Metagenome / Metatranscriptome Family F067227

Basic Information
Family ID	F067227
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL
Number of Associated Samples	114
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.38 %
% of genes near scaffold ends (potentially truncated)	96.83 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (84.127 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.524 % of family members)
Environment Ontology (ENVO)	Unclassified (52.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.937 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.66% β-sheet: 22.78% Coil/Unstructured: 64.56%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF14031	D-ser_dehydrat	48.41
PF05118	Asp_Arg_Hydrox	3.97
PF08281	Sigma70_r4_2	2.38
PF14342	DUF4396	2.38
PF03401	TctC	1.59
PF01263	Aldose_epim	1.59
PF01650	Peptidase_C13	1.59
PF13468	Glyoxalase_3	0.79
PF00535	Glycos_transf_2	0.79
PF07690	MFS_1	0.79
PF14559	TPR_19	0.79
PF13577	SnoaL_4	0.79
PF00903	Glyoxalase	0.79
PF07859	Abhydrolase_3	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	3.97
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	1.59
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	1.59
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.59
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	1.59
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.13 %
Unclassified	root	N/A	15.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.13 %
Unclassified	root	N/A	15.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.13 %
Unclassified	root	N/A	15.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.86 %
Unclassified	root	N/A	15.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	31.75 %
Unclassified	root	N/A	15.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.17 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	23.02 %
Unclassified	root	N/A	15.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Unclassified	root	N/A	15.87 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.79 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Unclassified	root	N/A	15.87 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.79 %
Pseudovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio	0.79 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Unclassified	root	N/A	15.87 %
unclassified Pseudovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio	0.79 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.79 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Unclassified	root	N/A	15.87 %
Pseudovibrio sp. JE062	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio → Pseudovibrio sp. JE062	0.79 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.79 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10013455	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300001213\|JGIcombinedJ13530_107071442	Not Available	512	Open in IMG/M
3300001213\|JGIcombinedJ13530_108798190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	617	Open in IMG/M
3300001431\|F14TB_100049269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300001431\|F14TB_109574875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio → Pseudovibrio sp. JE062	537	Open in IMG/M
3300005093\|Ga0062594_100527988	Not Available	1008	Open in IMG/M
3300005171\|Ga0066677_10228593	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005280\|Ga0065696_1043431	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005290\|Ga0065712_10712660	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005293\|Ga0065715_10105753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2873	Open in IMG/M
3300005327\|Ga0070658_10877907	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005328\|Ga0070676_10261322	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005335\|Ga0070666_11346212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300005347\|Ga0070668_100495895	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300005353\|Ga0070669_101367490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300005355\|Ga0070671_101581654	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300005355\|Ga0070671_101745190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	553	Open in IMG/M
3300005364\|Ga0070673_101517653	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005366\|Ga0070659_100232987	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300005438\|Ga0070701_10754697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	659	Open in IMG/M
3300005456\|Ga0070678_100466058	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300005456\|Ga0070678_101266354	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005564\|Ga0070664_100825128	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005615\|Ga0070702_101774719	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005617\|Ga0068859_100828641	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005618\|Ga0068864_102169144	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005840\|Ga0068870_10997307	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005842\|Ga0068858_101701815	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005843\|Ga0068860_101973030	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006032\|Ga0066696_10333143	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300006056\|Ga0075163_12005508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	538	Open in IMG/M
3300006642\|Ga0075521_10265577	All Organisms → cellular organisms → Bacteria → Proteobacteria	822	Open in IMG/M
3300006806\|Ga0079220_10067740	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300006847\|Ga0075431_100957307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	824	Open in IMG/M
3300006852\|Ga0075433_11270558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	638	Open in IMG/M
3300006854\|Ga0075425_100987013	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300006871\|Ga0075434_100404950	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385	Open in IMG/M
3300006904\|Ga0075424_102741436	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006930\|Ga0079303_10540393	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009098\|Ga0105245_10627743	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300009101\|Ga0105247_11041287	Not Available	642	Open in IMG/M
3300009131\|Ga0115027_10434022	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300009177\|Ga0105248_12538637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	584	Open in IMG/M
3300009177\|Ga0105248_12596196	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010325\|Ga0134064_10307490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	606	Open in IMG/M
3300010401\|Ga0134121_11085835	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300011106\|Ga0151489_1559429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	756	Open in IMG/M
3300012045\|Ga0136623_10468158	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012497\|Ga0157319_1055483	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012513\|Ga0157326_1058887	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012930\|Ga0137407_12087256	Not Available	541	Open in IMG/M
3300012960\|Ga0164301_10207122	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300012984\|Ga0164309_11935865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300013105\|Ga0157369_10078934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3526	Open in IMG/M
3300013105\|Ga0157369_12493782	Not Available	523	Open in IMG/M
3300013296\|Ga0157374_12183852	Not Available	580	Open in IMG/M
3300013308\|Ga0157375_10118613	All Organisms → cellular organisms → Bacteria	2753	Open in IMG/M
3300014497\|Ga0182008_10580936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	626	Open in IMG/M
3300014502\|Ga0182021_12963448	Not Available	569	Open in IMG/M
3300014969\|Ga0157376_12406485	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300015200\|Ga0173480_11151014	Not Available	521	Open in IMG/M
3300015372\|Ga0132256_101073273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	920	Open in IMG/M
3300015373\|Ga0132257_101219206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	953	Open in IMG/M
3300015374\|Ga0132255_101084194	Not Available	1203	Open in IMG/M
3300017792\|Ga0163161_10557626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	940	Open in IMG/M
3300018081\|Ga0184625_10210061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300018481\|Ga0190271_10380933	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300019362\|Ga0173479_10076917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300019362\|Ga0173479_10482584	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300019888\|Ga0193751_1193107	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300020081\|Ga0206354_10491770	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300025315\|Ga0207697_10395458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	614	Open in IMG/M
3300025321\|Ga0207656_10196508	Not Available	973	Open in IMG/M
3300025893\|Ga0207682_10307313	Not Available	744	Open in IMG/M
3300025903\|Ga0207680_11098176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300025906\|Ga0207699_10438043	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300025909\|Ga0207705_10632829	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300025919\|Ga0207657_11160984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300025920\|Ga0207649_10231743	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300025926\|Ga0207659_11477246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	582	Open in IMG/M
3300025931\|Ga0207644_11410381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300025932\|Ga0207690_11557302	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025934\|Ga0207686_10083780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2087	Open in IMG/M
3300025937\|Ga0207669_10585969	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300025941\|Ga0207711_11147627	Not Available	718	Open in IMG/M
3300025942\|Ga0207689_11377144	Not Available	592	Open in IMG/M
3300025945\|Ga0207679_10697129	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300025960\|Ga0207651_10385886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300025972\|Ga0207668_10627238	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300025981\|Ga0207640_11055970	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300026035\|Ga0207703_10592122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1048	Open in IMG/M
3300026121\|Ga0207683_11187013	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300026121\|Ga0207683_11908965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	543	Open in IMG/M
3300026323\|Ga0209472_1213640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	638	Open in IMG/M
3300027717\|Ga0209998_10006244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2476	Open in IMG/M
3300027841\|Ga0209262_10201585	Not Available	962	Open in IMG/M
3300027902\|Ga0209048_10005097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12455	Open in IMG/M
3300028379\|Ga0268266_11820294	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300028379\|Ga0268266_12313854	Not Available	509	Open in IMG/M
3300028381\|Ga0268264_10980980	Not Available	851	Open in IMG/M
3300028381\|Ga0268264_12449121	Not Available	528	Open in IMG/M
3300028587\|Ga0247828_10377337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	809	Open in IMG/M
3300028589\|Ga0247818_11389388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300028592\|Ga0247822_11443832	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300028861\|Ga0302259_1097213	Not Available	715	Open in IMG/M
3300029923\|Ga0311347_10258085	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300030047\|Ga0302286_10303994	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300030114\|Ga0311333_10067594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2599	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1126727	Not Available	561	Open in IMG/M
3300031564\|Ga0318573_10063935	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300031564\|Ga0318573_10459594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	685	Open in IMG/M
3300031777\|Ga0318543_10169315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	964	Open in IMG/M
3300031939\|Ga0308174_11003749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	708	Open in IMG/M
3300031995\|Ga0307409_100658022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1042	Open in IMG/M
3300031996\|Ga0308176_11158446	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300032002\|Ga0307416_100971170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	952	Open in IMG/M
3300032066\|Ga0318514_10032221	All Organisms → cellular organisms → Bacteria → Proteobacteria	2464	Open in IMG/M
3300032074\|Ga0308173_11322816	Not Available	675	Open in IMG/M
3300032179\|Ga0310889_10464789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	637	Open in IMG/M
3300032782\|Ga0335082_10073413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3456	Open in IMG/M
3300033289\|Ga0310914_11137160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	682	Open in IMG/M
3300033418\|Ga0316625_100949344	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	759	Open in IMG/M
3300033486\|Ga0316624_11496354	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300033486\|Ga0316624_12184269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	515	Open in IMG/M
3300034195\|Ga0370501_0307763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	572	Open in IMG/M
3300034820\|Ga0373959_0101446	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.56%
Environmental	Environmental	43.65%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.56%
Terrestrial	Environmental → Terrestrial	38.10%
Aquatic	Environmental → Aquatic	5.56%
Wastewater	Engineered → Wastewater	0.79%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.71%
Soil	Environmental → Terrestrial → Soil	34.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.84%
Freshwater	Environmental → Aquatic → Freshwater	3.17%
Peat	Environmental → Terrestrial → Peat	3.17%
Marine	Environmental → Aquatic → Marine	1.59%
Sediment	Environmental → Aquatic → Sediment	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.79%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Soil	Host-Associated → Plants → Rhizoplane → Soil	3.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.79%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Pond	Environmental → Aquatic → Freshwater → Pond	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.17%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.79%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100134552	3300000891	Soil	AGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
JGIcombinedJ13530_1070714421	3300001213	Wetland	LPDHGLRVAAIAGEHPEPAVVRAELAALGLSEVLKVTYAKSPRLAAMIRTARGVATL*
JGIcombinedJ13530_1087981901	3300001213	Wetland	DHGLRVAAIAGEHPEPAVVRAELAALGLSDTLKVTYAKSPRLAAMIRTARGVATL*
F14TB_1000492692	3300001431	Soil	GLRLTAIAGEHPEPAAVRAPLAMLGLSDTLKVTYAKSPRLAAMIRTARGVATL*
F14TB_1095748752	3300001431	Soil	DSGRRLAALAGEHPEPDTVRKEIAALGLTDTLKVTYAKSPRLAAMIRTPRGIATL*
Ga0062594_1005279882	3300005093	Soil	EHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL*
Ga0066677_102285931	3300005171	Soil	ITLAGEHPEPAPIRAALTALGVSDTLKVTYERSPRLAAMLRTPQGIVTL*
Ga0065696_10434312	3300005280	Switchgrass Rhizosphere Bulk Soil	XLPDSGVLFVTMAGEHPEPGAGARALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0065712_107126601	3300005290	Miscanthus Rhizosphere	GEHPEPAPLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0065715_101057531	3300005293	Miscanthus Rhizosphere	PDSGVQLVTMAGEHPEPAPLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0070658_108779073	3300005327	Corn Rhizosphere	TLLDSGLRLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0070676_102613222	3300005328	Miscanthus Rhizosphere	LVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070666_113462121	3300005335	Switchgrass Rhizosphere	VALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0070668_1004958951	3300005347	Switchgrass Rhizosphere	VTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0070669_1013674901	3300005353	Switchgrass Rhizosphere	DLMPDSSRRLVALAGEHLEPALVRTDIAALGLSEVLKVTYAKSPRLAAMIRTPRGVATL*
Ga0070671_1015816541	3300005355	Switchgrass Rhizosphere	SDRLADGGIRLVTLGGEHPDPGRIRAGLASLGLSETLKVSYGRHPRLAAMLRTPRGIVTL
Ga0070671_1017451902	3300005355	Switchgrass Rhizosphere	GEHPDPAPVRAAIARLGLAEDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0070673_1015176532	3300005364	Switchgrass Rhizosphere	MAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070659_1002329873	3300005366	Corn Rhizosphere	QSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070701_107546971	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TGLRLAAIAGEHPEPAAVRAPLATLGLSDTLKVTYAKSPRLAAMIRTARGVATL*
Ga0070678_1004660582	3300005456	Miscanthus Rhizosphere	QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0070678_1012663541	3300005456	Miscanthus Rhizosphere	GRRLVVLAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL*
Ga0070664_1008251282	3300005564	Corn Rhizosphere	VQLIALAGEHPEPAQVRAALAALSLSETLKVTYGRSPRLAAMLRTPRGVVAL*
Ga0070702_1017747191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0068859_1008286414	3300005617	Switchgrass Rhizosphere	DSGRRLVVVAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068864_1021691441	3300005618	Switchgrass Rhizosphere	AMEDSGRRLVLIAGEHPEPDHVRRQIAALGLAATLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068870_109973071	3300005840	Miscanthus Rhizosphere	GRRLVLIAGEHPEPDHVRRQIAALGLAATLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068858_1017018151	3300005842	Switchgrass Rhizosphere	CTLAVMAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI*
Ga0068860_1019730302	3300005843	Switchgrass Rhizosphere	PDANLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL*
Ga0066696_103331433	3300006032	Soil	GIRIVTLAGEHPDPAPIRATLVALGLADTLKVTYAQYARLAAMFRAPQGIVTF*
Ga0075163_120055082	3300006056	Wastewater Effluent	DSGLRLALVAGEHPEPAIVRAELAQLGLSDTMKVTFAKSPRIAAMIRTPRGVATL*
Ga0075521_102655772	3300006642	Arctic Peat Soil	SGLRLAAIAGEHPDPAAVRSELATLGLSETLKVTYAKSPRLAAMIRTPRGVATL*
Ga0079220_100677401	3300006806	Agricultural Soil	LPAAGVHLVALAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI*
Ga0075431_1009573071	3300006847	Populus Rhizosphere	AGEHPDPAPVRAALAALGLSDTLKVTYGRHPRLAAMLRTPRGLITL*
Ga0075433_112705582	3300006852	Populus Rhizosphere	ADALPPAGVHLVALAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI
Ga0075425_1009870132	3300006854	Populus Rhizosphere	LPDSGIRLVALAGEHPDPATIRAALASLQLSDPLKVTYGRHPRLAAMLRTPRGIVTL*
Ga0075434_1004049503	3300006871	Populus Rhizosphere	HPADTMQDSGRSLVLLSGEHPEPAMVRTEIAALGLTDFLKVTYAKSPRLAAMIRTPRGVATI*
Ga0075424_1027414362	3300006904	Populus Rhizosphere	VIEWADARHPTDGMTDAGLRLAAIAGEHPEPAAVRAPLAILGLSDTLKVTYAKSPRLAAMIRMARGVATL*
Ga0079303_105403932	3300006930	Deep Subsurface	APVTLVQLAGEHPDPAPVRAALAALGLGDVLKVTFATSPRLAAMLRTPRGLVTL*
Ga0105245_106277431	3300009098	Miscanthus Rhizosphere	LPQSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0105247_110412871	3300009101	Switchgrass Rhizosphere	NLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL*
Ga0115027_104340222	3300009131	Wetland	GEHPEPAVVRAELAALGLSDVLKVTYAKSPRLAAMIRTARGVATL*
Ga0105248_125386372	3300009177	Switchgrass Rhizosphere	MAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI*
Ga0105248_125961961	3300009177	Switchgrass Rhizosphere	GEHPEPGAVRADIAALGLSDFLKVTYAKSPRLAAMIRTPRGVATI*
Ga0134064_103074903	3300010325	Grasslands Soil	DRLADCGIRVVTLAGGHPDPAPIRAALIALGLADTLKVTYAQYARLAAMFRTPQGIVTF*
Ga0134121_110858351	3300010401	Terrestrial Soil	LPDSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0151489_15594292	3300011106	Soil	PGPQHPTDRMADSSCRLVAIAGEHPEPAVVRAELATLGLSETMKVTYGKSPRIAAMIRTARGVATL*
Ga0136623_104681582	3300012045	Polar Desert Sand	SGARHPADALDETHLRLIAIAGEHPEPAQIRSALAALGLSETMKVSYGRSPRLAAMIRTARGIATL*
Ga0157319_10554832	3300012497	Arabidopsis Rhizosphere	GVQLVTMAAEHPEPAPVREALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0157326_10588871	3300012513	Arabidopsis Rhizosphere	DSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0137407_120872561	3300012930	Vadose Zone Soil	ETGVRVVALAGEHPDPAPIRAGLAALGLSETLKVTYERHARLAVMLRTPRGLVTL*
Ga0164301_102071222	3300012960	Soil	TGALPESGVQLITLAGEHPEPAPVRDALAGLGLSEMLKVTYGRTPRLAAMLRTPRGVVTL
Ga0164309_119358651	3300012984	Soil	GLSLAALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0157369_100789341	3300013105	Corn Rhizosphere	ALAGEHPEPAPVRAALAALSLSETLKVTYGQSPRLAAMLRSPRGTVTL*
Ga0157369_124937823	3300013105	Corn Rhizosphere	AREHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0157374_121838523	3300013296	Miscanthus Rhizosphere	RLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0157375_101186131	3300013308	Miscanthus Rhizosphere	DARLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL*
Ga0182008_105809361	3300014497	Rhizosphere	GLSLVALAGEHPDPAPVRAAIARLGLADEVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0182021_129634481	3300014502	Fen	NMADSGCRLVAIAGEHPEPAVIRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVATL*
Ga0157376_124064851	3300014969	Miscanthus Rhizosphere	GVQIIALAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0173480_111510142	3300015200	Soil	GRRLVVLAGEHPEPADVREDIGALGLSDVLKVTYAKSPRLAVMIRTPRGVATL*
Ga0132256_1010732732	3300015372	Arabidopsis Rhizosphere	LIALAGEHPDPATIRAALASLGLSETLKVTYGRHPRLAAMLRTPRGIVTL*
Ga0132257_1012192064	3300015373	Arabidopsis Rhizosphere	GEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL*
Ga0132255_1010841942	3300015374	Arabidopsis Rhizosphere	TGRRLAVLAGEHPEPDAVRKEIAALGLSDVLKVTYAKSPRLAAMIRTPRGVATL*
Ga0163161_105576263	3300017792	Switchgrass Rhizosphere	ARLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0184625_102100613	3300018081	Groundwater Sediment	DRMTDTGLRLAAIAGEHPEPAAVRAPLATLGLSDVLKVTYAKSPRLAAMMRTARGVATL
Ga0190271_103809332	3300018481	Soil	PADALPDHGLRLVAIAGEHPEPATVRAALAQLGLSDVLKVTYGRSPRLAAMIRTARGVAT
Ga0173479_100769172	3300019362	Soil	VQLVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL
Ga0173479_104825842	3300019362	Soil	ERRGQGLGAAMLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0193751_11931072	3300019888	Soil	FVTMAGAHPEPAAIRAALGNLGVSDMLKVTYAVTPRLAAMLRTPRGTVTL
Ga0206354_104917702	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VALAGEHPDPAPVRGALTALGLGDTLKVTYGRTPRLAAMLRTPRGTMTL
Ga0207697_103954582	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	DSTRRLVALAGEHPEPALVRTDIAALGLSAILKVTYARSPRLAAMIRTPRGVATL
Ga0207656_101965081	3300025321	Corn Rhizosphere	EHPEPAPVRAAIARLGLADDVKVTYSQSPRLAAMVRTPRGIVTF
Ga0207682_103073131	3300025893	Miscanthus Rhizosphere	MADSGCRLVAIAGEHPEPASVRAELATLGLSDTMKVTYGKSPRIAAMIRTSRGVATL
Ga0207680_110981762	3300025903	Switchgrass Rhizosphere	VALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207699_104380432	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI
Ga0207705_106328293	3300025909	Corn Rhizosphere	TLLDSGLRLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL
Ga0207657_111609841	3300025919	Corn Rhizosphere	LSLVALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207649_102317434	3300025920	Corn Rhizosphere	VVVAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL
Ga0207659_114772461	3300025926	Miscanthus Rhizosphere	AALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0207644_114103812	3300025931	Switchgrass Rhizosphere	DHGLSLVALAGEHPDPAPVRAAIARLGLAEDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207690_115573022	3300025932	Corn Rhizosphere	DLLPDAGLRLVTLAGEHPDPAPVRRALTALGLSETLKVTYGRAPRLAAMLRTPRGTVTL
Ga0207686_100837801	3300025934	Miscanthus Rhizosphere	DSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207669_105859691	3300025937	Miscanthus Rhizosphere	PDSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207711_111476271	3300025941	Switchgrass Rhizosphere	VMAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI
Ga0207689_113771442	3300025942	Miscanthus Rhizosphere	DSSRRLVALAGEHLEPALVRTDIAALGLSEVLKVTYAKSPRLAAMIRTPRGVATL
Ga0207679_106971291	3300025945	Corn Rhizosphere	TMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207651_103858861	3300025960	Switchgrass Rhizosphere	RLAALAGEHPDPAPIRATVAALGLSERLKVTYGQYPRLAAMLRSPRGLVTL
Ga0207668_106272381	3300025972	Switchgrass Rhizosphere	GEHPEPAPVRNALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL
Ga0207640_110559701	3300025981	Corn Rhizosphere	PDHGLSLVALAGEHPDPAPIRAALARLALDEDVKVTFGQSPRLAAMIRTPRGVVTV
Ga0207703_105921223	3300026035	Switchgrass Rhizosphere	RLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0207683_111870132	3300026121	Miscanthus Rhizosphere	QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL
Ga0207683_119089651	3300026121	Miscanthus Rhizosphere	GRRLVVLAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL
Ga0209472_12136403	3300026323	Soil	EHPDPAPIRATLVALGLADTLKVTYAQYARLAAMFRAPQGIVTF
Ga0209998_100062441	3300027717	Arabidopsis Thaliana Rhizosphere	VTLAAEHPDPAPVRAALAALALSDTLKVSYGRTPRLAAMLRTPRGTVTL
Ga0209262_102015851	3300027841	Freshwater	DALPPVPVTLVQLAGEHPDPAPVRAALAALGLGEVLKVTFATSPRLAAMLRTPRGLVTL
Ga0209048_1000509713	3300027902	Freshwater Lake Sediment	AAIAGEHPEPESIRAEIAALGLSDALKVTYAKSPRLAAMIRTPRGTAIL
Ga0268266_118202942	3300028379	Switchgrass Rhizosphere	TRHPTDNLPQSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL
Ga0268266_123138541	3300028379	Switchgrass Rhizosphere	PTDNMADSGCRLVAIAGEHPEPASVRAELAALDLSDTMKVTYGKSPRIAAMIRTSRGVAT
Ga0268264_109809801	3300028381	Switchgrass Rhizosphere	LPDSHIRVATLAGEHPDPAPIRAALAALGLSDELKVTYGRYPRLAAMLRTPRGLVTL
Ga0268264_124491212	3300028381	Switchgrass Rhizosphere	RLPDANLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL
Ga0247828_103773371	3300028587	Soil	TQSGEHPEPGPVRTALAALGLSDTVKVTYGRHPRLAAMIRTPRGLVTL
Ga0247818_113893882	3300028589	Soil	RSIGERHPADALSNAGVQVIALAGEHPEPAQVRAALAALSLSETLKVTYGRSPRLAAMLRTPRGMVTL
Ga0247822_114438322	3300028592	Soil	GVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0302259_10972131	3300028861	Fen	GCRLVAIAGEHPEPAVVRAALAALGLSDTMKVTYGKSPRVAAMVRTSRGVATL
Ga0311347_102580852	3300029923	Fen	CRLVAVAGEHPEPAAVRAELATLGLSDVMKVTYGKSPRIAAMIRTARGVATL
Ga0302286_103039941	3300030047	Fen	VAIAGEHPEPAVVRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVSTL
Ga0311333_100675944	3300030114	Fen	VAIAGEHPEPAVVRTALATLGLSDTLKVTYGKSPRVAAMVRTSRGVATL
(restricted) Ga0255311_11267271	3300031150	Sandy Soil	PDASLRVVALAGEHPEPAPVRAALAALGLSDIVKVTYGRHPRLAAMIRTPRGLVTL
Ga0318573_100639351	3300031564	Soil	DSGVRLVALAGEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0318573_104595942	3300031564	Soil	LRLTALAATHPEPAPVRAALAALGLSEVLKVSYNATPRLAAMIATPRGPVSL
Ga0318543_101693151	3300031777	Soil	LAGEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0308174_110037491	3300031939	Soil	GLRLVALAGEHFEPAPVRAALAALGLSETLKVTYGNAPRLAAMLRTPRGMVTL
Ga0307409_1006580221	3300031995	Rhizosphere	DALADHGLSLVALAGEHPEPAPVRAAIARLGLGDTVKVTYGQSPRLAAMVRTPRGIVTF
Ga0308176_111584461	3300031996	Soil	MPDSGRRLTVLAGEHPEPDLVRKQIAALGLGDTLKVTFAKSPRLAAMIRTPRGIATL
Ga0307416_1009711701	3300032002	Rhizosphere	LAGEHPEPAPVRAAIARLGLGDTVKVTYGQSPRLAAMVRTPRGIVTF
Ga0318514_100322214	3300032066	Soil	GEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0308173_113228162	3300032074	Soil	ALAGEHAEPAPVRAALGELGLSEMLKVTYGRSPRLAAMLRTPRGVVTL
Ga0310889_104647892	3300032179	Soil	LPDASVQMIALAGEHPEPAPVRAALAALSLSETLKVTYGQSPRLAAMLRSPRGTVTL
Ga0335082_100734131	3300032782	Soil	AGEHPEPAAIRASIAALGLSDTLKITYAKSPRLAAMIRTPRGVATL
Ga0310914_111371601	3300033289	Soil	DAMRDECLRLTALAATHPEPAPVRAALAALGLSEVLKVSYNATPRLAAMIATPRGPVSL
Ga0316625_1009493442	3300033418	Soil	PAPVTLVQLAGEHPDPAPVRAALAALGLGDVLKVTFATSPRLAAMLRTPRGLVTL
Ga0316624_114963541	3300033486	Soil	DRLGQSGLSLVALAGEHPEPAPVRKVLEALGLSEILKVSYGRSPRLAAMLRTPRGLVTL
Ga0316624_121842691	3300033486	Soil	VALAGEHPEPAAVRKPLDALGLSEILKVSYGRSPRLAAMLRTPRGLVTL
Ga0370501_0307763_12_185	3300034195	Untreated Peat Soil	MADSSCRLVAIAGEHPEPAVVRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVATL
Ga0373959_0101446_522_680	3300034820	Rhizosphere Soil	MRVVALAGEHPDPAPVRAALAALGLSETLKVTYGRSPRLAAMLRTPRGIVTI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters