Metagenome Family F067240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067240
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	64 residues
Representative Sequence	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Number of Associated Samples	102
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.75 %
% of genes near scaffold ends (potentially truncated)	17.46 %
% of genes from short scaffolds (< 2000 bps)	74.60 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.349 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (13.492 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.31% β-sheet: 0.00% Coil/Unstructured: 52.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.2.1: Ribosomal protein L29 (L29p)	d1vq8v1	1vq8	0.78376
a.118.1.1: Armadillo repeat	d1wa5c_	1wa5	0.76743
a.7.8.1: GAT domain	d1wrda1	1wrd	0.74966
a.87.1.1: DBL homology domain (DH-domain)	d1ki1b1	1ki1	0.7352
a.118.1.25: RPA1889-like	d2i9ca1	2i9c	0.73373

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00239	Resolvase	8.73
PF00589	Phage_integrase	7.94
PF12728	HTH_17	3.97
PF11799	IMS_C	3.97
PF13408	Zn_ribbon_recom	3.17
PF08401	ArdcN	2.38
PF07508	Recombinase	2.38
PF01553	Acyltransferase	0.79
PF00180	Iso_dh	0.79
PF02195	ParBc	0.79
PF05235	CHAD	0.79
PF02534	T4SS-DNA_transf	0.79
PF13444	Acetyltransf_5	0.79
PF13463	HTH_27	0.79
PF01402	RHH_1	0.79
PF11171	DUF2958	0.79
PF13502	AsmA_2	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	11.11
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	8.73
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	2.38
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	0.79
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	54.76 %
Unclassified	root	N/A	43.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.32 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.17 %
Hyphomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	2.38 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Hyphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae	0.79 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Magnetospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira	2.38 %
Hyphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas	0.79 %
Acetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter	0.79 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
unclassified Magnetospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira → unclassified Magnetospira	2.38 %
Acetobacter pasteurianus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	0.79 %
Mesorhizobium sophorae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sophorae	0.79 %
Hyphomonas atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas atlantica	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Magnetospira sp. QH-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira → unclassified Magnetospira → Magnetospira sp. QH-2	2.38 %
Acetobacter pasteurianus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	0.79 %
Mesorhizobium sophorae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sophorae	0.79 %
Hyphomonas atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas atlantica	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001398\|JGI20207J14881_1006874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3373	Open in IMG/M
3300001401\|JGI20189J14885_1000033	All Organisms → cellular organisms → Bacteria → Proteobacteria	43961	Open in IMG/M
3300004092\|Ga0062389_101426557	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300004152\|Ga0062386_100061202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira → unclassified Magnetospira → Magnetospira sp. QH-2	2848	Open in IMG/M
3300004635\|Ga0062388_100695752	All Organisms → cellular organisms → Bacteria → Proteobacteria	948	Open in IMG/M
3300005336\|Ga0070680_100548501	Not Available	991	Open in IMG/M
3300005439\|Ga0070711_101741481	Not Available	546	Open in IMG/M
3300005530\|Ga0070679_100563438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300005538\|Ga0070731_10435307	Not Available	873	Open in IMG/M
3300005541\|Ga0070733_10099078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1859	Open in IMG/M
3300005563\|Ga0068855_100370973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300006041\|Ga0075023_100487772	Not Available	552	Open in IMG/M
3300006050\|Ga0075028_100818566	Not Available	569	Open in IMG/M
3300006052\|Ga0075029_100883815	Not Available	612	Open in IMG/M
3300006638\|Ga0075522_10007705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7396	Open in IMG/M
3300006638\|Ga0075522_10009408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6588	Open in IMG/M
3300006638\|Ga0075522_10544615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	534	Open in IMG/M
3300006893\|Ga0073928_10011791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	10143	Open in IMG/M
3300009093\|Ga0105240_10228086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2166	Open in IMG/M
3300009174\|Ga0105241_10527032	Not Available	1057	Open in IMG/M
3300009177\|Ga0105248_12952008	Not Available	542	Open in IMG/M
3300009551\|Ga0105238_11996990	Not Available	614	Open in IMG/M
3300009616\|Ga0116111_1035129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1569	Open in IMG/M
3300009635\|Ga0116117_1160261	Not Available	582	Open in IMG/M
3300009644\|Ga0116121_1267555	Not Available	548	Open in IMG/M
3300009683\|Ga0116224_10478522	Not Available	593	Open in IMG/M
3300009698\|Ga0116216_10586866	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300010373\|Ga0134128_10227749	All Organisms → cellular organisms → Bacteria → Proteobacteria	2094	Open in IMG/M
3300010379\|Ga0136449_100514253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	2074	Open in IMG/M
3300010396\|Ga0134126_10076578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4145	Open in IMG/M
3300010396\|Ga0134126_10275387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1984	Open in IMG/M
3300010396\|Ga0134126_13048397	Not Available	505	Open in IMG/M
3300010399\|Ga0134127_11926681	Not Available	668	Open in IMG/M
3300011269\|Ga0137392_11519197	Not Available	528	Open in IMG/M
3300011270\|Ga0137391_10863183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300012929\|Ga0137404_11910703	Not Available	553	Open in IMG/M
3300013296\|Ga0157374_12125092	Not Available	588	Open in IMG/M
3300014054\|Ga0120135_1005470	Not Available	1279	Open in IMG/M
3300014156\|Ga0181518_10590525	Not Available	518	Open in IMG/M
3300014158\|Ga0181521_10594928	Not Available	519	Open in IMG/M
3300014164\|Ga0181532_10665469	Not Available	562	Open in IMG/M
3300014165\|Ga0181523_10236729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300014165\|Ga0181523_10366508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300014200\|Ga0181526_10449775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300014489\|Ga0182018_10360129	Not Available	782	Open in IMG/M
3300014489\|Ga0182018_10509285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300014495\|Ga0182015_10234401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira → unclassified Magnetospira → Magnetospira sp. QH-2	1216	Open in IMG/M
3300014495\|Ga0182015_10310233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1030	Open in IMG/M
3300014501\|Ga0182024_10718048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium sophorae	1231	Open in IMG/M
3300014501\|Ga0182024_11621417	Not Available	732	Open in IMG/M
3300014655\|Ga0181516_10312427	Not Available	799	Open in IMG/M
3300014658\|Ga0181519_11015671	Not Available	515	Open in IMG/M
3300015197\|Ga0167638_1000370	All Organisms → cellular organisms → Bacteria	10407	Open in IMG/M
3300017822\|Ga0187802_10158219	Not Available	866	Open in IMG/M
3300017823\|Ga0187818_10458035	Not Available	570	Open in IMG/M
3300017938\|Ga0187854_10359032	Not Available	615	Open in IMG/M
3300017946\|Ga0187879_10193054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Hyphomonas → Hyphomonas atlantica	1143	Open in IMG/M
3300017970\|Ga0187783_10821432	Not Available	670	Open in IMG/M
3300017975\|Ga0187782_10966077	Not Available	662	Open in IMG/M
3300017993\|Ga0187823_10182981	Not Available	679	Open in IMG/M
3300017996\|Ga0187891_1041627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1983	Open in IMG/M
3300018003\|Ga0187876_1195682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300018007\|Ga0187805_10107239	Not Available	1264	Open in IMG/M
3300018008\|Ga0187888_1120629	Not Available	1098	Open in IMG/M
3300018012\|Ga0187810_10387220	Not Available	586	Open in IMG/M
3300018021\|Ga0187882_1425914	Not Available	503	Open in IMG/M
3300018022\|Ga0187864_10382473	Not Available	610	Open in IMG/M
3300018026\|Ga0187857_10156288	Not Available	1081	Open in IMG/M
3300018033\|Ga0187867_10428697	Not Available	731	Open in IMG/M
3300018035\|Ga0187875_10115154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1520	Open in IMG/M
3300018037\|Ga0187883_10674593	Not Available	539	Open in IMG/M
3300018040\|Ga0187862_10499756	Not Available	732	Open in IMG/M
3300018042\|Ga0187871_10280427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	923	Open in IMG/M
3300018043\|Ga0187887_10423085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300018044\|Ga0187890_10744448	Not Available	554	Open in IMG/M
3300018047\|Ga0187859_10615078	Not Available	613	Open in IMG/M
3300018057\|Ga0187858_10192713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1335	Open in IMG/M
3300019888\|Ga0193751_1041012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2069	Open in IMG/M
3300021377\|Ga0213874_10010655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2307	Open in IMG/M
3300021406\|Ga0210386_11091388	Not Available	678	Open in IMG/M
3300021475\|Ga0210392_11025743	Not Available	618	Open in IMG/M
3300022557\|Ga0212123_10013846	All Organisms → cellular organisms → Bacteria → Proteobacteria	10410	Open in IMG/M
3300025633\|Ga0208480_1068587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	883	Open in IMG/M
3300025634\|Ga0208589_1072245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300025664\|Ga0208849_1000332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45941	Open in IMG/M
3300025664\|Ga0208849_1003437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7644	Open in IMG/M
3300025679\|Ga0207933_1007615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5518	Open in IMG/M
3300025679\|Ga0207933_1009555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4737	Open in IMG/M
3300025679\|Ga0207933_1026036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2380	Open in IMG/M
3300025679\|Ga0207933_1035288	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300025862\|Ga0209483_1000014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	212044	Open in IMG/M
3300025862\|Ga0209483_1009581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5516	Open in IMG/M
3300025924\|Ga0207694_11582117	Not Available	552	Open in IMG/M
3300025949\|Ga0207667_10640001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300026041\|Ga0207639_11104387	Not Available	744	Open in IMG/M
3300026078\|Ga0207702_11490198	Not Available	670	Open in IMG/M
3300027829\|Ga0209773_10391512	Not Available	577	Open in IMG/M
3300027869\|Ga0209579_10265579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	923	Open in IMG/M
3300027905\|Ga0209415_10178270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2059	Open in IMG/M
3300028047\|Ga0209526_10097043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2075	Open in IMG/M
3300030659\|Ga0316363_10359830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300030706\|Ga0310039_10389157	Not Available	515	Open in IMG/M
3300031236\|Ga0302324_101204269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1009	Open in IMG/M
3300031249\|Ga0265339_10001185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19713	Open in IMG/M
3300031344\|Ga0265316_10929024	Not Available	607	Open in IMG/M
3300031525\|Ga0302326_11449601	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300031595\|Ga0265313_10003372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13004	Open in IMG/M
3300031595\|Ga0265313_10055362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1879	Open in IMG/M
3300031595\|Ga0265313_10370053	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300031670\|Ga0307374_10000853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57238	Open in IMG/M
3300031670\|Ga0307374_10167753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1655	Open in IMG/M
3300031670\|Ga0307374_10487962	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300031670\|Ga0307374_10509265	Not Available	644	Open in IMG/M
3300031671\|Ga0307372_10501274	Not Available	578	Open in IMG/M
3300031708\|Ga0310686_107115717	Not Available	515	Open in IMG/M
3300031708\|Ga0310686_109177819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3093	Open in IMG/M
3300031708\|Ga0310686_114823924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2624	Open in IMG/M
3300032160\|Ga0311301_10010272	All Organisms → cellular organisms → Bacteria → Proteobacteria	30001	Open in IMG/M
3300032160\|Ga0311301_10023137	All Organisms → cellular organisms → Bacteria → Proteobacteria	17149	Open in IMG/M
3300032160\|Ga0311301_11590750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Magnetospira → unclassified Magnetospira → Magnetospira sp. QH-2	797	Open in IMG/M
3300032160\|Ga0311301_12935614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300032770\|Ga0335085_11540716	Not Available	691	Open in IMG/M
3300032805\|Ga0335078_10303140	All Organisms → cellular organisms → Bacteria → Proteobacteria	2147	Open in IMG/M
3300032805\|Ga0335078_11959052	Not Available	629	Open in IMG/M
3300032828\|Ga0335080_11973723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300033887\|Ga0334790_025793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.30%
Host-Associated	Host-Associated	12.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.97%
Aquatic	Environmental → Aquatic	33.33%
Plants	Host-Associated → Plants	12.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.59%
Freshwater	Environmental → Aquatic → Freshwater	29.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Sediment	Environmental → Aquatic → Sediment	2.38%
Peat	Environmental → Terrestrial → Peat	2.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.59%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.76%
Clay	Environmental → Terrestrial → Soil → Clay	3.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.97%
Loam	Environmental → Terrestrial → Soil → Loam	3.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.59%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.97%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.38%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.49%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.17%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.38%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.59%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.79%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20207J14881_10068743	3300001398	Arctic Peat Soil	MSTVYTMSALQTLTDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
JGI20189J14885_10000331	3300001401	Arctic Peat Soil	MSTVYTLSALLHLSDLQLRGLLNRARYDLDCSTRGSIERRDALLNLEIIHRVLAQRRAQPRPPGC*
Ga0062389_1014265571	3300004092	Bog Forest Soil	QTLSDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
Ga0062386_1000612025	3300004152	Bog Forest Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSVKGSIERRDALLNLEIIHRALAVRRAQHRPPGF*
Ga0062388_1006957521	3300004635	Bog Forest Soil	MSTVYTMSALQTLSDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
Ga0070680_1005485011	3300005336	Corn Rhizosphere	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRNALLNLEIICRAIT
Ga0070711_1017414811	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSLKGSIERRDALLNIEIIHRAIRVRRSLPRFPGRF*
Ga0070679_1005634381	3300005530	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSLKGSIERRDALLNFEIICRAITIRRAQHRPPGF*
Ga0070731_104353072	3300005538	Surface Soil	MSTVYTLSALLHLTDMQLRGLLHRARYDLNCSLQGSIERRDALLNLEIICRAITIRRAQHRPPGF*
Ga0070733_100990781	3300005541	Surface Soil	MSTVYTLSALQTLSDRQLRALLSKARYDLDCSIAGSYERRDALLNLENIRRVLANRLMRPRPPGC*
Ga0068855_1003709735	3300005563	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLHRARYDLNCSVKGSIERRDALLNLEIICRALTIHRAQHRPPGF*
Ga0075023_1004877722	3300006041	Watersheds	MSTVYTLSALLHLSDMQLRGLLNRARYDLNCSIKGSIERRDALLNIEIIHRALAVRRSLPRPPGCF*
Ga0075028_1008185662	3300006050	Watersheds	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIIHRALAVRPSLPRPPGCF*
Ga0075029_1008838152	3300006052	Watersheds	MSTVYTLSALLHLTDMQLRGLLNRAHYDLNCSLKGSIERRDALLNLEIICRAITIRRAQHRPPGC*
Ga0075522_100077053	3300006638	Arctic Peat Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIICRVIALRRVRPRPPGF*
Ga0075522_100094088	3300006638	Arctic Peat Soil	MSTVYTLTALLHLSDLQLRGLLNRARYDLDCSTPGSIERRDALINLEIIHRVIVQRRARPRPPGF*
Ga0075522_105446152	3300006638	Arctic Peat Soil	MSTVYSTSALQTLSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC*
Ga0073928_100117919	3300006893	Iron-Sulfur Acid Spring	MSTVYTTSALLHLSDLQLRGLLNRARYDLDCSTPGSIERRDALLNLDIICRVLAQRRARPRPPGF*
Ga0105240_102280865	3300009093	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSLKGSIERRDALLNLEIICRAITIRRAQHRPPGC*
Ga0105241_105270321	3300009174	Corn Rhizosphere	MSTVYTLSALLHLSDLELRGLRNRARYDLDCSIAGSIERRDALLNLEIIHRAIAVRRAQHRPSG
Ga0105248_129520082	3300009177	Switchgrass Rhizosphere	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRRTRPRPPGVF*
Ga0105238_119969901	3300009551	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSTKGSIERRDALLNLEIICRAITIRRAQHRPPGF*
Ga0116111_10351291	3300009616	Peatland	MSTVYSTSALQDLSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGF*
Ga0116117_11602611	3300009635	Peatland	MSALQTLSDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
Ga0116121_12675551	3300009644	Peatland	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSMRPRPPGC*
Ga0116224_104785221	3300009683	Peatlands Soil	MSALLHLSDLQLRGLLNRARYDLDCSIAGSIERRDALLNLDIIHRALAQRRARPRPPGC*
Ga0116216_105868661	3300009698	Peatlands Soil	LSDLQLRGLLQRARYDLDCSIAGSYERRDALLNLENIRRVLAQRCARPRPPGF*
Ga0134128_102277491	3300010373	Terrestrial Soil	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSFRPRPPGC*
Ga0136449_1005142534	3300010379	Peatlands Soil	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRRARPRPPGCF*
Ga0134126_100765782	3300010396	Terrestrial Soil	MSTVYTLSALLHLSDMQLRGLLNRARYDLNCSLKGSIERRDALLNIEIIHRAIRVRRSLSHPPGRF*
Ga0134126_102753873	3300010396	Terrestrial Soil	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSTKGSVERRDALLNLEIIHRALAVRRAQPRPPGC*
Ga0134126_130483971	3300010396	Terrestrial Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIIHRAIAVRRAQHRPPGF*
Ga0134127_119266811	3300010399	Terrestrial Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIICRAITIRRAQHRPPGF*
Ga0137392_115191971	3300011269	Vadose Zone Soil	MSALQTLSDRQLRALLCKARYDLDCSTPGSIERRDALLNLEIICRAITLRRARPRPPGF*
Ga0137391_108631833	3300011270	Vadose Zone Soil	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRRARPRPPGF*
Ga0137404_119107032	3300012929	Vadose Zone Soil	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRHARPRPPGF*
Ga0157374_121250921	3300013296	Miscanthus Rhizosphere	MSTVYTLSALLHLSELQLRGLRNRARYDLNCSIAGSIERRDALLNLEIICRAITLKRSHPRPPGSF*
Ga0120135_10054703	3300014054	Permafrost	MSTVYSTSALQALSNLQLRGLLCKARYDLDCSTPGSFERRDALINLEIICRVIALRRVRPRPPGF*
Ga0181518_105905251	3300014156	Bog	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSARPRPPGC*
Ga0181521_105949281	3300014158	Bog	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSMRP
Ga0181532_106654691	3300014164	Bog	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSTKGSIERRDALLNLEIIHRALAVRRAQPRPPGC*
Ga0181523_102367291	3300014165	Bog	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSLKGSIERRDALLNLEIICRAIT
Ga0181523_103665081	3300014165	Bog	RRRKSMFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSFRPRPPGC*
Ga0181526_104497753	3300014200	Bog	ALQALSNLQLRGLLCKARYDLNSSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC*
Ga0182018_103601292	3300014489	Palsa	MSTVYSTSALQALSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIKRILAYRLMRPRPPGC*
Ga0182018_105092851	3300014489	Palsa	PRGQQRRKSMSTVYSTSALQSLSNLQLRGLLCKARYDLDCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
Ga0182015_102344011	3300014495	Palsa	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSVKGSIERRDALLNIEIIHRAIAVRRAQHRPPGF*
Ga0182015_103102333	3300014495	Palsa	MFTVYTTSALQHLSDMQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSARPRPPGC*
Ga0182024_107180483	3300014501	Permafrost	MSALQTLSDRQLRGLLCKARYDLDCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC*
Ga0182024_116214171	3300014501	Permafrost	SMSTVYSTSALQALSNLQLGGLLCKARYDLNCSTPNSFERRDALINLENIRRVLAHRLMCPRPPGC*
Ga0181516_103124271	3300014655	Bog	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSLRGSIERRDALLNLEIIHRAIAVRRAQHRPLGC*
Ga0181519_110156711	3300014658	Bog	MSALQTLSDRQLRALLCNARYDLGCSTLGSFERRDALINLENIRRVLAHRLMCPRPPGC*
Ga0167638_100037012	3300015197	Glacier Forefield Soil	MSTVYSTSALQSLSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC*
Ga0187802_101582191	3300017822	Freshwater Sediment	MSTVYTLSALLHLTDLQLRGLLNRARYYLDCSTKGSIERRDALLNLEIIHRALAVRRAQPRPPGC
Ga0187818_104580352	3300017823	Freshwater Sediment	MSTVYTMSALQTLSDRQLRALLCKARYDLDCSTPGSFERRDALINLENIRRVLAYRLMRPRPPGC
Ga0187854_103590321	3300017938	Peatland	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPGSFERRDTLINLENIRRVLAHRLMCPRPPG
Ga0187879_101930543	3300017946	Peatland	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSMRPRPTGC
Ga0187783_108214323	3300017970	Tropical Peatland	SMSTVYTLSALLHLSDLQLRGLLNRARYDLNCSLKGSVERRDALLNIEIIHRAIAVRRSQPRFPGCF
Ga0187782_109660772	3300017975	Tropical Peatland	MSTVYTLSALLHLSELQLRGLLHRARYDLNCSLKGSIERRDALLNIQIIHRAIAVRRSQPRPPGCF
Ga0187823_101829811	3300017993	Freshwater Sediment	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSTKGSIERRDALLNLEIIHRAIAVRRAQHRPPGF
Ga0187891_10416274	3300017996	Peatland	MSTVYSTSALQSLSNLQLRGLLCKARYDLNCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187876_11956821	3300018003	Peatland	MSTVYSTSALQSLSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGF
Ga0187805_101072393	3300018007	Freshwater Sediment	MSTVYSTSALQALSDRQLRALLCKARYDLDCSTPGSFERRDALINLENIRRVLAHRLMRPRPPGC
Ga0187888_11206293	3300018008	Peatland	MSTVYSTSALQALSNLQLRGLLCKARYDLNCSAPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187810_103872201	3300018012	Freshwater Sediment	MSTVYTLSALLHLTDMQLRGLLNRARYALNCSLKGSIERRDALLNLEIIHRAIAVRR
Ga0187882_14259142	3300018021	Peatland	MSTVYSTSALQALSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGC
Ga0187864_103824732	3300018022	Peatland	MSTVYSTSALLALSNLQLRSLLCKTRYDLDCSTPGSFERRDALINLENVRRVLAHRLMCPRPPGF
Ga0187857_101562882	3300018026	Peatland	MSTVYTLSALLHLSDLQLRGLLNRARYDLNCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187867_104286971	3300018033	Peatland	MSTVYSTSALQALSNFQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGC
Ga0187875_101151543	3300018035	Peatland	MSTVYSTSALQALSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187883_106745931	3300018037	Peatland	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSMRPRPPGC
Ga0187862_104997561	3300018040	Peatland	MSTVYSTSALQALSNFQLRGLLCKARYDLDHSTPGSFERRDALINLENIKRVLAYRLMRPHPPGC
Ga0187871_102804272	3300018042	Peatland	MSTVYSMSALQALSNLQLRGLLCKARYDLDCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187887_104230852	3300018043	Peatland	MSTVYSTSALQSLSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0187890_107444481	3300018044	Peatland	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSLKGSIERRDALLNLEIIHRAIAVRRAQPRPPGF
Ga0187859_106150781	3300018047	Peatland	MSTVYSTSALQALSNLQLRGLLCKARYDLNCSTPNSFERRDALINLENIKRVLAHRLMCPRPPGC
Ga0187858_101927132	3300018057	Peatland	MFTVYTTSALQHLSDLQLRGLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSFRPRPPGC
Ga0193751_10410124	3300019888	Soil	MSTVYTLSALLHLSELQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRRARPRPPGC
Ga0213874_100106552	3300021377	Plant Roots	MSTVYTLSALLHLSEHQLRGLLNRARYDLNCSLKGSIERRDALLNLEIIHRAINVRRAQHRPPGF
Ga0210386_110913881	3300021406	Soil	MSTVYTTSALQTLSDLQLRGLLQRARYDLDCSIVGSYERRDALLNLENICRVLAQRRA
Ga0210392_110257431	3300021475	Soil	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITIRRAQHRPPGC
Ga0212123_100138465	3300022557	Iron-Sulfur Acid Spring	MSTVYTTSALLHLSDLQLRGLLNRARYDLDCSTPGSIERRDALLNLDIICRVLAQRRARPRPPGF
Ga0208480_10685873	3300025633	Arctic Peat Soil	YTMSALQTLSDRQLRALLCKARYDLNCSTPGSFERRDTLINLENIRRVLANRLMRPRPPG
Ga0208589_10722453	3300025634	Arctic Peat Soil	MSTVYTMSALQTLSNLQLRGLLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC
Ga0208849_100033241	3300025664	Arctic Peat Soil	MSTVYTLSALLHLSDLQLRGLLNRARYDLDCSTRGSIERRDALLNLEIIHRVLAQRRAQPRPPGC
Ga0208849_10034376	3300025664	Arctic Peat Soil	MSTVYTMSALQTLSDRQLRALLCKARYDLNCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC
Ga0207933_10076153	3300025679	Arctic Peat Soil	MSTVYTTSALLNLSDLQLRGLLNRARYDLDCSIAGSYERRDALLNLEIICRVLAQRRARPRPPGC
Ga0207933_10095553	3300025679	Arctic Peat Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIIHRALAVRRALPRPPGCL
Ga0207933_10260361	3300025679	Arctic Peat Soil	MSTVYTMSALQTLTDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC
Ga0207933_10352881	3300025679	Arctic Peat Soil	SALQALSNLQLRGLLCKARYDLNCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0209483_100001420	3300025862	Arctic Peat Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIICRVIALRRVRPRPPGF
Ga0209483_10095812	3300025862	Arctic Peat Soil	MTALMVGAAKTTEEKSMSTVYTLTALLHLSDLQLRGLLNRARYDLDCSTPGSIERRDALINLEIIHRVIVQRRARPRPPGF
Ga0207694_115821171	3300025924	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSTKGSIERRDALLNLEIICRAITIRRAQHRPPGF
Ga0207667_106400012	3300025949	Corn Rhizosphere	MSTVYTLSALLHLTDMQLRGLLHRARYDLNCSVKGSIERRDALLNLEIICRALTIHRAQHRPPGF
Ga0207639_111043872	3300026041	Corn Rhizosphere	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSIAGSIERRDALLNLEIICRAITLKRAHPRPPGCF
Ga0207702_114901982	3300026078	Corn Rhizosphere	MSTVYTLSALLHLTDLQLRGLLNRARYDLNCSVKGSIERRDALLNLEIICRAITIRRAQHRPPGF
Ga0209773_103915122	3300027829	Bog Forest Soil	MSTVYTTSALQTLSDRQLRGLLSKARYDLDCSTPGSVERRDALINLENIRRVLANR
Ga0209579_102655792	3300027869	Surface Soil	MSTVYTLSALLHLTDMQLRGLLHRARYDLNCSLQGSIERRDALLNLEIICRAITIRRAQHRPPGF
Ga0209415_101782702	3300027905	Peatlands Soil	MSTVYTLSALLHLSDLQLRGLLNRARYDLDCSTKGSIERRDALLNLEIIHRALAVRRAQPRPPGF
Ga0209526_100970435	3300028047	Forest Soil	MSTVYTLSALLHLTDMQLRGLLHRARYDLNCSLKGSIERRDALLNLEIICRAITIRRAQHRPPGC
Ga0316363_103598302	3300030659	Peatlands Soil	MSTVYSTSALQTLSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0310039_103891571	3300030706	Peatlands Soil	MSTVYSTSALQALSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGCF
Ga0302324_1012042693	3300031236	Palsa	MSTVYTMSALQTLSDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC
Ga0265339_1000118518	3300031249	Rhizosphere	MSTVYTTSALQNRSDLELQALLRQARYDLDCSLAGSSERRDALVNLEVIGRVIAQRRARPRPPGF
Ga0265316_109290241	3300031344	Rhizosphere	MSTVYTTSALQNRSDLELQALLRQARYDLDCSLAGSSDRRNALVNLEVIGRVIAQRRARPRPPGF
Ga0302326_114496013	3300031525	Palsa	MSTVYSTSALQALSNLQLRGLLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC
Ga0265313_100033721	3300031595	Rhizosphere	MSTVYTLSALLHLSDMQLRGLLHRARYDLNCSLKGSIERRDALLNLEIIHRAIAVRRAQHRPPGF
Ga0265313_100553623	3300031595	Rhizosphere	MSTVYTLSALLHLSDMQLRGLLNRARYDLNCSIKGSIERRDALLNLEIICRVIALRRVRPRPPGF
Ga0265313_103700532	3300031595	Rhizosphere	MSTVYTTSALLHLSDLQLRGLLNRARYDLDCSTAGSVERRDALINLENIRRVLAHRLMCPRPPGC
Ga0307374_1000085321	3300031670	Soil	MSTVYSTSALQALTNRQLRGLLCKARYDLGCSAPGSFERRDALINLENIRRVLACRLMRPHPPGC
Ga0307374_101677532	3300031670	Soil	MSTVYTMSALQTLSDRQLRALLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0307374_104879621	3300031670	Soil	TSALQALSNLQLRGLLCKARYDLDHSTPGSFERRDALINLENIRRILAHRLMCPRPPGC
Ga0307374_105092651	3300031670	Soil	MSTVYTLTALLHLSDLQLRGLLNRARYDLNCSTKGSVERRDALLNLQIIHRVLAERRARPRPPGC
Ga0307372_105012741	3300031671	Soil	MSTVYSTSALQALSNLQLRGLLCKARYDLNCSAPGSFERRDALINLEIICRVIAQRRARPRPPGF
Ga0310686_1071157171	3300031708	Soil	MFTVYTTSALQHLSDLQLRSLLRRVRYDLDCSTPNSYERRDALLTIENIYRVLAQRSMRPRPPGC
Ga0310686_1091778197	3300031708	Soil	MSTVYTTSALQTLSDRQLRGLLSKARYDLDWSTPGSFERRDALINLENIRRVLANRLMRPRPPGC
Ga0310686_1148239246	3300031708	Soil	MSTVYSTSALQTLSNLQLRGLLCKARYDLGCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGF
Ga0311301_100102724	3300032160	Peatlands Soil	MSTVYTMSALLHLSDLQLRGLLNRARYDLDCSIAGSIERRDALLNLDIIHRALAQRRARPRPPGC
Ga0311301_1002313719	3300032160	Peatlands Soil	MSTVYTLSALLHLSDLQLRGLRNRARYDLDCSTPGSIERRDALLNLEIICRAITLRRARPRPPGCF
Ga0311301_115907501	3300032160	Peatlands Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSVKGSIERRDALLNLEIIHRALAVRRAQHRPPGF
Ga0311301_129356142	3300032160	Peatlands Soil	MSTVYSTSALQALSNLQLRGLLCKARYDLNCSTPGSFERRDALINLENIRRVLAHRLMCPRPPGC
Ga0335085_115407161	3300032770	Soil	MSTVYTLSALLHLSELQLRGLLHRARYDLNCSLKGSIERRDALLNIQIIHRAIAVR
Ga0335078_103031401	3300032805	Soil	ELQALLRQARYDLDCSLAGSSERRDALVNLEVIGRVIAQRRARPRPPGF
Ga0335078_119590522	3300032805	Soil	MSTVYTLSALLHLTDMQLRGLLNRARYDLNCSIKGSIERRDALLNIEIIHRAIAVRRAQHRPPGF
Ga0335080_119737231	3300032828	Soil	REDNEEKIMSTVYTTSALQNFSDLQLQALLRQARYDLDCSLAGSSERRDALVNLEVIGRVLAQRRARPRPPGF
Ga0334790_025793_1401_1580	3300033887	Soil	MSALQTLSDRQLRALLCKARYDLGCSTPGSFERRDTLINLENIRRVLANRLMRPRPPGC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067240

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences