Metagenome / Metatranscriptome Family F067354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067354
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	62 residues
Representative Sequence	MSTLFNNETPRILPKTAFDKKSFLEIVSPLVKLDIIKEGEGRKCRNAHKLDLTNSIYEKIDE
Number of Associated Samples	80
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	28.00 %
% of genes from short scaffolds (< 2000 bps)	64.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.800 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (58.400 % of family members)
Environment Ontology (ENVO)	Unclassified (91.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (93.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.56% β-sheet: 0.00% Coil/Unstructured: 84.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF06210	DUF1003	16.00
PF00154	RecA	0.80
PF02467	Whib	0.80
PF03214	RGP	0.80
PF07728	AAA_5	0.80
PF03449	GreA_GreB_N	0.80
PF00583	Acetyltransf_1	0.80
PF02195	ParBc	0.80
PF01471	PG_binding_1	0.80
PF00877	NLPC_P60	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	16.00
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.80
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.80
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
All Organisms	root	All Organisms	31.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
cellular organisms	root	All Organisms → cellular organisms	28.80 %
Viruses	superkingdom	All Organisms → Viruses	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.60 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.80 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	8.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.80 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonosporobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	8.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.80 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonosporobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	8.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.80 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	3.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.80 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	8.00 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.80 %
Mycobacterium europaeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	3.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.40 %
Ktedonosporobacter rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c008910	Not Available	1857	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1004135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9393	Open in IMG/M
3300002091\|JGI24028J26656_1000343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	16046	Open in IMG/M
3300002092\|JGI24218J26658_1000122	Not Available	57546	Open in IMG/M
3300002301\|JGI24891J29808_1001333	Not Available	4994	Open in IMG/M
3300002301\|JGI24891J29808_1002042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3165	Open in IMG/M
3300002301\|JGI24891J29808_1007344	Not Available	1091	Open in IMG/M
3300002933\|G310J44882_10012473	Not Available	2440	Open in IMG/M
3300003375\|JGI26470J50227_1007335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2923	Open in IMG/M
3300003375\|JGI26470J50227_1007342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2922	Open in IMG/M
3300003375\|JGI26470J50227_1043412	Not Available	821	Open in IMG/M
3300003783\|Ga0007850_1000007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24644	Open in IMG/M
3300003787\|Ga0007811_1001566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	3267	Open in IMG/M
3300003796\|Ga0007865_1005201	Not Available	1521	Open in IMG/M
3300003797\|Ga0007846_1001325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3658	Open in IMG/M
3300003797\|Ga0007846_1018650	Not Available	608	Open in IMG/M
3300003798\|Ga0007842_1013718	Not Available	520	Open in IMG/M
3300003804\|Ga0007817_1000286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4299	Open in IMG/M
3300003804\|Ga0007817_1001164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2193	Open in IMG/M
3300003806\|Ga0007864_1006989	Not Available	924	Open in IMG/M
3300003813\|Ga0007879_1002615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2913	Open in IMG/M
3300003814\|Ga0007877_1006447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	1589	Open in IMG/M
3300003814\|Ga0007877_1028064	Not Available	599	Open in IMG/M
3300003815\|Ga0007856_1013292	Not Available	540	Open in IMG/M
3300003819\|Ga0007878_1019365	Not Available	583	Open in IMG/M
3300003943\|Ga0007808_1000117	Not Available	2454	Open in IMG/M
3300004095\|Ga0007829_10007521	Not Available	2095	Open in IMG/M
3300004684\|Ga0065168_1005204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	2076	Open in IMG/M
3300004684\|Ga0065168_1010955	Not Available	1421	Open in IMG/M
3300004684\|Ga0065168_1033447	Not Available	810	Open in IMG/M
3300004685\|Ga0065177_1018349	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1311	Open in IMG/M
3300004686\|Ga0065173_1047895	Not Available	775	Open in IMG/M
3300004687\|Ga0065174_1094538	Not Available	556	Open in IMG/M
3300004691\|Ga0065176_1001419	Not Available	2056	Open in IMG/M
3300004692\|Ga0065171_1001226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4115	Open in IMG/M
3300004694\|Ga0065170_1049275	Not Available	565	Open in IMG/M
3300004806\|Ga0007854_10237795	Not Available	767	Open in IMG/M
3300004807\|Ga0007809_10045817	All Organisms → Viruses → Predicted Viral	1439	Open in IMG/M
3300004807\|Ga0007809_10059565	Not Available	1226	Open in IMG/M
3300004807\|Ga0007809_10138224	Not Available	724	Open in IMG/M
3300004807\|Ga0007809_10210896	Not Available	558	Open in IMG/M
3300006071\|Ga0007876_1000315	All Organisms → cellular organisms → Bacteria → Terrabacteria group	19497	Open in IMG/M
3300006071\|Ga0007876_1026273	Not Available	1619	Open in IMG/M
3300006071\|Ga0007876_1107152	Not Available	719	Open in IMG/M
3300006100\|Ga0007806_1099262	Not Available	536	Open in IMG/M
3300006104\|Ga0007882_10011732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4307	Open in IMG/M
3300006104\|Ga0007882_10088146	All Organisms → Viruses → Predicted Viral	1179	Open in IMG/M
3300006104\|Ga0007882_10232548	Not Available	614	Open in IMG/M
3300006108\|Ga0007862_1083022	Not Available	615	Open in IMG/M
3300006112\|Ga0007857_1050149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	805	Open in IMG/M
3300006117\|Ga0007818_1043517	Not Available	860	Open in IMG/M
3300006119\|Ga0007866_1096020	Not Available	545	Open in IMG/M
3300009151\|Ga0114962_10016090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5373	Open in IMG/M
3300009151\|Ga0114962_10056410	Not Available	2566	Open in IMG/M
3300009151\|Ga0114962_10068586	Not Available	2277	Open in IMG/M
3300009151\|Ga0114962_10094643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1870	Open in IMG/M
3300009151\|Ga0114962_10116132	Not Available	1647	Open in IMG/M
3300009151\|Ga0114962_10116873	Not Available	1640	Open in IMG/M
3300009151\|Ga0114962_10269161	Not Available	964	Open in IMG/M
3300009218\|Ga0103848_1029135	Not Available	1049	Open in IMG/M
3300013093\|Ga0164296_1000506	Not Available	45972	Open in IMG/M
3300013093\|Ga0164296_1353564	Not Available	546	Open in IMG/M
3300013093\|Ga0164296_1390231	Not Available	516	Open in IMG/M
3300013285\|Ga0136642_1002243	Not Available	7698	Open in IMG/M
3300020685\|Ga0214256_102853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1815	Open in IMG/M
3300020685\|Ga0214256_118188	Not Available	574	Open in IMG/M
3300020710\|Ga0214198_1016647	Not Available	930	Open in IMG/M
3300020710\|Ga0214198_1021887	Not Available	793	Open in IMG/M
3300020718\|Ga0214178_1038365	Not Available	595	Open in IMG/M
3300020731\|Ga0214170_1052660	Not Available	595	Open in IMG/M
3300020733\|Ga0214172_1041240	Not Available	669	Open in IMG/M
3300021125\|Ga0214211_1028754	Not Available	525	Open in IMG/M
3300021127\|Ga0214193_1002521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3141	Open in IMG/M
3300021130\|Ga0214180_1005126	Not Available	1946	Open in IMG/M
3300022602\|Ga0248169_105264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	12979	Open in IMG/M
3300022602\|Ga0248169_130340	All Organisms → Viruses → Predicted Viral	2893	Open in IMG/M
3300022602\|Ga0248169_139386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2317	Open in IMG/M
3300025336\|Ga0208619_116349	Not Available	548	Open in IMG/M
3300025339\|Ga0208502_1008246	Not Available	899	Open in IMG/M
3300025339\|Ga0208502_1008404	Not Available	890	Open in IMG/M
3300025346\|Ga0208737_1000024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7526	Open in IMG/M
3300025357\|Ga0208383_1017276	Not Available	872	Open in IMG/M
3300025358\|Ga0208504_1000001	Not Available	106865	Open in IMG/M
3300025369\|Ga0208382_1001332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6894	Open in IMG/M
3300025369\|Ga0208382_1012937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1249	Open in IMG/M
3300025369\|Ga0208382_1016720	Not Available	1038	Open in IMG/M
3300025372\|Ga0207957_1010623	Not Available	1269	Open in IMG/M
3300025379\|Ga0208738_1009568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	1691	Open in IMG/M
3300025381\|Ga0208871_1000057	Not Available	37427	Open in IMG/M
3300025381\|Ga0208871_1000333	Not Available	15377	Open in IMG/M
3300025381\|Ga0208871_1000790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8845	Open in IMG/M
3300025381\|Ga0208871_1004425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2736	Open in IMG/M
3300025381\|Ga0208871_1009906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonosporobacteraceae → Ktedonosporobacter → Ktedonosporobacter rubrisoli	1597	Open in IMG/M
3300025383\|Ga0208250_1000980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7526	Open in IMG/M
3300025387\|Ga0207959_1028121	Not Available	904	Open in IMG/M
3300025391\|Ga0208740_1029662	Not Available	800	Open in IMG/M
3300025391\|Ga0208740_1044277	Not Available	623	Open in IMG/M
3300025396\|Ga0208874_1042217	Not Available	656	Open in IMG/M
3300025402\|Ga0208876_1002476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4053	Open in IMG/M
3300025405\|Ga0208381_1000005	Not Available	132618	Open in IMG/M
3300025405\|Ga0208381_1000017	Not Available	70338	Open in IMG/M
3300025407\|Ga0208378_1066928	Not Available	562	Open in IMG/M
3300025410\|Ga0208875_1011148	Not Available	1622	Open in IMG/M
3300025423\|Ga0208746_1019271	Not Available	1237	Open in IMG/M
3300025423\|Ga0208746_1042697	Not Available	735	Open in IMG/M
3300025429\|Ga0208500_1040600	Not Available	555	Open in IMG/M
3300025435\|Ga0208618_1000573	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16523	Open in IMG/M
3300025598\|Ga0208379_1065305	Not Available	917	Open in IMG/M
3300025598\|Ga0208379_1084440	Not Available	775	Open in IMG/M
3300025598\|Ga0208379_1137793	Not Available	558	Open in IMG/M
3300025648\|Ga0208507_1164754	Not Available	600	Open in IMG/M
3300025648\|Ga0208507_1195693	Not Available	528	Open in IMG/M
3300025781\|Ga0208386_1000871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7790	Open in IMG/M
3300027741\|Ga0209085_1251478	Not Available	693	Open in IMG/M
3300027749\|Ga0209084_1015544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4300	Open in IMG/M
3300027749\|Ga0209084_1068733	Not Available	1638	Open in IMG/M
3300027749\|Ga0209084_1135534	Not Available	1046	Open in IMG/M
3300027749\|Ga0209084_1342465	Not Available	550	Open in IMG/M
3300027896\|Ga0209777_10253682	Not Available	1382	Open in IMG/M
3300031759\|Ga0316219_1000759	Not Available	40159	Open in IMG/M
3300031884\|Ga0316220_1260128	Not Available	579	Open in IMG/M
3300032562\|Ga0316226_1177960	Not Available	905	Open in IMG/M
3300032579\|Ga0316228_1165148	Not Available	743	Open in IMG/M
3300032677\|Ga0316227_1118930	Not Available	1001	Open in IMG/M
3300032677\|Ga0316227_1300016	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	84.00%
Lake	Environmental → Aquatic → Freshwater → Lake	15.20%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	62.40%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	15.20%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	8.00%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	7.20%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	6.40%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	58.40%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	8.00%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	7.20%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	5.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	4.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.80%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003819	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH23Jun09	Environmental	Open in IMG/M
3300003943	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004687	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (version 2)	Environmental	Open in IMG/M
3300004691	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006117	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009218	Microbial communities of water from Amazon river, Brazil - RCM1	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300020685	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021130	Freshwater microbial communities from Trout Bog Lake, WI - 16OCT2007 epilimnion	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025346	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025405	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE13Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025435	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025648	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0089102	3300000176	Freshwater	MSTLFNNETPRILPKVSFNKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE*
TBL_comb48_EPIDRAFT_10041358	3300000439	Freshwater	MSTLFNNETPRILPRTAYVHKSFLEIVSPLVKLDIIKEGEGRRARNASKLNLSNSIYEKLEDEE*
JGI24028J26656_100034314	3300002091	Lentic	MSTLFNDQAPKILPKTAYNKFSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED*
JGI24218J26658_100012213	3300002092	Lentic	MSTLFNNETPRILPKVSFNKKSFLDIVSPLVKLDIIKEGEGSTCRNAHKLDLTDSIYEKIDAE*
JGI24891J29808_10013332	3300002301	Lentic	MSTLFNNDSPRILPKQAFQKKSFLSAVSPLVKIDIIKEGEGIKCRNAHKLNLKDSIYEKIDEE*
JGI24891J29808_10020422	3300002301	Lentic	MSTLFNNESPRLLPKAAFNKKSFLEVVSPLVKLDIIKEGEGRRCRNASKLNLANSIYEKIDEE*
JGI24891J29808_10073442	3300002301	Lentic	MSTLFNNEIPRILPKQAFNRLSFLNIVSPLIKLEIIKEGEGFKCRNAHKLNLSNSIYEKIDEE*
G310J44882_100124732	3300002933	Freshwater	MSTLFNDQAPRILPKTAYNKVSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED*
JGI26470J50227_10073352	3300003375	Freshwater	MSTLFNQEPRILPKTAYNKVSFLDVVSPLVKIEIINEGKGRICRNAHKLNLANSIYEKIED*
JGI26470J50227_10073422	3300003375	Freshwater	MSTLFNNEIPRILPKTAFDKKSFLGVVSPLIKLEIIKEGEGRICRNANKLNLANSIYEKIED*
JGI26470J50227_10434123	3300003375	Freshwater	MSTLFNNETPRILPKTAFDKKSFLSIVSPLVKLDIIKEGEGAKCRNASKLDLTNSIYEKIDEE*
Ga0007850_100000711	3300003783	Freshwater	MSTLFNNETPRMLPKQAFNKASFLSVVSPLVKLEIIKEGEGLKCRNAHKLNLADSIYEKIED*
Ga0007811_10015662	3300003787	Freshwater	MSTLFNNETPRILPKTAFDKKSFLEIVSPLVKLDIIKEGEGRKCRNAHKLDLTNSIYEKIDE*
Ga0007865_10052012	3300003796	Freshwater	MSTLFNNEPPRILPKKAFNKRSFLDIVSPLIKLDIIKEGEGLKCRNAQKLVLTNSIYEKISE*
Ga0007846_10013255	3300003797	Freshwater	MSRLFDDRSPRILPKTSFNKSSFLDVVSPLVKIDIIKEGEGLTARNANKLNLENSIYEKLEDDD*
Ga0007846_10186501	3300003797	Freshwater	RTCIIEPETPMSTLFNNETPRLLPKAAFNKKSFLEVVSPLVKLDIIKEGEGSKCRNAHKLDLRNSIYEKIDA*
Ga0007842_10137182	3300003798	Freshwater	MSTLFNNETPRILPKVSFQKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE*
Ga0007817_10002865	3300003804	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLEVVSPLVKLDIIKEGEGSKCRNAHKLDLRNSIYEKIDA*
Ga0007817_10011645	3300003804	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGRIARNAHKLDLRNSIYEKIED*
Ga0007864_10069893	3300003806	Freshwater	MSTLFNDQAPRILPKTAYNKVSFLSVVSPLIKLEXXKEGEGRICRNAHKLNLANSIYEKIED*
Ga0007879_10026151	3300003813	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYEKIDEA*
Ga0007877_10064471	3300003814	Freshwater	LFNNEPPRLLPKQAFNKRSFLNVVSPLVKLEIIKEGEGRICRNAHKLNLANSIYEKLED*
Ga0007877_10280641	3300003814	Freshwater	MSTLFNNETPRILPKVALNKQSFLSVVSPLIKLDIIKEGEGRICRNAHKLNLANSIY
Ga0007856_10132921	3300003815	Freshwater	IYMSTLFNNETPRILPKTAFDKKSFLEIVSPLVKLDIIKEGEGRKCRNAHKLDLTNSIYEKIDE*
Ga0007878_10193652	3300003819	Freshwater	MSTLFNNEPPRLLPKQAFNKRSFLNVVSPLVKLEIIKEGEGRICRNAHKLNLANSIYEKLED*
Ga0007808_10001172	3300003943	Freshwater	MSTLFNNESPRILPKAAFNKASFLDVVSPLVKMDIIKEGEGRRCRNAHKLDLTNSIYEKIED*
Ga0007829_100075212	3300004095	Freshwater	MSTLFNKETPRMLPKTAFNKASFLDVVSPLVKLDIIKEGEGRRCRNAHKLDLSNSIYEKIEE*
Ga0065168_10052042	3300004684	Freshwater	MSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKEGEGRICRNAHKLNLANSIYEKLED*
Ga0065168_10109552	3300004684	Freshwater	MSTLFNNETPRILPKVSFQKKSFLEIVSPLVKLDIIKEGEGRVCRNAQKLDLTNSIYEKIDAE*
Ga0065168_10334472	3300004684	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGIKCRNAHKLDLSNSIYEKIDA*
Ga0065177_10183492	3300004685	Freshwater	MSTLFNNESPRMLPKVSYNKHSFLSAVSPLVKLDIIKEGEGKIARNASKLNLDDSIYEKIDED*
Ga0065173_10478952	3300004686	Freshwater	MSTLFNNETPRILPKVALNKQSFLSVVSPLIKLDIIKEGEGRICRNAHKLNLANSIYEKIED*
Ga0065174_10945382	3300004687	Freshwater	VSTLFNNETPRILPKVSFNRHSFLDTVSPLVKIDIIKEGEGKIARNAKKLDLSNSIYEKLEDED*
Ga0065176_10014194	3300004691	Freshwater	MSRLFDDRSPRILPKTSFNKSSFLDIVSPLVKIDIIKEGEGLTARNANKLNLENSIYEKLEDDD*
Ga0065171_10012262	3300004692	Freshwater	MSTLFNNESPRLLPKAAFNKKSFLEVVSPLVKLEIIKESEGRKARNARKLDLTNSIYEKIDEE*
Ga0065170_10492752	3300004694	Freshwater	PNRKGWSMSQLFNNETPRILPKVSFNKQSFLDIVSPLVKMDIIKEGEGKIARNSHKLNLENSIYEKLEDED*
Ga0007854_102377952	3300004806	Freshwater	MSRLFNDETPRILPKTSFNKKSFLEIVSPLTKIDIIKEGEGRKARNASKLDLSNSIYEKIDEE*
Ga0007809_100458172	3300004807	Freshwater	MSTLFNRETPRILPKTSFNKESFLNVVSPLVKLEIIKEGEGFKCRNAHKLNLANSIYEKIED*
Ga0007809_100595652	3300004807	Freshwater	MSTLFNNETPRMLPKAAFNKKSFLSIVSPLVKLEIIKEGEGLKTRNAHKLVLSDSIYEKIDED*
Ga0007809_101382242	3300004807	Freshwater	MSQLFNNETPRILPKVSFNKQSFLDIVSPLVKMDIIKEGEGKIARNSHKLNLENSIYEKLEDED*
Ga0007809_102108961	3300004807	Freshwater	AELVSTLFNNETPRILPKVSFNRHSFLDTVSPLVKIDIIKEGEGKIARNAKKLDLSNSIYEKLEDED*
Ga0007876_10003158	3300006071	Freshwater	MSTLFNNEIPRMLPKAAFNKQSFLEVVSPLIKLDIIKEGEGRKARNAHKLDLTNSIYEKIDE*
Ga0007876_10262733	3300006071	Freshwater	MNNPFNSPKPRILPKVGYAKTSFNIVSPLIKLDIIKEGEGRKCRNASKLDLSNSIYEKIENE*
Ga0007876_11071522	3300006071	Freshwater	MSTLFNNETPRMLPKQAFNKRSFLNIVSPIVKLEIIKEGEGRICRNAHKLNLSNSIYEKLED*
Ga0007806_10992621	3300006100	Freshwater	MSTLFNNETPRMLPKQAFNKRSFLNIVSPIVKLEIIKEGEGRICRNAHKLNLS
Ga0007882_100117322	3300006104	Freshwater	MSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKESEGRICRNAHKLNLANSIYEKLED*
Ga0007882_100881463	3300006104	Freshwater	MSNPFSPDSTPRMLPKQAKVKTALTIVSPLVKLDIIKEGEGLTCRNANKLDLTDSIYEKIDED*
Ga0007882_102325482	3300006104	Freshwater	STLFNNETPRMLPKQAFNKASFLSVVSPLVKLEIIKEGEGLKCRNAHKLNLADSIYEKIED*
Ga0007862_10830221	3300006108	Freshwater	NESPRILPKAAFNKASFLDVVSPLVKMDIIKEGEGRRCRNAHKLDLTNSIYEKIED*
Ga0007857_10501493	3300006112	Freshwater	LNALINRHTNFLGVFMSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKEGEGRICRNAHKLNLANSIYEKLED*
Ga0007818_10435171	3300006117	Freshwater	MSTLFNNETPRILPKVSFQKKSFLEIVSPLVKLDIIKEGEGRVCRNAQKLDLTNS
Ga0007866_10960202	3300006119	Freshwater	DNSAPSVLPKTAVAKTALNITSPLVKLEIIKEGEGQTARNANKLDLSNSIYEKIDED*
Ga0114962_100160907	3300009151	Freshwater Lake	MSQLFNDSNPNILPKVSFNKHSFLDIVSPLVKIDIIKEGEGKIARNAGKLDLSNSIYEKLDEDD*
Ga0114962_100564102	3300009151	Freshwater Lake	MSTLFNDQSPRLLPRTAFNKQSFLNVVSPLIKLDIIKEGEGSKCRNAHKLNLTDSIYEKIDED*
Ga0114962_100685862	3300009151	Freshwater Lake	MSTLFNNETPRMLPKVALNKTSFLSIVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYEKIEED*
Ga0114962_100946433	3300009151	Freshwater Lake	MSTLFNNETPRILPKFSFNKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE*
Ga0114962_101161322	3300009151	Freshwater Lake	MSTLFNDETPNILPKVSFNKHSFLDIVSPLVKIDIIKEGEGKTARNSSKLDLSNSIYEKLDEED*
Ga0114962_101168732	3300009151	Freshwater Lake	MSRLFDDRSPSILPKVSFNKTSFLDIVSPLVKIDIIKEGEGVKARNAHKLNLENSIYEKIDEEF*
Ga0114962_102691612	3300009151	Freshwater Lake	MSTLFNNDIPRMLPKVALNKKSFLDIVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYDKLED*
Ga0103848_10291352	3300009218	River Water	MSTLFNNETPRVLPKTALNKQSFLEIVSPLVKLEIIKEGEGLRARNANKLDLTNSIYEKIEDEA*
Ga0164296_100050616	3300013093	Freshwater	MSTLFNNEAPRILPKSAFNKKSFLEIVSPLIKLDIIKEGEGLKCRNSHKLDLTNSIYEKIDEE*
Ga0164296_13535641	3300013093	Freshwater	ENHMSTLFNNETPRILPKVSFQKKSFLEIVSPLVKLDIIKEGEGRVCRNAQKLDLTNSIYEKIDAE*
Ga0164296_13902312	3300013093	Freshwater	ETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGIKCRNAHKLDLSNSIYEKIDA*
Ga0136642_10022432	3300013285	Freshwater	MSQLFNDSNPNILPKVSFNKHSFLDIVSPLVKIDIIKEGEGKIARNAGKLDLTNSIYEKLDEDD*
Ga0214256_1028534	3300020685	Freshwater	MSTLFNDQAPRILPKTAYNKVSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0214256_1181882	3300020685	Freshwater	MSTLFNNETPRILPKVSFQKKSFLEIVSPLVKLDIIKEGEGRVCRNAQKLDLTNSIYEKIDAE
Ga0214198_10166472	3300020710	Freshwater	MSTLFDNEKPRILPKAAFNKSSFLDVVSPLVKLDIIKEGEGRKARNAHKLNLENSIYEKIDGE
Ga0214198_10218872	3300020710	Freshwater	MSRLFDDRSPSILPKVSFNKSSFLDIVSPLVKIDIIKEGEGLTARNANKLNLENSIYEKLEDDD
Ga0214178_10383652	3300020718	Freshwater	NDQAPRILPKTAYNKVSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0214170_10526602	3300020731	Freshwater	MSTLFNNETPRILPRTAYVHKSFLEIVSPLVKLDIIKEGEGRRARNASKLNLSNSIYEKLEDEE
Ga0214172_10412402	3300020733	Freshwater	MSTLFNNESPRLLPKAAFNKKSFLEVVSPLVKLEIIKESEGRKARNARKLDLTNSIYEKIDEE
Ga0214211_10287542	3300021125	Freshwater	PMSTLFNDQAPRILPKTAYNKVSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0214193_10025212	3300021127	Freshwater	MSTLFNDETPNILPKVSFNKRSFLDIVSPLVKIDIIKEGEGKTARNSSKLDLSNSIYEKLDEED
Ga0214180_10051262	3300021130	Freshwater	MSTLFNNESPRLLPKAAFNKKSFLEVVSPLVKLEIIKESEGRKARNARKLDLTNSIYEK
Ga0248169_1052644	3300022602	Freshwater	MSTLFNNETPRILPKVSFNKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE
Ga0248169_1303404	3300022602	Freshwater	MSTLFNNEIPRILPKTAFDKKSFLGVVSPLIKLEIIKEGEGRICRNANKLNLANSI
Ga0248169_1393862	3300022602	Freshwater	MSTLFNQEPRILPKTAYNKVSFLDVVSPLVKIEIINEGKGRICRNAHKLNLANSIYEKIE
Ga0208619_1163491	3300025336	Freshwater	FWRIYMSTLFNNETPRILPKTAFDKKSFLEIVSPLVKLDIIKEGEGRKCRNAHKLDLTNSIYEKIDE
Ga0208502_10082463	3300025339	Freshwater	MSRLFDDRSPRILPKTSFNKSSFLDIVSPLVKIDIIKEGEGLTARNANKLNLENSIYEKLEDDD
Ga0208502_10084043	3300025339	Freshwater	MSTLFNNETPRILPKTAFDKKSFLEIVSPLVKLDIIKEGEGRKCRNAHKLDLTNSIYEKIDE
Ga0208737_10000245	3300025346	Freshwater	MSTLFNNESPRILPKAAFNKASFLDVVSPLVKMDIIKEGEGRRCRNAHKLDLTNSIYEKIED
Ga0208383_10172762	3300025357	Freshwater	MSTLFNNETPRILPKVSFQKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE
Ga0208504_100000125	3300025358	Freshwater	MSTLFNNETPRMLPKQAFNKASFLSVVSPLVKLEIIKEGEGLKCRNAHKLNLADSIYEKIED
Ga0208382_10013326	3300025369	Freshwater	MSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKESEGRICRNAHKLNLANSIYEKLED
Ga0208382_10129373	3300025369	Freshwater	MSTLFNNETPRILPKVALNKQSFLSVVSPLIKLDIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0208382_10167201	3300025369	Freshwater	MSTLFNNEPPRLLPKQAFNKRSFLNVVSPLVKLEIIKEGEGRICRNAHKLNLANSIYEKLED
Ga0207957_10106232	3300025372	Freshwater	MSNLFNDETPSILPKVSFNKNSFLDIVSPLVKIDIIKEGEGRKARNASKLNLSNSIYEKIDED
Ga0208738_10095682	3300025379	Freshwater	MSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKEGEGRICRNAHKLNLANSIYEKLED
Ga0208871_100005737	3300025381	Freshwater	MSTLFNNEPPRILPKKAFNKRSFLDIVSPLIKLDIIKEGEGLKCRNAQKLVLTNSIYEKISE
Ga0208871_10003332	3300025381	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYEKIDEA
Ga0208871_10007904	3300025381	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLEVVSPLVKLDIIKEGEGSKCRNAHKLDLRNSIYEKIDA
Ga0208871_10044252	3300025381	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGIKCRNAHKLDLSNSIYEKIDA
Ga0208871_10099061	3300025381	Freshwater	IMSTLFNNETPRILPKVALNKQSFLSVVSPLIKLDIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0208250_10009803	3300025383	Freshwater	MSTLFNNEIPRMLPKAAFNKQSFLEVVSPLIKLDIIKEGEGRKARNAHKLDLTNSIYEKIDE
Ga0207959_10281212	3300025387	Freshwater	MSTLFNRETPRILPKTSFNKESFLNVVSPLVKLEIIKEGEGFKCRNAHKLNLANSIYEKIED
Ga0208740_10296622	3300025391	Freshwater	MSTLFNKETPRMLPKTAFNKASFLDVVSPLVKLDIIKEGEGRRCRNAHKLDLSNSIYEKIEE
Ga0208740_10442771	3300025391	Freshwater	MSTLFNNETPRILPKVSFQKKSFLEIVSPLVKLDIIKEGEGRVCRNAQKLDLTNSI
Ga0208874_10422171	3300025396	Freshwater	LNALINRHTNFLGVFMSTLFNNETPRMLPKTAFNRVSFLDVVSPLVKMDIIKEGEGRICRNAHKLNLANSIYEKLED
Ga0208876_10024765	3300025402	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGRIARNAHKLDLRNSIYEKIED
Ga0208381_1000005118	3300025405	Freshwater	MNNPFNSPKPRILPKVGYAKTSFNIVSPLIKLDIIKEGEGRKCRNASKLDLSNSIYEKIENE
Ga0208381_100001729	3300025405	Freshwater	MSNPFSPDSTPRMLPKQAKVKTALTIVSPLVKLDIIKEGEGLTCRNANKLDLTDSIYEKIDED
Ga0208378_10669282	3300025407	Freshwater	MSTLFNNETPRMLPKQAFNKRSFLNIVSPIVKLEIIKEGEGRICRNAHKLNLSNSIYEKLED
Ga0208875_10111482	3300025410	Freshwater	MSRLFNDETPRILPKTSFNKKSFLEIVSPLTKIDIIKEGEGRKARNASKLDLSNSIYEKIDEE
Ga0208746_10192711	3300025423	Freshwater	MSTLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGIKCRNAHKLDLSNS
Ga0208746_10426972	3300025423	Freshwater	MSTLFNNEPPRLLPKQAFNKRSFLNVVSPLVKLEIIKEGEGRICRNAHKLNLANSIYEK
Ga0208500_10406002	3300025429	Freshwater	PNRKGWSMSQLFNNETPRILPKVSFNKQSFLDIVSPLVKMDIIKEGEGKIARNSHKLNLENSIYEKLEDED
Ga0208618_10005733	3300025435	Freshwater	MSTLFNNESPRMLPKVSYNKHSFLSAVSPLVKLDIIKEGEGKIARNASKLNLDDSIYEKIDED
Ga0208379_10653051	3300025598	Freshwater	MSTLFNNETPRMLPKAAFNKKSFLSIVSPLVKLEIIKEGEGLKTRNAHKLVLSDSIYEKIDED
Ga0208379_10844401	3300025598	Freshwater	MSRLFNDETPRILPKTSFNKKSFLEIVSPLTKIDIIKEGEGRKARNASKLDLSNSIYEKI
Ga0208379_11377931	3300025598	Freshwater	AELVSTLFNNETPRILPKVSFNRHSFLDTVSPLVKIDIIKEGEGKIARNAKKLDLSNSIYEKLEDED
Ga0208507_11647542	3300025648	Freshwater	TLFNNETPRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYEKIDE
Ga0208507_11956931	3300025648	Freshwater	PRLLPKAAFNKKSFLDVVSPLVKLDIIKEGEGIKCRNAHKLDLSNSIYEKIDA
Ga0208386_10008713	3300025781	Freshwater	MSTLFNKETHRMLPKTAFNKASFLDVVSPLVKLDIIKEGEGRRCRNAHKLDLSNSIYEKIEE
Ga0209085_12514782	3300027741	Freshwater Lake	MSQLFNDSNPNILPKVSFNKHSFLDIVSPLVKIDIIKEGEGKIARNAGKLDLSNSIYEKLDEDD
Ga0209084_10155444	3300027749	Freshwater Lake	MSTLFNDQSPRLLPRTAFNKQSFLNVVSPLIKLDIIKEGEGSKCRNAHKLNLTDSIYEKIDED
Ga0209084_10687332	3300027749	Freshwater Lake	MSRLFDDRSPSILPKVSFNKTSFLDIVSPLVKIDIIKEGEGVKARNAHKLNLENSIYEKIDEEF
Ga0209084_11355342	3300027749	Freshwater Lake	MSTLFNNETPRMLPKVALNKTSFLSIVSPLVKLDIIKEGEGRKCRNAHKLDLSNSIYEKIEED
Ga0209084_13424652	3300027749	Freshwater Lake	MSTLFNNETPRILPKFSFNKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE
Ga0209777_102536822	3300027896	Freshwater Lake Sediment	MSTLFNNQAPKILPKTAYNKVSFLSVVSPLIKLEIIKEGEGRICRNAHKLNLANSIYEKIED
Ga0316219_100075949	3300031759	Freshwater	MSTLFNNEAPRILPKSAFNKKSFLEIVSPLIKLDIIKEGEGLKCRNSHKLDLTNSIYEKIDEE
Ga0316220_12601281	3300031884	Freshwater	IFYSSENHMSTLFNNETPRILPKVSFQKKSFLDIVSPLVKLDIIKEGEGNTCRNAHKLDLTDSIYEKIDAE
Ga0316226_11779603	3300032562	Freshwater	TLFNQEPRILPKTAYNKVSFLDVVSPLVKIEIINEGKGRICRNAHKLNLANSIYEKIED
Ga0316228_11651481	3300032579	Freshwater	PKPRILPKVGYAKTSFNIVSPLIKLDIIKEGEGRKCRNASKLDLSNSIYEKIENE
Ga0316227_11189303	3300032677	Freshwater	LFNQEPRILPKTAYNKVSFLDVVSPLVKIEIINEGKGRICRNAHKLNLANSIYEKIED
Ga0316227_13000161	3300032677	Freshwater	PFNSPKPRILPKVGYAKTSFNIVSPLIKLDIIKEGEGRKCRNASKLDLSNSIYEKIENE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences