Metagenome / Metatranscriptome Family F067489

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067489
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	64 residues
Representative Sequence	GRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETRATDTSGRTL
Number of Associated Samples	98
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.40 %
% of genes near scaffold ends (potentially truncated)	69.60 %
% of genes from short scaffolds (< 2000 bps)	86.40 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (35.200 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.48% β-sheet: 0.00% Coil/Unstructured: 56.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00589	Phage_integrase	35.20
PF02899	Phage_int_SAM_1	9.60
PF13551	HTH_29	4.00
PF01609	DDE_Tnp_1	4.00
PF13384	HTH_23	1.60
PF01526	DDE_Tnp_Tn3	1.60
PF00174	Oxidored_molyb	0.80
PF13148	DUF3987	0.80
PF00108	Thiolase_N	0.80
PF13592	HTH_33	0.80
PF16884	ADH_N_2	0.80
PF11752	DUF3309	0.80
PF13546	DDE_5	0.80
PF00496	SBP_bac_5	0.80
PF03682	UPF0158	0.80
PF03050	DDE_Tnp_IS66	0.80
PF01905	DevR	0.80
PF01923	Cob_adeno_trans	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	9.60
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	9.60
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	4.00
COG3293	Transposase	Mobilome: prophages, transposons [X]	4.00
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	4.00
COG5421	Transposase	Mobilome: prophages, transposons [X]	4.00
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	4.00
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	4.00
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.60
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.80
COG1857	CRISPR-Cas system type I effector complex subunit Cas7, RAMP superfamily	Defense mechanisms [V]	0.80
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.80
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.20 %
Unclassified	root	N/A	32.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.20 %
Unclassified	root	N/A	32.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.40 %
Unclassified	root	N/A	32.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.40 %
Unclassified	root	N/A	32.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.40 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.80 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.60 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.60 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.60 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.80 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.80 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.80 %
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	4.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.60 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	0.80 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.80 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.80 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.80 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.80 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	4.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.60 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.80 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.80 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.80 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.80 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.80 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	0.80 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	4.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.60 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.80 %
Desulfolutivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfolutivibrio	0.80 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.80 %
Desulfopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila	0.80 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.80 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	0.80 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.80 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	4.00 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.60 %
Desulfolutivibrio sulfoxidireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfolutivibrio → Desulfolutivibrio sulfoxidireducens	0.80 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.80 %
Desulfopila aestuarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	0.80 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.80 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.80 %
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	0.80 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10153648	Not Available	529	Open in IMG/M
3300005171\|Ga0066677_10155987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1254	Open in IMG/M
3300005180\|Ga0066685_10081447	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300005184\|Ga0066671_10078904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1767	Open in IMG/M
3300005289\|Ga0065704_10029762	Not Available	1020	Open in IMG/M
3300005332\|Ga0066388_102093653	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300005457\|Ga0070662_100569225	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300005467\|Ga0070706_101296721	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300005556\|Ga0066707_10972871	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300005561\|Ga0066699_11150656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	534	Open in IMG/M
3300005569\|Ga0066705_10771533	Not Available	575	Open in IMG/M
3300005598\|Ga0066706_10759864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	768	Open in IMG/M
3300005615\|Ga0070702_101261334	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300005764\|Ga0066903_106454572	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005764\|Ga0066903_108382269	Not Available	528	Open in IMG/M
3300005843\|Ga0068860_101358556	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300006846\|Ga0075430_100090525	All Organisms → cellular organisms → Bacteria → Acidobacteria	2559	Open in IMG/M
3300006853\|Ga0075420_101182843	Not Available	657	Open in IMG/M
3300007255\|Ga0099791_10060364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1706	Open in IMG/M
3300007255\|Ga0099791_10341035	Not Available	717	Open in IMG/M
3300007265\|Ga0099794_10088976	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300009038\|Ga0099829_10137324	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300009038\|Ga0099829_10397540	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300009038\|Ga0099829_10504345	Not Available	1005	Open in IMG/M
3300009088\|Ga0099830_10666655	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300009088\|Ga0099830_10862390	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300009089\|Ga0099828_10179266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1884	Open in IMG/M
3300009089\|Ga0099828_10463266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300009089\|Ga0099828_11270888	Not Available	652	Open in IMG/M
3300009090\|Ga0099827_10793111	Not Available	820	Open in IMG/M
3300009090\|Ga0099827_10868370	Not Available	781	Open in IMG/M
3300009100\|Ga0075418_10145453	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	2521	Open in IMG/M
3300009143\|Ga0099792_11219202	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300009156\|Ga0111538_13767721	Not Available	525	Open in IMG/M
3300009162\|Ga0075423_13156943	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300009792\|Ga0126374_11496551	Not Available	554	Open in IMG/M
3300010043\|Ga0126380_10136851	Not Available	1543	Open in IMG/M
3300010043\|Ga0126380_10345246	Not Available	1081	Open in IMG/M
3300010043\|Ga0126380_11410724	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300010043\|Ga0126380_12296912	Not Available	501	Open in IMG/M
3300010047\|Ga0126382_11004422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfolutivibrio → Desulfolutivibrio sulfoxidireducens	731	Open in IMG/M
3300010322\|Ga0134084_10379876	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300010326\|Ga0134065_10395558	Not Available	553	Open in IMG/M
3300010333\|Ga0134080_10397779	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300010336\|Ga0134071_10072868	Not Available	1596	Open in IMG/M
3300010358\|Ga0126370_11164325	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300010359\|Ga0126376_11395973	All Organisms → cellular organisms → Bacteria → Terrabacteria group	725	Open in IMG/M
3300010359\|Ga0126376_12895060	Not Available	530	Open in IMG/M
3300010360\|Ga0126372_10733462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300010360\|Ga0126372_12377675	Not Available	580	Open in IMG/M
3300010360\|Ga0126372_12742620	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300010366\|Ga0126379_11109670	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	897	Open in IMG/M
3300010366\|Ga0126379_11917470	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300010366\|Ga0126379_12049515	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010376\|Ga0126381_104212644	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300010398\|Ga0126383_11543903	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300011119\|Ga0105246_11136411	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300011270\|Ga0137391_10144200	All Organisms → cellular organisms → Bacteria → Acidobacteria	2073	Open in IMG/M
3300011271\|Ga0137393_11160510	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300012201\|Ga0137365_10407452	Not Available	1003	Open in IMG/M
3300012201\|Ga0137365_10883923	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300012201\|Ga0137365_11235422	Not Available	533	Open in IMG/M
3300012202\|Ga0137363_10123855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1998	Open in IMG/M
3300012202\|Ga0137363_10885155	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300012203\|Ga0137399_11700247	Not Available	519	Open in IMG/M
3300012209\|Ga0137379_10555244	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300012349\|Ga0137387_10273157	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300012354\|Ga0137366_10686517	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300012357\|Ga0137384_10156359	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300012359\|Ga0137385_11002454	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300012359\|Ga0137385_11240765	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300012361\|Ga0137360_10549681	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300012361\|Ga0137360_11829638	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300012362\|Ga0137361_10230358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1683	Open in IMG/M
3300012363\|Ga0137390_10499397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1190	Open in IMG/M
3300012363\|Ga0137390_11220547	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300012488\|Ga0157343_1021070	Not Available	591	Open in IMG/M
3300012925\|Ga0137419_10814456	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012929\|Ga0137404_10073716	All Organisms → cellular organisms → Bacteria	2688	Open in IMG/M
3300012929\|Ga0137404_12092889	Not Available	528	Open in IMG/M
3300012930\|Ga0137407_11288289	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300012948\|Ga0126375_10056130	Not Available	2128	Open in IMG/M
3300012948\|Ga0126375_10463867	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300012971\|Ga0126369_10191372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1964	Open in IMG/M
3300013306\|Ga0163162_10177599	Not Available	2255	Open in IMG/M
3300014263\|Ga0075324_1033201	Not Available	957	Open in IMG/M
3300015264\|Ga0137403_11626350	Not Available	500	Open in IMG/M
3300015371\|Ga0132258_10494375	All Organisms → cellular organisms → Bacteria	3058	Open in IMG/M
3300015372\|Ga0132256_100255974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1821	Open in IMG/M
3300015372\|Ga0132256_101336936	Not Available	829	Open in IMG/M
3300016319\|Ga0182033_12183467	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300016422\|Ga0182039_11143124	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300016445\|Ga0182038_11716184	Not Available	566	Open in IMG/M
3300017656\|Ga0134112_10172410	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300018053\|Ga0184626_10225785	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300018063\|Ga0184637_10054946	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300018078\|Ga0184612_10608222	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300019789\|Ga0137408_1116359	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300020170\|Ga0179594_10070904	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300020170\|Ga0179594_10330940	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300022195\|Ga0222625_1837680	Not Available	519	Open in IMG/M
3300022563\|Ga0212128_10677963	Not Available	619	Open in IMG/M
3300025157\|Ga0209399_10170273	Not Available	875	Open in IMG/M
3300026118\|Ga0207675_101055669	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300026312\|Ga0209153_1078375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1213	Open in IMG/M
3300026331\|Ga0209267_1073139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfopila → Desulfopila aestuarii	1495	Open in IMG/M
3300026552\|Ga0209577_10080124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	2687	Open in IMG/M
3300027875\|Ga0209283_10233917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300027882\|Ga0209590_10154138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1427	Open in IMG/M
3300027909\|Ga0209382_10893331	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300027961\|Ga0209853_1112143	Not Available	684	Open in IMG/M
3300030619\|Ga0268386_10024776	All Organisms → cellular organisms → Bacteria	4737	Open in IMG/M
3300030904\|Ga0308198_1029969	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300031564\|Ga0318573_10634112	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300031720\|Ga0307469_12137062	Not Available	545	Open in IMG/M
3300031740\|Ga0307468_100500379	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300031821\|Ga0318567_10299867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300032076\|Ga0306924_10327864	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300034643\|Ga0370545_020728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1102	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.80%
Host-Associated	Host-Associated	15.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	15.20%
Aquatic	Environmental → Aquatic	4.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.60%
Sediment	Environmental → Aquatic → Sediment	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.20%
Loam	Environmental → Terrestrial → Soil → Loam	4.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Sand	Environmental → Terrestrial → Soil → Sand	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	35.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_101536481	3300000858	Soil	KKAGRPKGAPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETRSTGKHKRSR*
Ga0066677_101559872	3300005171	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDGLEVQTGLNANRGMIARRALELFLETRATGTSKRSR*
Ga0066685_100814471	3300005180	Soil	ASQQKAGRPPGPPSTIVNLRLPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHATGTSVRAHGDPM*
Ga0066671_100789041	3300005184	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRSTGRSELSL*
Ga0065704_100297622	3300005289	Switchgrass Rhizosphere	QFKTDKPPQKKAGRPKGAPSTIVNLRIPLDLLAQLDRYINGLEVQTGLKANRGMIARRALELFLETHATGKSKRSW*
Ga0066388_1020936532	3300005332	Tropical Forest Soil	GAPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALELFLETRLTGKSKRSR
Ga0070662_1005692252	3300005457	Corn Rhizosphere	PPGPPSTIVNLRLPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETHATAPSGRTR*
Ga0070706_1012967212	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KGVPSTIVNLRIPVDLLAALDRYIDRLEGQTGLKANRGMIARRALALFLETHATDSSARSR*
Ga0066707_109728712	3300005556	Soil	VGRPRGAPSTIVNLRIPVALLAQLDRSIDRLEVQTGRKANRGMIARRALELFLETHTTGTSVRAL*
Ga0066699_111506561	3300005561	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRATGTSKRSR*
Ga0066705_107715332	3300005569	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDGLEVQTGLKANRGMIARRALELFLETRTPGKSKRSR*
Ga0066706_107598642	3300005598	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRATVTSKRSR*
Ga0070702_1012613342	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TAETASPPTAGRPPGPPSTIVNLRIPLDLLAQVDRYIDQLEVQTGLKANRGMITRRALALFLETQATDPRRRTL*
Ga0068859_1029929941	3300005617	Switchgrass Rhizosphere	KATPAKSVGRPSGPPSTIVNLRISLDLLGRLDRYIVHLEEQTGLRANRGMMARRALEVSLETHAD*
Ga0066903_1064545722	3300005764	Tropical Forest Soil	GRPKGPPSTIVNLRIPLDLLAQLDHYIDRLEVQTGLKANRSTIARRALALFLETRSTGKSELAL*
Ga0066903_1083822692	3300005764	Tropical Forest Soil	VNLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRAFELFLETHSPGPSQLLREGTKR*
Ga0068860_1013585561	3300005843	Switchgrass Rhizosphere	GRPPGPPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETRATDPSGCTR*
Ga0066696_110387662	3300006032	Soil	TPAKSVGRPSGPPSTIVNLRISLDLLGRLDRYIVHLEEQTGLRANRGMIARRALEVFLETHAE*
Ga0075430_1000905251	3300006846	Populus Rhizosphere	PRGVPSTIVNLRIPVDLLAALDRYIDRLEDQTGLKANRGMIVRRAVALFLETRASGPSASSL*
Ga0075420_1011828431	3300006853	Populus Rhizosphere	QKKAGRPKGAPSTIVNLRIPVDLLAQLDRYIDRLESQTGLTANRGMIARRALELFLETRATGNSQLSL*
Ga0075419_113019962	3300006969	Populus Rhizosphere	EPSPRKKAGRPPGPPSTIVNLRLPLALLARLDRYIDHLETQTGLQANRGMITRRALELFLETREAD*
Ga0099791_100603643	3300007255	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEVQTGLKANRGMIARRALALFLETHATDISARSR*
Ga0099791_103410352	3300007255	Vadose Zone Soil	VDTTPQKKAGRPPGAPSTIVNLRLPLALLAQLDRYIDQLEVQTGLKANRGMIARRALAFFLETHTTGTNTRALEGKGQ*
Ga0099794_100889763	3300007265	Vadose Zone Soil	RPKGAPSTIVNLRIPVDLLAQLDRYIDRLEVQTGLKANRGMIARRALALFLETRTTGTSAFSL*
Ga0099829_101373241	3300009038	Vadose Zone Soil	MLSLMPMPQGAPSTIVNLRIPVALLTQLDRYIDRLEVQTGLKANRGMMARRALELFLETRATGTHALAL*
Ga0099829_103975402	3300009038	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALALFLETHATGTSAC*
Ga0099829_105043452	3300009038	Vadose Zone Soil	VPSTIVNLRIPVALLAALDRSIDRLEVQTGLKAHRGMIARRAFELFLETHATDLSARSR*
Ga0099830_106666551	3300009088	Vadose Zone Soil	TAPQKKAGRPKGGPSTIINLRIPVDLLAQLDRYSDRLEVQTGLKANRGMIARRALALFLETRATDASGRTL*
Ga0099830_108623901	3300009088	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRSIDRLEGQTGLKANRGMIARRALALFLETHAPDISARSR*
Ga0099828_101792661	3300009089	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEVQTGLQANRAMIARRALALFLETHATDISARSR*
Ga0099828_104632661	3300009089	Vadose Zone Soil	QKKAGRPKGVPSTIVNLRIPVALLAELDRYIDQLEVQTGLKANRGMIARRALALFLETHAMGTNAR*
Ga0099828_112708881	3300009089	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRSIDRLEGQTGLKANRGLIARRALALFLETHATDISARSR*
Ga0099827_107931112	3300009090	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALELFLETHATDISARSR*
Ga0099827_108683701	3300009090	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDQLEVQTGLKANRGMIARRALALFLETHATGTSPRAL*
Ga0075418_101454531	3300009100	Populus Rhizosphere	GPPSTIVNLRIPVELLAQLDRYIDRLESQTGLKANRGMIARRALELFLETHLTGTSQLSL
Ga0099792_112192021	3300009143	Vadose Zone Soil	KAGRPRGAPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIVRRALALFLETRASSPSAPSL*
Ga0111538_137677211	3300009156	Populus Rhizosphere	STIVNLRIPLDLLAQLDRYIDGLEVQTGLKANRGMIARRALELFLETRATGKSKRSR*
Ga0075423_131569432	3300009162	Populus Rhizosphere	RPKGAPSTIVNLRTPVDLLAELDRYIDRLEVQTGLKANRGMIARRALELFLETHAMDTSARSR*
Ga0126374_114965511	3300009792	Tropical Forest Soil	DPTPQRKAGRPKGPPATIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALELFLETRATGKRKRSR*
Ga0126380_101368511	3300010043	Tropical Forest Soil	TIVNLRIPLDLLAQLDRYIDRLESQTGLKANRGMIARRALALFLETHLTGTSQLSL*
Ga0126380_103452462	3300010043	Tropical Forest Soil	MTDKPPQKKAGRPKGAPSTIVNLRIPLDLLARLDRYIDGLEVQTGLKANRGMIARRALALFLKTRSTGKSKRSR*
Ga0126380_114107241	3300010043	Tropical Forest Soil	STIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRGMIARRALELFLETRTTGTSTRSL*
Ga0126380_122969121	3300010043	Tropical Forest Soil	PQKKAGRPKGPPSTIVNLRIPVDLLAQLGRYIDRLEVRTGLKANRGMIARRALELFLETRSTDSSALSL*
Ga0126382_110044221	3300010047	Tropical Forest Soil	TPQRKAGRPKGPPSTIVNLRIPLDLLAQLDRYIDGLDVQTGLKANRGMIARRALELFLETRATGKRKRSL*
Ga0126382_113177461	3300010047	Tropical Forest Soil	KKATPAKSVGRPPGPPSTIVNLRISLDVLDRLDRYIVHLEEQTGLRANRGMIARRALEVFLKTHEQ*
Ga0134084_103798762	3300010322	Grasslands Soil	GPPSTIVNLRLPVDLLAQLDRYIDQLEVQTGLKSNRAMIARRALALFLETHATGTSVRAHGDPM*
Ga0134065_103955581	3300010326	Grasslands Soil	VNLRIPVALLAQLDRSIDRLEVQTGRKANRGMIARRALELFLETHTTGTSVRAL*
Ga0134080_103977791	3300010333	Grasslands Soil	PSTIVNLRIPVDLLAELDRYIDRLEVQTGLKANRGMIARRALALFLETHATDISARSR*
Ga0134071_100728682	3300010336	Grasslands Soil	KGAPSTIVNLRIPVDLLAQLDRYIDRLESQTGLKANRGMIARRALELFLETRSTGNSQLSL*
Ga0126370_111643251	3300010358	Tropical Forest Soil	SQKKAGRPKGPPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMITRRALALFLETHATDPSGRTL*
Ga0126376_113959731	3300010359	Tropical Forest Soil	PPQKKAGRPKGAPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALELFLETRSTGKSKRSR*
Ga0126376_128950601	3300010359	Tropical Forest Soil	VPSTIVNLRIPVDLLAQLDRYIDQLEDQTGLKANRAMIARRALALFLETRATGTSKRSL*
Ga0126372_107334622	3300010360	Tropical Forest Soil	PTPQKKAGRPKGPFSIIVNLRIPLDLLAQLDRYINRLEVQTGLKANRSTIARRALALFLETRSTGKSELSL*
Ga0126372_123776751	3300010360	Tropical Forest Soil	PQRKAGRPKGPPSTIVNLRIPLDLLAQLDRYIDRLEVQTGLKANRGVIARRALALFLETHATGKRKRSR*
Ga0126372_127426201	3300010360	Tropical Forest Soil	QKKAGRPKGAPSTIVNLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRSTGKRKRSR*
Ga0126379_111096701	3300010366	Tropical Forest Soil	STIVNLRIPLDLLAQLDRYIDGLEVQTGLKANRGMIARRALELFLETRSTGKSKRSR*
Ga0126379_119174702	3300010366	Tropical Forest Soil	PPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHAPGPSVRAHGDPM*
Ga0126379_120495151	3300010366	Tropical Forest Soil	ATPDHTPQKKAGRPKGPPSTIVNLRIPLDLLAQLDRYIDRLEIQTGLKANRGMIARRALELFLETRSTGKRKRSR*
Ga0126381_1042126441	3300010376	Tropical Forest Soil	GPPSTIVNLRIPVDLLAQLDRYIDQLEAQTGLKANRGMIARRALALFLESRATGTRKRSL
Ga0126383_115439032	3300010398	Tropical Forest Soil	TIVNLRIPLGLLAQLDRYIDQLEVQTGLKANRGMITRRALALFLETHATDPSGRTL*
Ga0105246_111364111	3300011119	Miscanthus Rhizosphere	PSTAETASPPTAGRPPGPPSTIVNLRIPLDLLAQVDRYIDQLEVQTGLKANRGMITRRALALFLETQATDPRRRTL*
Ga0137391_101442002	3300011270	Vadose Zone Soil	VPSTIVSLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALELFLETHATDISARSR*
Ga0137393_111605101	3300011271	Vadose Zone Soil	RPKGAPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALELFLETHATDISARSR*
Ga0137365_104074521	3300012201	Vadose Zone Soil	VNLRRPVALLAQLARSIDRLEVQTGRKANRGMIARRALELFLETHTTGTSVRAL*
Ga0137365_108839231	3300012201	Vadose Zone Soil	KKAGRPPGPPSTIVNLRIPVDLLTQLDRYIDQLEVQTGLKANRGMIARRALALFLETRATDASGRTL*
Ga0137365_112354221	3300012201	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALELFLETRATDSSARSR*
Ga0137363_101238552	3300012202	Vadose Zone Soil	VLSTIVNLRIPVDLLAELDRYIDHLEVQTGLKANRAMIARRALALFLETHATDISARSR*
Ga0137363_108851551	3300012202	Vadose Zone Soil	QKKAGRPKGAPSTIVNLRIPVGLLARLDRYIDQLEVQTGLKANRGMMARRALELFLESRATGPSTRAL*
Ga0137399_117002471	3300012203	Vadose Zone Soil	VPSTIVNFRIPVDLLAELDRYIDRLEVQTGLKANRGMIARRALALFLETHATDLSAR*
Ga0137362_104363531	3300012205	Vadose Zone Soil	MPATSVGRPPGPPSTIVNLRISLDVLDRLDRYIVHLEEQTGLRANRGMIARRALEVFLETLEQ*
Ga0137379_105552441	3300012209	Vadose Zone Soil	PGAPSTIVNLRLPVTLLAQLDRYIDRLEVQTGLKANRAMIARRALAFFLETHATDARVGAL*
Ga0137387_102731571	3300012349	Vadose Zone Soil	PQKKTGRPKDAPSTIVNLRIPMDLLAQLDRYIDQLEVQTGLKANRAMIVRRALALFLETHAAGPSVRAHGDPM*
Ga0137366_106865171	3300012354	Vadose Zone Soil	GRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETRATDTSGRTL*
Ga0137384_101563593	3300012357	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIARRALALFLETHATDISARSR*
Ga0137385_110024541	3300012359	Vadose Zone Soil	ASQHKAGRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEIQTGLKANRGMIARRALALFLETRATDASGRTL*
Ga0137385_112407652	3300012359	Vadose Zone Soil	GRPKGAPSTIVNLRIPMDLLAQLDRYIDRLEVQTGLKANRGMIARRALALFLETHATDISAR*
Ga0137360_105496811	3300012361	Vadose Zone Soil	GVLSTIVNLRIPVDLLAELDRYIDHLEVQTGLKANRAMIARRALALFLETHATDISARSR
Ga0137360_118296381	3300012361	Vadose Zone Soil	NLRLPVALLAQLDRYIDRLEVQTGLKANRGMIARRALALFLETHATDLSAR*
Ga0137361_102303583	3300012362	Vadose Zone Soil	APSTIINLRIPMDLLAQLDRYIDHLEVQTGLKANRAMITRRALALFLETRAPGAHIDAL*
Ga0137390_104993972	3300012363	Vadose Zone Soil	MPVDLLAELDRYIDRLESQTGLKANRGMIVRRAVALFLETRAADPSAPSL*
Ga0137390_112205472	3300012363	Vadose Zone Soil	SKAAPTPQKQAGRPKGVPSTIVNLRIPVDLLAELDRYIDQLEVQTGLKANRGMIARRALELFLETRASRKTGR*
Ga0157343_10210701	3300012488	Arabidopsis Rhizosphere	VNLRIPVALLAQLDRYIDRLEVQTGRKANRGMIARRALELFLETHTTRTSVRAL*
Ga0137419_108144562	3300012925	Vadose Zone Soil	QGAPSTIINLRIPMDLLAQLDRYIDHLEVQTGLKANRAMIARRAFALFLETRAPGAPIDAL*
Ga0137404_100737162	3300012929	Vadose Zone Soil	VPSTIVNLRLPVDLLAQLDRYIDRLESETGLKANRGMIARRALARFLETRSTGNSQLAL*
Ga0137404_120928892	3300012929	Vadose Zone Soil	GRPKGAPSTIVNLRIPVDLLAQLDRYIDRLEVQTGLKANRGMIAHRAFELFLETH*
Ga0137407_112882891	3300012930	Vadose Zone Soil	KAGRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHAPGTSVRAHGDPR*
Ga0126375_100561301	3300012948	Tropical Forest Soil	MPDKPPQKKAGRPKGAPSTIVNLRIPLDLLAQLDRYIDQLEVQTGLKANRGMIARRALELFLETRSTGKSKRSR*
Ga0126375_104638672	3300012948	Tropical Forest Soil	PSTIVNLRIPLDLLAQLDRYIDQLEGQTGLKANRGMIARRALALFLETRATAPSGRTQ*
Ga0126369_101913721	3300012971	Tropical Forest Soil	TIVNLRIPLDLLAQLDRYINRLEVQTGLKANRSTIARRALALFLETRSTGKSELSL*
Ga0163162_101775994	3300013306	Switchgrass Rhizosphere	PPGPPSTIVNLRIPLDLLAQLDRSIDQLEVQTGLKANRGMIARRALALFLETRATDPSGRTL*
Ga0075324_10332011	3300014263	Natural And Restored Wetlands	RGGRPKGPPSTILNLRIPLDLLERLDRYLDHLEVQTGLKANRGMIARRAIDLFLETHAPAKRKSKRRRS*
Ga0157379_106375841	3300014968	Switchgrass Rhizosphere	TKATPAKSVGRPSGPPSTIVNLRISLDLLGRLDRYIVHLEEQTGLRANRGMMARRALEVSLETHAD*
Ga0137403_116263502	3300015264	Vadose Zone Soil	VPSTIVNLRIPVDLLAELDRYIDRLEVQTGLKANRGMIARRALELFLETHAMDTSARSR*
Ga0132258_104943754	3300015371	Arabidopsis Rhizosphere	MAAQTKAGRPPGPPATIVNLRIPVGLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHATGTSVRAHGDPL*
Ga0132256_1002559743	3300015372	Arabidopsis Rhizosphere	VNLRIPVALLAQLDRYIDRLEVQTGRKANRGMVARRALELFLETHTTRTSVRAL*
Ga0132256_1013369361	3300015372	Arabidopsis Rhizosphere	MAAQTKAGRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHATGTS
Ga0182033_121834671	3300016319	Soil	PGPPSTIVNLRLPVDLLAQLDRYIDQLEAQTGLKANRGMIARRALALFLESRATGTSKRS
Ga0182039_111431242	3300016422	Soil	STIVNLRIPLDLLAQLDRYIDRLEIQTGLKANRGMIARRALELFLETRSTGKSKRSR
Ga0182038_117161841	3300016445	Soil	GPPSTIVNLRIPVALLAQLDRYIDRLESQTGLKANRGMIARRALELFLETRSTGNSQLAL
Ga0134112_101724101	3300017656	Grasslands Soil	PPSSTDTTPQTKAGRPPGPPSTIVNLRLPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHATGTSVRAHGDPM
Ga0184626_102257851	3300018053	Groundwater Sediment	RGAPSTIVNLRIPVALLAQLDRSIDRLEVQTGRKANRGMIARRALELFLETHATGTSVRA
Ga0184637_100549461	3300018063	Groundwater Sediment	PTPQKKVGRPKEVPSTIVNLRIPVDLLAELDRYIDRLEVQTGLKANRGMIARRALALFLETHATDLSARSR
Ga0184612_106082221	3300018078	Groundwater Sediment	PSTIVNLRIPVALLAQLDRYIDRLEVQTGRKANRGMIARRALALFLETHATDISARSR
Ga0137408_11163592	3300019789	Vadose Zone Soil	IASQQKAGRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRAMIARRALALFLETHAPGTSVRAHGDPR
Ga0179594_100709041	3300020170	Vadose Zone Soil	PPGPPSTLVNLRIPVDLLAQLDRSIDQLEVQTGLKANRGMIARRALALFLETRATDTSGRTL
Ga0179594_103309402	3300020170	Vadose Zone Soil	RPQGAPSTIINLRIPMDLLAQLDRYIDHLEVQTGLKANRAVIARRALALFLETRATDVHIDAL
Ga0222625_18376801	3300022195	Groundwater Sediment	RPKGAPSTIVNLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALEYFLETRTPDQRERTPEGTNR
Ga0212128_106779631	3300022563	Thermal Springs	DNTPPKTVGRPPGAPSTIINLRIPLDLLHRLDRYLDQLEGHTGLKANRGMIARRALELFLETHATGESEPDT
Ga0209399_101702731	3300025157	Thermal Springs	GRPPGPPSTIINLRLPVDLLAQLDRYIDRLEVQTGLKANRGMIARRALALFLETRLPGTSEREP
Ga0207675_1010556692	3300026118	Switchgrass Rhizosphere	GRPPGPPSTIVNLRIPLDLLAQLDRSIDQLEVQTGLKTNRGMIARRALALFLETRATDPSGCTR
Ga0209153_10783751	3300026312	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLET
Ga0209267_10731393	3300026331	Soil	STIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETRATDASGRTL
Ga0209577_100801241	3300026552	Soil	MGAISYQKIFASALINLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRATGTSKRSR
Ga0209283_102339171	3300027875	Vadose Zone Soil	NLRIPVDLLAQLDRYIDQLEVQTGLTANRGMIARRALALFLETHATGTSVRAHGDSR
Ga0209590_101541381	3300027882	Vadose Zone Soil	KSRSPARAPSTIVNLRIPVDLLAELDRYIDRLEGQTGLKANRGMIVRRALALFLETRASSPSAPSL
Ga0209382_108933311	3300027909	Populus Rhizosphere	QKKAGRPRGVPSTIVNLRIPVDLLAALDRYIDRLEDQTGLKANRGMIVRRAVALFLETRASGPSASSL
Ga0209853_11121431	3300027961	Groundwater Sand	APSTIVNLRIPLDLLARLDRYIDRLEVQTGLKANRGMIARRALACFLETRTPDQRERKPEGTNR
Ga0268386_100247761	3300030619	Soil	PSTILNLRIPLDLLERLDRYLDHLEVQTGLKANRGMIARRAIDLFLETHAPAKRKSKRRR
Ga0308198_10299691	3300030904	Soil	PKGVSSTIVNLRIPVDLLAELDRYIDRLEVQTGLKAHRGMIARRAFALFLETHATDISARSR
Ga0318573_106341121	3300031564	Soil	TIVNLRIPLGLLAQLDRSIDQLEVQTGLKANRGMITRRALALFLETHATDPSGRTL
Ga0307469_121370621	3300031720	Hardwood Forest Soil	AEAASQHKAGRPPGPPSTIVNLRIPVDLLAQLDRYIDQLEVQTGLKANRGMIARRALALFLETHATDPRGRTL
Ga0307468_1005003791	3300031740	Hardwood Forest Soil	GQQSSADHTLQKKAGRPKGAPSTIVNLRIPVDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETH
Ga0318567_102998672	3300031821	Soil	TIVNLRIPVALLAQLDRYIDRLESQTGLKANRGMIARRALELFLETRSTGNSQLAL
Ga0306924_103278645	3300032076	Soil	KAGRPKGPPSTIVNLRIPLDLLAQLDRYIDRLEVQTGLKANRGMIARRALELFLETRSTGKSKRSR
Ga0370545_020728_246_440	3300034643	Soil	MPSTIVNLRIPVDLLARLDRYIDRLEVQTGLKANRGMIARRALACFLETRTPDQRERKPEGTNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067489

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences