Basic Information | |
---|---|
Family ID | F067329 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 125 |
Average Sequence Length | 50 residues |
Representative Sequence | VLRAVIANVLGIANITDIADVADIVTDIADIATDIADIVNITDIAVEIGRRV |
Number of Associated Samples | 27 |
Number of Associated Scaffolds | 124 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 93.60 % |
% of genes near scaffold ends (potentially truncated) | 5.60 % |
% of genes from short scaffolds (< 2000 bps) | 48.80 % |
Associated GOLD sequencing projects | 26 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.49 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (64.800 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (66.400 % of family members) |
Environment Ontology (ENVO) | Unclassified (71.200 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (41.600 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.49 |
Powered by PDBe Molstar |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 124 Family Scaffolds |
---|---|---|
PF07727 | RVT_2 | 1.61 |
PF03152 | UFD1 | 0.81 |
PF06985 | HET | 0.81 |
PF09749 | HVSL | 0.81 |
PF01070 | FMN_dh | 0.81 |
PF00170 | bZIP_1 | 0.81 |
PF05970 | PIF1 | 0.81 |
PF00400 | WD40 | 0.81 |
PF07691 | PA14 | 0.81 |
PF00082 | Peptidase_S8 | 0.81 |
PF06140 | Ifi-6-16 | 0.81 |
PF13423 | UCH_1 | 0.81 |
PF02906 | Fe_hyd_lg_C | 0.81 |
PF05653 | Mg_trans_NIPA | 0.81 |
COG ID | Name | Functional Category | % Frequency in 124 Family Scaffolds |
---|---|---|---|
COG0069 | Glutamate synthase domain 2 | Amino acid transport and metabolism [E] | 0.81 |
COG0507 | ATPase/5’-3’ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V) | Replication, recombination and repair [L] | 0.81 |
COG1304 | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase | Energy production and conversion [C] | 0.81 |
COG4624 | Iron only hydrogenase large subunit, C-terminal domain | Energy production and conversion [C] | 0.81 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 64.80 % |
All Organisms | root | All Organisms | 35.20 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300002245|JGIcombinedJ26739_100330754 | Not Available | 1406 | Open in IMG/M |
3300005602|Ga0070762_11011302 | Not Available | 570 | Open in IMG/M |
3300009633|Ga0116129_1095589 | Not Available | 864 | Open in IMG/M |
3300012203|Ga0137399_11743809 | Not Available | 511 | Open in IMG/M |
3300012209|Ga0137379_11476471 | Not Available | 581 | Open in IMG/M |
3300012361|Ga0137360_11444543 | Not Available | 591 | Open in IMG/M |
3300012930|Ga0137407_12180662 | Not Available | 529 | Open in IMG/M |
3300019890|Ga0193728_1027650 | Not Available | 2826 | Open in IMG/M |
3300019890|Ga0193728_1035803 | Not Available | 2454 | Open in IMG/M |
3300019890|Ga0193728_1040811 | All Organisms → Viruses → Predicted Viral | 2282 | Open in IMG/M |
3300019890|Ga0193728_1051130 | All Organisms → Viruses → Predicted Viral | 2008 | Open in IMG/M |
3300019890|Ga0193728_1059460 | Not Available | 1841 | Open in IMG/M |
3300019890|Ga0193728_1093066 | Not Available | 1403 | Open in IMG/M |
3300019890|Ga0193728_1128180 | Not Available | 1141 | Open in IMG/M |
3300019890|Ga0193728_1210354 | Not Available | 809 | Open in IMG/M |
3300020061|Ga0193716_1007581 | Not Available | 5638 | Open in IMG/M |
3300021180|Ga0210396_11662629 | Not Available | 520 | Open in IMG/M |
3300021406|Ga0210386_11655437 | Not Available | 530 | Open in IMG/M |
3300021433|Ga0210391_11224822 | Not Available | 581 | Open in IMG/M |
3300027575|Ga0209525_1136868 | Not Available | 566 | Open in IMG/M |
3300027879|Ga0209169_10424281 | Not Available | 699 | Open in IMG/M |
3300027895|Ga0209624_10517790 | Not Available | 794 | Open in IMG/M |
3300027895|Ga0209624_10868347 | Not Available | 590 | Open in IMG/M |
3300027895|Ga0209624_11091238 | Not Available | 514 | Open in IMG/M |
3300027908|Ga0209006_10171021 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 1899 | Open in IMG/M |
3300027908|Ga0209006_10300689 | Not Available | 1369 | Open in IMG/M |
3300027908|Ga0209006_10363693 | Not Available | 1224 | Open in IMG/M |
3300027908|Ga0209006_10387943 | Not Available | 1178 | Open in IMG/M |
3300027908|Ga0209006_10867274 | Not Available | 727 | Open in IMG/M |
3300027908|Ga0209006_10982164 | Not Available | 673 | Open in IMG/M |
3300027908|Ga0209006_11222561 | Not Available | 586 | Open in IMG/M |
3300027908|Ga0209006_11262049 | Not Available | 573 | Open in IMG/M |
3300027908|Ga0209006_11306541 | Not Available | 560 | Open in IMG/M |
3300027908|Ga0209006_11513413 | Not Available | 507 | Open in IMG/M |
3300028047|Ga0209526_10551877 | Not Available | 744 | Open in IMG/M |
3300028794|Ga0307515_10001739 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 48490 | Open in IMG/M |
3300028794|Ga0307515_10001782 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 47977 | Open in IMG/M |
3300028794|Ga0307515_10001821 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 47550 | Open in IMG/M |
3300028794|Ga0307515_10002277 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes | 42026 | Open in IMG/M |
3300028794|Ga0307515_10002545 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes | 39378 | Open in IMG/M |
3300028794|Ga0307515_10004183 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetes incertae sedis → Coniosporium → Coniosporium apollinis → Coniosporium apollinis CBS 100218 | 30036 | Open in IMG/M |
3300028794|Ga0307515_10004404 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 29157 | Open in IMG/M |
3300028794|Ga0307515_10004628 | Not Available | 28264 | Open in IMG/M |
3300028794|Ga0307515_10004832 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 27568 | Open in IMG/M |
3300028794|Ga0307515_10006638 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Mytilinidiales | 23060 | Open in IMG/M |
3300028794|Ga0307515_10007805 | Not Available | 21054 | Open in IMG/M |
3300028794|Ga0307515_10007894 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 20908 | Open in IMG/M |
3300028794|Ga0307515_10007936 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 20848 | Open in IMG/M |
3300028794|Ga0307515_10009939 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 18315 | Open in IMG/M |
3300028794|Ga0307515_10010602 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Aulographales → Aulographaceae → Aulographum → Aulographum hederae → Aulographum hederae CBS 113979 | 17640 | Open in IMG/M |
3300028794|Ga0307515_10011048 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi | 17195 | Open in IMG/M |
3300028794|Ga0307515_10011418 | Not Available | 16858 | Open in IMG/M |
3300028794|Ga0307515_10011614 | Not Available | 16695 | Open in IMG/M |
3300028794|Ga0307515_10012239 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 16159 | Open in IMG/M |
3300028794|Ga0307515_10013681 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 15121 | Open in IMG/M |
3300028794|Ga0307515_10016180 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 13678 | Open in IMG/M |
3300028794|Ga0307515_10017117 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi | 13231 | Open in IMG/M |
3300028794|Ga0307515_10017724 | Not Available | 12946 | Open in IMG/M |
3300028794|Ga0307515_10019401 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 12246 | Open in IMG/M |
3300028794|Ga0307515_10020069 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetes incertae sedis → Zopfiaceae → Zopfia → Zopfia rhizophila → Zopfia rhizophila CBS 207.26 | 11963 | Open in IMG/M |
3300028794|Ga0307515_10020500 | Not Available | 11790 | Open in IMG/M |
3300028794|Ga0307515_10022763 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 11026 | Open in IMG/M |
3300028794|Ga0307515_10022763 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 11026 | Open in IMG/M |
3300028794|Ga0307515_10024449 | Not Available | 10526 | Open in IMG/M |
3300028794|Ga0307515_10024678 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 10456 | Open in IMG/M |
3300028794|Ga0307515_10026568 | Not Available | 9953 | Open in IMG/M |
3300028794|Ga0307515_10028810 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 9420 | Open in IMG/M |
3300028794|Ga0307515_10038431 | Not Available | 7656 | Open in IMG/M |
3300028794|Ga0307515_10044886 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Lecanoromycetes → OSLEUM clade → Umbilicariomycetidae → Umbilicariales → Umbilicariaceae → Lasallia → Lasallia pustulata | 6810 | Open in IMG/M |
3300028794|Ga0307515_10045912 | Not Available | 6694 | Open in IMG/M |
3300028794|Ga0307515_10047171 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes | 6559 | Open in IMG/M |
3300028794|Ga0307515_10054310 | Not Available | 5885 | Open in IMG/M |
3300028794|Ga0307515_10055761 | Not Available | 5764 | Open in IMG/M |
3300028794|Ga0307515_10060335 | Not Available | 5412 | Open in IMG/M |
3300028794|Ga0307515_10064125 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Sclerotiniaceae → Sclerotinia → Sclerotinia borealis → Sclerotinia borealis F-4128 | 5141 | Open in IMG/M |
3300028794|Ga0307515_10082005 | All Organisms → Viruses → Predicted Viral | 4179 | Open in IMG/M |
3300028794|Ga0307515_10090452 | Not Available | 3838 | Open in IMG/M |
3300028794|Ga0307515_10098773 | All Organisms → Viruses → Predicted Viral | 3552 | Open in IMG/M |
3300028794|Ga0307515_10104560 | Not Available | 3381 | Open in IMG/M |
3300028794|Ga0307515_10125268 | Not Available | 2876 | Open in IMG/M |
3300028794|Ga0307515_10148175 | All Organisms → Viruses → Predicted Viral | 2471 | Open in IMG/M |
3300028794|Ga0307515_10226029 | Not Available | 1676 | Open in IMG/M |
3300028794|Ga0307515_10842210 | Not Available | 543 | Open in IMG/M |
3300030522|Ga0307512_10222971 | Not Available | 982 | Open in IMG/M |
3300030934|Ga0075391_11453861 | Not Available | 661 | Open in IMG/M |
3300030937|Ga0138302_1072980 | Not Available | 512 | Open in IMG/M |
3300031057|Ga0170834_101296519 | Not Available | 618 | Open in IMG/M |
3300031122|Ga0170822_16331209 | Not Available | 501 | Open in IMG/M |
3300031128|Ga0170823_11834288 | Not Available | 619 | Open in IMG/M |
3300031474|Ga0170818_115620990 | Not Available | 596 | Open in IMG/M |
3300031708|Ga0310686_118730957 | Not Available | 657 | Open in IMG/M |
3300033179|Ga0307507_10000059 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 164159 | Open in IMG/M |
3300033179|Ga0307507_10000072 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 158056 | Open in IMG/M |
3300033179|Ga0307507_10000303 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 99134 | Open in IMG/M |
3300033179|Ga0307507_10000461 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 85160 | Open in IMG/M |
3300033179|Ga0307507_10001966 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 44596 | Open in IMG/M |
3300033179|Ga0307507_10002498 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 38399 | Open in IMG/M |
3300033179|Ga0307507_10003234 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina | 32087 | Open in IMG/M |
3300033179|Ga0307507_10003998 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 27071 | Open in IMG/M |
3300033179|Ga0307507_10007377 | All Organisms → cellular organisms → Eukaryota → Opisthokonta | 16051 | Open in IMG/M |
3300033179|Ga0307507_10007883 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya | 15083 | Open in IMG/M |
3300033179|Ga0307507_10007921 | Not Available | 15029 | Open in IMG/M |
3300033179|Ga0307507_10022155 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Eurotiomycetidae → Eurotiales → Elaphomycetaceae → Elaphomyces → Elaphomyces granulatus | 7036 | Open in IMG/M |
3300033179|Ga0307507_10053761 | Not Available | 3842 | Open in IMG/M |
3300033179|Ga0307507_10270526 | Not Available | 1074 | Open in IMG/M |
3300033179|Ga0307507_10274162 | Not Available | 1062 | Open in IMG/M |
3300033179|Ga0307507_10317872 | Not Available | 940 | Open in IMG/M |
3300033179|Ga0307507_10393819 | Not Available | 791 | Open in IMG/M |
3300033179|Ga0307507_10401014 | Not Available | 780 | Open in IMG/M |
3300033179|Ga0307507_10410479 | Not Available | 765 | Open in IMG/M |
3300033179|Ga0307507_10420974 | Not Available | 750 | Open in IMG/M |
3300033179|Ga0307507_10436325 | Not Available | 729 | Open in IMG/M |
3300033179|Ga0307507_10484988 | Not Available | 671 | Open in IMG/M |
3300033179|Ga0307507_10486879 | Not Available | 669 | Open in IMG/M |
3300033179|Ga0307507_10505395 | Not Available | 650 | Open in IMG/M |
3300033179|Ga0307507_10515912 | Not Available | 639 | Open in IMG/M |
3300033179|Ga0307507_10522613 | Not Available | 633 | Open in IMG/M |
3300033179|Ga0307507_10559905 | Not Available | 600 | Open in IMG/M |
3300033179|Ga0307507_10563925 | Not Available | 597 | Open in IMG/M |
3300033179|Ga0307507_10575448 | Not Available | 588 | Open in IMG/M |
3300033179|Ga0307507_10582768 | Not Available | 582 | Open in IMG/M |
3300033179|Ga0307507_10590509 | Not Available | 576 | Open in IMG/M |
3300033179|Ga0307507_10626796 | Not Available | 550 | Open in IMG/M |
3300033179|Ga0307507_10632152 | Not Available | 547 | Open in IMG/M |
3300033179|Ga0307507_10669726 | Not Available | 523 | Open in IMG/M |
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 66.40% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 12.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 8.00% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.00% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.20% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.20% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 1.60% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 0.80% |
Visualization |
---|
Powered by ApexCharts |
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300009633 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
3300020061 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1 | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300027575 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
3300027895 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Host-Associated | Open in IMG/M |
3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Host-Associated | Open in IMG/M |
3300030934 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300030937 | Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031122 | Oak Spring Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Host-Associated | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGIcombinedJ26739_1003307542 | 3300002245 | Forest Soil | VLRAVIADXXGIANIVTDITDIAIDIADVATDIADIVNIXDIAVETGRRV* |
Ga0070762_110113021 | 3300005602 | Soil | KYIGQQVLRAVIADVSGIANIVTDITDIANIADIAVETGRCV* |
Ga0116129_10955891 | 3300009633 | Peatland | MLRAGITDVSGIANIADIVDVADIATGIADTGTDIGTDIADIGTDVADIADRML* |
Ga0137399_117438091 | 3300012203 | Vadose Zone Soil | VLRVVIADVLGIANITDIADVADIITDIADIAIDITDIATD |
Ga0137379_114764712 | 3300012209 | Vadose Zone Soil | VLRAVIADVSGIVNITDISDVADIITDIADIAMDIADIVNIADIAVETGRRVQSVTKVSRDRA* |
Ga0137360_114445432 | 3300012361 | Vadose Zone Soil | VLRAVIADVSGIANITDIADVADIITDIADIATDIADIADIVNIADIAVETGRRVQSVTEVSRDKA* |
Ga0137407_121806621 | 3300012930 | Vadose Zone Soil | VLRAVIANVLGIANITDIADVADIVTDIADIADIVNIADIVVEIGSCV* |
Ga0193728_10276501 | 3300019890 | Soil | VLRAVIVDILGIANITDIADIADIVTDIADIINIVDIEGVTRLSRNGA |
Ga0193728_10358033 | 3300019890 | Soil | VLRVVITDILGIINITDIIDVADIVIDITDIVVETGRRV |
Ga0193728_10408111 | 3300019890 | Soil | VLRAVIADVLGIANITDIADIADIVTDIADIVNITDIKGVTRLSRNGA |
Ga0193728_10511301 | 3300019890 | Soil | VLRAGIINILGIINITDIIDVADIITDIIDIAIDIADIADIVNKGVIGVSRNRA |
Ga0193728_10594601 | 3300019890 | Soil | VLRAVIADVSGIANITDIVDVADIVTDITDIAVEIGRRV |
Ga0193728_10930662 | 3300019890 | Soil | VLRAVIADVLGIANITDIADVADIVTDIMDIVVETGRRV |
Ga0193728_11281803 | 3300019890 | Soil | VLRVVIANVLGIANITDIVDVADIVTDIADIAMDIADIVVEIGRRV |
Ga0193728_12103541 | 3300019890 | Soil | VLRAVIVDVLGIANITDIADIADIVTDIADIVNIADIEGVTRLSRNGV |
Ga0193716_10075811 | 3300020061 | Soil | VLRAVIANVLGIANITDIADIADIVTDIADIATDITNIVVETGRRV |
Ga0210396_116626291 | 3300021180 | Soil | VLKVGIADISGIANIANIADIADIATGIADIVTDIADIVTDIAGIANQVLR |
Ga0210386_116554371 | 3300021406 | Soil | VLGAGIADVSGIANIADIAGVADIVTDIADIVTDIADIVTDIASIADRVL |
Ga0210391_112248221 | 3300021433 | Soil | IADISGIANIITDITDIAIDIADVATDIADIATDIVDIVNIADIAVETGRRVKGVTEVSCNGA |
Ga0209525_11368681 | 3300027575 | Forest Soil | VLRAVIADILGIANIITDITDIAIDIADVATDIADIVNIVDIAVETGRRV |
Ga0209169_104242811 | 3300027879 | Soil | VLRAGIADVSGIANIADIADVADIGMDIADISIDIADIVNSTDITDRMLRTLR |
Ga0209624_105177902 | 3300027895 | Forest Soil | VLRAVIADVLGIANIITDITDIAIDIADVATDIADIATDIADIVNIADIAVETGRRV |
Ga0209624_108683471 | 3300027895 | Forest Soil | VPGVVIADVLGIANIADVADIVTDIADIATDIADITTDIADIAVETGRRV |
Ga0209624_110912381 | 3300027895 | Forest Soil | VLRAVIADILGIANIVTDITDIAIDIADVATDIADIATDIAVETGRRV |
Ga0209006_101710212 | 3300027908 | Forest Soil | VLRAVIADVSGIANIVTDITDIATDIADIVNIADIAVETGRCI |
Ga0209006_103006891 | 3300027908 | Forest Soil | VLRVGITDVLGIANITDIADIADIVTDIADIATDIADIADRIL |
Ga0209006_103636931 | 3300027908 | Forest Soil | VPGVVIADVLGIANIVNVADIITDIADIATDIADIAIDIANIVVETGRRV |
Ga0209006_103879431 | 3300027908 | Forest Soil | VLRVVIADVLGIANIADVADIVTDIADIATDIADIATDIADIAVETGRRV |
Ga0209006_108672741 | 3300027908 | Forest Soil | VLGAVIADVLGIANIMDIADVADIVTDIADIAMDIADIADIVNI |
Ga0209006_109821641 | 3300027908 | Forest Soil | VLRAVIMDVLGIANIMDIADVTDIADIAMDIADIATDIADIADIVNIRILR |
Ga0209006_112225611 | 3300027908 | Forest Soil | VLRAGIADVLGITNITDIAEIADIITDIADIATDITDIAVEIGRRV |
Ga0209006_112620491 | 3300027908 | Forest Soil | VLRAVIADVLGIANITDIADVVDIVNIADIMVETGRRV |
Ga0209006_113065411 | 3300027908 | Forest Soil | VLGAVIADVLGIANITDITDVADIVTDIMDIATDIADIADIVNI |
Ga0209006_115134131 | 3300027908 | Forest Soil | VLRVVIADVLGIANIVTDITDIAIDIADVATDIADIATDIADIVNIADIAVEIGRRV |
Ga0209526_105518771 | 3300028047 | Forest Soil | VLRAVIADILGIVNIVTDITDIAIDIADVATDIADIATDIADIMNIADIAVETGRRV |
Ga0307515_100017396 | 3300028794 | Ectomycorrhiza | VLRAVIANILGIANITDIADIADIVTDIADITDIVNIADIIVETGRRV |
Ga0307515_100017821 | 3300028794 | Ectomycorrhiza | VLRAVIANVSGIANITDITDVVDIITDIADIADIVNIWILRWR |
Ga0307515_100018217 | 3300028794 | Ectomycorrhiza | VLRVVIANVLGIANIIDIVDIATDIANIAMDITDIADIINIRILR |
Ga0307515_1000227733 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGITNITDIVDVADIVTDIIDIATDIADIIVEISRRV |
Ga0307515_100025451 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVTDIADIINIADIAVEIGRCV |
Ga0307515_1000418316 | 3300028794 | Ectomycorrhiza | VLRAVIADISGIANITDIADVADIITDIADIADIVNIADIAVEMGRRVQGVTGVSIGENR |
Ga0307515_100044043 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGITNITDIIDVADIITDIADIADIVNIADIAVEIGRRV |
Ga0307515_100046285 | 3300028794 | Ectomycorrhiza | VLRVVIANVLGIANITDIADVADIVTDIADIADIADIVNIRILWETGRRV |
Ga0307515_100048327 | 3300028794 | Ectomycorrhiza | VLGAGIADVLGIANIANIADVTDIITDIADIATDITDIATNIAVEIGRRVQGVTGVSYNK |
Ga0307515_100066383 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVMDITDIATDIADIVNIADIVVETGRRV |
Ga0307515_100078054 | 3300028794 | Ectomycorrhiza | VLRVVIANILGIANITDIADVADIVTDIMDIAMDIADIVNIVNIAVEIGRRV |
Ga0307515_100078944 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIADVADIVTDIADITTDIADIATDIAVEIGRRVQGVTEVSRNR |
Ga0307515_100079362 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIVDVADIATDIADIVNIADIVVETGRRV |
Ga0307515_100099392 | 3300028794 | Ectomycorrhiza | VLRAVIADVSGIANITDIADVADIVTDIADIATDIADIAVETGRRVQGVTEVSRDRA |
Ga0307515_100106028 | 3300028794 | Ectomycorrhiza | VLRAVIANILGIANITDIADIATDIANIATNIADIADIVNIRILRWR |
Ga0307515_100110483 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVTDIADIATDIADIAVETGRRVQGVTEVSRNRA |
Ga0307515_100114183 | 3300028794 | Ectomycorrhiza | VLRAVIADILGIANITDIADVADIVTDIADITDIVVETGRRV |
Ga0307515_100116145 | 3300028794 | Ectomycorrhiza | VLGAVIADVSGIANITDIADVADIATDIADIVNIADIAVETGRRV |
Ga0307515_100122392 | 3300028794 | Ectomycorrhiza | VLRAVIVDVLGIINITDIADIVTDIADIVNITDIAVETGRRV |
Ga0307515_100136816 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVTDIADIADIVNIADIAVEIGRRV |
Ga0307515_100161805 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIADVADIVTDIADIATDIADIVNITDIAVEIGRRV |
Ga0307515_100171174 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVTDITDIADIVNIADIAVEIGRRV |
Ga0307515_100177242 | 3300028794 | Ectomycorrhiza | VLRAVITNVLGIANIIDITDVADIVTDIVDIATDIADIAVETGRRV |
Ga0307515_100194013 | 3300028794 | Ectomycorrhiza | VLRAVIANILGITNITDIADVADIVTDITDIAINIADIADIVNI |
Ga0307515_100200692 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIVDVANIVTDIADITTDIADIATDIADIADIINIRILREIGRRVQGVTKVFHNRA |
Ga0307515_100205003 | 3300028794 | Ectomycorrhiza | VLRAVIADILGIANITDIAGVADIVIDIADITDIVNIVDIVVETGRRVQGVTGVSIGENR |
Ga0307515_100227634 | 3300028794 | Ectomycorrhiza | VLKAVIADILGIANIIDIADVADIVIDITNIATDITDIVNIIDIIVEIGRRV |
Ga0307515_100227636 | 3300028794 | Ectomycorrhiza | VLRVVIADILGITNITDITDVADIVTDIMDIATDIADIVNIIDIAVEIGRYV |
Ga0307515_100244491 | 3300028794 | Ectomycorrhiza | VLRVVITDISGIANIMDITDVTDIVTDIADITDIINIADIAVEIGRRI |
Ga0307515_100246783 | 3300028794 | Ectomycorrhiza | VLRVVIADVLGIVNITDITDVADIVTDIADIVNIADIAVEIGRRVQGITKVSIGENRWKG |
Ga0307515_100265681 | 3300028794 | Ectomycorrhiza | VLGAVIADVLGIANITDIADVADIVTDIADIAADIAVETGRRV |
Ga0307515_100288104 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIVDIVDIITDIADIATDITNIAIDITDIADIINIRIL |
Ga0307515_100384312 | 3300028794 | Ectomycorrhiza | VLRAVIADVLGIANITDIADVADIVTDIADIATDIADIVNIRILRWR |
Ga0307515_100448862 | 3300028794 | Ectomycorrhiza | VLRAVITNVLDIANITDIADVADIVTDIADITTDITDIIDIVNI |
Ga0307515_100459121 | 3300028794 | Ectomycorrhiza | VLRVVITDILGIANITDIIDVADIVIDIADITDIVNIADIAVEMGRRV |
Ga0307515_100471713 | 3300028794 | Ectomycorrhiza | VLRAVIADVLSIANITDIVDVADIVTDIINIADIMVETGKRV |
Ga0307515_100543102 | 3300028794 | Ectomycorrhiza | VLRAVIVNVLGIANITDITDVADIVTDIADIAMDIIDIADIVNIVDIAVETGRRV |
Ga0307515_100557613 | 3300028794 | Ectomycorrhiza | VLRAVIVNISGIANITDITDVTDIVTDIADITDIVNIADIMVETGRRV |
Ga0307515_100603351 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANIMDIIDVADIVTDIADIVTDIADIADIVNIADITVETGRRV |
Ga0307515_100641252 | 3300028794 | Ectomycorrhiza | VLRAVIANVSGIANITDIADVADIVTDIADIATDIADIAVETGRRVQGVTKVSHDRA |
Ga0307515_100820051 | 3300028794 | Ectomycorrhiza | VLRVVIADILGIANITDIADVVDIIIDITDITDIINIADIIVEIGRRV |
Ga0307515_100904521 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIADVADIATDIADIATDIADIADIVNIWILWETGRRV |
Ga0307515_100987732 | 3300028794 | Ectomycorrhiza | VLRVVIIDVLGIVNITDIADVADIVTDITDIATDIMDIVNIANITVETGRRV |
Ga0307515_101045601 | 3300028794 | Ectomycorrhiza | VLRAVIANVLGIANITDIADIATDIANIAIDIADIADIVNIRILR |
Ga0307515_101252681 | 3300028794 | Ectomycorrhiza | VLGVVIADVLGIANTMDIVDVADIVTDITDIATDIAVEIGRRAKSYPLSLK |
Ga0307515_101481751 | 3300028794 | Ectomycorrhiza | VLRVVIANVLGIANIMDIVDVADIATDIADIAIDIADIADIINI |
Ga0307515_102260291 | 3300028794 | Ectomycorrhiza | VLGAVIADVSGIANITDIADVADIVTDIADIADIVNIADIAVETGRRVQGVTEVSHNRA |
Ga0307515_108422101 | 3300028794 | Ectomycorrhiza | VLRVVIADVLGIVNITNIADVADIVTDIADIADIMNIADIAVETGRRV |
Ga0307512_102229711 | 3300030522 | Ectomycorrhiza | VLRVVIADVLGIANITDIADVADIVTDITDIATDIADIVNIADIAVETGRRI |
Ga0075391_114538611 | 3300030934 | Soil | VDVLGIANITDIADVADIVTDITDIAADIADIVNIADIAVETGRRV |
Ga0138302_10729801 | 3300030937 | Soil | VLRVGIADVLGIVGVADIITDIADIAADIAVEIGRRVQGVTKVSIGENK |
Ga0170834_1012965192 | 3300031057 | Forest Soil | VLGAVIADVSGIANIMDIADVADIVTDITDIAADIADIAVETGRRV |
Ga0170822_163312092 | 3300031122 | Forest Soil | VLGAVIADVSGIANITDIADVADIVTDITDIAADIADIADIVNIAEGVVVVSKYL |
Ga0170823_118342881 | 3300031128 | Forest Soil | VLGAVIADVSGIANITDIVDVADIVTDITDIAADIADIAVETGRRV |
Ga0170818_1156209902 | 3300031474 | Forest Soil | VLGAVIADVSGIANITDIADVADIVTDITDIAADIADIADIVNIAEGVVGVSKYL |
Ga0310686_1187309571 | 3300031708 | Soil | VLGAVIADVLGIANITDIADVADIVADIADIADIATDIADIAVETGRRVQGVTKVSRNRA |
Ga0307507_100000595 | 3300033179 | Ectomycorrhiza | VLGAGIADVSGIANITDIADVADIVTDIADIADIVNIADIAVEIGKCV |
Ga0307507_1000007218 | 3300033179 | Ectomycorrhiza | VLRAGIADVSGIANITDIADVADIVTDIADIADIVNIADIAVETGKCV |
Ga0307507_1000030311 | 3300033179 | Ectomycorrhiza | VLGAGIADILGIANITDITDVADIVTDIADITDIINITDIAVEIGKCV |
Ga0307507_100004617 | 3300033179 | Ectomycorrhiza | LGIANIADIADVADIVTDIADIATDITDITVETGRRVQGVTKVSHNRV |
Ga0307507_100019662 | 3300033179 | Ectomycorrhiza | LGIANITDIADIAADIADIADIINIADIVVETGRRV |
Ga0307507_1000249819 | 3300033179 | Ectomycorrhiza | VLGAGIADVLGIANITDITDVADIVTDIADIADIVNITDIAVETGKCVQGITGVSCDKA |
Ga0307507_100032349 | 3300033179 | Ectomycorrhiza | VLRAGIADISGIANITDIADVADIVTDIADIADIINIADIVVETGKCV |
Ga0307507_1000399817 | 3300033179 | Ectomycorrhiza | VLGAGIADVSGIANITDIADIADIVTDIADIAIDVADIADPILRIL |
Ga0307507_100073772 | 3300033179 | Ectomycorrhiza | VLGAGIADVLGIANITDIIDVADIVMDIADIADIVNIADIAVETGKCV |
Ga0307507_100078837 | 3300033179 | Ectomycorrhiza | VLRAVIVNVLGIANITDIADVADIVMDIADIATDIVNIADIVNIWILRWR |
Ga0307507_1000792110 | 3300033179 | Ectomycorrhiza | VDISGIANIADIADVADIVTDIADIATDIADIAVETGRRV |
Ga0307507_100221555 | 3300033179 | Ectomycorrhiza | VLRAGIADVLGIANITDIADVADIVTDIADIADIVNIADIAVETGKCV |
Ga0307507_100537612 | 3300033179 | Ectomycorrhiza | VLRAGITDVLGIANITDITDVADIVTDIADIADIINIADIAVEIGKCV |
Ga0307507_102705263 | 3300033179 | Ectomycorrhiza | VLGAVIIDVSGIVNITDIADVADIITDITDITMDIADIMNIADIAVETGRRV |
Ga0307507_102741621 | 3300033179 | Ectomycorrhiza | VLGAVIADVLGITNIMDIADIADIVTDIVDIATDIADIINIADIVVETGRHV |
Ga0307507_103178722 | 3300033179 | Ectomycorrhiza | VLRAVIVDVLGIANITDIADVADNITDIADIMNIADIAVETGRHV |
Ga0307507_103938191 | 3300033179 | Ectomycorrhiza | VLKAVIANVSGIANITDIVDVADIVTDIADIATDIADIVDIVNIADIMVEIGRRVQGVTGVSIGENR |
Ga0307507_104010141 | 3300033179 | Ectomycorrhiza | VLGAGIADVSGIANIADIADVADIVTDIMDITTDIADIMNIADIAVETGRRV |
Ga0307507_104104792 | 3300033179 | Ectomycorrhiza | VLGAVIADVSGIVNITDIADVVDIITDITDITIDIADIVNIADIAVETGRRV |
Ga0307507_104209741 | 3300033179 | Ectomycorrhiza | VHRAGTADVLDTADIAVVADIVTDITDIADIMDIADIVDI |
Ga0307507_104363251 | 3300033179 | Ectomycorrhiza | VLRAVIANVLGIANITDIADVADIVTDIADIATDIADIVDIVNIADIAVETGRRVQGVTGVSVGENR |
Ga0307507_104849881 | 3300033179 | Ectomycorrhiza | VLRAVIADVSGIANITDIADVADIAADIADIAVETGGRVQGVTKVSRNRA |
Ga0307507_104868791 | 3300033179 | Ectomycorrhiza | VLRAVIADVSGIANIADIAGVADIITDIADIVNITDIMVETGRRV |
Ga0307507_105053951 | 3300033179 | Ectomycorrhiza | VDILGIANIADITDVADIVTDITDIAIDIADIAVETGRRV |
Ga0307507_105159121 | 3300033179 | Ectomycorrhiza | VLRAVIADVSDIASITDIADVADIVTDIADIVNIADAAVETGRRVQGVTRVSIGENRWKG |
Ga0307507_105226131 | 3300033179 | Ectomycorrhiza | VLGAVITDVSGTANITDIADVADIVTDIVDIMDIVDIAVETGRRVQGVTEVSYNRA |
Ga0307507_105599051 | 3300033179 | Ectomycorrhiza | VLRAVITDISGIVNITDIADVADIVTDIVDIAIDIADIAIDIADIAVETGRRVQGVTEVSHNRV |
Ga0307507_105639252 | 3300033179 | Ectomycorrhiza | VIADVLGIANITDIADVADIVTDITNIAMDIADIVNIADIAVETGRRVQSVTEVSHNRA |
Ga0307507_105754482 | 3300033179 | Ectomycorrhiza | VLGAGIADVSGIANIADIADVADIVTDVADIAVETGRRVQGVTRVSIGEK |
Ga0307507_105827681 | 3300033179 | Ectomycorrhiza | VLRAVIVDVLGIVNIMDIADVADIVTDIADIMNIVDIAVETGRRV |
Ga0307507_105905091 | 3300033179 | Ectomycorrhiza | MLRTVIVDVSGIVNIINIADIVDIIMDIADIADIMNIVDIAVETGRRVQGVTKMSHDKA |
Ga0307507_106267961 | 3300033179 | Ectomycorrhiza | VLRAVITDVSGIANITDIADVADIVTDITDIATDIADIMNIADIAVETGRRV |
Ga0307507_106321522 | 3300033179 | Ectomycorrhiza | VLGAVITDVLGITNITDIADIADITTDIADIMNIADI |
Ga0307507_106697262 | 3300033179 | Ectomycorrhiza | VLGAVIADVLGIANITDIADIVDIVTDITDIAIDIADIVNIVDIAVEIGRYV |
⦗Top⦘ |