Metagenome Family F067474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067474
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	68 residues
Representative Sequence	PLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANAGTSMRP
Number of Associated Samples	87
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.80 %
% of genes from short scaffolds (< 2000 bps)	88.80 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.600 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.000 % of family members)
Environment Ontology (ENVO)	Unclassified (68.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.35% Coil/Unstructured: 80.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13538	UvrD_C_2	3.20
PF07508	Recombinase	2.40
PF04199	Cyclase	2.40
PF00313	CSD	1.60
PF13676	TIR_2	1.60
PF09339	HTH_IclR	0.80
PF13374	TPR_10	0.80
PF13701	DDE_Tnp_1_4	0.80
PF13458	Peripla_BP_6	0.80
PF13384	HTH_23	0.80
PF11339	DUF3141	0.80
PF03099	BPL_LplA_LipB	0.80
PF00561	Abhydrolase_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.40
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.40
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.80
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.80
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
All Organisms	root	All Organisms	38.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
cellular organisms	root	All Organisms → cellular organisms	38.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.40 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.40 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	1.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.80 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.40 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	1.60 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.40 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	1.60 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.80 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.60 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.40 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	1.60 %
Mesorhizobium sp. ORS 3324	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324	0.80 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10060666	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300004268\|Ga0066398_10103705	Not Available	663	Open in IMG/M
3300005332\|Ga0066388_105588831	Not Available	636	Open in IMG/M
3300005332\|Ga0066388_108549919	Not Available	509	Open in IMG/M
3300005713\|Ga0066905_100882269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	781	Open in IMG/M
3300005713\|Ga0066905_102198487	Not Available	514	Open in IMG/M
3300005764\|Ga0066903_101231733	Not Available	1392	Open in IMG/M
3300005764\|Ga0066903_102326204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300005764\|Ga0066903_104767306	Not Available	721	Open in IMG/M
3300005764\|Ga0066903_105260208	Not Available	684	Open in IMG/M
3300006871\|Ga0075434_101787194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
3300009147\|Ga0114129_12509405	Not Available	616	Open in IMG/M
3300010046\|Ga0126384_10031758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3514	Open in IMG/M
3300010046\|Ga0126384_11842330	Not Available	575	Open in IMG/M
3300010047\|Ga0126382_10456315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1015	Open in IMG/M
3300010048\|Ga0126373_10181152	Not Available	2028	Open in IMG/M
3300010048\|Ga0126373_11919989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300010360\|Ga0126372_10275310	Not Available	1462	Open in IMG/M
3300010361\|Ga0126378_10627347	Not Available	1188	Open in IMG/M
3300010361\|Ga0126378_11477711	Not Available	770	Open in IMG/M
3300010361\|Ga0126378_11511806	Not Available	761	Open in IMG/M
3300010361\|Ga0126378_11816815	Not Available	693	Open in IMG/M
3300010361\|Ga0126378_13003775	Not Available	538	Open in IMG/M
3300010362\|Ga0126377_10373413	Not Available	1429	Open in IMG/M
3300010376\|Ga0126381_101418666	Not Available	1004	Open in IMG/M
3300010398\|Ga0126383_10700406	Not Available	1091	Open in IMG/M
3300010398\|Ga0126383_11456376	Not Available	775	Open in IMG/M
3300010868\|Ga0124844_1005046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2594	Open in IMG/M
3300011270\|Ga0137391_10060353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3246	Open in IMG/M
3300011271\|Ga0137393_10073030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2742	Open in IMG/M
3300012202\|Ga0137363_10349792	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300012971\|Ga0126369_10805936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1022	Open in IMG/M
3300012971\|Ga0126369_10917562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300015372\|Ga0132256_100611366	Not Available	1205	Open in IMG/M
3300016270\|Ga0182036_10326152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300016270\|Ga0182036_10418331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300016319\|Ga0182033_10119293	Not Available	1980	Open in IMG/M
3300016319\|Ga0182033_11068674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300016341\|Ga0182035_10469068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300016371\|Ga0182034_10054808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2655	Open in IMG/M
3300016371\|Ga0182034_11585578	Not Available	575	Open in IMG/M
3300016387\|Ga0182040_10398364	Not Available	1079	Open in IMG/M
3300016387\|Ga0182040_10468591	Not Available	1001	Open in IMG/M
3300016387\|Ga0182040_11006342	Not Available	695	Open in IMG/M
3300016404\|Ga0182037_10145156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1780	Open in IMG/M
3300016404\|Ga0182037_11312606	Not Available	638	Open in IMG/M
3300016422\|Ga0182039_10732932	Not Available	873	Open in IMG/M
3300016445\|Ga0182038_10770002	Not Available	842	Open in IMG/M
3300016445\|Ga0182038_11389997	Not Available	629	Open in IMG/M
3300021560\|Ga0126371_10389531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1534	Open in IMG/M
3300021560\|Ga0126371_12351740	Not Available	644	Open in IMG/M
3300021560\|Ga0126371_12527693	Not Available	622	Open in IMG/M
3300026551\|Ga0209648_10549353	Not Available	647	Open in IMG/M
3300027654\|Ga0209799_1033129	Not Available	1147	Open in IMG/M
3300031544\|Ga0318534_10557794	Not Available	652	Open in IMG/M
3300031545\|Ga0318541_10432934	Not Available	735	Open in IMG/M
3300031545\|Ga0318541_10833402	Not Available	514	Open in IMG/M
3300031564\|Ga0318573_10797720	Not Available	507	Open in IMG/M
3300031573\|Ga0310915_10717445	Not Available	705	Open in IMG/M
3300031640\|Ga0318555_10382579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	763	Open in IMG/M
3300031668\|Ga0318542_10204553	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300031668\|Ga0318542_10229371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300031679\|Ga0318561_10090879	Not Available	1593	Open in IMG/M
3300031679\|Ga0318561_10157076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	1223	Open in IMG/M
3300031681\|Ga0318572_10642534	Not Available	632	Open in IMG/M
3300031682\|Ga0318560_10135512	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300031682\|Ga0318560_10375232	Not Available	769	Open in IMG/M
3300031713\|Ga0318496_10703081	Not Available	557	Open in IMG/M
3300031719\|Ga0306917_10047649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2866	Open in IMG/M
3300031719\|Ga0306917_10356668	Not Available	1137	Open in IMG/M
3300031723\|Ga0318493_10094543	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300031736\|Ga0318501_10820851	Not Available	515	Open in IMG/M
3300031747\|Ga0318502_10581888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300031764\|Ga0318535_10442553	Not Available	579	Open in IMG/M
3300031768\|Ga0318509_10289825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300031769\|Ga0318526_10261219	Not Available	708	Open in IMG/M
3300031769\|Ga0318526_10316372	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300031770\|Ga0318521_10623046	Not Available	653	Open in IMG/M
3300031771\|Ga0318546_10105735	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300031771\|Ga0318546_10723296	Not Available	700	Open in IMG/M
3300031777\|Ga0318543_10246479	Not Available	797	Open in IMG/M
3300031777\|Ga0318543_10334758	Not Available	677	Open in IMG/M
3300031779\|Ga0318566_10161518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1111	Open in IMG/M
3300031781\|Ga0318547_10236299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300031782\|Ga0318552_10362466	Not Available	738	Open in IMG/M
3300031782\|Ga0318552_10617445	Not Available	553	Open in IMG/M
3300031794\|Ga0318503_10229751	Not Available	602	Open in IMG/M
3300031798\|Ga0318523_10423969	Not Available	660	Open in IMG/M
3300031819\|Ga0318568_10321743	Not Available	961	Open in IMG/M
3300031821\|Ga0318567_10310001	Not Available	890	Open in IMG/M
3300031832\|Ga0318499_10280865	Not Available	644	Open in IMG/M
3300031833\|Ga0310917_10655848	Not Available	711	Open in IMG/M
3300031835\|Ga0318517_10168225	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300031835\|Ga0318517_10319415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	702	Open in IMG/M
3300031845\|Ga0318511_10361170	Not Available	662	Open in IMG/M
3300031879\|Ga0306919_10558160	Not Available	883	Open in IMG/M
3300031879\|Ga0306919_10740425	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031880\|Ga0318544_10145105	Not Available	908	Open in IMG/M
3300031880\|Ga0318544_10283073	Not Available	643	Open in IMG/M
3300031890\|Ga0306925_10279457	Not Available	1797	Open in IMG/M
3300031893\|Ga0318536_10283330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324	841	Open in IMG/M
3300031910\|Ga0306923_10120446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2976	Open in IMG/M
3300031910\|Ga0306923_10563459	Not Available	1282	Open in IMG/M
3300031942\|Ga0310916_10234789	Not Available	1542	Open in IMG/M
3300031946\|Ga0310910_10691712	Not Available	806	Open in IMG/M
3300031947\|Ga0310909_10564027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	952	Open in IMG/M
3300031947\|Ga0310909_10667268	Not Available	865	Open in IMG/M
3300031981\|Ga0318531_10298081	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300032001\|Ga0306922_10005751	All Organisms → cellular organisms → Bacteria → Proteobacteria	11856	Open in IMG/M
3300032001\|Ga0306922_10891079	Not Available	924	Open in IMG/M
3300032025\|Ga0318507_10023701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2212	Open in IMG/M
3300032035\|Ga0310911_10056890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2052	Open in IMG/M
3300032035\|Ga0310911_10351197	Not Available	851	Open in IMG/M
3300032052\|Ga0318506_10403279	Not Available	606	Open in IMG/M
3300032059\|Ga0318533_11092446	Not Available	584	Open in IMG/M
3300032060\|Ga0318505_10336618	Not Available	713	Open in IMG/M
3300032064\|Ga0318510_10262850	Not Available	711	Open in IMG/M
3300032065\|Ga0318513_10300565	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300032067\|Ga0318524_10519387	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300032076\|Ga0306924_10183213	Not Available	2403	Open in IMG/M
3300032090\|Ga0318518_10024343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2706	Open in IMG/M
3300032091\|Ga0318577_10034865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2195	Open in IMG/M
3300032094\|Ga0318540_10237680	Not Available	879	Open in IMG/M
3300032261\|Ga0306920_100533841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1739	Open in IMG/M
3300033290\|Ga0318519_10424254	Not Available	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.60%
Host-Associated	Host-Associated	2.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.60%
Plants	Host-Associated → Plants	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.40%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.80%
Loam	Environmental → Terrestrial → Soil → Loam	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100606661	3300002906	Grasslands Soil	GVPQVRPALVLPQGTVQMAIPLQQGTGTNQTIGVGQVRPANAVTSMRPQGVIGRRF*
Ga0066398_101037052	3300004268	Tropical Forest Soil	GTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTSQTIGVGQVRPANAGPAMRAQGVIGKRF*
Ga0066388_1055888312	3300005332	Tropical Forest Soil	QSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP*
Ga0066388_1085499191	3300005332	Tropical Forest Soil	NQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL*
Ga0066905_1008822691	3300005713	Tropical Forest Soil	GTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTTGVGQVRPANADTSMRR*
Ga0066905_1021984871	3300005713	Tropical Forest Soil	LPLQQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGANQRIGFGPANAGTSMRR*
Ga0066903_1012317334	3300005764	Tropical Forest Soil	TIGVPQVRPVLVLPQGTVQQALPLPLQQGTGINQRIGFGPANAGTSMRPQGVIGKRF*
Ga0066903_1023262042	3300005764	Tropical Forest Soil	LQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGINQRIGFGPANAGTSMRPQGVIGKRF*
Ga0066903_1047673061	3300005764	Tropical Forest Soil	NQTVLPLQQGTSANQTIGIPQVRPVLVLPQGTVQTALPLPVREGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL*
Ga0066903_1052602081	3300005764	Tropical Forest Soil	TIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNPTIGVGEVRPANAGTSIRPQGLIGRGF
Ga0075434_1017871941	3300006871	Populus Rhizosphere	GAVLNQTVIPLQQGTGTNPTIGVPQVRPALVLPQGTVQMAIPLQQGTGTNPTLGVGQVRPANAGTSMRPQGVIGKRF*
Ga0114129_125094052	3300009147	Populus Rhizosphere	PLPLQQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLQQGTGSNQKIGVGQVRPANAATSMRAQGAIGKRL*
Ga0126384_100317581	3300010046	Tropical Forest Soil	LSLQRDIVLNQTVFPLQQSTGTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTNRTIGVGQVRPANAGTSMRPQGLIGKRF*
Ga0126384_118423301	3300010046	Tropical Forest Soil	PVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIGKRL*
Ga0126382_104563151	3300010047	Tropical Forest Soil	PNPTICVPQVRPVLLLPQGTVQNALPLPLQQATGTNRTIGVGQVRPANAGTSMRPQGLIGKRF*
Ga0126373_101811526	3300010048	Tropical Forest Soil	GTVQNAVPLEQSTGTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTDTNQTIGVGQVRPANAGTSMRPQGLIGRGF*
Ga0126373_119199891	3300010048	Tropical Forest Soil	QSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTTGVGQVRPANADTSMRR*
Ga0126372_102753102	3300010360	Tropical Forest Soil	LQRDIVLNQTVFPLQQSTGTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQSTGTSQTIGVGQVRPANAGPAMRAQGVIGKRF*
Ga0126378_106273471	3300010361	Tropical Forest Soil	QVRPVLVLPQGTVQNAVPLPLQLGTDTNQTIGVGQVRPANAGTSMRPQGLIGRGF*
Ga0126378_114777111	3300010361	Tropical Forest Soil	QSTGTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMHR*
Ga0126378_115118062	3300010361	Tropical Forest Soil	LQQSTGTNLTIGVPQVRTELLLQLRTIPNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF*
Ga0126378_118168151	3300010361	Tropical Forest Soil	PVLVLPQGTVQTALPLPLRQGTGTNQTIGAGQVRPANAGTSMRAQGVIAKRL*
Ga0126378_130037751	3300010361	Tropical Forest Soil	STGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP*
Ga0126377_103734133	3300010362	Tropical Forest Soil	LQRDIVLNQTVFPLQQSTGTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMGAQGVIGKRF*
Ga0126381_1014186661	3300010376	Tropical Forest Soil	ALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANAGTSMRPQGLIDR*
Ga0126383_107004061	3300010398	Tropical Forest Soil	TNPTIGVPQVRPVLVLPQGTVQNALPLPLQQGTGTNQTIGVGQVRPPNAGTSK*
Ga0126383_114563761	3300010398	Tropical Forest Soil	VPQARPALILQSQRGAVLNQTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR*
Ga0124844_10050461	3300010868	Tropical Forest Soil	LQRDIVLNQTVFPLQQSTGTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF*
Ga0137391_100603536	3300011270	Vadose Zone Soil	PQVRPALVLPQGTVQMAIPLQQGTGTNQTIGVGQVRPANAGTSMRPQGVIGKRF*
Ga0137393_100730301	3300011271	Vadose Zone Soil	RPALVLPQGTVQMAIPLQQGTGTNQTIGVGQVRPANAGTSMRPQGVIGKRF*
Ga0137363_103497921	3300012202	Vadose Zone Soil	SQQGAGPLQQGTGADQTIGVPQLRPALALPLQRGTVLNQTVLPLQQGTGTNQTIAVPQVRPANAGTSMRAQGVIGKRL*
Ga0126369_108059361	3300012971	Tropical Forest Soil	QGTSANQTIGIPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQARPANAGTSMRAQGVIAKRL*
Ga0126369_109175622	3300012971	Tropical Forest Soil	IPQVRPVLVLPQGTVQTALPLPLRQGTGTNQKIGVGQAKPANAGTSMRAQGVIAKRL*
Ga0132256_1006113661	3300015372	Arabidopsis Rhizosphere	TVLPLQQGTSTNPKIAVPQVRPVLALPQGTVQTALPLPLQQGTASNQKIGVGQVRPANAATSMRAQGAIGKRL*
Ga0182036_103261521	3300016270	Soil	DPTIGVPQVRPVLVLPQGTVQNAIPLPLQLGTGTNQTIGVGQVRPANAGTSMRQ
Ga0182036_104183313	3300016270	Soil	PALVLPQGTVQNALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANAGTSMRP
Ga0182033_101192934	3300016319	Soil	NIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0182033_110686741	3300016319	Soil	RPALALPLQQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGTNQTIGFGPANAGTSMRPQGVIGKRF
Ga0182035_104690681	3300016341	Soil	RPALVLPQGTVQNALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP
Ga0182034_100548085	3300016371	Soil	QQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0182034_115855782	3300016371	Soil	PQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMHR
Ga0182040_103983641	3300016387	Soil	PLEQSTGTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMHR
Ga0182040_104685912	3300016387	Soil	VRPALVLPQGTVQNALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0182040_110063421	3300016387	Soil	NQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0182037_101451563	3300016404	Soil	ALPLQRDIVLNQTVFPLQQSTGANPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0182037_113126061	3300016404	Soil	QTIGIPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKR
Ga0182039_107329321	3300016422	Soil	TVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0182038_107700021	3300016445	Soil	QTVNIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0182038_113899971	3300016445	Soil	VPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0126371_103895314	3300021560	Tropical Forest Soil	DPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTDTNQTIGVGQVRPANAGTSMRPQGLIGRGF
Ga0126371_123517401	3300021560	Tropical Forest Soil	QTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0126371_125276931	3300021560	Tropical Forest Soil	PQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0209648_105493531	3300026551	Grasslands Soil	ALILQSQRGAVLNQTVIPLQQGTGTNPTIGVSQVRSALVLPQGTVQMAIPLQQRTGTNQRIGFGPANAGTSTRHR
Ga0209799_10331294	3300027654	Tropical Forest Soil	NQTVLPLQQSTGTNQTIGVPQVRPTLVLPQGTVQTALPLPLQQGTGTNQTIGVGQVRPANVGTSMRPQGVIAKRF
Ga0318534_105577941	3300031544	Soil	TIGILQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318541_104329341	3300031545	Soil	TGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0318541_108334021	3300031545	Soil	ALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0318573_107977202	3300031564	Soil	QQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0310915_107174451	3300031573	Soil	ALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0318555_103825791	3300031640	Soil	SQGGSALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGTNQRIGFGPASAGGSRR
Ga0318542_102045533	3300031668	Soil	LQQSTGTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANAGTSMR
Ga0318542_102293711	3300031668	Soil	TGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318561_100908793	3300031679	Soil	QRGAVLNQTVNIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318561_101570761	3300031679	Soil	QGGSALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGTNQRIGFGPASAGGSRR
Ga0318572_106425341	3300031681	Soil	LNQTVNIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318560_101355121	3300031682	Soil	IGVPQVRPVLVLPQGTVQNAIPLPLQLGTGTNQTIGVGQVRPANAGTSMRQ
Ga0318560_103752321	3300031682	Soil	ARPALILQSQRGAVLNQTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0318496_107030811	3300031713	Soil	PLQQGAVLNQTVLPLQQGTSANQTIAVPQVRPVLVLPQGTVQTALPLPLRQGTATNQTIGVGQVRPANAGTSMRAQGVIGKRL
Ga0306917_100476491	3300031719	Soil	NQTIGVPQARTALILQSQRGAVLNQTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0306917_103566681	3300031719	Soil	TDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMHR
Ga0318493_100945433	3300031723	Soil	VPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANAGTSMRQ
Ga0318501_108208511	3300031736	Soil	STGTDPTIGVPQVRPMLVLPQGTVQQALPLPLPLPLPLQQGTGTNQTIGVGQVRPANAGTSTRPSGSDR
Ga0318502_105818882	3300031747	Soil	ILPSQQGTGPLQQGTVQNALPLQQSTGTDPTIAVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0318535_104425531	3300031764	Soil	VLPLQQGTSANQTIAVPQVRPVLVLPQGTVQTALPLPLRQGTATNQTIGVGQVRPANAGTSMRAQGVIGKRL
Ga0318509_102898251	3300031768	Soil	LALPLQRGTVLNQTVNIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318526_102612191	3300031769	Soil	PQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0318526_103163721	3300031769	Soil	QQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANASTSMRAQGVIAKRL
Ga0318521_106230461	3300031770	Soil	VFPLQQSTGTNPTIGVPQVRPVLFLPQGTVQNALPLPLQQGTGTSQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0318546_101057353	3300031771	Soil	LPLQRDIVLNQTVFPLQQSTGANPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0318546_107232961	3300031771	Soil	TVLNQTVLPLQQSTGTDPTIGVPQVRPMLVLPQGTVQQALPLPLPLQQGTGTNQTIRVGQVRPANAGTSTRPSGSDR
Ga0318543_102464791	3300031777	Soil	QSIGIPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKR
Ga0318543_103347581	3300031777	Soil	VPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318566_101615181	3300031779	Soil	PLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANAGTSMRP
Ga0318547_102362991	3300031781	Soil	GTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318552_103624663	3300031782	Soil	ALVLPQGSVQISLPLQQSTGTDPTIAVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0318552_106174451	3300031782	Soil	VLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318503_102297511	3300031794	Soil	LNQTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0318523_104239691	3300031798	Soil	RDIVLNQTVFPLQQSTGANPTIGVPQVRPVLLLPQGTVQHALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0318568_103217432	3300031819	Soil	TVLPLQQGTSANQTIAVPQVRPVLVLPQGTVQTALPLPLRQGTATNQTIGVGQVRPANAGTSMRAQGVIGKRL
Ga0318567_103100011	3300031821	Soil	QQSTGANPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0318499_102808651	3300031832	Soil	QGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0310917_106558481	3300031833	Soil	VRPVLVLPQGTVQNAVPLEQSTSTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMHR
Ga0318517_101682252	3300031835	Soil	VLPLQKGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANASTSMRAQGVIAKRL
Ga0318517_103194151	3300031835	Soil	RPARILPSQQGAGPLQQGTGTDQTMGVPQLRPALALHLQRDTVVNQTVLPLQQGTGSNQKIGVGQVRPANAATSMRAQGVIGKRL
Ga0318511_103611701	3300031845	Soil	NQTVLPLQQGTSANQTIAVPQVRPVLVLPQGTVQTALPLPLRQGTATNQTIGVGQVRPANAGTSMRAQGVIGKRL
Ga0306919_105581601	3300031879	Soil	SANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0306919_107404253	3300031879	Soil	LQQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGTNQTIGFGPANAGTSMRPQGVIGKRF
Ga0318544_101451051	3300031880	Soil	TALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318544_102830731	3300031880	Soil	VIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0306925_102794571	3300031890	Soil	LQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0318536_102833301	3300031893	Soil	LVLPQGTVQNALPLQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0306923_101204461	3300031910	Soil	QRGAVLNQTVIPLQQGTGTNPTIGVSQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0306923_105634591	3300031910	Soil	VRPALVLPLQQGTVLNQTVLPLQQSTGTDPTIGVPQVRPMLVLPQGTVQQALPLPLPLPLQQGTGTNQTIRVGQVRP
Ga0310916_102347891	3300031942	Soil	VLVLPQGTVQNAVPLEQSTSTDPTIGVPQVRPVLVLPQGTVQNAVPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0310910_106917122	3300031946	Soil	ANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGINQRIGFGPANAGTSMRPQGVIGKRF
Ga0310909_105640273	3300031947	Soil	PVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP
Ga0310909_106672681	3300031947	Soil	QGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMHVQGVIAKRL
Ga0318531_102980812	3300031981	Soil	ALPLQQGTALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQQALPLPLQQGTGTNQTIGFGPANAGTSMRPQGVIGKRF
Ga0306922_100057511	3300032001	Soil	NQTVNIPLQQGTGTNQTIGVPQVRPMLVLPQGTVQQALPLPLPLSLQQGTGGIGQVRPANAGTSMRPQGVIGKRF
Ga0306922_108910792	3300032001	Soil	QQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMRR
Ga0318507_100237015	3300032025	Soil	QVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP
Ga0310911_100568903	3300032035	Soil	FPLQQSTGTNPTIGVPQVRPVLLLPQGTVQNALPLPLQQGTGTKQTIGVGQVRPANAGPAMRAQGVIGKRF
Ga0310911_103511972	3300032035	Soil	QGTVLNQTVLPLQQGTGTDPTIGVPQVRPMLVLPQGTVQNALPLPLQQGTGTNQTIGVGQVRPANAGTSMRP
Ga0318506_104032792	3300032052	Soil	ALNQTVLPLQQGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318533_110924461	3300032059	Soil	GTVLNQTVLPLQQGTGTDPTIGVPQVRPMLVLPQGTVQNALPLPLQQGTGTNQTIGVGQVRPANAGTSMRP
Ga0318505_103366181	3300032060	Soil	QTLPLNQSTGTNQTIGVPQVRPALVLPQGTVQMTLPLNQRTGTNQRIGFGPANAGASMRH
Ga0318510_102628501	3300032064	Soil	QQGTALNQTVLPLQQGTSANQTIGIPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318513_103005652	3300032065	Soil	VLPLQKGTSANQTIGVPQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPATASTSMRAQGVIAKRL
Ga0318524_105193871	3300032067	Soil	PVLVLPQGTVQQALPLPLQQGTGTNQTIGFGPANAGTSMRPQGVIGKRF
Ga0306924_101832135	3300032076	Soil	DPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQARPANAGTSMRP
Ga0318518_100243436	3300032090	Soil	ILQVRPVLVLPQGTVQTALPLPLRQGTGTNQTIGVGQVRPANAGTSMRAQGVIAKRL
Ga0318577_100348651	3300032091	Soil	QGTVLNQTVLPLQQSTGTDPTIGVPQVRPMLVLPRGTVQQALPLPLPLQQGTGTNQTIGVGQVRPANAGTSTRPSGSDR
Ga0318540_102376801	3300032094	Soil	VIPLQQGTGTNPTIGVPQVRPALVLPQGTVQMALPLQQGTGTNQRIGFGPANAGASMRHR
Ga0306920_1005338414	3300032261	Soil	PQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANAGTSMRP
Ga0318519_104242541	3300033290	Soil	LQQSTGTDPTIGVPQVRPVLVLPQGTVQNALPLPLQLGTGTNQTIGVGQVRPANADTSMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences