Metagenome Family F067407

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067407
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	54 residues
Representative Sequence	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA
Number of Associated Samples	51
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.00 %
% of genes near scaffold ends (potentially truncated)	28.00 %
% of genes from short scaffolds (< 2000 bps)	96.80 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (92.800 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer (68.800 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.23% β-sheet: 0.00% Coil/Unstructured: 30.77%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01464	SLT	5.60
PF01381	HTH_3	4.00
PF05866	RusA	1.60
PF01909	NTP_transf_2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.60

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
All Organisms	root	All Organisms	7.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
cellular organisms	root	All Organisms → cellular organisms	7.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.20 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.40 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.40 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.80 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.40 %
Candidatus Omnitrophica bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003830\|Ga0051980_10144709	Not Available	1304	Open in IMG/M
3300003830\|Ga0051980_10150015	Not Available	1270	Open in IMG/M
3300003830\|Ga0051980_10153961	Not Available	1246	Open in IMG/M
3300003830\|Ga0051980_10306669	Not Available	747	Open in IMG/M
3300004149\|Ga0066632_10256611	Not Available	538	Open in IMG/M
3300004239\|Ga0066650_10395373	Not Available	657	Open in IMG/M
3300005235\|Ga0066637_10286589	Not Available	639	Open in IMG/M
3300005235\|Ga0066637_10287153	Not Available	638	Open in IMG/M
3300005236\|Ga0066636_10145707	Not Available	1125	Open in IMG/M
3300005236\|Ga0066636_10147528	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005236\|Ga0066636_10169350	Not Available	1012	Open in IMG/M
3300005236\|Ga0066636_10236309	Not Available	800	Open in IMG/M
3300005236\|Ga0066636_10238814	Not Available	794	Open in IMG/M
3300005236\|Ga0066636_10246559	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005236\|Ga0066636_10252509	Not Available	764	Open in IMG/M
3300005236\|Ga0066636_10312089	Not Available	657	Open in IMG/M
3300005236\|Ga0066636_10319614	Not Available	646	Open in IMG/M
3300005236\|Ga0066636_10331925	Not Available	629	Open in IMG/M
3300005236\|Ga0066636_10393953	Not Available	557	Open in IMG/M
3300005236\|Ga0066636_10422608	Not Available	530	Open in IMG/M
3300005236\|Ga0066636_10445214	Not Available	511	Open in IMG/M
3300005236\|Ga0066636_10459455	Not Available	500	Open in IMG/M
3300007965\|Ga0100401_1284223	Not Available	642	Open in IMG/M
3300007965\|Ga0100401_1301497	Not Available	615	Open in IMG/M
3300007985\|Ga0100381_1092757	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1748	Open in IMG/M
3300007985\|Ga0100381_1218635	Not Available	931	Open in IMG/M
3300007986\|Ga0100380_10280370	Not Available	827	Open in IMG/M
3300007986\|Ga0100380_10294830	Not Available	797	Open in IMG/M
3300007987\|Ga0100379_10102420	Not Available	1687	Open in IMG/M
3300007988\|Ga0100402_1226459	Not Available	876	Open in IMG/M
3300008001\|Ga0100389_1223366	Not Available	871	Open in IMG/M
3300008001\|Ga0100389_1231721	Not Available	849	Open in IMG/M
3300008001\|Ga0100389_1312228	Not Available	691	Open in IMG/M
3300008001\|Ga0100389_1313266	Not Available	689	Open in IMG/M
3300008001\|Ga0100389_1348037	Not Available	641	Open in IMG/M
3300008001\|Ga0100389_1380109	Not Available	604	Open in IMG/M
3300008002\|Ga0100390_10263016	Not Available	871	Open in IMG/M
3300008002\|Ga0100390_10381485	Not Available	663	Open in IMG/M
3300008002\|Ga0100390_10389373	Not Available	653	Open in IMG/M
3300008002\|Ga0100390_10491656	Not Available	553	Open in IMG/M
