Metagenome Family F067468

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067468
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	45 residues
Representative Sequence	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGKHVSLIVFLALY
Number of Associated Samples	90
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.00 %
% of genes near scaffold ends (potentially truncated)	99.20 %
% of genes from short scaffolds (< 2000 bps)	94.40 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.400 % of family members)
Environment Ontology (ENVO)	Unclassified (62.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.200 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.71% β-sheet: 0.00% Coil/Unstructured: 44.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01042	Ribonuc_L-PSP	12.80
PF01068	DNA_ligase_A_M	9.60
PF13193	AMP-binding_C	2.40
PF13560	HTH_31	1.60
PF01738	DLH	1.60
PF03401	TctC	0.80
PF01381	HTH_3	0.80
PF07690	MFS_1	0.80
PF04392	ABC_sub_bind	0.80
PF01494	FAD_binding_3	0.80
PF07045	DUF1330	0.80
PF00005	ABC_tran	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	12.80
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	9.60
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	9.60
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.60
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.80
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.80
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.80
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.80
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.80
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.00 %
Unclassified	root	N/A	48.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.60 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	29.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Variibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.60 %
Variibacter gotjawalensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig84469	Not Available	655	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10159943	Not Available	539	Open in IMG/M
3300005165\|Ga0066869_10022427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	963	Open in IMG/M
3300005332\|Ga0066388_101058721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1367	Open in IMG/M
3300005548\|Ga0070665_101210485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	766	Open in IMG/M
3300005713\|Ga0066905_100501141	Not Available	1009	Open in IMG/M
3300005713\|Ga0066905_101008436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300005764\|Ga0066903_103021233	Not Available	911	Open in IMG/M
3300005764\|Ga0066903_103342642	Not Available	866	Open in IMG/M
3300005764\|Ga0066903_105246274	Not Available	685	Open in IMG/M
3300005764\|Ga0066903_106195685	Not Available	625	Open in IMG/M
3300005764\|Ga0066903_107121168	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_107300932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300005841\|Ga0068863_102545769	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006028\|Ga0070717_11498812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300006880\|Ga0075429_100418424	Not Available	1174	Open in IMG/M
3300010047\|Ga0126382_10526916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	956	Open in IMG/M
3300012212\|Ga0150985_121888047	Not Available	1371	Open in IMG/M
3300012916\|Ga0157310_10093628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	955	Open in IMG/M
3300012944\|Ga0137410_11558639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis	578	Open in IMG/M
3300012944\|Ga0137410_11830496	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012955\|Ga0164298_10472495	Not Available	831	Open in IMG/M
3300013297\|Ga0157378_12295003	Not Available	591	Open in IMG/M
3300014968\|Ga0157379_10721007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	937	Open in IMG/M
3300015200\|Ga0173480_10168329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1135	Open in IMG/M
3300015371\|Ga0132258_11077000	Not Available	2032	Open in IMG/M
3300016294\|Ga0182041_10124823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1940	Open in IMG/M
3300016294\|Ga0182041_10331507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1272	Open in IMG/M
3300016294\|Ga0182041_11337081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300016319\|Ga0182033_11656269	Not Available	579	Open in IMG/M
3300016319\|Ga0182033_12221030	Not Available	500	Open in IMG/M
3300016341\|Ga0182035_11586095	Not Available	590	Open in IMG/M
3300016357\|Ga0182032_12020437	Not Available	506	Open in IMG/M
3300016371\|Ga0182034_11503466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300016387\|Ga0182040_10870469	Not Available	746	Open in IMG/M
3300016387\|Ga0182040_11272601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300021178\|Ga0210408_11376996	Not Available	532	Open in IMG/M
3300021559\|Ga0210409_11396883	Not Available	576	Open in IMG/M
3300021560\|Ga0126371_12220754	Not Available	662	Open in IMG/M
3300021560\|Ga0126371_12303107	Not Available	651	Open in IMG/M
3300021560\|Ga0126371_13583954	Not Available	524	Open in IMG/M
3300025916\|Ga0207663_11682155	Not Available	511	Open in IMG/M
3300025923\|Ga0207681_10612866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300025940\|Ga0207691_11036489	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300025960\|Ga0207651_11798713	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300026067\|Ga0207678_10765286	Not Available	852	Open in IMG/M
3300026078\|Ga0207702_12228483	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300026997\|Ga0207784_1035548	Not Available	508	Open in IMG/M
3300027703\|Ga0207862_1191500	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300028379\|Ga0268266_12362310	Not Available	503	Open in IMG/M
3300028718\|Ga0307307_10318663	Not Available	502	Open in IMG/M
3300028719\|Ga0307301_10286210	Not Available	540	Open in IMG/M
3300028809\|Ga0247824_10890590	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300028828\|Ga0307312_10187968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1323	Open in IMG/M
3300028885\|Ga0307304_10405079	Not Available	616	Open in IMG/M
3300031152\|Ga0307501_10269711	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031545\|Ga0318541_10068262	Not Available	1859	Open in IMG/M
3300031545\|Ga0318541_10100981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1549	Open in IMG/M
3300031546\|Ga0318538_10632539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031549\|Ga0318571_10411210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031561\|Ga0318528_10466827	Not Available	678	Open in IMG/M
3300031572\|Ga0318515_10064745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1867	Open in IMG/M
3300031572\|Ga0318515_10144113	Not Available	1267	Open in IMG/M
3300031572\|Ga0318515_10175297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300031573\|Ga0310915_10248437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1251	Open in IMG/M
3300031640\|Ga0318555_10084738	Not Available	1654	Open in IMG/M
3300031640\|Ga0318555_10093879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1575	Open in IMG/M
3300031679\|Ga0318561_10581547	Not Available	617	Open in IMG/M
3300031680\|Ga0318574_10042541	Not Available	2357	Open in IMG/M
3300031681\|Ga0318572_10357400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300031719\|Ga0306917_11413279	Not Available	536	Open in IMG/M
3300031724\|Ga0318500_10006977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3731	Open in IMG/M
3300031724\|Ga0318500_10156300	Not Available	1075	Open in IMG/M
3300031724\|Ga0318500_10434348	Not Available	655	Open in IMG/M
3300031736\|Ga0318501_10072948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1662	Open in IMG/M
3300031744\|Ga0306918_11459036	Not Available	523	Open in IMG/M
3300031747\|Ga0318502_10474485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031747\|Ga0318502_10488047	Not Available	737	Open in IMG/M
3300031748\|Ga0318492_10022093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2778	Open in IMG/M
3300031763\|Ga0318537_10019585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2346	Open in IMG/M
3300031781\|Ga0318547_10442146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031793\|Ga0318548_10030077	Not Available	2376	Open in IMG/M
3300031795\|Ga0318557_10157923	Not Available	1027	Open in IMG/M
3300031798\|Ga0318523_10616172	Not Available	534	Open in IMG/M
3300031799\|Ga0318565_10090092	Not Available	1465	Open in IMG/M
3300031805\|Ga0318497_10607371	Not Available	613	Open in IMG/M
3300031819\|Ga0318568_10167190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1350	Open in IMG/M
3300031845\|Ga0318511_10045993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1733	Open in IMG/M
3300031845\|Ga0318511_10222790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	842	Open in IMG/M
3300031860\|Ga0318495_10521163	Not Available	518	Open in IMG/M
3300031880\|Ga0318544_10181185	Not Available	811	Open in IMG/M
3300031890\|Ga0306925_10248111	Not Available	1918	Open in IMG/M
3300031890\|Ga0306925_10298971	All Organisms → cellular organisms → Bacteria → Proteobacteria	1732	Open in IMG/M
3300031890\|Ga0306925_10445346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1384	Open in IMG/M
3300031890\|Ga0306925_11372525	Not Available	698	Open in IMG/M
3300031890\|Ga0306925_11558379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031893\|Ga0318536_10675665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300031897\|Ga0318520_10786975	Not Available	597	Open in IMG/M
3300031912\|Ga0306921_12319354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031942\|Ga0310916_10380434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1200	Open in IMG/M
3300031942\|Ga0310916_10462709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300031945\|Ga0310913_10100728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1953	Open in IMG/M
3300031946\|Ga0310910_11139214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300031981\|Ga0318531_10039817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1962	Open in IMG/M
3300031981\|Ga0318531_10377578	Not Available	641	Open in IMG/M
3300032013\|Ga0310906_11441221	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300032035\|Ga0310911_10183433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1186	Open in IMG/M
3300032041\|Ga0318549_10324683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300032042\|Ga0318545_10343252	Not Available	537	Open in IMG/M
3300032044\|Ga0318558_10161432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1082	Open in IMG/M
3300032044\|Ga0318558_10524765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300032044\|Ga0318558_10646538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300032051\|Ga0318532_10231739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300032051\|Ga0318532_10331001	Not Available	540	Open in IMG/M
3300032052\|Ga0318506_10459601	Not Available	564	Open in IMG/M
3300032059\|Ga0318533_10465473	Not Available	926	Open in IMG/M
3300032063\|Ga0318504_10020794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2482	Open in IMG/M
3300032063\|Ga0318504_10246659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	840	Open in IMG/M
3300032063\|Ga0318504_10535689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300032063\|Ga0318504_10626476	Not Available	517	Open in IMG/M
3300032076\|Ga0306924_10565469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1289	Open in IMG/M
3300032261\|Ga0306920_101459000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300032261\|Ga0306920_102364729	Not Available	734	Open in IMG/M
3300032261\|Ga0306920_102591949	Not Available	695	Open in IMG/M
3300033289\|Ga0310914_10676170	Not Available	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.80%
Host-Associated	Host-Associated	10.40%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.80%
Plants	Host-Associated → Plants	10.40%
Modeled	Engineered → Modeled	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.20%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.40%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0469.00005640	2166559005	Simulated	VTIAEGIVTLLAYYLVFMIAGDVLAYFLGLFVEYEWGPHVSLIVFLALYFVFLWVAW
AF_2010_repII_A1DRAFT_101599431	3300000597	Forest Soil	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGKHVSLIVFLALYFFS
Ga0066869_100224273	3300005165	Soil	VTLLAYYLVFMIAGDVLAYFLGLFVEYEWGPHVSLIVFLALYFVFLWV
Ga0066388_1010587214	3300005332	Tropical Forest Soil	VSLILYYVAFMIGGDFAAYFLGLLVEYEWGTNVSLIVFLAL
Ga0070665_1012104853	3300005548	Switchgrass Rhizosphere	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFLALY
Ga0066905_1005011413	3300005713	Tropical Forest Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGTNVSLIVFLA
Ga0066905_1010084362	3300005713	Tropical Forest Soil	VTLILYYVAFMIVGDFAAYFLGLLVEYEWGKQVSLIVFLALYFFSL
Ga0066903_1030212331	3300005764	Tropical Forest Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGTNVSLIVFL
Ga0066903_1033426424	3300005764	Tropical Forest Soil	LYYVAFMIGGTFVAYFLGLLVEYEWGPHISLIVFLALYFFSLWVA*
Ga0066903_1052462741	3300005764	Tropical Forest Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGPHVSLIVFL
Ga0066903_1061956852	3300005764	Tropical Forest Soil	VSLILYYLAFMIGGAFAAYFLGLLVEYEWGTHVSLIVFLAVYFFSLW
Ga0066903_1071211681	3300005764	Tropical Forest Soil	VTLILYYVAFMIGGAFAAYFLGLLVEYEWGTHVSLIVFLAVYFFSLW
Ga0066903_1073009321	3300005764	Tropical Forest Soil	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGKHVSLIVFLA
Ga0068863_1025457692	3300005841	Switchgrass Rhizosphere	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFLALYFLFL
Ga0070717_114988122	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLIAYYLAFMIVGDLAAYFIGLSVEYEWGPHVSLIVFLF
Ga0075429_1004184241	3300006880	Populus Rhizosphere	VSLIIYYVAFMIVGYFAAYLLGLFTEYEWGSFASLMVFLSLY
Ga0126382_105269161	3300010047	Tropical Forest Soil	VTLILYYVVFVIGGDLAAYFLGLLVEYEWGTRASL
Ga0150985_1218880471	3300012212	Avena Fatua Rhizosphere	VALLAYYLVFMIGGDVLAYFLGLFVEYEWGPHVSLIVFLALYFVFLW
Ga0157310_100936281	3300012916	Soil	LAEAIVTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVF
Ga0137410_115586391	3300012944	Vadose Zone Soil	VSLIAYYLAFMIAGDFAAYFLGLMVEYRWGSHVSLIVFLVLYFVF
Ga0137410_118304961	3300012944	Vadose Zone Soil	VTLLIYYVVFMVAGDFVAYFLGRFVEYEWGSHASLVVFLALYFLFLWVSWV
Ga0164298_104724952	3300012955	Soil	MLLIVYYLVFMVAGDFLAYFLGLFVEHEWGSQVSLFVFLFLYFLFLWVSW
Ga0157378_122950031	3300013297	Miscanthus Rhizosphere	LAEAIVTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFLALYFLFLW
Ga0157379_107210071	3300014968	Switchgrass Rhizosphere	VTLLIYYVVFMVAGDFAAYFLGLFVEYEWGPHVSLIVFLALY
Ga0173480_101683291	3300015200	Soil	LAEAIVTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVS
Ga0132258_110770001	3300015371	Arabidopsis Rhizosphere	VALLAYYLVFMIGGDVLAYFLGLFVEYEWGPHVSLIVFLALYFVFLWVAW
Ga0182041_101248231	3300016294	Soil	VSLILYYVVFMIGGDVAAYFLGLLVEYEWGTHVSLIVFLVLYFFS
Ga0182041_103315071	3300016294	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALY
Ga0182041_113370812	3300016294	Soil	VTLILYYVAFMIGGDIAAYFLGLLVEYEWGKQVSLIVFLALYFISLWVAWMLA
Ga0182033_116562691	3300016319	Soil	VTLILYYVAFMIGGAFAAYFLGLLVEYEWGTHVSLIVFLVLYFFSLWVAWMLAV
Ga0182033_122210301	3300016319	Soil	VTLLLFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLALYFLFLWVS
Ga0182035_115860951	3300016341	Soil	VTLLLFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVF
Ga0182032_120204371	3300016357	Soil	VTLILFYVVFMIGGDIAAYLLGLLVEYEWGPHVSLIVFLV
Ga0182034_115034662	3300016371	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLALYFLFLWVSWVL
Ga0182040_108704691	3300016387	Soil	VTLILFHIAFMIGGTFAAYFLGLLVEYEWGTNVSLIVFLALY
Ga0182040_112726011	3300016387	Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGKQVSLIV
Ga0210408_113769961	3300021178	Soil	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGTHVSLIAFLVL
Ga0210409_113968831	3300021559	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGTHASLIVFLVLYFFFLWV
Ga0126371_122207541	3300021560	Tropical Forest Soil	VNLILFYVVFMIGGDLAAYLLGLLVEYQWGKQVSLL
Ga0126371_123031071	3300021560	Tropical Forest Soil	VTLILYYVAFMIGGTFVAYFLGLLVEYEWGPHVSLIVFLALYFFSLW
Ga0126371_135839541	3300021560	Tropical Forest Soil	VTLILYYVAFMIGGDIAAYFLGLLVEYEWGPHVSLIVFLV
Ga0207663_116821551	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLLIVYYVVFMVAGDFLAYFLGLFVEHEWGSQVSLFVFLFL
Ga0207681_106128663	3300025923	Switchgrass Rhizosphere	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLI
Ga0207691_110364892	3300025940	Miscanthus Rhizosphere	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFLALYFL
Ga0207651_117987131	3300025960	Switchgrass Rhizosphere	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFL
Ga0207678_107652862	3300026067	Corn Rhizosphere	VALLAYYLVFMIGGDLLAYFLGLFVEYEWGPHVSLIVFLALYFVFLWV
Ga0207702_122284831	3300026078	Corn Rhizosphere	VTLLAYYLVFMIAGDVLAYFLGLFVEYEWGPHVSLVVFLALYFIFLWVAWQF
Ga0207784_10355482	3300026997	Tropical Forest Soil	VQLIIYYLVFMISGDFAAYFIGLFVEYEWGSHASLIVFLVLY
Ga0207862_11915002	3300027703	Tropical Forest Soil	VQLLFYYLAFMIVGDFAAYFLGLFVEHEWGSHASLIVFLALY
Ga0268266_123623101	3300028379	Switchgrass Rhizosphere	VALLAYYLVFMIGGDVLAYFLGLFVEYEWGPHVSLIVFL
Ga0307307_103186631	3300028718	Soil	VTLLIYYLVFMVAGDFVAYFLGRFVEYEWGSHASLVVFLALYFLFLW
Ga0307301_102862102	3300028719	Soil	VTLLIYYLVFMVAGDFVAYFLGRFVEYEWGSHASLVVFLALYFLF
Ga0247824_108905901	3300028809	Soil	VTLLIYYLVFMVAGDFVAYFLGLFVEYEWGPHVSLIVFLALYFLFLWVS
Ga0307312_101879683	3300028828	Soil	VTLLIYYLVFMVAGDFVAYFLGRFVEYEWGSHASLVVFLALYFLFLWVSWVL
Ga0307304_104050791	3300028885	Soil	VTLLAYYLVFMIAGDVLAYFLGLFVEYEWGPHVSLIVFL
Ga0307501_102697111	3300031152	Soil	VTLLAYYLVFMIAGDVLAYFLGLFVEYEWGPHVSLIVFLALYFVF
Ga0318541_100682625	3300031545	Soil	VTLLLFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLALYFLFLW
Ga0318541_101009811	3300031545	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVLYFFS
Ga0318538_106325392	3300031546	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVFYFFSLWVAW
Ga0318571_104112102	3300031549	Soil	VTLILYYLAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFFSLWVAWILAV
Ga0318528_104668272	3300031561	Soil	VTLILYYLAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFFSIWVAWILAVWV
Ga0318515_100647451	3300031572	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLALYF
Ga0318515_101441133	3300031572	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFL
Ga0318515_101752971	3300031572	Soil	MTLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIV
Ga0310915_102484371	3300031573	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYQWGKQGSLLVFLALYFLFLWVS
Ga0318555_100847381	3300031640	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQASQLVFLALYFLFLW
Ga0318555_100938793	3300031640	Soil	VTLIFYYVAFMIGGDLAAYFLGLLVEYEWGTHASLIVFLVLY
Ga0318561_105815472	3300031679	Soil	VTLILFHIAFMIGGTFAAYFLGLLVEYEWGTHVSLIVFLALYFFSLWVAW
Ga0318574_100425411	3300031680	Soil	VTLILYYLAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFF
Ga0318572_103574001	3300031681	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLAL
Ga0306917_114132792	3300031719	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALYFLFLWVSWVLAV
Ga0318500_100069771	3300031724	Soil	VTLILYYRAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFFSLWVA
Ga0318500_101563001	3300031724	Soil	VTLILYYVAFMIGGDLAAYLHGLLVEYEWGKQASLLVF
Ga0318500_104343482	3300031724	Soil	VTLILYYVAFMIGGDLAAYFVGLLVEYEWGKQASLLVFLAL
Ga0318501_100729481	3300031736	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVLYFFSLWVAWMLA
Ga0306918_114590362	3300031744	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLA
Ga0318502_104744852	3300031747	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLA
Ga0318502_104880471	3300031747	Soil	VSLILYYVVFMIGGDVAAYFLGLLVEYEWGTHVSLIVFLV
Ga0318492_100220935	3300031748	Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGTNVSLIVFLALYFFSLWV
Ga0318537_100195851	3300031763	Soil	VSLILYYVVFMIGGDVAAYFLGLLVEYEWGTHVSLIVF
Ga0318547_104421461	3300031781	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLALY
Ga0318548_100300771	3300031793	Soil	VTLILYYLAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFFSIWVAWILAV
Ga0318557_101579231	3300031795	Soil	VTLILFYVVFMIGGSIAAYFLGLIVEYEWGPHVSLIVFL
Ga0318523_106161722	3300031798	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLALYFLFLWVSW
Ga0318565_100900924	3300031799	Soil	VTLILYYVAFMIGGDFAAYFLGLLVEYEWGTNVSLI
Ga0318497_106073711	3300031805	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYQWGKQVSLLVFLALYFLFLWV
Ga0318568_101671901	3300031819	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALYF
Ga0318511_100459931	3300031845	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLALYFLFL
Ga0318511_102227901	3300031845	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALYFLF
Ga0318495_105211631	3300031860	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLALYFLFLWIS
Ga0318544_101811851	3300031880	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYQWGKQGSLLVFLALYFLFLWVS
Ga0306925_102481115	3300031890	Soil	VTLLLFYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLAL
Ga0306925_102989711	3300031890	Soil	VTLILYYVAFMIGGDLAAYFVGLLVEYEWGKQASLLVFLA
Ga0306925_104453462	3300031890	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYQWGKQVSLL
Ga0306925_113725252	3300031890	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQASLLVFLAL
Ga0306925_115583792	3300031890	Soil	VTLILYYVAFMIGGAFAAYFLGLLVEYEWGTHVSLIVFLAVYFFS
Ga0318536_106756652	3300031893	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLALYFLFLWV
Ga0318520_107869751	3300031897	Soil	VTLILYYVAFMIGGDLAAYFVGLLVEYEWGKQASLLVFLALYFLFLWVSW
Ga0306921_123193542	3300031912	Soil	VSLILYYLAFMIGGDLVAYFLGLLVEYEWGKQVSLIVFLALYFFSLW
Ga0310916_103804341	3300031942	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYQWGKQVSL
Ga0310916_104627092	3300031942	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVLYFFSLWVAW
Ga0310913_101007285	3300031945	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVLYFF
Ga0310910_111392141	3300031946	Soil	VTLILYYVAFMIGGDLAAYLHGLLVEYEWGKRASLLVFLALYFLFLWV
Ga0318531_100398171	3300031981	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFL
Ga0318531_103775781	3300031981	Soil	VTLILYYVAFMIGGDFVAYFVGLLVEYEWGTHVSLIVFLALYFFSLWVAWLLS
Ga0310906_114412211	3300032013	Soil	VALLAYYLVFMVAGDILAYFLGLFVEYEWGPHVSLIVFLALYFVFLW
Ga0310911_101834331	3300032035	Soil	VTLILFHIAFMIGGTFAAYFLGLLVEYEWGTHVSLIVFLALYFFSLWVAWMLAV
Ga0318549_103246831	3300032041	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALYFLFLW
Ga0318545_103432522	3300032042	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYQWGKQGSLLVFLALYFLFL
Ga0318558_101614321	3300032044	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYQWGKQVSLLVFLA
Ga0318558_105247652	3300032044	Soil	VSLILYYVVFMIGGDIAAYFLGLLVEYEWGTHVSLIVFLVLYF
Ga0318558_106465381	3300032044	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLALYFLFLWVSWV
Ga0318532_102317392	3300032051	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVFLALYFLFLWV
Ga0318532_103310011	3300032051	Soil	VTLILYYVAFMIGGDLAAYFLGLLVEYEWGKQASLLVFLAL
Ga0318506_104596012	3300032052	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYQWGKQVSLLVFLALYFLFLW
Ga0318533_104654731	3300032059	Soil	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGTHVSLIVFLVLYFFFLWVAWVLA
Ga0318504_100207941	3300032063	Soil	VSLILYYVVFMIGGDVAAYFLGLLVEYEWGTHVSLIVFLVLYFFSLWVAWMLAV
Ga0318504_102466592	3300032063	Soil	VTLILYYLAFMIGGAFAAYLLGLLVEYEWGTHVSLIVFLAVYFFSLWVAW
Ga0318504_105356892	3300032063	Soil	VALILYYVAFMIGGAFAAYFVGLLVEYEWGTHVSLIVFLAVYFFSLWVAWVLAV
Ga0318504_106264761	3300032063	Soil	VTLILYYVAFMIGGDLVAYFLGLLVEYEWGKHVSLIVFLALY
Ga0306924_105654693	3300032076	Soil	VTLILYYVAFMIGGDLAAYLLGLLVEYEWGKQVSLLVF
Ga0306920_1014590001	3300032261	Soil	VTLILYYVAFMIGGAFAAYFLGLLVEYEWGTHVSLIVFLAVYFFSLWVAWILA
Ga0306920_1023647291	3300032261	Soil	VTLILFYVAFMIGGDLAAYLLGLLVEYQRGKQVSLLVFLALYFVFLW
Ga0306920_1025919491	3300032261	Soil	VTLILYYVAFMIGGDIAAYFLGLLVEYEWGPHVSLIVFLVLYFLFLWISW
Ga0310914_106761701	3300033289	Soil	VTLILFYLAFMIGGDLAAYLLGLLVEYQWGKQVSLLVFLAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067468

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences