NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067486

Metagenome / Metatranscriptome Family F067486

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067486
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 53 residues
Representative Sequence MGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKAKEAA
Number of Associated Samples 97
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.80 %
% of genes near scaffold ends (potentially truncated) 34.40 %
% of genes from short scaffolds (< 2000 bps) 74.40 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(20.800 % of family members)
Environment Ontology (ENVO) Unclassified
(31.200 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.800 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.80%    β-sheet: 0.00%    Coil/Unstructured: 96.20%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.13
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00005ABC_tran 6.40
PF12399BCA_ABC_TP_C 4.80
PF02885Glycos_trans_3N 4.80
PF00528BPD_transp_1 4.80
PF01209Ubie_methyltran 3.20
PF13559DUF4129 3.20
PF00132Hexapep 3.20
PF00814TsaD 3.20
PF01113DapB_N 2.40
PF07685GATase_3 2.40
PF00498FHA 2.40
PF05173DapB_C 2.40
PF00549Ligase_CoA 2.40
PF08353MurT_C 2.40
PF05193Peptidase_M16_C 2.40
PF08245Mur_ligase_M 1.60
PF00561Abhydrolase_1 1.60
PF12697Abhydrolase_6 1.60
PF00121TIM 1.60
PF08241Methyltransf_11 1.60
PF00069Pkinase 1.60
PF02653BPD_transp_2 1.60
PF08442ATP-grasp_2 1.60
PF13439Glyco_transf_4 1.60
PF00149Metallophos 1.60
PF16697Yop-YscD_cpl 1.60
PF00348polyprenyl_synt 1.60
PF00290Trp_syntA 0.80
PF02367TsaE 0.80
PF03721UDPG_MGDP_dh_N 0.80
PF02875Mur_ligase_C 0.80
PF00082Peptidase_S8 0.80
PF01012ETF 0.80
PF14602Hexapep_2 0.80
PF02518HATPase_c 0.80
PF00781DAGK_cat 0.80
PF07690MFS_1 0.80
PF13539Peptidase_M15_4 0.80
PF13977TetR_C_6 0.80
PF13442Cytochrome_CBB3 0.80
PF01494FAD_binding_3 0.80
PF00117GATase 0.80
PF00764Arginosuc_synth 0.80
PF00766ETF_alpha 0.80
PF02441Flavoprotein 0.80
PF02424ApbE 0.80
PF00578AhpC-TSA 0.80
PF00583Acetyltransf_1 0.80
PF00534Glycos_transf_1 0.80
PF01979Amidohydro_1 0.80
PF16177ACAS_N 0.80
PF01225Mur_ligase 0.80
PF00106adh_short 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 6.40
COG0045Succinyl-CoA synthetase, beta subunitEnergy production and conversion [C] 4.00
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 3.20
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 3.20
COG1214tRNA A37 threonylcarbamoyladenosine modification protein TsaBTranslation, ribosomal structure and biogenesis [J] 3.20
COG0769UDP-N-acetylmuramyl tripeptide synthaseCell wall/membrane/envelope biogenesis [M] 3.20
COG0533tRNA A37 threonylcarbamoyltransferase TsaDTranslation, ribosomal structure and biogenesis [J] 3.20
COG0458Carbamoylphosphate synthase large subunitAmino acid transport and metabolism [E] 3.20
COG02894-hydroxy-tetrahydrodipicolinate reductaseAmino acid transport and metabolism [E] 2.40
COG0074Succinyl-CoA synthetase, alpha subunitEnergy production and conversion [C] 2.40
COG0026Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)Nucleotide transport and metabolism [F] 1.60
COG2025Electron transfer flavoprotein, alpha subunit FixBEnergy production and conversion [C] 1.60
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 1.60
COG1042Acyl-CoA synthetase (NDP forming)Energy production and conversion [C] 1.60
COG0142Geranylgeranyl pyrophosphate synthaseCoenzyme transport and metabolism [H] 1.60
COG0151Phosphoribosylamine-glycine ligaseNucleotide transport and metabolism [F] 1.60
COG0149Triosephosphate isomeraseCarbohydrate transport and metabolism [G] 1.60
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.60
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.80
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.80
COG0159Tryptophan synthase alpha chainAmino acid transport and metabolism [E] 0.80
COG2086Electron transfer flavoprotein, alpha and beta subunitsEnergy production and conversion [C] 0.80
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.80
COG1477FAD:protein FMN transferase ApbEPosttranslational modification, protein turnover, chaperones [O] 0.80
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.80
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.80
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.80
COG0802tRNA A37 threonylcarbamoyladenosine biosynthesis protein TsaETranslation, ribosomal structure and biogenesis [J] 0.80
COG0773UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl familyCell wall/membrane/envelope biogenesis [M] 0.80
COG0770UDP-N-acetylmuramyl pentapeptide synthaseCell wall/membrane/envelope biogenesis [M] 0.80
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.80
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.80
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.00 %
UnclassifiedrootN/A16.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459019|G14TP7Y02G88HEAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium614Open in IMG/M
3300000156|NODE_c0742642All Organisms → cellular organisms → Bacteria15899Open in IMG/M
3300000956|JGI10216J12902_102228363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1226Open in IMG/M
3300000956|JGI10216J12902_105551686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium798Open in IMG/M
3300000956|JGI10216J12902_110411143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1750Open in IMG/M
3300004463|Ga0063356_101168038All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300005166|Ga0066674_10144966All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300005167|Ga0066672_10620584All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria700Open in IMG/M
3300005168|Ga0066809_10013595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1570Open in IMG/M
3300005172|Ga0066683_10041421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2694Open in IMG/M
3300005172|Ga0066683_10514812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium731Open in IMG/M
3300005172|Ga0066683_10752015All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005180|Ga0066685_10871596All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300005187|Ga0066675_10017622All Organisms → cellular organisms → Bacteria3955Open in IMG/M
3300005187|Ga0066675_10315779All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300005334|Ga0068869_100271919All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300005338|Ga0068868_100682179Not Available917Open in IMG/M
3300005468|Ga0070707_102006832Not Available546Open in IMG/M
3300005540|Ga0066697_10718975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria546Open in IMG/M
3300005553|Ga0066695_10667367Not Available614Open in IMG/M
3300005556|Ga0066707_10634155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300005559|Ga0066700_10025235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3395Open in IMG/M
3300005559|Ga0066700_10407711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium958Open in IMG/M
3300005560|Ga0066670_10745577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria593Open in IMG/M
3300005574|Ga0066694_10427411All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005587|Ga0066654_10741941All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005614|Ga0068856_101800813Not Available624Open in IMG/M
3300005719|Ga0068861_100446817All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300005844|Ga0068862_102024678All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300006031|Ga0066651_10451674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales682Open in IMG/M
3300006046|Ga0066652_100538108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales1092Open in IMG/M
3300006046|Ga0066652_101002948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium792Open in IMG/M
3300006852|Ga0075433_11036878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300006854|Ga0075425_101758829Not Available697Open in IMG/M
3300006854|Ga0075425_102270249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria603Open in IMG/M
3300006871|Ga0075434_100710104All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300006903|Ga0075426_11482020All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006904|Ga0075424_100384556Not Available1496Open in IMG/M
3300007076|Ga0075435_100061951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3036Open in IMG/M
3300007076|Ga0075435_100459174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1099Open in IMG/M
3300009012|Ga0066710_100986348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1300Open in IMG/M
3300009012|Ga0066710_103803578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium566Open in IMG/M
3300009036|Ga0105244_10075175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1679Open in IMG/M
3300009162|Ga0075423_10630663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1130Open in IMG/M
3300009162|Ga0075423_12689115Not Available544Open in IMG/M
3300009840|Ga0126313_10152414All Organisms → cellular organisms → Bacteria1747Open in IMG/M
3300009840|Ga0126313_10576749All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300010041|Ga0126312_10327121Not Available1084Open in IMG/M
3300010041|Ga0126312_11287160Not Available541Open in IMG/M
3300010145|Ga0126321_1448212All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300010301|Ga0134070_10302608Not Available610Open in IMG/M
3300010333|Ga0134080_10135826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales1034Open in IMG/M
3300010337|Ga0134062_10559453Not Available583Open in IMG/M
3300011003|Ga0138514_100159143All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012201|Ga0137365_10119025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1986Open in IMG/M
3300012201|Ga0137365_10175648All Organisms → cellular organisms → Bacteria1605Open in IMG/M
3300012204|Ga0137374_10053630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4122Open in IMG/M
3300012206|Ga0137380_11053188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium694Open in IMG/M
3300012206|Ga0137380_11744398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300012207|Ga0137381_10209900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1688Open in IMG/M
3300012350|Ga0137372_10019175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium6438Open in IMG/M
3300012350|Ga0137372_10024305All Organisms → cellular organisms → Bacteria5631Open in IMG/M
3300012350|Ga0137372_10053510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3554Open in IMG/M
3300012353|Ga0137367_10011489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7063Open in IMG/M
3300012354|Ga0137366_10414890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium979Open in IMG/M
3300012356|Ga0137371_10204859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1544Open in IMG/M
3300012356|Ga0137371_10297906All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300012356|Ga0137371_10697292Not Available777Open in IMG/M
3300012356|Ga0137371_10852267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria693Open in IMG/M
3300012360|Ga0137375_11280039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria555Open in IMG/M
3300012897|Ga0157285_10023171All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300012975|Ga0134110_10613395Not Available506Open in IMG/M
3300012977|Ga0134087_10612549Not Available565Open in IMG/M
3300013306|Ga0163162_12323963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300014157|Ga0134078_10505529All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300015357|Ga0134072_10406740Not Available538Open in IMG/M
3300015359|Ga0134085_10378888All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300017939|Ga0187775_10032676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1503Open in IMG/M
3300017966|Ga0187776_10049636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2384Open in IMG/M
3300018027|Ga0184605_10011159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3435Open in IMG/M
3300018061|Ga0184619_10074415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1504Open in IMG/M
3300018071|Ga0184618_10000768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7583Open in IMG/M
3300018071|Ga0184618_10270440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium721Open in IMG/M
3300018071|Ga0184618_10271840Not Available719Open in IMG/M
3300018433|Ga0066667_10971311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium732Open in IMG/M
3300018482|Ga0066669_11418103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
3300019356|Ga0173481_10005405All Organisms → cellular organisms → Bacteria3412Open in IMG/M
3300020022|Ga0193733_1153874All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300021080|Ga0210382_10019473Not Available2434Open in IMG/M
3300021080|Ga0210382_10522764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300022880|Ga0247792_1002868All Organisms → cellular organisms → Bacteria2448Open in IMG/M
3300022898|Ga0247745_1027230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium840Open in IMG/M
3300023057|Ga0247797_1016285Not Available929Open in IMG/M
3300025901|Ga0207688_10097548All Organisms → cellular organisms → Bacteria1694Open in IMG/M
3300026118|Ga0207675_100019827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora6276Open in IMG/M
3300026315|Ga0209686_1044399All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300026327|Ga0209266_1034726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2631Open in IMG/M
3300026342|Ga0209057_1017078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4218Open in IMG/M
3300026547|Ga0209156_10026857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter3334Open in IMG/M
3300026552|Ga0209577_10229154All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300027909|Ga0209382_10515281All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300028711|Ga0307293_10022658All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300028715|Ga0307313_10013438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2132Open in IMG/M
3300028722|Ga0307319_10000154All Organisms → cellular organisms → Bacteria21738Open in IMG/M
3300028768|Ga0307280_10047063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1339Open in IMG/M
3300028784|Ga0307282_10000439All Organisms → cellular organisms → Bacteria13140Open in IMG/M
3300028784|Ga0307282_10049432All Organisms → cellular organisms → Bacteria1875Open in IMG/M
3300028787|Ga0307323_10076279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1194Open in IMG/M
3300028793|Ga0307299_10156949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria857Open in IMG/M
3300028799|Ga0307284_10026465All Organisms → cellular organisms → Bacteria1909Open in IMG/M
3300028807|Ga0307305_10012943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3691Open in IMG/M
3300028819|Ga0307296_10003642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales7969Open in IMG/M
3300028828|Ga0307312_10072529All Organisms → cellular organisms → Bacteria2091Open in IMG/M
3300028828|Ga0307312_10239417Not Available1172Open in IMG/M
3300028878|Ga0307278_10058253All Organisms → cellular organisms → Bacteria1745Open in IMG/M
3300028881|Ga0307277_10002329All Organisms → cellular organisms → Bacteria7363Open in IMG/M
3300028884|Ga0307308_10000067All Organisms → cellular organisms → Bacteria28553Open in IMG/M
3300028884|Ga0307308_10007895All Organisms → cellular organisms → Bacteria4654Open in IMG/M
3300028884|Ga0307308_10076986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1579Open in IMG/M
3300031421|Ga0308194_10101000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria829Open in IMG/M
3300031421|Ga0308194_10378269Not Available511Open in IMG/M
3300032075|Ga0310890_10025889All Organisms → cellular organisms → Bacteria3086Open in IMG/M
3300032205|Ga0307472_100142728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1735Open in IMG/M
3300032770|Ga0335085_10178287All Organisms → cellular organisms → Bacteria2628Open in IMG/M
3300033004|Ga0335084_10063047All Organisms → cellular organisms → Bacteria3832Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.40%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.00%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.40%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.60%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.60%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.80%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.80%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.80%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459019Litter degradation MG4EngineeredOpen in IMG/M
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009036Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300022898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5EnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4MG_045704202170459019Switchgrass, Maize And Mischanthus LitterMKCHVGEGVMGNREVPRIEILARRADLSGASGKARIEEEGGSWGKHGFPHANEPKARENV
NODE_074264223300000156Sugar Cane Bagasse Incubating BioreactorVSGREKGVMGNREVPRIEILSTRADLRGAGAEASPGTEGGSWGEH
JGI10216J12902_10222836333300000956SoilVSGCVEGVMGNREVPRIEILRLRADLSGARAEASPEEEGGSWGKHGFP
JGI10216J12902_10555168623300000956SoilMRGCGEGVMGNREVPRIDLLRLRADLRGARAEESPEEEGGSWGKHGFP
JGI10216J12902_11041114323300000956SoilMGNREVPRIEILRLRAHPRGALVEACPEEEGGSRGKHGFPRATEPEAEEAA*
Ga0063356_10116803823300004463Arabidopsis Thaliana RhizosphereMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRATEPEAEEAATQ*
Ga0066674_1014496623300005166SoilVSGCVEGVMGNREVPRIEILRLRAHPRGALAEACPEEEEGGSRGKHGFPRATEPEAEGAA
Ga0066672_1062058423300005167SoilVSGGVEGVTGNREVPRIEILRPRADLRGARPEANSEKEGGSAGKHGFPHATEPEAKEAKT
Ga0066809_1001359523300005168SoilVSGRVEGVMGNREVPRIEVLGGRADLRGASSGASLEEEGGSRGKHGFPRATELRAKEQKR
Ga0066683_1004142113300005172SoilMGNREVPRIAIFRLRAHLRGAQPEACQEEEEGGSWGKHGFPHATEPKAKEEA*
Ga0066683_1051481223300005172SoilNREVPRIAIFRLRAHLRGAQPEACQEEEEEEGGSWGKHGFPHATEPKAKEEA*
Ga0066683_1075201523300005172SoilVSGCGEGVMGNREVPRIAIFSLRAHLRGARAEACLEEEGGSRGKHGFPRATEPKAKEAA*
Ga0066685_1087159623300005180SoilMGNREVPRIAIFRLRAHLRGAQPEACQEEEEEEGGSWGKHGFPHA
Ga0066675_1001762223300005187SoilMGNREVPRIEILRLRAHLRGARAEACLEEEGGSRGKHGFPRATEPEAEEPA*
Ga0066675_1031577923300005187SoilVSGGVEGVTGNPEVPRIEILRPLADLRDAWPEASSEEEVGSWKKHGFPHATEPEAKEAGT
Ga0068869_10027191913300005334Miscanthus RhizosphereMGNREVPRIEILARRADLSGASGKARIEEEGGSWGKHGFPH
Ga0068868_10068217923300005338Miscanthus RhizosphereMGNREVPRIEILARRADLGGASGKARIEEEGGSWGKHGFPHA
Ga0070707_10200683223300005468Corn, Switchgrass And Miscanthus RhizosphereVSGDVEGVMGNREVPRIGLLRLRAHLRGALAEACPEEEGGSRGKPGFPRAT
Ga0066697_1071897523300005540SoilVKRGVEGVMGNREVPRIEILRLRAHSRGALAEACPEEEGGSRGKHGFPRATEPEAEEAA*
Ga0066695_1066736713300005553SoilEGVMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKVKERKA*
Ga0066707_1063415523300005556SoilMGNREVPAIEILILRAHSGGSQAEASSEEEGGSRGKHGFP
Ga0066700_1002523543300005559SoilMGNREVPRIAVLSLRADLRGAQAEACAGEEGGSRGKHGFPRATEPKGKEAA*
Ga0066700_1040771123300005559SoilVKRGVEGVMGNREVPRSAILSQRGDLGGALAEACSGEEGGSRGKHGFPRAAEPKAEEAA*
Ga0066670_1074557723300005560SoilVSGGVEGVTGNPEVPRIEILRPLADLRDAWPEASSEEEVGSWKKHGFPQATEPEAKEAGT
Ga0066694_1042741123300005574SoilVKRGGEGVMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKAKEAA*
Ga0066654_1074194123300005587SoilVKRGVEGVMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKAKEAA*
Ga0068856_10180081323300005614Corn RhizosphereMKCHVGEGVMGNREVPRIGILRLRAHPLSALAEACSEEEGGSRGKHGFPR
Ga0068861_10044681713300005719Switchgrass RhizosphereGEGVMGNREVPRIEILARRADLSGASGKARIEEEEGSWGKHGFPHANEPKARENVA*
Ga0068862_10202467823300005844Switchgrass RhizosphereMGNREVPRIETLRARADLRGARAEACPGEEGGSWGKHGFPHATEPQAREAA*
Ga0066651_1045167423300006031SoilMSGCGEGVMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKVKERKA
Ga0066652_10053810823300006046SoilMGNREVPRIAIFSLRAHLRGARAEACLEEEGGSRGKHGFPRATEPKAKEAA*
Ga0066652_10100294813300006046SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGK
Ga0075433_1103687823300006852Populus RhizosphereIEIHRLGAGPRATLTEANSEEEGGTRGKLGFPCATEPEAEEAA*
Ga0075425_10175882913300006854Populus RhizosphereMGNREVPRIEILRLGAGPRATLTEANSEEEGGTRGKHGFPRATEPEAEEAA*
Ga0075425_10227024923300006854Populus RhizosphereKSRVKRGGERVMGNREVPRIEILRLGAGPRATLTEANSEEEAGTRGKHGFPRATEPEAEEAA*
Ga0075434_10071010423300006871Populus RhizosphereMGNREVPRIEIHRLGAGPRATLTEANSEEEAGTRGKHGFPRATEPEAEEAA*
Ga0075426_1148202023300006903Populus RhizosphereVSGCVEGIMGNREVPRIEILRLGAGPRATLTEANSEEEGGTRGKHGFPRATEPEAEEAA*
Ga0075424_10038455613300006904Populus RhizosphereMGNREVPRIEIHRLGAGPRATLTDANSEEEGGTRGKHG
Ga0075435_10006195143300007076Populus RhizosphereMGNREVPRIEILRLGAGPRATLTEANSEEEGGTRGKLGFPCATEPEAEEAA*
Ga0075435_10045917423300007076Populus RhizosphereMGNREVPRIEILGLRAHLRGALAEACPEEEGGSWGKHGFPHATEPKAEEVE*
Ga0066710_10098634823300009012Grasslands SoilVSGGVEGVTGNPEVPRIEILRPLADLRDAWSEASSEEEVGSWKKHGFPHATEPEAKEAGT
Ga0066710_10380357813300009012Grasslands SoilVKRGGEGVMGNREVPRIEILRLRAHPQGALAEACPEEEGGSRGKHGFPRATEPEAEGAA
Ga0105244_1007517523300009036Miscanthus RhizosphereMKCHVGEGVMGNREVPRIEILARRADLSGASGKARIEEEGGSWGKHGFPHANEPKARENVA*
Ga0075423_1063066333300009162Populus RhizospherePRIEILRLGAGPRATLTEANSEEEGGTRGKHGFPRATEPEAEEAA*
Ga0075423_1268911523300009162Populus RhizosphereVKRGGERVMGNREVPRIEILRLGAGPRATLTEANSEEEGGTRGKHGFPRATEPEAREAA*
Ga0126313_1015241423300009840Serpentine SoilMGNREVPRIAILSARADLRGARAVAYLEEEGGSRGKHGFPRATEPKAEEAG*
Ga0126313_1057674923300009840Serpentine SoilMKCRVVEGVMGNREVPRIGISVPRADLRGAWDGASTGEEGGPRGKHGFPRATEPKEHVA*
Ga0126312_1032712113300010041Serpentine SoilMGNREVPRIAILSARADLRGARAVAYLEEEEGSRGKHGFPRATEPKAEEAG*
Ga0126312_1128716023300010041Serpentine SoilMKCHVVEGVMGNREVPRIGLLRARADMGGAGSEASTKREGGSRGKHGFLRATEPQAKEHVA*
Ga0126321_144821223300010145SoilMGNREGPRIEILRLRAYLRGALAEASPGEEGGSWGKHGFPRATEPKAEEAA*
Ga0134070_1030260823300010301Grasslands SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKPGFPRATEPEAEE
Ga0134080_1013582623300010333Grasslands SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKAKEAA*
Ga0134062_1055945313300010337Grasslands SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHGFPRATEPKVKERKA*
Ga0138514_10015914323300011003SoilGEGVMGNREVPRIEILSLRAHLRGALAEASSEEEGGSRGKHGFPRATEPKAKEGAA*
Ga0137365_1011902533300012201Vadose Zone SoilMKCGGEGVMGNREVPRIGILRLRAHSRGALAEACPKEEGGSRGKHGFPRATEPKAEEAA*
Ga0137365_1017564833300012201Vadose Zone SoilWGGGVMGTREVPRNAFLRPGANLGGALTEACQEEEGGPRGKHGFPRATEPEAEEAAA*
Ga0137374_1005363033300012204Vadose Zone SoilMGNREVPRIEILRLRADLRGAQAEACAEEERGSWGKHGFPHATEPEAKEAAA*
Ga0137380_1105318823300012206Vadose Zone SoilMKCGGEGAMGNREVPRIGILRLRAHSRGALAEACPKEEGGSRGK
Ga0137380_1174439813300012206Vadose Zone SoilMGNREVPRIEILRLRAHLRGARAEATLEEEGGARGRHGFPREGKPKASE
Ga0137381_1020990033300012207Vadose Zone SoilMKCGGEGVMGNREVPRIGILRLRAHSRGALAEACPTEEGGSRGKHGFPRATEPEAEEAA*
Ga0137372_10019175103300012350Vadose Zone SoilVSGCGEGVMGNREVPRIEILRLRADLRGAQAEACAEEERGSWGKHGFPHATEPEAKEAAA
Ga0137372_1002430533300012350Vadose Zone SoilMGNREVPRIAFLRLRAHLWGALTEACPEEEGGPRGKHGFPRATEPEAEEAAA*
Ga0137372_1005351063300012350Vadose Zone SoilVSGRVEGVMGNREVPRIAILGARADLRGACSVATREEEGGPWGKHGFLHATEPEAREVMA
Ga0137367_1001148973300012353Vadose Zone SoilMGNREVPRIEILRLRADLRGAQAEACAEEEGGSWGKHGFPHATKPEAKEAAA*
Ga0137366_1041489033300012354Vadose Zone SoilVSGCGEGVMGNREVPRIAFLRLRAHLWGALTEACPEEEGGPRGKHGFPRATEPEAEEAAA
Ga0137371_1020485933300012356Vadose Zone SoilMKCGGEGVMGNREVPRIGILRLRAHSRGALTEACPEEEGGPRGKHGF
Ga0137371_1029790623300012356Vadose Zone SoilMSGCGEGVMGNREVPRIAFLRLRAHLWGALTEACPEEEGGPRGKHGFPRATEPEAEEAAA
Ga0137371_1069729223300012356Vadose Zone SoilMKWHVGEGVMGNREVLRIGIVGPRADPGGARAEVNLEEEGGSRGKHGFPRATEPQAREHMA*
Ga0137371_1085226713300012356Vadose Zone SoilILRLRAPPGGAVAGASPEEEGGWGGKHGSPHATEPKAKEAA*
Ga0137375_1128003923300012360Vadose Zone SoilMSGCGEGVMGNREVPRIAFLRLRAHLWGALTEACPEEEGGPRGKHGFPRATEPE
Ga0157285_1002317123300012897SoilMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRETEPEAEEAATQ*
Ga0134110_1061339523300012975Grasslands SoilMKCGGEGVMGNREVPRIEILRLRAHSRGALAEACPEEEGGSRGKHGFPR
Ga0134087_1061254913300012977Grasslands SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHDFPRATEPKVKERKA*
Ga0163162_1232396313300013306Switchgrass RhizosphereMGNREVPRIEILRARADLRAWAEASPGEEGGSRGKH
Ga0134078_1050552923300014157Grasslands SoilMGNREVPRIAIFRLRAHLRGAQPEACQEEEEGGSWGKHGFPHA
Ga0134072_1040674023300015357Grasslands SoilVSGGVEGVTGKPEVPRIEILRPLADLRDAWPEASSEEEVGSWKKHGFPHATEPEAKEAGT
Ga0134085_1037888823300015359Grasslands SoilGVMGNREVPRIAIFSLRAHLRGARAEACLEEEGGSRGKHGFPRATEPKAKEAA*
Ga0187775_1003267633300017939Tropical PeatlandMSGLGEGVMGNREVPRIDFLRPRADLSGVWSEASLEKEGGSWGKHGFPHASEPEVREKAA
Ga0187776_1004963623300017966Tropical PeatlandMGNREVPRIDFLRPRADLSGVWSEASLEKEGGSWGKHGFPHASEPEVREKAA
Ga0184605_1001115963300018027Groundwater SedimentMGNREVPRIEILRLRAHPGGALAEACSEEEGGSWGKHGFPHA
Ga0184619_1007441523300018061Groundwater SedimentVSGCVEGVMGNRKVPWIEILRLRAHLRGVQAEPRLEEEGGSRGKPGFPCATEPEAEEAE
Ga0184618_1000076853300018071Groundwater SedimentMGNRKVPWIEILRLRAHLRGVRAEPRLEEEGGSRGKPGFPCATEPEAEEAE
Ga0184618_1027044023300018071Groundwater SedimentVSGCVEGVMGNREVPRIEILRLRAHLRGARAEASTEEEGGSWGKHGFPHATEPEAEEAA
Ga0184618_1027184013300018071Groundwater SedimentMGNREVPRIAILRLRADLRGARAEASLEEEGGSWGKHG
Ga0066667_1097131113300018433Grasslands SoilVSGDGEGVMGNREVPRIEILRLRAHLRGARAEATLEEEGGARGRHGFPRESKPKASE
Ga0066669_1141810313300018482Grasslands SoilMGNREVPRIEILRLRAHPRGALAEACPEEEGGSRGKHG
Ga0173481_1000540533300019356SoilMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRETEPEAEEAATQ
Ga0193733_115387423300020022SoilVSGHVEGVMGNREVPRIEILRLRAHPGGALAEACSEEEGGSWGKHGFPHATEPEAEEAA
Ga0210382_1001947333300021080Groundwater SedimentVSGCVEGVMGNRKVPWIEILRLRAHLRGVRAEPRLEEEGGSRGKPGFPCATEPEAEEAE
Ga0210382_1052276423300021080Groundwater SedimentMGNREVPRIEILRLRAHLRGARAEASTEEEGGSWGKHGFPHATEPEAE
Ga0247792_100286833300022880SoilMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRATEPEAEEAATQ
Ga0247745_102723013300022898SoilMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRETEPEAEE
Ga0247797_101628513300023057SoilMGNREVPRIGILRARADLRARAEASPGEEGGSRGKHGFPRATEP
Ga0207688_1009754833300025901Corn, Switchgrass And Miscanthus RhizosphereMGNREVPRIEILARRADLSGASGKARIEEEEGSWGKHGFPHANEPKARENVA
Ga0207675_10001982733300026118Switchgrass RhizosphereMKCHVGEGVMGNREVPRIEILARRADLSGASGKARIEEEEGSWGKHGFPHANEPKARENV
Ga0209686_104439933300026315SoilMSDCGEGVMGNREVPRIEILSVRADLSGARAEACPEEEGGSRGKPGFPRASEPQARETGE
Ga0209266_103472613300026327SoilMGNREVPRIAIFRLRAHLRGAQPEACQEEEEGGSWGKHGFPHATEPKAKEEA
Ga0209057_101707853300026342SoilEVPRIEILRLRAHLRGARAEACLEEEGGSRGKHGFPRATEPEAEEPA
Ga0209156_1002685723300026547SoilMGNREVPRIEILRLRAHLRGARAEACLEEEGGSRGKHGFPRATEPEAEEPA
Ga0209577_1022915433300026552SoilMGNREVPRIEILRLRAHSRGALAEACPEEEGGSRGKQGFPRATEPEAEETE
Ga0209382_1051528133300027909Populus RhizosphereMGNREVPRIETLRARADLRGARAEACPGEEGGTWEKHGFPHATEPQAREAA
Ga0307293_1002265813300028711SoilMGNREVPRIEILRLLRVHLRDALAEACPEEEGGSWGKHGFPHATEPEAEEVR
Ga0307313_1001343823300028715SoilMGNREVPRIEILRLLRVHLRNALAEACPEEEGGSWGKHGFPHATEPEAEEVR
Ga0307319_10000154113300028722SoilMGNREVHRIGIVSTCANLRGARAEASPGEEGGSRGKHGFPRAGEPQAKEAVR
Ga0307280_1004706323300028768SoilMGNREVPRIEILRLLRVHLRNALAEACPEEEGGSWGKHGFPHATEPEAEEAA
Ga0307282_10000439113300028784SoilVSAGGEGVTGNREVPRIEILRLRAHPGGALAEACSEEEGGSWGKHGFPHATEPEAEEAA
Ga0307282_1004943243300028784SoilGGGRVSGCVEGVMGNREVPWIAILSARVDLPGARAEASMEGEGDPWGKHGFPHAPEPKAEEAA
Ga0307323_1007627923300028787SoilVSGHVEGVMGNREVPRIEILRLLRVHLRNALAEACPEEEGGSWGKHGFPHATEPEAEEVR
Ga0307299_1015694913300028793SoilGNREVPRIEILRLLRVHLRNALAEACPEEEGGSWGKHGFPHATEPEAEEAA
Ga0307284_1002646523300028799SoilMSGCVEGVMGNREVPRIEILGLRAHLRGALAEVCPEKEGGSWGKHGSPHGISP
Ga0307305_1001294323300028807SoilVSGGGEGVMGNREVPRIEILRLRAHLRGALAEACSEEEGGSRGKHGFPCATEPQAEETA
Ga0307296_1000364243300028819SoilMGNREVPRIEILRLRAHPGGALAEACSEEEGGSWGKHGFPHATEPEAEEAA
Ga0307312_1007252943300028828SoilMSGCVEGVMGNREVPRIEILGLRAHLRGALAEVCPEKEGGSRGKHGSPHGISP
Ga0307312_1023941713300028828SoilALLGGDSRVSGCVEGVMGNRKVPWIEILRLRAHLRGVRAEPRLEEEGGSRGKPGFPCATEPEAEEAE
Ga0307278_1005825323300028878SoilVSGLGEGVMGNREVPQIALLSGRADQRGTRAEATSEEEGGSWGKHGFPHATEPQAREEAA
Ga0307277_1000232963300028881SoilVSGGVEGVMGNREVPRNDLLRLRAHLRGALAVACPEKEGGSRGKHGFPRATEPKAKETA
Ga0307308_10000067353300028884SoilMGNREVPRIEILSQRAHPGGALAEACSEEEGGSWGKHGFPHATEPEAEEAA
Ga0307308_1000789553300028884SoilVPRIEILRLRAHPGGALAEACSEEEGGSWGKHGFPHATEPEAEEAA
Ga0307308_1007698633300028884SoilVSGCVEGVMGNREVPRIEILRPRADLRGAWVEASAEEEGGTRGKHGFPRATKPEAEEAA
Ga0308194_1010100023300031421SoilVSGHVEGVMGNREVPRIEILRLLRVHLRDALAEACPEEEGGSWGKHGFPHATEPEAEEVR
Ga0308194_1037826923300031421SoilRIEILRLRAHLRGALAEACSEEEGGSQGKHGFPCATEPQAEETA
Ga0310890_1002588943300032075SoilMGNREVPRIGILRARADLRAWAEASPGEEGGSRGEHGFPRATEPEAEEAATQ
Ga0307472_10014272823300032205Hardwood Forest SoilMGNREVPRIEILRLGAGPRATPTEANSEEEGGTRGEHGFPRATEPEAEEAA
Ga0335085_1017828713300032770SoilGDGRGVQGGGRLSGRGEGVMGNREVPRIDIRSLRADLRGARAEATPEEEGGSWGKPGFPHATEPKAKEAAA
Ga0335084_1006304743300033004SoilMGNREVPRIDIRSLRADLRGARAEATPEEEGGSWGKPGFPHATEPKAKEAAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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