3300008003\|Ga0100391_1316514	Not Available	735	Open in IMG/M
3300008003\|Ga0100391_1391797	Not Available	631	Open in IMG/M
3300008003\|Ga0100391_1399280	Not Available	623	Open in IMG/M
3300008004\|Ga0100395_1103139	Not Available	1370	Open in IMG/M
3300008004\|Ga0100395_1194098	Not Available	886	Open in IMG/M
3300008004\|Ga0100395_1311553	Not Available	638	Open in IMG/M
3300008005\|Ga0100385_1492120	Not Available	527	Open in IMG/M
3300008007\|Ga0100386_10089394	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1885	Open in IMG/M
3300008007\|Ga0100386_10107974	Not Available	1652	Open in IMG/M
3300008007\|Ga0100386_10332778	Not Available	731	Open in IMG/M
3300008007\|Ga0100386_10446810	Not Available	592	Open in IMG/M
3300008008\|Ga0100399_1095396	Not Available	1339	Open in IMG/M
3300008008\|Ga0100399_1333820	Not Available	536	Open in IMG/M
3300008009\|Ga0100394_1324641	Not Available	676	Open in IMG/M
3300008009\|Ga0100394_1327887	Not Available	672	Open in IMG/M
3300008009\|Ga0100394_1388135	Not Available	596	Open in IMG/M
3300008009\|Ga0100394_1484029	Not Available	510	Open in IMG/M
3300008010\|Ga0100397_1184021	Not Available	739	Open in IMG/M
3300008010\|Ga0100397_1272193	Not Available	555	Open in IMG/M
3300008011\|Ga0100396_1341238	Not Available	529	Open in IMG/M
3300008011\|Ga0100396_1348096	Not Available	522	Open in IMG/M
3300008017\|Ga0100383_1026623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2484	Open in IMG/M
3300008017\|Ga0100383_1106339	Not Available	1092	Open in IMG/M
3300008018\|Ga0100382_1034867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2051	Open in IMG/M
3300008020\|Ga0100398_1130362	Not Available	1320	Open in IMG/M
3300008020\|Ga0100398_1227565	Not Available	850	Open in IMG/M
3300008020\|Ga0100398_1444672	Not Available	508	Open in IMG/M
3300008085\|Ga0100378_1136196	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Candidatus Omnitrophica bacterium	1366	Open in IMG/M
3300008085\|Ga0100378_1301319	Not Available	748	Open in IMG/M
3300008086\|Ga0100388_10506559	Not Available	553	Open in IMG/M
3300008093\|Ga0100393_10357429	Not Available	690	Open in IMG/M
3300008094\|Ga0100387_10104865	Not Available	1624	Open in IMG/M
3300008094\|Ga0100387_10118582	Not Available	1496	Open in IMG/M
3300008094\|Ga0100387_10282600	Not Available	820	Open in IMG/M
3300008094\|Ga0100387_10339968	Not Available	720	Open in IMG/M
3300008094\|Ga0100387_10405039	Not Available	637	Open in IMG/M
3300008095\|Ga0100392_1183019	Not Available	1082	Open in IMG/M
3300008255\|Ga0100403_1072338	Not Available	1407	Open in IMG/M
3300008255\|Ga0100403_1097663	Not Available	1147	Open in IMG/M
3300008255\|Ga0100403_1177687	Not Available	764	Open in IMG/M
3300008255\|Ga0100403_1252315	Not Available	604	Open in IMG/M
3300008255\|Ga0100403_1269324	Not Available	578	Open in IMG/M
3300009004\|Ga0100377_1112991	Not Available	1177	Open in IMG/M
3300009004\|Ga0100377_1170846	Not Available	876	Open in IMG/M
3300009004\|Ga0100377_1261843	Not Available	650	Open in IMG/M
3300009004\|Ga0100377_1309328	Not Available	581	Open in IMG/M
3300009004\|Ga0100377_1320340	Not Available	568	Open in IMG/M
3300009004\|Ga0100377_1336409	Not Available	550	Open in IMG/M
3300009424\|Ga0100384_1137502	Not Available	870	Open in IMG/M
3300024995\|Ga0210018_1141479	Not Available	506	Open in IMG/M
3300025008\|Ga0210029_1082588	Not Available	898	Open in IMG/M
3300025017\|Ga0210022_1112543	Not Available	778	Open in IMG/M
3300025018\|Ga0210043_1079165	Not Available	1005	Open in IMG/M
3300025018\|Ga0210043_1100175	Not Available	852	Open in IMG/M
3300025018\|Ga0210043_1125280	Not Available	726	Open in IMG/M
3300025018\|Ga0210043_1140800	Not Available	667	Open in IMG/M
3300025018\|Ga0210043_1167284	Not Available	588	Open in IMG/M
3300025021\|Ga0210017_1042733	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300025021\|Ga0210017_1103419	Not Available	1111	Open in IMG/M
3300025022\|Ga0210056_1066741	Not Available	1565	Open in IMG/M
3300025022\|Ga0210056_1142091	Not Available	888	Open in IMG/M
3300025032\|Ga0210042_1187513	Not Available	693	Open in IMG/M
3300025035\|Ga0210011_1241150	Not Available	671	Open in IMG/M
3300025036\|Ga0210049_1078498	Not Available	1758	Open in IMG/M
3300025036\|Ga0210049_1151499	Not Available	1051	Open in IMG/M
3300025036\|Ga0210049_1158241	Not Available	1015	Open in IMG/M
3300025036\|Ga0210049_1256674	Not Available	693	Open in IMG/M
3300025036\|Ga0210049_1315262	Not Available	589	Open in IMG/M
3300025036\|Ga0210049_1362291	Not Available	529	Open in IMG/M
3300025036\|Ga0210049_1377085	Not Available	513	Open in IMG/M
3300025124\|Ga0210058_1239605	Not Available	613	Open in IMG/M
3300025139\|Ga0210021_1236012	Not Available	662	Open in IMG/M
3300025148\|Ga0210020_1328798	Not Available	502	Open in IMG/M
3300025158\|Ga0210012_1006138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	9083	Open in IMG/M
3300025288\|Ga0210044_10359072	Not Available	752	Open in IMG/M
3300025288\|Ga0210044_10374329	Not Available	729	Open in IMG/M
3300025787\|Ga0210047_1076897	Not Available	759	Open in IMG/M
3300025837\|Ga0210016_1180944	Not Available	843	Open in IMG/M
3300025842\|Ga0210054_1102300	Not Available	1194	Open in IMG/M
3300025842\|Ga0210054_1240343	Not Available	617	Open in IMG/M
3300025844\|Ga0210036_1074458	Not Available	1386	Open in IMG/M
3300025845\|Ga0210053_1236910	Not Available	626	Open in IMG/M
3300025845\|Ga0210053_1239565	Not Available	621	Open in IMG/M
3300025845\|Ga0210053_1313287	Not Available	510	Open in IMG/M
3300025868\|Ga0210051_1095909	Not Available	1666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	68.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	31.20%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003830	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter	Environmental	Open in IMG/M
3300004149	Groundwater microbial communities from aquifer - Crystal Geyser CG03_land_8/20/14_0.80	Environmental	Open in IMG/M
3300004239	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all	Environmental	Open in IMG/M
3300005235	Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20	Environmental	Open in IMG/M
3300005236	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80	Environmental	Open in IMG/M
3300007965	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-25	Environmental	Open in IMG/M
3300007985	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-05	Environmental	Open in IMG/M
3300007986	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-04	Environmental	Open in IMG/M
3300007987	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-03	Environmental	Open in IMG/M
3300007988	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-0102	Environmental	Open in IMG/M
3300008001	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-13	Environmental	Open in IMG/M
3300008002	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14	Environmental	Open in IMG/M
3300008003	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-15	Environmental	Open in IMG/M
3300008004	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-19	Environmental	Open in IMG/M
3300008005	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-09	Environmental	Open in IMG/M
3300008007	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-10	Environmental	Open in IMG/M
3300008008	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-23	Environmental	Open in IMG/M
3300008009	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-18	Environmental	Open in IMG/M
3300008010	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-21	Environmental	Open in IMG/M
3300008011	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-20	Environmental	Open in IMG/M
3300008017	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-07	Environmental	Open in IMG/M
3300008018	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-06	Environmental	Open in IMG/M
3300008020	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-22	Environmental	Open in IMG/M
3300008085	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-02	Environmental	Open in IMG/M
3300008086	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-12	Environmental	Open in IMG/M
3300008093	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17	Environmental	Open in IMG/M
3300008094	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-11	Environmental	Open in IMG/M
3300008095	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300009004	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01	Environmental	Open in IMG/M
3300009424	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-08	Environmental	Open in IMG/M
3300024995	Groundwater microbial communities from aquifer - Crystal Geyser CG09_land_8/20/14_0.10 (SPAdes)	Environmental	Open in IMG/M
3300025008	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-21 (SPAdes)	Environmental	Open in IMG/M
3300025017	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-20 (SPAdes)	Environmental	Open in IMG/M
3300025018	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t (SPAdes)	Environmental	Open in IMG/M
3300025021	Groundwater microbial communities from aquifer - Crystal Geyser CG08_land_8/20/14_0.20 (SPAdes)	Environmental	Open in IMG/M
3300025022	Groundwater microbial communities from aquifer - Crystal Geyser CG07_land_8/20/14_0.80 (SPAdes)	Environmental	Open in IMG/M
3300025032	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-18 (SPAdes)	Environmental	Open in IMG/M
3300025035	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-02 (SPAdes)	Environmental	Open in IMG/M
3300025036	Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025124	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-11 (SPAdes)	Environmental	Open in IMG/M
3300025139	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-17 (SPAdes)	Environmental	Open in IMG/M
3300025148	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-14 (SPAdes)	Environmental	Open in IMG/M
3300025158	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-04 (SPAdes)	Environmental	Open in IMG/M
3300025288	Groundwater microbial communities from aquifer in Utah, USA - Crystal Geyser 4/9/14 3 um filter (SPAdes)	Environmental	Open in IMG/M
3300025787	Groundwater microbial communities from aquifer - Crystal Geyser CG01_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025837	Groundwater microbial communities from aquifer - Crystal Geyser CG02_land_8/20/14_3.00 (SPAdes)	Environmental	Open in IMG/M
3300025842	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-16 (SPAdes)	Environmental	Open in IMG/M
3300025844	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-15 (SPAdes)	Environmental	Open in IMG/M
3300025845	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-12 (SPAdes)	Environmental	Open in IMG/M
3300025868	Groundwater microbial communities from aquifer - Crystal Geyser CG23_combo_of_CG06-09_8/20/14_all (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0051980_101447091	3300003830	Groundwater	LNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA*
Ga0051980_101500152	3300003830	Groundwater	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLVQIASRAILEKLEREKK*
Ga0051980_101539612	3300003830	Groundwater	MAKGKQKILNTRLTPEAFEALKQLGKLYPREISLTQIASRAILEKLEREKK*
Ga0051980_103066692	3300003830	Groundwater	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0066632_102566111	3300004149	Groundwater	LKIKTMSKQKPKVLNARLTPEAFEALKQLGKLYPREVPLTQIASRAILEKLEREK
Ga0066650_103953731	3300004239	Groundwater	VPKQRPKVLNTRLTPEAFEALKLLGKLYPRDISLTQIASRAI
Ga0066637_102865892	3300005235	Groundwater	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAVLEKLKADTHA*
Ga0066637_102871531	3300005235	Groundwater	MPKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLTQIASRAIIEKLKAETHA*
Ga0066636_101457073	3300005236	Groundwater	MMTKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLAQIASRAIIEKLKADTHA*
Ga0066636_101475281	3300005236	Groundwater	KLKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0066636_101693504	3300005236	Groundwater	MPKQKQKVLNTRLTPGAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK*
Ga0066636_102363092	3300005236	Groundwater	LRIKTMPKQKQKVLNTRLTPEAFETLKELGKLYPRDISLTQIASRAIIEKLEREKK*
Ga0066636_102388142	3300005236	Groundwater	MPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVIEKLKAETYA*
Ga0066636_102465593	3300005236	Groundwater	LRIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK*
Ga0066636_102525092	3300005236	Groundwater	MSKQKPKILNTRLTPEAFEALKQLGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0066636_103120892	3300005236	Groundwater	VPEQKQKILNTRLTPEAFAALKELGKLYPREISLTEIASRAILEKLEREKK*
Ga0066636_103196142	3300005236	Groundwater	LRINKIKGGIIMPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0066636_103319251	3300005236	Groundwater	LEIKTTPKQKQKILNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLGREKK*
Ga0066636_103939532	3300005236	Groundwater	MPKQKVLNTRLTPEGFKALKELGKLYPRDISLTQIASLAIIEKLKADTHA*
Ga0066636_104226082	3300005236	Groundwater	MENGGIIVSKQKVLNTRLTPEAFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0066636_104452142	3300005236	Groundwater	MPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEK
Ga0066636_104594552	3300005236	Groundwater	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA*
Ga0100401_12842232	3300007965	Aquifer	MPKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLTQIASRAIIEKLKADTHA*
Ga0100401_13014972	3300007965	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK*
Ga0100381_10927571	3300007985	Aquifer	RRERLRIKTMPKQKQKVLNTRLTPEAFEALKQRGKLYPREISLTQIASRAILEKLEREKK
Ga0100381_12186352	3300007985	Aquifer	MPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100380_102803702	3300007986	Aquifer	MPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100380_102948301	3300007986	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAILEKLGREKK*
Ga0100379_101024202	3300007987	Aquifer	VPEQKQKILNTRLTPEAFEALKQLGKLYPREISLTQIASRAILEKLEREKK*
Ga0100402_12264593	3300007988	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA*
Ga0100389_12233662	3300008001	Aquifer	MRKWRRGELKTNKIKGGVMVSKQKQKVLNTRLTPEAFDALKQLGKLYPREISLTQIASQAVIENLKAETYA*
Ga0100389_12317212	3300008001	Aquifer	MAKGKQKILNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA*
Ga0100389_13122282	3300008001	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREASLTQIASRAILEKLEREKK*
Ga0100389_13132662	3300008001	Aquifer	MSKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVIEKLKAETYA*
Ga0100389_13480371	3300008001	Aquifer	LEIKTTPKQKQKILNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLEREKK*
Ga0100389_13801093	3300008001	Aquifer	LITTRWRDGELRINKIKGGIIMPKQKQKVLNTRLTPEAFDALKQLGKLYPREISLTQIASQAVIEKLKAETYA*
Ga0100390_102630161	3300008002	Aquifer	MRWREGELKTNKIKGGIIVSKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVIEKLKAETYA*
Ga0100390_103814852	3300008002	Aquifer	MRKWKGEKLKTNKIRGGIIMPKQKQKVLNTRLTPEAFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100390_103893732	3300008002	Aquifer	MPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100390_104916562	3300008002	Aquifer	MENGGIIVSKQKVLNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLEREKK*
Ga0100391_13165143	3300008003	Aquifer	MESGGIIVSKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVIEKLKAETYA*
Ga0100391_13917972	3300008003	Aquifer	MPKQKQKILNTRLTPEAFKALKQLGKLYPRGISLTQIASRAILEKLEREKK*
Ga0100391_13992803	3300008003	Aquifer	MENGGIIVSKQKVLNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLERE
Ga0100395_11031393	3300008004	Aquifer	IKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100395_11940981	3300008004	Aquifer	MSKQKQKVLNTRLTPEGFAALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100395_13115532	3300008004	Aquifer	LKTKTKGGVIVSKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100385_14921202	3300008005	Aquifer	MENGGIIMSKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAIIEKLKAETYA*
Ga0100386_100893943	3300008007	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100386_101079744	3300008007	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYAREVSLTQIASQAVIEKLKAETYA*
Ga0100386_103327782	3300008007	Aquifer	MPKQKQKVLNTRLTPEAIETLKEIGKLYPRDISLTQIASRAIIEKLEREKK*
Ga0100386_104468102	3300008007	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREISLTQIASRAILEKLEREKK*
Ga0100399_10953964	3300008008	Aquifer	ANSIIKRWRRERLKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100399_13338201	3300008008	Aquifer	MPKQKQKVLNTRLTPEGFKALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100394_13246413	3300008009	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQI
Ga0100394_13278871	3300008009	Aquifer	VLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100394_13881351	3300008009	Aquifer	MLKIKTMPKQKQKVLNTRLTPEAFAALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100394_14840292	3300008009	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100397_11840213	3300008010	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAVLEK
Ga0100397_12721931	3300008010	Aquifer	MSKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAIIEKLKAETYA*
Ga0100396_13412382	3300008011	Aquifer	TMRWRGEKLEIKTMPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100396_13480961	3300008011	Aquifer	TMRWRGEKLEIKTMPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100383_10266232	3300008017	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAILEKLEREKK*
Ga0100383_11063391	3300008017	Aquifer	MVKQKRKVLNTRLTPEAFEALKELGKLYPREISLTEIASRAIIEKLKAETYA*
Ga0100382_10348676	3300008018	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGNLYPREASLTQIASRAILEKLEREKK*
Ga0100398_11303621	3300008020	Aquifer	KQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA*
Ga0100398_12275651	3300008020	Aquifer	KLKIKTMPKQKQKVLNTRLTPEAFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA*
Ga0100398_14446721	3300008020	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAI
Ga0100378_11361964	3300008085	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLVQIASRAI
Ga0100378_13013192	3300008085	Aquifer	MEKRGIIMSKQKQKVLNTRLTPEAFAALKQLGKLYPREVSLTQIASRAIIEKLRAETYA*
Ga0100388_105065592	3300008086	Aquifer	MPKQKQKMLNTRLTPEAFEALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100393_103574292	3300008093	Aquifer	MGEKLEIKTTPKQKQKILNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLGREKK
Ga0100387_101048654	3300008094	Aquifer	MPKQKQKVLNTRLTPGAFEALKQLGKLYPREVSLTQIASRAILEKLEREKK*
Ga0100387_101185821	3300008094	Aquifer	TPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100387_102826002	3300008094	Aquifer	MRKWREGELRTNKIKGGIIMPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA*
Ga0100387_103399682	3300008094	Aquifer	LTPEGFKALKELGKLYPRDISLTQIASRAILEKLKAETYA*
Ga0100387_104050392	3300008094	Aquifer	MESGGIIVSKQKQKVLNTRLTPEAFEALKQLGKLYPREASLTQIASRAIIEKLKAETYA*
Ga0100392_11830194	3300008095	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAI
Ga0100403_10723383	3300008255	Aquifer	VPKQKPKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASQAVLEKLKADTHA*
Ga0100403_10976632	3300008255	Aquifer	MAKGKQKILNTRLTPEAFAALKELGKLYPREISLTEIASRAILEKLEREKK*
Ga0100403_11776873	3300008255	Aquifer	MSKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLTQIASRAIIEKLKADTHA*
Ga0100403_12523152	3300008255	Aquifer	LKIKTKGGIIVSKQKVLNTRLTPEAFEALKQLGKLYPREVSLTEIASRAIIEKLKAETYA
Ga0100403_12693242	3300008255	Aquifer	MPKQKQKVLNTRLTPEGFKALKELGKLYPRDISLTQIASLAIIEKLKAETYA*
Ga0100377_11129911	3300009004	Aquifer	MPKQKQKVLNTRLTPGAFEALKQLGKLYPREASLTQIASRAILEKLEREKK*
Ga0100377_11708463	3300009004	Aquifer	MENGGIIMPKQKQKVLNTRLTPEAFEALKQLGKLYPREISLTQIASQAVIEKLKAETYA*
Ga0100377_12618433	3300009004	Aquifer	MSKQKQKVLNTRLTPEGFAALKELGKLYPRDISLTQIASRAILEKLKAE
Ga0100377_13093282	3300009004	Aquifer	MLKIKTMPKQKQKVLNTRLTPEAFETLKELGKLYPRDISLTQIASRAIIEKLEREKK*
Ga0100377_13203401	3300009004	Aquifer	QKVLNTRLTPEAFEALKQLGKLYPREASLTQIASRAILEKLEREKK*
Ga0100377_13364091	3300009004	Aquifer	LKIDKIKGGIIMPKQNQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAIIEKLKAETYA
Ga0100384_11375021	3300009424	Aquifer	MENGGIIVSKQKVLNTRLTPEAFEALKQLGKLYPREVSLVQIASRAILEKLEREKK*
Ga0210018_11414791	3300024995	Groundwater	NTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA
Ga0210029_10825883	3300025008	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA
Ga0210022_11125432	3300025017	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA
Ga0210043_10791653	3300025018	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAETYA
Ga0210043_11001751	3300025018	Aquifer	MAKGKQKILNTRLTPEAFEALKQLGKLYPREISLTQIASRAILEKLEREKK
Ga0210043_11252801	3300025018	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREASLTQIASRAILEKLEREKK
Ga0210043_11408002	3300025018	Aquifer	MPKQKQKVLNTRLTPEGFKALKELGKLYPRDISLTQIASLAIIEKLKAETYA
Ga0210043_11672841	3300025018	Aquifer	MPKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLTQIASRAIIEKLKADTHA
Ga0210017_10427332	3300025021	Groundwater	MSKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLTQIASRAIIEKLKADTHA
Ga0210017_11034192	3300025021	Groundwater	MPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAVLEKLKADTHA
Ga0210056_10667411	3300025022	Groundwater	VPEQKQKILNTRLTPEAFAALKELGKLYPREISLTEIASRAILEKLEREKK
Ga0210056_11420912	3300025022	Groundwater	MMTKQKQKVLNTRLTPEAFAALKQLGKLYPRDISLAQIASRAILEKLKAETYV
Ga0210042_11875132	3300025032	Aquifer	LRIKTMPKQKQKVLNTRLTPEAFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA
Ga0210011_12411502	3300025035	Aquifer	MPKQKQKVLNTRLTPGAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK
Ga0210049_10784981	3300025036	Groundwater	MPKQKQKVLNTRLTPRAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK
Ga0210049_11514992	3300025036	Groundwater	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLVQIASRAILEKLEREKK
Ga0210049_11582413	3300025036	Groundwater	MAKGKQKILNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA
Ga0210049_12566743	3300025036	Groundwater	MVSKKVLNTRLTPEAFAALKELGKIYPREISLAEIASRSIIEKLNAERRDKK
Ga0210049_13152623	3300025036	Groundwater	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASRAIIEKLKAET
Ga0210049_13622912	3300025036	Groundwater	LEIKTTPKQKQKILNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLEREKK
Ga0210049_13770851	3300025036	Groundwater	LKIDKIKGGIIMPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAIIEKLKAETYA
Ga0210058_12396052	3300025124	Aquifer	LRIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAIIEKLKAETYA
Ga0210021_12360123	3300025139	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA
Ga0210020_13287982	3300025148	Aquifer	LEIKTMPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAILEKLKAETYA
Ga0210012_10061382	3300025158	Aquifer	MIGTKIKTKGGIIMPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA
Ga0210044_103590722	3300025288	Groundwater	MPKQKQKVLNTRLTPEGFEALKELGKLYPRDISLTQIASRAIIEKLKAETYA
Ga0210044_103743292	3300025288	Groundwater	MPKQKQKVLNTRLTPEAFDALKQLGKLYPREVSLTQIASQAVLEKLKAETYA
Ga0210047_10768972	3300025787	Groundwater	MAKGKQKILNTRLTPEAFEALKQLGKLYPREVSLAQIASRAILEKLEREKK
Ga0210016_11809441	3300025837	Groundwater	MSKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRAI
Ga0210054_11023001	3300025842	Aquifer	MPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRA
Ga0210054_12403433	3300025842	Aquifer	KQWRRERLKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA
Ga0210036_10744581	3300025844	Aquifer	KQKVLNTRLTPEAFEALKQLGKLYPREASLTQIASRAILEKLEREKK
Ga0210053_12369101	3300025845	Aquifer	LMENGGIIVSKQKVLNTRLTPEAFKALKQLGKLYPRDISLTQIASRAILEKLEREKK
Ga0210053_12395651	3300025845	Aquifer	WRRERLRIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLTQIASQAVLEKLKAETYA
Ga0210053_13132871	3300025845	Aquifer	LKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPREVSLAQIASRA
Ga0210051_10959091	3300025868	Groundwater	TMRWRREKLKIKTMPKQKQKVLNTRLTPEAFEALKQLGKLYPRDISLTQIASQAVLEKLKAETYA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067407

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences