NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F067242

Metagenome Family F067242

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067242
Family Type Metagenome
Number of Sequences 126
Average Sequence Length 52 residues
Representative Sequence MKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY
Number of Associated Samples 56
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 36.51 %
% of genes near scaffold ends (potentially truncated) 45.24 %
% of genes from short scaffolds (< 2000 bps) 69.84 %
Associated GOLD sequencing projects 44
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (78.571 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean
(53.175 % of family members)
Environment Ontology (ENVO) Unclassified
(96.032 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(72.222 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.75%    β-sheet: 0.00%    Coil/Unstructured: 56.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.2.2.1: Ribosomal protein L29 (L29p)d1vq8v11vq80.69432
f.19.1.0: automated matchesd3d9sa13d9s0.69131
a.272.1.1: YqgQ-liked2nn4a12nn40.68823
a.1.1.3: Phycocyanin-like phycobilisome proteinsd3l0fa_3l0f0.6842
a.127.1.1: L-aspartase/fumarased7miwa17miw0.68394


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF00145DNA_methylase 1.59
PF13113DUF3970 0.79
PF05869Dam 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 1.59


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.57 %
All OrganismsrootAll Organisms21.43 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001392|Lau_10005128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium2685Open in IMG/M
3300001392|Lau_10010545All Organisms → Viruses → Predicted Viral2858Open in IMG/M
3300001392|Lau_10012769Not Available4822Open in IMG/M
3300001392|Lau_10014961Not Available3128Open in IMG/M
3300001392|Lau_10016658Not Available4184Open in IMG/M
3300001392|Lau_10033947Not Available2083Open in IMG/M
3300001392|Lau_10053362Not Available3999Open in IMG/M
3300001392|Lau_10055792Not Available2956Open in IMG/M
3300001392|Lau_10103660Not Available1563Open in IMG/M
3300001522|Mariner_1203314Not Available513Open in IMG/M
3300001679|TahiMoana_1017470Not Available2706Open in IMG/M
3300001680|KiloMoana_10012516Not Available4362Open in IMG/M
3300001681|Abe_10026444Not Available3298Open in IMG/M
3300001681|Abe_10058693Not Available2138Open in IMG/M
3300006736|Ga0098033_1006481All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium3955Open in IMG/M
3300007504|Ga0104999_1018774Not Available4184Open in IMG/M
3300007512|Ga0105016_1039363Not Available3641Open in IMG/M
3300007765|Ga0105010_1016919Not Available3626Open in IMG/M
3300008051|Ga0098062_1050070Not Available607Open in IMG/M
3300008216|Ga0114898_1007107All Organisms → Viruses → Predicted Viral4694Open in IMG/M
3300008216|Ga0114898_1076526Not Available1027Open in IMG/M
3300008216|Ga0114898_1126633Not Available747Open in IMG/M
3300008216|Ga0114898_1138466Not Available706Open in IMG/M
3300008216|Ga0114898_1151791Not Available667Open in IMG/M
3300008217|Ga0114899_1100517All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium975Open in IMG/M
3300008217|Ga0114899_1101469Not Available969Open in IMG/M
3300008217|Ga0114899_1114461Not Available899Open in IMG/M
3300008217|Ga0114899_1153020Not Available750Open in IMG/M
3300008217|Ga0114899_1214105Not Available606Open in IMG/M
3300008217|Ga0114899_1248332Not Available549Open in IMG/M
3300008218|Ga0114904_1050513Not Available1089Open in IMG/M
3300008220|Ga0114910_1011770Not Available3243Open in IMG/M
3300008220|Ga0114910_1033974Not Available1703Open in IMG/M
3300008220|Ga0114910_1062339Not Available1169Open in IMG/M
3300008220|Ga0114910_1104901All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon838Open in IMG/M
3300008220|Ga0114910_1111089All Organisms → Viruses → unclassified viruses → Circular genetic element sp.809Open in IMG/M
3300008220|Ga0114910_1117970Not Available778Open in IMG/M
3300008220|Ga0114910_1125176Not Available748Open in IMG/M
3300009030|Ga0114950_11394830Not Available543Open in IMG/M
3300009173|Ga0114996_10040972All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon4293Open in IMG/M
3300009173|Ga0114996_10143804All Organisms → Viruses → Predicted Viral1972Open in IMG/M
3300009409|Ga0114993_10644231Not Available776Open in IMG/M
3300009412|Ga0114903_1115908Not Available590Open in IMG/M
3300009413|Ga0114902_1090783Not Available824Open in IMG/M
3300009413|Ga0114902_1098506Not Available781Open in IMG/M
3300009413|Ga0114902_1187673Not Available506Open in IMG/M
3300009414|Ga0114909_1015382All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2605Open in IMG/M
3300009414|Ga0114909_1021150All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium2128Open in IMG/M
3300009414|Ga0114909_1052259Not Available1206Open in IMG/M
3300009414|Ga0114909_1054492Not Available1174Open in IMG/M
3300009414|Ga0114909_1072051All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon982Open in IMG/M
3300009418|Ga0114908_1010122All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium3938Open in IMG/M
3300009418|Ga0114908_1148822Not Available753Open in IMG/M
3300009418|Ga0114908_1170669Not Available688Open in IMG/M
3300009418|Ga0114908_1266331Not Available514Open in IMG/M
3300009602|Ga0114900_1057236Not Available1173Open in IMG/M
3300009602|Ga0114900_1063132Not Available1096Open in IMG/M
3300009602|Ga0114900_1165979Not Available561Open in IMG/M
3300009603|Ga0114911_1057631All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1192Open in IMG/M
3300009603|Ga0114911_1064548Not Available1112Open in IMG/M
3300009603|Ga0114911_1094703Not Available876Open in IMG/M
3300009603|Ga0114911_1135174Not Available699Open in IMG/M
3300009605|Ga0114906_1061869Not Available1403Open in IMG/M
3300009605|Ga0114906_1089400Not Available1119Open in IMG/M
3300009605|Ga0114906_1268056Not Available551Open in IMG/M
3300009620|Ga0114912_1019330Not Available1947Open in IMG/M
3300009620|Ga0114912_1047494Not Available1103Open in IMG/M
3300009706|Ga0115002_11206858Not Available512Open in IMG/M
3300009786|Ga0114999_11294351Not Available517Open in IMG/M
3300010883|Ga0133547_11186748All Organisms → Viruses → unclassified viruses → Circular genetic element sp.1459Open in IMG/M
3300017731|Ga0181416_1071833Not Available819Open in IMG/M
3300017757|Ga0181420_1203491Not Available574Open in IMG/M
3300017775|Ga0181432_1001136Not Available5707Open in IMG/M
3300017775|Ga0181432_1002236Not Available4278Open in IMG/M
3300017775|Ga0181432_1006239Not Available2781Open in IMG/M
3300017775|Ga0181432_1121479Not Available789Open in IMG/M
3300017775|Ga0181432_1222184Not Available594Open in IMG/M
3300017786|Ga0181424_10171701Not Available925Open in IMG/M
3300020460|Ga0211486_10494185All Organisms → Viruses → unclassified viruses → Circular genetic element sp.521Open in IMG/M
(restricted) 3300024259|Ga0233437_1091465All Organisms → Viruses → Predicted Viral1557Open in IMG/M
3300024344|Ga0209992_10014600Not Available4563Open in IMG/M
(restricted) 3300024517|Ga0255049_10133812Not Available1128Open in IMG/M
(restricted) 3300024517|Ga0255049_10542787Not Available541Open in IMG/M
(restricted) 3300024518|Ga0255048_10014091Not Available4177Open in IMG/M
3300025069|Ga0207887_1020482Not Available1045Open in IMG/M
3300025082|Ga0208156_1042624Not Available935Open in IMG/M
3300025251|Ga0208182_1005351Not Available4225Open in IMG/M
3300025251|Ga0208182_1008109Not Available3145Open in IMG/M
3300025251|Ga0208182_1010967All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium2534Open in IMG/M
3300025251|Ga0208182_1049803Not Available872Open in IMG/M
3300025251|Ga0208182_1066502Not Available707Open in IMG/M
3300025267|Ga0208179_1008681All Organisms → Viruses → Predicted Viral3455Open in IMG/M
3300025267|Ga0208179_1066565All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon770Open in IMG/M
3300025267|Ga0208179_1091630Not Available612Open in IMG/M
3300025270|Ga0208813_1071331Not Available730Open in IMG/M
3300025270|Ga0208813_1113031Not Available531Open in IMG/M
3300025274|Ga0208183_1020823All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1489Open in IMG/M
3300025280|Ga0208449_1005642Not Available4973Open in IMG/M
3300025280|Ga0208449_1012127Not Available2975Open in IMG/M
3300025282|Ga0208030_1018167All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2380Open in IMG/M
3300025282|Ga0208030_1052621Not Available1152Open in IMG/M
3300025282|Ga0208030_1073627Not Available911Open in IMG/M
3300025282|Ga0208030_1086927Not Available810Open in IMG/M
3300025282|Ga0208030_1129296Not Available610Open in IMG/M
3300025286|Ga0208315_1076930Not Available827Open in IMG/M
3300025300|Ga0208181_1038539All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium1036Open in IMG/M
3300025301|Ga0208450_1034345Not Available1339Open in IMG/M
3300025301|Ga0208450_1081071Not Available736Open in IMG/M
3300025301|Ga0208450_1121742All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon553Open in IMG/M
3300027844|Ga0209501_10028044All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon4297Open in IMG/M
3300027844|Ga0209501_10233116Not Available1165Open in IMG/M
(restricted) 3300027868|Ga0255053_10365433Not Available698Open in IMG/M
(restricted) 3300027996|Ga0233413_10484526Not Available546Open in IMG/M
(restricted) 3300027996|Ga0233413_10571290Not Available504Open in IMG/M
3300031623|Ga0302123_10029911Not Available3119Open in IMG/M
3300031646|Ga0302133_10542396Not Available504Open in IMG/M
3300034628|Ga0326755_031601Not Available538Open in IMG/M
3300034654|Ga0326741_002101Not Available4342Open in IMG/M
3300034654|Ga0326741_005245Not Available2601Open in IMG/M
3300034654|Ga0326741_024388Not Available1066Open in IMG/M
3300034654|Ga0326741_025233Not Available1046Open in IMG/M
3300034654|Ga0326741_025654Not Available1036Open in IMG/M
3300034654|Ga0326741_036409All Organisms → Viruses → unclassified viruses → Circular genetic element sp.849Open in IMG/M
3300034654|Ga0326741_079063Not Available542Open in IMG/M
3300034656|Ga0326748_018223All Organisms → Viruses → unclassified viruses → Circular genetic element sp.935Open in IMG/M
3300034656|Ga0326748_022287Not Available855Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean53.17%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine11.11%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater7.94%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume7.14%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.35%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater5.56%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume3.17%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.59%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.79%
Water ColumnEnvironmental → Aquatic → Marine → Coastal → Unclassified → Water Column0.79%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.79%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vent Plume0.79%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.79%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001392ELSC MetagenomeEnvironmentalOpen in IMG/M
3300001522Hydrothermal vent plume microbial communities from Mariner/Tui Malila, Pacific Ocean, of black smokersEnvironmentalOpen in IMG/M
3300001679Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific OceanEnvironmentalOpen in IMG/M
3300001680Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific OceanEnvironmentalOpen in IMG/M
3300001681Black smokers hydrothermal plume microbial communities from Abe, Lau Basin, Pacific Ocean - IDBAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300007504Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007512Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300007765Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020460Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)EnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031646Marine microbial communities from Western Arctic Ocean, Canada - CB9_33.1EnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Lau_1000512813300001392Black Smokers Hydrothermal PlumeKQRIKMLTQAERKSLCKSAKSLAEVECITMKRADAVIRWCQKGGY*
Lau_1001054553300001392Black Smokers Hydrothermal PlumeMKLSKAAKSRIRMMTAAEKKALCKSARLLAESETITMKRAEIIIRWCNKAGY*
Lau_1001276963300001392Black Smokers Hydrothermal PlumeMHMKLSRGAKQRIKMLTAAERKSLAKCARVLAECECITMKRADSIIRWSQKGGY*
Lau_1001496153300001392Black Smokers Hydrothermal PlumeMSMKLSRGAKQRIKMLTAAERKSLCKSARLLAETETITMKRADAIIRWCQKGGY*
Lau_1001665843300001392Black Smokers Hydrothermal PlumeMKLSKGAKSRIKLMTAAERKSLAKSARTLAESECITMKRAEAIIRWTQKGGF*
Lau_1003394743300001392Black Smokers Hydrothermal PlumeMMPMKLSKSAKQRIKMLTQAERKSLAKSARVLAECECITMKRADTIIRWSMKSGY*
Lau_1005336263300001392Black Smokers Hydrothermal PlumeMKLSKGAKSRIKLMTAAERKSLAKCARTLAESECITMKRAEAIIRWTQKGGF*
Lau_1005579253300001392Black Smokers Hydrothermal PlumeMKLSKGAKQRIKMLTAAERKSVAKCARTLAECECITMKRADAIIRWSMKSGY*
Lau_1010366033300001392Black Smokers Hydrothermal PlumeMKLSRGAKQRIKMLTAAERKALCKSARALAETETITMKRADAIIRWCQKGGY*
Mariner_120331413300001522Hydrothermal Vent PlumeIELHMQSIDIRFGGLSMKLSKGAKARIKLMTNAERKSLCKSARLLAESEVITMKRAETVIRWCAKGGY*
TahiMoana_101747043300001679Black Smokers Hydrothermal PlumeMKLSKGAKSRIRLMTNPERKSLCKQARALAEAEIITMKRAEAVIRWCNKGGY*
KiloMoana_1001251683300001680Black Smokers Hydrothermal PlumeMMTAAERKSLAKCARVLADNECITMKRAEAIRRWASKGSF*
Abe_1002644463300001681Black Smokers Hydrothermal PlumeMKLSKNAKARIKLMTKAERASLAKAAKLLAESECITMKRASEVLKWCHKGGW*
Abe_1005869353300001681Black Smokers Hydrothermal PlumeMSMKLSRGCKQRIKMLTQAERKSLCKSAKSLAEVECITMKRADAVIRWCQKGGY*
Ga0098033_100648133300006736MarineMKLSKGAKSRIKLMTNAERKSLVKAARLLAESEIITMKRAEAVIRWCNKGGY*
Ga0104999_101877473300007504Water ColumnMKLSKGCKSRIKMMTNAERKSLVKAARLLAEAEVITMARAEAVIRWCAKGGY*
Ga0105016_103936323300007512MarineMKLSKGAKSRIKMMTNAERKSLVKAARLLAESEVITMQRAEAVIRWCAKGGY*
Ga0105010_101691993300007765MarineMKLSKGAKSRIKMMTNAERKSLVKAARLLAESEVITMQRAEAVIRWCVKGGY*
Ga0098062_105007023300008051MarineMKLSKGAKSRIKLMNNAERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY*
Ga0114898_100710743300008216Deep OceanMKLSKGAKSRLDLMSAAERKKICSSTRMLAEAEVISMQRAKAVIKWCNRSRSGF*
Ga0114898_107652613300008216Deep OceanSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114898_112663333300008216Deep OceanMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRW
Ga0114898_113846613300008216Deep OceanMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKS
Ga0114898_115179123300008216Deep OceanGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0114899_110051713300008217Deep OceanKLSKGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0114899_110146943300008217Deep OceanAQLRHDDHYDQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114899_111446123300008217Deep OceanMKLSRGAKSRIKMMTAAEKKTLAKCARTLAESECISMKRAEAIIRWTHKGGY*
Ga0114899_115302013300008217Deep OceanIKMMTAAERKSLAKCARTLAEAECITMTRADAIIRWSMKSGY*
Ga0114899_121410513300008217Deep OceanMKLSKAAKSRLKMMTNAERKAVAKAARLLAESELITLKRGELIIRWCHKGGY*
Ga0114899_124833213300008217Deep OceanGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114904_105051333300008218Deep OceanMKLSKGAKSRIKMMTATERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY*
Ga0114910_1011770103300008220Deep OceanMKLSKGAKSRIKMMTATERKSLVKAARLLAESEVITMKRAETLIKWCSRGGY*
Ga0114910_103397443300008220Deep OceanMKLSKGAKSRIKLMTNAERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY*
Ga0114910_106233913300008220Deep OceanLRHDDHYNQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114910_110490133300008220Deep OceanRHDHHYNQLVIDMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY*
Ga0114910_111108923300008220Deep OceanMKLSKGAKSRIKLMTNAERKQLVKAARALAEAEVITMKRAETLIKWCNKGGY*
Ga0114910_111797033300008220Deep OceanMKLSKGAKARIKMMTASEKKTLAKAARLLAETECITMKRAAAIIRWSHKMC*
Ga0114910_112517613300008220Deep OceanFCYVDHYFEHVIPMKLSKGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0114950_1139483023300009030Deep SubsurfaceMKLSRGAKQRIKMLTAAERKSLCKSARLLAETETITMKRADSIIRWCQKGGY*
Ga0114996_1004097273300009173MarineMKLSKGAKARIKLMTNAERKSLVKAARLLAETEVITMDRCQALIRWCSKGGY*
Ga0114996_1014380453300009173MarineMKLSKGAKSRIKMMTAAERKTLCKSARLLAESEVITMKRAEAVIRWASKGGY*
Ga0114993_1064423123300009409MarineIGGLSMKLSRSCKARIKLMTNAERKSLVKAARLLAETEVITMDRCQALIRWAAKGGY*
Ga0114903_111590823300009412Deep OceanMKLSKGSKQRIKMITAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY*
Ga0114902_109078323300009413Deep OceanMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY*
Ga0114902_109850613300009413Deep OceanKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114902_118767313300009413Deep OceanKKKLASAARLLGETECITMKRAATIIRWSHKAGY*
Ga0114909_101538213300009414Deep OceanKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY*
Ga0114909_102115013300009414Deep OceanQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114909_105225913300009414Deep OceanHYFEHVIPMKLSKGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF
Ga0114909_105449213300009414Deep OceanHYNQLVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0114909_107205113300009414Deep OceanSTYRADVGYEHSSGAQLRHDDHYDQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114908_101012263300009418Deep OceanMKLSKGAKSRIKMMTATERKSLAKAARVLAESECITMKRAEAVIRWCSKGGY*
Ga0114908_114882233300009418Deep OceanVIDMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAI
Ga0114908_117066913300009418Deep OceanRHDDHYDQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY*
Ga0114908_126633123300009418Deep OceanMKLSKGAKLRIKFMNNAERKALCKATRLMAETEVISMKRADTIIKWCQRGGY*
Ga0114900_105723613300009602Deep OceanQFVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY*
Ga0114900_106313233300009602Deep OceanYFEHVIPMKLSKGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0114900_116597913300009602Deep OceanHYYLEYVIPMKLSKRAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0114911_105763133300009603Deep OceanMRDNMKLSKGAKSRIKLMTQAERKSLCKSARALAEAEVITMKRAEALIRWCNRGGF*
Ga0114911_106454813300009603Deep OceanGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY*
Ga0114911_109470313300009603Deep OceanLRHDDHYNQFVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY*
Ga0114911_113517413300009603Deep OceanIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114906_106186933300009605Deep OceanMKLSKGAKARIKMMSAAEKKKLASAARLLGETECITMKRAATIIRWSHKAGY*
Ga0114906_108940013300009605Deep OceanRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY*
Ga0114906_126805623300009605Deep OceanVKLSKSAKSRIKMMTQAEKKALCKAARLLAESETITMKRAEMIMRWCN
Ga0114912_101933023300009620Deep OceanMKLSKGAKSRIKLMTNAERKSLVKAARLLAESEVITMKRAETLIKWCSRGGY*
Ga0114912_104749433300009620Deep OceanEHHYFEHVIPMKLSKGAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF*
Ga0115002_1120685813300009706MarineMKLSKGAKSRIKMMTAAERKTLCKSARLLAESEVITMKRAEAVIRWA
Ga0114999_1129435113300009786MarineTKLHLQGINLRVGGLSMKLSKGAKARIQLMTNAERKSLVKAARLLAETEVITMDRCKALIRWCSKGGY*
Ga0133547_1118674843300010883MarineMKLSKRAKARIKMMTIAEKKTVTKAARTLAECEAISMKRADVI
Ga0181416_107183323300017731SeawaterMKLSKGAKSRIDLMNQSEKKQLAKAARLLAETEAITMDRAKAILRWCNRSNGGY
Ga0181420_120349123300017757SeawaterMKLSKGAKSRIDLMTAAEKKSIAKAARVLAETECITMERARAILRWCNRRNGGY
Ga0181432_1001136123300017775SeawaterMKLSKGAKQRIKMMSASERKSLAKAARTLADAECISMKRADAVIRWTHKGGY
Ga0181432_100223643300017775SeawaterMKLSKGAKARIKLMTNAERKMLCKYARYLAESEIITMKRAETVIKWCNRGGF
Ga0181432_100623983300017775SeawaterMKLSKGCKSRIDLMTQTEKKSLAKAARLLAESECITMQRAKGIIRWCNRSNGGF
Ga0181432_112147923300017775SeawaterMKLSKGAKSRIKLMTNAERKALVKASRLLAESEVITMKRAEAVIRWCNKGGY
Ga0181432_122218423300017775SeawaterMKLSKGAKDRLKMMTNAEKKAVVKAAKLLAESECISMKRAQAIVRTSESKSLWRS
Ga0181424_1017170123300017786SeawaterMKLSKGAKSRIKMMTAAEKKSIAKAARVLAESECISMKRAETIIKWVNKHSGGY
Ga0211486_1049418513300020460MarineKLSKGAKSRIKMMSQAEKKKLASAARLLAETECITMKRGEAIIRWSKKGC
(restricted) Ga0233437_109146513300024259SeawaterMKLSRSAKSRLKMATAAERKSICKAVKLLAESEVITMKRAEAVIKW
Ga0209992_1001460043300024344Deep SubsurfaceMKLSKGCKARIKLMTNAERKSLAKCARQLAEAECITMDRAQSIIRWCNKGGY
(restricted) Ga0255049_1013381243300024517SeawaterMKLSKGAKSRIKMMSATERKSLVKAARLLAESEVITMKRAETLIRWCSKG
(restricted) Ga0255049_1054278713300024517SeawaterGAKSRIKMMSATERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY
(restricted) Ga0255048_10014091143300024518SeawaterMKLSKGAKSRIKMMSATERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY
Ga0207887_102048233300025069MarineLSKGAKSRIKLMTNAERKSLCKSARLLAEAEVITMKRVETVIRWCNKGGY
Ga0208156_104262433300025082MarineMKLSKGAKSRIKLMTNAERKSLVKAARLLAESEIITMKRAEAVIRWCNKGGY
Ga0208182_1005351113300025251Deep OceanMKLSKGAKSRIKMMTATERKSLVKAARLLAESEVITMKRAETLIKWCSRGGY
Ga0208182_100810993300025251Deep OceanVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY
Ga0208182_101096733300025251Deep OceanMKLSKAAKSRLKMMTNAERKAVAKAARLLAESELITLKRGELIIRWCHKGGY
Ga0208182_104980313300025251Deep OceanQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208182_106650213300025251Deep OceanTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208179_100868163300025267Deep OceanMKLSKGAKSRLDLMSAAERKKICSSTRMLAEAEVISMQRAKAVIKWCNRSRSGF
Ga0208179_106656513300025267Deep OceanSSGAQLRHDHHYNQLVIDMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY
Ga0208179_109163033300025267Deep OceanMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMK
Ga0208813_107133123300025270Deep OceanMRDNMKLSKGAKSRIKLMTQAERKSLCKSARALAEAEVITMKRAEALIRWCNRGGF
Ga0208813_111303113300025270Deep OceanRSDVGYEHSSGAQLRHDDHYNQFVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208183_102082313300025274Deep OceanKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208449_100564253300025280Deep OceanMKLSKGAKSRIKLMTNAERKSLVKAARLLAESEVITMKRAETLIRWCNKGGY
Ga0208449_101212713300025280Deep OceanRHDDHYDQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208030_101816783300025282Deep OceanKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSQKGGY
Ga0208030_105262123300025282Deep OceanMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY
Ga0208030_107362713300025282Deep OceanAKSRIKLMTNAERKALCKQARALAEAEVITMKRAEAVIRWCNKGGF
Ga0208030_108692723300025282Deep OceanMKLSRGAKSRIKMMTAAEKKTLAKCARTLAESECISMKRAEAIIRWTHKGGY
Ga0208030_112929613300025282Deep OceanKLSKGAKARIKMMSAAEKKKLASAARLLGETECITMKRAATIIRWSHKAGY
Ga0208315_107693013300025286Deep OceanDQCVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208181_103853913300025300Deep OceanRAWLEMKLSKAAKSRLKMMTNAERKAVAKAARLLAESELITLKRGELIIRWCHKGGY
Ga0208450_103434533300025301Deep OceanVIHMKLSKGSKQRIKMMTAAERKSLAKCARTLAEAECITMKRADAIIRWSMKSGY
Ga0208450_108107113300025301Deep OceanMKLSKGAKARIKMMTASEKKTLAKAARLLAETECITMKRAAAIIRWSHKMC
Ga0208450_112174213300025301Deep OceanTAAERKSLAKCARTLAEAECITMKRADAIIRWSLKSGY
Ga0209501_10028044103300027844MarineMKLSKGAKARIKLMTNAERKSLVKAARLLAETEVITMDRCQALIRWCSKGGY
Ga0209501_1023311623300027844MarineMKLSKGAKSRIKMMTAAERKTLCKSARLLAESEVITMKRAEAVIRWASKGGY
(restricted) Ga0255053_1036543313300027868SeawaterMKLSKGAKSRIKMMSATERKSLVKAARLLAESEIITMKRAETLIRWCNKGGY
(restricted) Ga0233413_1048452623300027996SeawaterMKLSRSAKSRLKMATAAERKSICKAVKLLAESEVITMKRAEAVIKWCNRGGY
(restricted) Ga0233413_1057129023300027996SeawaterMQGINQRIGGLSMKLSKGAKSRVKMMTSAERKALCKAARLLAESEIITMKRAETLIRFASKGGY
Ga0302123_1002991133300031623MarineMKLSRGAKARVKLMTNAERKSLCKAARLLAESEVITMNRAVAVIKWCERGGY
Ga0302133_1054239613300031646MarineKGAKARIKLMTNAERKSLVKAARLLAETEVITMDRCQALIRWCSKGGY
Ga0326755_031601_1_1203300034628Filtered SeawaterLTQAERKSLAKSARVLAECECITMKRADTIIRWSMKSGY
Ga0326741_002101_1643_18013300034654Filtered SeawaterMKLSKGAKARIKLMTNAERKSLVKAARLLAETEVITMDRCQALIRWASKGGY
Ga0326741_005245_1097_12553300034654Filtered SeawaterMKLSKACKSRIKMMTQAERKSLCKSARALADSECITMKRADAVIRWCQKGGY
Ga0326741_024388_62_2203300034654Filtered SeawaterMKLSKGAKSRIRLMSAAERKQVAKAARVLAESECVSMKRAEAIIRWTQKGGF
Ga0326741_025233_426_5933300034654Filtered SeawaterMIAMKLSKSAKQRIKMLTQAERKSLAKSARVLAECECITMKRADTIIRWSMKSGY
Ga0326741_025654_680_8383300034654Filtered SeawaterMKLSKSAKSRIKMMTAAERKQLAKAAKVLAEAECITMKRGDAIIRWTLKGGY
Ga0326741_036409_412_5703300034654Filtered SeawaterMKLSKGAKLRIKFMNNAERKALCKATRLMAETEVISMKRADTIIKWCQRGGY
Ga0326741_079063_3_1223300034654Filtered SeawaterMKLSRGAKQRIKMLTAAERKSLAKCARVLAECECITMKRA
Ga0326748_018223_136_2943300034656Filtered SeawaterMKLSKRAKARIKMMTIAEKKTVTKAARTLAECEAISMKRADVIIRWCNKGGY
Ga0326748_022287_722_8533300034656Filtered SeawaterRIKMMTVAERKSLCKSARLLAESEVITMKRAEAVIRWCTKGGY


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