Metagenome / Metatranscriptome Family F067227

Overview

Basic Information

• Family ID: F067227
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 126
• Average Sequence Length: 53 residues
• Representative Sequence: QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL
• Number of Associated Samples: 114
• Number of Associated Scaffolds: 126

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 2.38 %
• % of genes near scaffold ends (potentially truncated): 96.83 %
• % of genes from short scaffolds (< 2000 bps): 92.86 %
• Associated GOLD sequencing projects: 103
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (84.127 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.524 % of family members)
• Environment Ontology (ENVO): Unclassified (52.381 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (57.937 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 12.66%
  β-sheet: 22.78%
  Coil/Unstructured: 64.56%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF14031	D-ser_dehydrat	48.41
PF05118	Asp_Arg_Hydrox	3.97
PF08281	Sigma70_r4_2	2.38
PF14342	DUF4396	2.38
PF03401	TctC	1.59
PF01263	Aldose_epim	1.59
PF01650	Peptidase_C13	1.59
PF13468	Glyoxalase_3	0.79
PF00535	Glycos_transf_2	0.79
PF07690	MFS_1	0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	3.97
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	1.59
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	1.59
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.59
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	1.59
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.79

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.13 %
Unclassified	root	N/A	15.87 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.13 %
Unclassified	root	N/A	15.87 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.13 %
Unclassified	root	N/A	15.87 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
Unclassified	root	N/A	15.87 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	31.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %
Unclassified	root	N/A	15.87 %

Level 6

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.79 %
Unclassified	root	N/A	15.87 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	23.02 %

Level 7

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.79 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.79 %
Unclassified	root	N/A	15.87 %

Level 8

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Pseudovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio	0.79 %
Unclassified	root	N/A	15.87 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.79 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Level 9

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.79 %
Unclassified	root	N/A	15.87 %
unclassified Pseudovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio	0.79 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Level 10

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	23.02 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.79 %
Pseudovibrio sp. JE062	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio → Pseudovibrio sp. JE062	0.79 %
Unclassified	root	N/A	15.87 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300031150|Ga0255311_1126727	Not Available	561
3300000891|JGI10214J12806_10013455	All Organisms → cellular organisms → Bacteria	676
3300001213|JGIcombinedJ13530_107071442	Not Available	512
3300001213|JGIcombinedJ13530_108798190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	617
3300001431|F14TB_100049269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506
3300001431|F14TB_109574875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Pseudovibrio → unclassified Pseudovibrio → Pseudovibrio sp. JE062	537
3300005093|Ga0062594_100527988	Not Available	1008
3300005171|Ga0066677_10228593	All Organisms → cellular organisms → Bacteria	1050
3300005280|Ga0065696_1043431	All Organisms → cellular organisms → Bacteria	506
3300005290|Ga0065712_10712660	All Organisms → cellular organisms → Bacteria	542

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.79%
Environmental	Environmental	43.65%
Host-Associated	Host-Associated	55.56%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.56%
Plants	Host-Associated → Plants	55.56%
Terrestrial	Environmental → Terrestrial	38.10%
Wastewater	Engineered → Wastewater	0.79%

Category

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.79%
Freshwater	Environmental → Aquatic → Freshwater	3.17%
Marine	Environmental → Aquatic → Marine	1.59%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.79%
Peat	Environmental → Terrestrial → Peat	3.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.71%
Sediment	Environmental → Aquatic → Sediment	0.79%
Soil	Environmental → Terrestrial → Soil	34.13%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.70%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.79%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Pond	Environmental → Aquatic → Freshwater → Pond	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	3.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.59%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.59%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.79%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.79%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.17%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.59%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_100134552	3300000891	Soil	AGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
JGIcombinedJ13530_1070714421	3300001213	Wetland	LPDHGLRVAAIAGEHPEPAVVRAELAALGLSEVLKVTYAKSPRLAAMIRTARGVATL*
JGIcombinedJ13530_1087981901	3300001213	Wetland	DHGLRVAAIAGEHPEPAVVRAELAALGLSDTLKVTYAKSPRLAAMIRTARGVATL*
F14TB_1000492692	3300001431	Soil	GLRLTAIAGEHPEPAAVRAPLAMLGLSDTLKVTYAKSPRLAAMIRTARGVATL*
F14TB_1095748752	3300001431	Soil	DSGRRLAALAGEHPEPDTVRKEIAALGLTDTLKVTYAKSPRLAAMIRTPRGIATL*
Ga0062594_1005279882	3300005093	Soil	EHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL*
Ga0066677_102285931	3300005171	Soil	ITLAGEHPEPAPIRAALTALGVSDTLKVTYERSPRLAAMLRTPQGIVTL*
Ga0065696_10434312	3300005280	Switchgrass Rhizosphere Bulk Soil	XLPDSGVLFVTMAGEHPEPGAGARALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0065712_107126601	3300005290	Miscanthus Rhizosphere	GEHPEPAPLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0065715_101057531	3300005293	Miscanthus Rhizosphere	PDSGVQLVTMAGEHPEPAPLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0070658_108779073	3300005327	Corn Rhizosphere	TLLDSGLRLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0070676_102613222	3300005328	Miscanthus Rhizosphere	LVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070666_113462121	3300005335	Switchgrass Rhizosphere	VALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0070668_1004958951	3300005347	Switchgrass Rhizosphere	VTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0070669_1013674901	3300005353	Switchgrass Rhizosphere	DLMPDSSRRLVALAGEHLEPALVRTDIAALGLSEVLKVTYAKSPRLAAMIRTPRGVATL*
Ga0070671_1015816541	3300005355	Switchgrass Rhizosphere	SDRLADGGIRLVTLGGEHPDPGRIRAGLASLGLSETLKVSYGRHPRLAAMLRTPRGIVTL
Ga0070671_1017451902	3300005355	Switchgrass Rhizosphere	GEHPDPAPVRAAIARLGLAEDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0070673_1015176532	3300005364	Switchgrass Rhizosphere	MAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070659_1002329873	3300005366	Corn Rhizosphere	QSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0070701_107546971	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	TGLRLAAIAGEHPEPAAVRAPLATLGLSDTLKVTYAKSPRLAAMIRTARGVATL*
Ga0070678_1004660582	3300005456	Miscanthus Rhizosphere	QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0070678_1012663541	3300005456	Miscanthus Rhizosphere	GRRLVVLAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL*
Ga0070664_1008251282	3300005564	Corn Rhizosphere	VQLIALAGEHPEPAQVRAALAALSLSETLKVTYGRSPRLAAMLRTPRGVVAL*
