Open in IMG/M
3300027973|Ga0209298_10069091Not Available1596Open in IMG/M
3300027974|Ga0209299_1346816Not Available508Open in IMG/M
(restricted) 3300028581|Ga0247840_10039760Not Available3956Open in IMG/M
3300031539|Ga0307380_10188491Not Available2004Open in IMG/M
3300031673|Ga0307377_10438855Not Available963Open in IMG/M
3300031673|Ga0307377_11119784Not Available520Open in IMG/M
3300031707|Ga0315291_10707848Not Available893Open in IMG/M
3300031707|Ga0315291_11276277Not Available594Open in IMG/M
3300031746|Ga0315293_10093022Not Available2567Open in IMG/M
3300031772|Ga0315288_11209053Not Available651Open in IMG/M
3300031834|Ga0315290_11245987Not Available615Open in IMG/M
3300031873|Ga0315297_10733822Not Available826Open in IMG/M
3300032046|Ga0315289_10575126Not Available1058Open in IMG/M
3300032046|Ga0315289_10878388Not Available775Open in IMG/M
3300032046|Ga0315289_10927753Not Available743Open in IMG/M
3300032046|Ga0315289_11272619Not Available584Open in IMG/M
3300032053|Ga0315284_11729491Not Available649Open in IMG/M
3300032092|Ga0315905_10271405Not Available1638Open in IMG/M
3300032143|Ga0315292_11007756Not Available691Open in IMG/M
3300032177|Ga0315276_10403592Not Available1464Open in IMG/M
3300032256|Ga0315271_10197886All Organisms → Viruses → Predicted Viral1607Open in IMG/M
3300032275|Ga0315270_10080843Not Available1871Open in IMG/M
3300033993|Ga0334994_0385427Not Available682Open in IMG/M
3300034101|Ga0335027_0548925Not Available714Open in IMG/M
3300034103|Ga0335030_0849580Not Available530Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake30.40%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake27.20%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment12.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.60%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic5.60%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.00%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous4.00%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.40%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater1.60%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.80%
Surface IceEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice0.80%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.80%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand0.80%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003493Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300004125Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)EnvironmentalOpen in IMG/M
3300004836Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005583Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRFEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007363Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNAEnvironmentalOpen in IMG/M
3300008962Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300009185Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaGEnvironmentalOpen in IMG/M
3300009187Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaGEnvironmentalOpen in IMG/M
3300010157Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaGEnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300012013Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface IceEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013014Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaGEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300018815Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_68EnvironmentalOpen in IMG/M
3300018868Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_50EnvironmentalOpen in IMG/M
3300019093Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43EnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027756Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027974Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300028581 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17mEnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032053Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25908J49247_1008007313300003277Freshwater LakeLERERQYTKAQVITQSANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
JGI25909J50240_103733013300003393Freshwater LakeGKAQVVTQAANSDLAAMANYELSQVGGMKQITPVSLGDLGIEEII*
JGI25926J51410_100382153300003490Freshwater LakeERQYAKAQAVVSSANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV*
JGI25923J51411_101584523300003493Freshwater LakeHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII*
Ga0066177_1013247223300004096Freshwater LakeHVSHVVLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0066182_1001882813300004125Freshwater LakeALTHADALERERQYAKAQAVVATANADLSAMAQYEMSQVGGIKVITPSSLGEFSILDISV
Ga0007759_1153542113300004836Freshwater LakeERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0068876_1004680743300005527Freshwater LakeSLTHADALERERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLTTEEITAS*
Ga0049081_1017681213300005581Freshwater LenticERERQYAKAQAITQTANTDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0049081_1027532723300005581Freshwater LenticDALERERQYAKAQAVVSTANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV*
Ga0049081_1030710213300005581Freshwater LenticRQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0049085_1016196023300005583Freshwater LenticDALERERQYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEII*
Ga0075464_1105554323300006805AqueousTHSDALERERQYAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0075458_1024919023300007363AqueousGKSQIVTQAANSDLAAMANYELSQVGGMKQITPIGLGELSVEEMFSN*
Ga0104242_104872723300008962FreshwaterERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLTTEEITAS*
Ga0114973_1054219623300009068Freshwater LakeLTHADALERERQYAKAQAITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0114962_1007824523300009151Freshwater LakeLVLALTHADALERERQYAKAQAITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114980_1027949923300009152Freshwater LakeLTHADALERERQYAKAQSVEQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0114980_1060928223300009152Freshwater LakeVLALTHSDALERERQYAKAQAITQTANTDLAAMANYELSQVGGMKQITPQSLGELTIEEMFSA*
Ga0114980_1072573213300009152Freshwater LakeITQTANTDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114963_1045493423300009154Freshwater LakeVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA*
Ga0114968_1038381013300009155Freshwater LakeTHADALERERQYAKAQSVVQTANADLAAMANYELSQVGGVKQITPVSLGDLMTEEITSA*
Ga0114978_1058239513300009159Freshwater LakeKAQAVVSTANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV*
Ga0114981_1016757523300009160Freshwater LakeYAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0114970_1025145923300009163Freshwater LakeAANADLAAMANYELSQVGGMKQITPASLGELSIEEII*
Ga0114970_1045739413300009163Freshwater LakeADALERERQYAKAQSVVQTANADLAAMANYELSQVGGVKQITPVSLGDLMTEEITAA*
Ga0114975_1022139023300009164Freshwater LakeERQYAKAQAVVQTANADLAAMANYELSQVGGIKQITPVSLGDLMTEEITAA*
Ga0114979_1006134913300009180Freshwater LakeLTHADALERERQYAKAQAVVATANADLSAMAQYEMSQVGGIKVITPSSLGEFSILDISV*
Ga0114979_1032029013300009180Freshwater LakeDALERERQYGKAQVVTQAANSDLAGMANYELSQVGGIKQITPVSLGELTIEEMFSA*
Ga0114979_1032029113300009180Freshwater LakeDALERERQYGKAQVVTQAANSDLAGMANYELSQVGGIKQITPASLGELTIEEMFSA*
Ga0114979_1083005023300009180Freshwater LakeERERQYAKAQAITQTANTDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114979_1085684223300009180Freshwater LakeQYAKAQAITQTANTDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114969_1016858523300009181Freshwater LakeYAKAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA*
Ga0114974_1057231423300009183Freshwater LakeVQHVVLALTHADALERERQYAKAQAVVSTANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV*
Ga0114974_1059825723300009183Freshwater LakeRQYAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0114976_1016489913300009184Freshwater LakeADALERERQYAKAQAITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114971_1081173513300009185Freshwater LakeLALTHADALERERQYAKAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA*
Ga0114972_1024884913300009187Freshwater LakeQYAKAQAITQTANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0114964_1016105423300010157Freshwater LakeVHHLVLALTHADALERERQYAKAQAITQTANADLALMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0136644_1077653523300010334Freshwater LakeAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA*
Ga0129336_1046115813300010370Freshwater To Marine Saline GradientRQYTKAQVITQGANTDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA*
Ga0139557_100479913300011010FreshwaterRQYGKSQIVTQAANSDLAAMANYELSQVGGMKQITPISLGDLSIEEII*
Ga0139557_101007213300011010FreshwaterLPHVHHLVLALTHSDALERERQYTKAQVITQSANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0153799_108036323300012012FreshwaterYAKAQAITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0153805_100225233300012013Surface IceXRQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0164294_1014179823300013006FreshwaterYGKAQVVTQAANADLASMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0164295_1041130323300013014FreshwaterSDALERERQYAKAQAITQTANADLALMANYELSQVGGIKQITPQSLGELTIEEMFSA*
Ga0181338_106318123300015050Freshwater LakeYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII*
Ga0181364_104609713300017701Freshwater LakeADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0181350_111149423300017716Freshwater LakeADALERERQYAKAQSVVSSANADLAQMAQYEMSQVGGMKVITPSSLGEYSITDIAV
Ga0181347_101659733300017722Freshwater LakeVTQAANSDLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0181347_117294313300017722Freshwater LakeYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEII
Ga0181365_115057623300017736Freshwater LakeLERERQYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEII
Ga0181356_107088613300017761Freshwater LakeTHADALERERQYAKAQSVVSTANADLAQMAQYEMSQVGGIKAITPSSLGEYSITDIAV
Ga0181356_109494523300017761Freshwater LakeELRLPHVHHLVLALTHADALERERQYTKAQVITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0181343_118965513300017766Freshwater LakeRLPHVHHLVLALTHSDALERERQYAKAQAITQTANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0181357_119857013300017777Freshwater LakeLALTHADALERERQYGKSQIVTQAANADLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0181357_133965723300017777Freshwater LakeERERQYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPSMLGELSIEEII
Ga0181346_129074723300017780Freshwater LakeVSSANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV
Ga0181346_133177523300017780Freshwater LakeTKAQVITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0181348_130548213300017784Freshwater LakeEHADALERERQYAKAQAVVATANADLSAMAQYEMSQVGGIKVITPSSLGEFSILDISV
Ga0187845_111789823300018815FreshwaterLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0187844_1026438923300018868FreshwaterHSDALERERQYAKAQAITQTANADLALMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0187843_1009994023300019093FreshwaterERERQYTKAQVITQGANTDLSAMANYELSQVGGVKQITPQSLGELTIEEMFSA
Ga0181359_103762313300019784Freshwater LakeRQYAKAQSVVSTANADLAQMAQYEMSQVGGIKAITPSSLGEYSITDIAV
Ga0181359_107225123300019784Freshwater LakeLTHADALERERQYAKAQAVVSSANADLSQMAQYEMSQVGGIKVITPSSLGEYSITDIGV
Ga0181359_109570723300019784Freshwater LakeALTHADALERERQYAKAQAVVGSANSDLSAMAQYEMSQVGGIKAITPSSLGEYSILDIVV
Ga0181359_111570913300019784Freshwater LakeQYGKAQLVVQTANTDLSAMANYELSQVGGMKQITPSSLGELGLEEII
Ga0181353_102739213300022179Freshwater LakeQYAKAAQIVQTANADLSAMANYELSQVGGIKQITPSSLGDLTTEEITAS
Ga0181353_107502523300022179Freshwater LakeRERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLTTEEITAS
Ga0181353_113503013300022179Freshwater LakeTHADALERERQYGKAQVVTQAANADLAGMANYELSQVGGIKQITPVGLGELSVEEMFSA
Ga0181354_103502913300022190Freshwater LakeLERERQYGKAQVVTQAANSDLASMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0181354_105745223300022190Freshwater LakeNHLVLALTHADALERERQYTKAQVITQGANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0181354_122451223300022190Freshwater LakeREAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0181351_121463523300022407Freshwater LakeTQAANADLAAMANYELSQVGGMKQITPISLGELSIEEII
Ga0214917_1000680813300022752FreshwaterLTHADALERERQYAKAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0214917_1010832413300022752FreshwaterADALERERQYAKAQAVVATANADLSAMAQYEMSQVGGIKVITPSSLGESSILDISV
Ga0214923_1011198123300023179FreshwaterYAKAQSVVQTANADLAVMANYELSQVGGIKQITPSSLGDLTTEEITAS
Ga0214923_1029885413300023179FreshwaterQTANTDLASMANYELSQVGGMKQITPTSLGELGLEEII
Ga0214923_1060823923300023179FreshwaterHVVLALTHADALERERQYAKAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0214919_1078007713300023184FreshwaterVHHLVLALTHADALERERQYAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA
Ga0208147_114968613300025635AqueousYGKSQIVTQAANSDLAAMANYELSQVGGMKQITPIGLGELSVEEMFSN
Ga0208160_101002913300025647AqueousRERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPVGLGDLSIEEITAA
Ga0208916_1008074113300025896AqueousVLSLTHADALERERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLSIEEISAS
Ga0209867_100879013300027393SandALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0208966_112686913300027586Freshwater LenticHADALERERQYAKAQTVVQTANSDLSAMATYELSQVGGMKQITPASLGELSIEEII
Ga0208966_118336413300027586Freshwater LenticVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0208975_118255713300027659Freshwater LenticERQYAKAQAVVSTANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV
Ga0209190_118293723300027736Freshwater LakeLALTHADALERERQYAKAQSVVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0209085_126221923300027741Freshwater LakeVQAANADLAAMASYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0209444_1002378953300027756Freshwater LakeHVSHVVLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0209296_133542713300027759Freshwater LakeAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA
Ga0209088_1001430313300027763Freshwater LakeRERQYGKAQVVTQAANSDLAGMANYELSQVGGIKQITPASLGELTIEEMFSA
Ga0209088_1019454323300027763Freshwater LakeERERQYAKAQAITQTANTDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0209353_1023000313300027798Freshwater LakeQIVTQAANADLAAMANYELSQVGGMKQITPISLGELSIEEII
Ga0209354_1000174473300027808Freshwater LakeADALERERQYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEII
Ga0209354_1004789323300027808Freshwater LakeALTHADALERERQYAKAQAVVSTANADLAQMAQYEMSQVGGIKVITPSSLGEYSITDIGV
Ga0209550_1011666213300027892Freshwater LakeLERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0209401_115344813300027971Freshwater LakeTHADALERERQYGKAQVVTQAANSDLAAMANYELSQVGGIKQITPVGLGDLSVEEMFSA
Ga0209401_116375213300027971Freshwater LakeVQTANADLAAMANYELSQVGGVKQITPVSLGDLMTEEITAA
Ga0209298_1006909113300027973Freshwater LakeERQYAKAQAITQTANTDLAAMANYELSQVGGMKQITPQSLGELTIEEMFSA
Ga0209299_134681613300027974Freshwater LakeTHSDALERERQYAKAQAITQTANSDLAAMANYELSQVGGVKQITPQSLGELTIEEMFSA
(restricted) Ga0247840_1003976013300028581FreshwaterAQVVTQAANSDLASMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0307380_1018849123300031539SoilDALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0307377_1043885523300031673SoilALERERQYAKAQAVVQTANADLASMANYELSQVGGIKQITPVSLGDLMTEEITAA
Ga0307377_1111978413300031673SoilSHVVLSLTHADALERERQYGKAQVVTQAANADLASMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0315291_1070784813300031707SedimentTHADALERERQYGKSQIVTQAANADLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0315291_1127627723300031707SedimentSHVVLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315293_1009302213300031746SedimentALERERQYGKSQIVTQAANSDLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0315288_1120905333300031772SedimentLTHADALERERQYGKSQIVTQAANSDLAAMANYELSQVGGMKQITPISLGELSVEEMFSN
Ga0315290_1124598713300031834SedimentLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315297_1073382223300031873SedimentLTHADALERERQYGKSQIVTQAANSDLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0315289_1057512623300032046SedimentSQIVTQAANSDLAAMANYELSQVGGMKQITPISLGDLSIEEII
Ga0315289_1087838813300032046SedimentAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEII
Ga0315289_1092775313300032046SedimentDALERERQYGKAQVVTQAANSDLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315289_1127261923300032046SedimentRQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315284_1172949113300032053SedimentDALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315905_1027140513300032092FreshwaterLTHADALERERQYGKAQVVTQAANSDLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0315292_1100775623300032143SedimentYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLSIEEII
Ga0315276_1040359213300032177SedimentVLALTHADALERERQYAKAQTVVQTANSDLSAMASYELSQVGGMKQITPASLGELSIEEI
Ga0315271_1019788633300032256SedimentTHSDAFERERQYAKAQAITQTANSDLAAMANYELSQVGGIKQITPQSLGELTIEEMFSA
Ga0315270_1008084323300032275SedimentHVVLALTHADALERERQYGKAQVVTQAANADLAAMANYELSQVGGMKQITPVGLGDLGIEEII
Ga0334994_0385427_485_6763300033993FreshwaterVLSLTHADALERERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLSTEEITAS
Ga0335027_0548925_534_7133300034101FreshwaterTHADALERERQYAKAQSVVQTANADLAAMANYELSQVGGIKQITPSSLGDLSTEEITAS
Ga0335030_0849580_1_2013300034103FreshwaterHHLVLALTHADALERERQYAKAQAITQTANSDLAAMANYELSQVGGVKQITPASLGELTIEEMFSA


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