Ga0070702_1017747191	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0068859_1008286414	3300005617	Switchgrass Rhizosphere	DSGRRLVVVAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068864_1021691441	3300005618	Switchgrass Rhizosphere	AMEDSGRRLVLIAGEHPEPDHVRRQIAALGLAATLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068870_109973071	3300005840	Miscanthus Rhizosphere	GRRLVLIAGEHPEPDHVRRQIAALGLAATLKVTYAKSPRIAAMIRTPRGVATL*
Ga0068858_1017018151	3300005842	Switchgrass Rhizosphere	CTLAVMAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI*
Ga0068860_1019730302	3300005843	Switchgrass Rhizosphere	PDANLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL*
Ga0066696_103331433	3300006032	Soil	GIRIVTLAGEHPDPAPIRATLVALGLADTLKVTYAQYARLAAMFRAPQGIVTF*
Ga0075163_120055082	3300006056	Wastewater Effluent	DSGLRLALVAGEHPEPAIVRAELAQLGLSDTMKVTFAKSPRIAAMIRTPRGVATL*
Ga0075521_102655772	3300006642	Arctic Peat Soil	SGLRLAAIAGEHPDPAAVRSELATLGLSETLKVTYAKSPRLAAMIRTPRGVATL*
Ga0079220_100677401	3300006806	Agricultural Soil	LPAAGVHLVALAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI*
Ga0075431_1009573071	3300006847	Populus Rhizosphere	AGEHPDPAPVRAALAALGLSDTLKVTYGRHPRLAAMLRTPRGLITL*
Ga0075433_112705582	3300006852	Populus Rhizosphere	ADALPPAGVHLVALAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI
Ga0075425_1009870132	3300006854	Populus Rhizosphere	LPDSGIRLVALAGEHPDPATIRAALASLQLSDPLKVTYGRHPRLAAMLRTPRGIVTL*
Ga0075434_1004049503	3300006871	Populus Rhizosphere	HPADTMQDSGRSLVLLSGEHPEPAMVRTEIAALGLTDFLKVTYAKSPRLAAMIRTPRGVATI*
Ga0075424_1027414362	3300006904	Populus Rhizosphere	VIEWADARHPTDGMTDAGLRLAAIAGEHPEPAAVRAPLAILGLSDTLKVTYAKSPRLAAMIRMARGVATL*
Ga0079303_105403932	3300006930	Deep Subsurface	APVTLVQLAGEHPDPAPVRAALAALGLGDVLKVTFATSPRLAAMLRTPRGLVTL*
Ga0105245_106277431	3300009098	Miscanthus Rhizosphere	LPQSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL*
Ga0105247_110412871	3300009101	Switchgrass Rhizosphere	NLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL*
Ga0115027_104340222	3300009131	Wetland	GEHPEPAVVRAELAALGLSDVLKVTYAKSPRLAAMIRTARGVATL*
Ga0105248_125386372	3300009177	Switchgrass Rhizosphere	MAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI*
Ga0105248_125961961	3300009177	Switchgrass Rhizosphere	GEHPEPGAVRADIAALGLSDFLKVTYAKSPRLAAMIRTPRGVATI*
Ga0134064_103074903	3300010325	Grasslands Soil	DRLADCGIRVVTLAGGHPDPAPIRAALIALGLADTLKVTYAQYARLAAMFRTPQGIVTF*
Ga0134121_110858351	3300010401	Terrestrial Soil	LPDSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0151489_15594292	3300011106	Soil	PGPQHPTDRMADSSCRLVAIAGEHPEPAVVRAELATLGLSETMKVTYGKSPRIAAMIRTARGVATL*
Ga0136623_104681582	3300012045	Polar Desert Sand	SGARHPADALDETHLRLIAIAGEHPEPAQIRSALAALGLSETMKVSYGRSPRLAAMIRTARGIATL*
Ga0157319_10554832	3300012497	Arabidopsis Rhizosphere	GVQLVTMAAEHPEPAPVREALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0157326_10588871	3300012513	Arabidopsis Rhizosphere	DSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI*
Ga0137407_120872561	3300012930	Vadose Zone Soil	ETGVRVVALAGEHPDPAPIRAGLAALGLSETLKVTYERHARLAVMLRTPRGLVTL*
Ga0164301_102071222	3300012960	Soil	TGALPESGVQLITLAGEHPEPAPVRDALAGLGLSEMLKVTYGRTPRLAAMLRTPRGVVTL
Ga0164309_119358651	3300012984	Soil	GLSLAALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0157369_100789341	3300013105	Corn Rhizosphere	ALAGEHPEPAPVRAALAALSLSETLKVTYGQSPRLAAMLRSPRGTVTL*
Ga0157369_124937823	3300013105	Corn Rhizosphere	AREHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0157374_121838523	3300013296	Miscanthus Rhizosphere	RLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL*
Ga0157375_101186131	3300013308	Miscanthus Rhizosphere	DARLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL*
Ga0182008_105809361	3300014497	Rhizosphere	GLSLVALAGEHPDPAPVRAAIARLGLADEVKVTYGQSPRLAAMVRTPRGIVTF*
Ga0182021_129634481	3300014502	Fen	NMADSGCRLVAIAGEHPEPAVIRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVATL*
Ga0157376_124064851	3300014969	Miscanthus Rhizosphere	GVQIIALAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL*
Ga0173480_111510142	3300015200	Soil	GRRLVVLAGEHPEPADVREDIGALGLSDVLKVTYAKSPRLAVMIRTPRGVATL*
Ga0132256_1010732732	3300015372	Arabidopsis Rhizosphere	LIALAGEHPDPATIRAALASLGLSETLKVTYGRHPRLAAMLRTPRGIVTL*
Ga0132257_1012192064	3300015373	Arabidopsis Rhizosphere	GEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL*
Ga0132255_1010841942	3300015374	Arabidopsis Rhizosphere	TGRRLAVLAGEHPEPDAVRKEIAALGLSDVLKVTYAKSPRLAAMIRTPRGVATL*
Ga0163161_105576263	3300017792	Switchgrass Rhizosphere	ARLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0184625_102100613	3300018081	Groundwater Sediment	DRMTDTGLRLAAIAGEHPEPAAVRAPLATLGLSDVLKVTYAKSPRLAAMMRTARGVATL
Ga0190271_103809332	3300018481	Soil	PADALPDHGLRLVAIAGEHPEPATVRAALAQLGLSDVLKVTYGRSPRLAAMIRTARGVAT
Ga0173479_100769172	3300019362	Soil	VQLVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL
Ga0173479_104825842	3300019362	Soil	ERRGQGLGAAMLREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0193751_11931072	3300019888	Soil	FVTMAGAHPEPAAIRAALGNLGVSDMLKVTYAVTPRLAAMLRTPRGTVTL
Ga0206354_104917702	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VALAGEHPDPAPVRGALTALGLGDTLKVTYGRTPRLAAMLRTPRGTMTL
Ga0207697_103954582	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	DSTRRLVALAGEHPEPALVRTDIAALGLSAILKVTYARSPRLAAMIRTPRGVATL
Ga0207656_101965081	3300025321	Corn Rhizosphere	EHPEPAPVRAAIARLGLADDVKVTYSQSPRLAAMVRTPRGIVTF
Ga0207682_103073131	3300025893	Miscanthus Rhizosphere	MADSGCRLVAIAGEHPEPASVRAELATLGLSDTMKVTYGKSPRIAAMIRTSRGVATL
Ga0207680_110981762	3300025903	Switchgrass Rhizosphere	VALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207699_104380432	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LAGEHPEPALVRAALAALGLSESLKVTYGRSVRLAAMLRTPRGTVTI
Ga0207705_106328293	3300025909	Corn Rhizosphere	TLLDSGLRLTTLAGEHPEPAPVRTALAALGLSEMLKVTYGRVPRLAAMLRSPRGMVTL
Ga0207657_111609841	3300025919	Corn Rhizosphere	LSLVALAGEHPDPAPVRAAIARLGLADDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207649_102317434	3300025920	Corn Rhizosphere	VVVAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRIAAMIRTPRGVATL
Ga0207659_114772461	3300025926	Miscanthus Rhizosphere	AALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0207644_114103812	3300025931	Switchgrass Rhizosphere	DHGLSLVALAGEHPDPAPVRAAIARLGLAEDVKVTYGQSPRLAAMVRTPRGIVTF
Ga0207690_115573022	3300025932	Corn Rhizosphere	DLLPDAGLRLVTLAGEHPDPAPVRRALTALGLSETLKVTYGRAPRLAAMLRTPRGTVTL
Ga0207686_100837801	3300025934	Miscanthus Rhizosphere	DSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207669_105859691	3300025937	Miscanthus Rhizosphere	PDSGVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207711_111476271	3300025941	Switchgrass Rhizosphere	VMAGEHPEPGAVRTEIAALGLSDLLKVTYAKSPRLAAMIRTPRGVATI
Ga0207689_113771442	3300025942	Miscanthus Rhizosphere	DSSRRLVALAGEHLEPALVRTDIAALGLSEVLKVTYAKSPRLAAMIRTPRGVATL
Ga0207679_106971291	3300025945	Corn Rhizosphere	TMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0207651_103858861	3300025960	Switchgrass Rhizosphere	RLAALAGEHPDPAPIRATVAALGLSERLKVTYGQYPRLAAMLRSPRGLVTL
Ga0207668_106272381	3300025972	Switchgrass Rhizosphere	GEHPEPAPVRNALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL
Ga0207640_110559701	3300025981	Corn Rhizosphere	PDHGLSLVALAGEHPDPAPIRAALARLALDEDVKVTFGQSPRLAAMIRTPRGVVTV
Ga0207703_105921223	3300026035	Switchgrass Rhizosphere	RLSLAALAGEHPDPAPVRAALAALGLGDTLKVTYGRHPRLAAMIRTPRGVVTL
Ga0207683_111870132	3300026121	Miscanthus Rhizosphere	QLVTLAGEHPEPAPVRDALAGLGLSETLKVTYGRTPRLAAMLRTPRGVVTL
Ga0207683_119089651	3300026121	Miscanthus Rhizosphere	GRRLVVLAGEHPEPDAVRKEIAALGLADTLKVTYAKSPRLAAMIRTPRGVATL
Ga0209472_12136403	3300026323	Soil	EHPDPAPIRATLVALGLADTLKVTYAQYARLAAMFRAPQGIVTF
Ga0209998_100062441	3300027717	Arabidopsis Thaliana Rhizosphere	VTLAAEHPDPAPVRAALAALALSDTLKVSYGRTPRLAAMLRTPRGTVTL
Ga0209262_102015851	3300027841	Freshwater	DALPPVPVTLVQLAGEHPDPAPVRAALAALGLGEVLKVTFATSPRLAAMLRTPRGLVTL
Ga0209048_1000509713	3300027902	Freshwater Lake Sediment	AAIAGEHPEPESIRAEIAALGLSDALKVTYAKSPRLAAMIRTPRGTAIL
Ga0268266_118202942	3300028379	Switchgrass Rhizosphere	TRHPTDNLPQSGVELVTMAGEHPEPAPIRDALMRLGLTDTLKVTYGRTPRLAAMLRTPRGVITL
Ga0268266_123138541	3300028379	Switchgrass Rhizosphere	PTDNMADSGCRLVAIAGEHPEPASVRAELAALDLSDTMKVTYGKSPRIAAMIRTSRGVAT
Ga0268264_109809801	3300028381	Switchgrass Rhizosphere	LPDSHIRVATLAGEHPDPAPIRAALAALGLSDELKVTYGRYPRLAAMLRTPRGLVTL
Ga0268264_124491212	3300028381	Switchgrass Rhizosphere	RLPDANLRVVALAGEHPEPAPVRSALAALGLSDLLKVTYGRSPRLAAMIRTPRGLVTL
Ga0247828_103773371	3300028587	Soil	TQSGEHPEPGPVRTALAALGLSDTVKVTYGRHPRLAAMIRTPRGLVTL
Ga0247818_113893882	3300028589	Soil	RSIGERHPADALSNAGVQVIALAGEHPEPAQVRAALAALSLSETLKVTYGRSPRLAAMLRTPRGMVTL
Ga0247822_114438322	3300028592	Soil	GVQLVTMAGEHPEPAPVREALAGLGLSDTLKVTYGRTPRLAAMLRTPRGVVTI
Ga0302259_10972131	3300028861	Fen	GCRLVAIAGEHPEPAVVRAALAALGLSDTMKVTYGKSPRVAAMVRTSRGVATL
Ga0311347_102580852	3300029923	Fen	CRLVAVAGEHPEPAAVRAELATLGLSDVMKVTYGKSPRIAAMIRTARGVATL
Ga0302286_103039941	3300030047	Fen	VAIAGEHPEPAVVRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVSTL
Ga0311333_100675944	3300030114	Fen	VAIAGEHPEPAVVRTALATLGLSDTLKVTYGKSPRVAAMVRTSRGVATL
(restricted) Ga0255311_11267271	3300031150	Sandy Soil	PDASLRVVALAGEHPEPAPVRAALAALGLSDIVKVTYGRHPRLAAMIRTPRGLVTL
Ga0318573_100639351	3300031564	Soil	DSGVRLVALAGEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0318573_104595942	3300031564	Soil	LRLTALAATHPEPAPVRAALAALGLSEVLKVSYNATPRLAAMIATPRGPVSL
Ga0318543_101693151	3300031777	Soil	LAGEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0308174_110037491	3300031939	Soil	GLRLVALAGEHFEPAPVRAALAALGLSETLKVTYGNAPRLAAMLRTPRGMVTL
Ga0307409_1006580221	3300031995	Rhizosphere	DALADHGLSLVALAGEHPEPAPVRAAIARLGLGDTVKVTYGQSPRLAAMVRTPRGIVTF
Ga0308176_111584461	3300031996	Soil	MPDSGRRLTVLAGEHPEPDLVRKQIAALGLGDTLKVTFAKSPRLAAMIRTPRGIATL
Ga0307416_1009711701	3300032002	Rhizosphere	LAGEHPEPAPVRAAIARLGLGDTVKVTYGQSPRLAAMVRTPRGIVTF
Ga0318514_100322214	3300032066	Soil	GEHPEPGQIRKAIEALGLSDVLKVSYGRSPRLAAMLRTPRGVVTL
Ga0308173_113228162	3300032074	Soil	ALAGEHAEPAPVRAALGELGLSEMLKVTYGRSPRLAAMLRTPRGVVTL
Ga0310889_104647892	3300032179	Soil	LPDASVQMIALAGEHPEPAPVRAALAALSLSETLKVTYGQSPRLAAMLRSPRGTVTL
Ga0335082_100734131	3300032782	Soil	AGEHPEPAAIRASIAALGLSDTLKITYAKSPRLAAMIRTPRGVATL
Ga0310914_111371601	3300033289	Soil	DAMRDECLRLTALAATHPEPAPVRAALAALGLSEVLKVSYNATPRLAAMIATPRGPVSL
Ga0316625_1009493442	3300033418	Soil	PAPVTLVQLAGEHPDPAPVRAALAALGLGDVLKVTFATSPRLAAMLRTPRGLVTL
Ga0316624_114963541	3300033486	Soil	DRLGQSGLSLVALAGEHPEPAPVRKVLEALGLSEILKVSYGRSPRLAAMLRTPRGLVTL
Ga0316624_121842691	3300033486	Soil	VALAGEHPEPAAVRKPLDALGLSEILKVSYGRSPRLAAMLRTPRGLVTL
Ga0370501_0307763_12_185	3300034195	Untreated Peat Soil	MADSSCRLVAIAGEHPEPAVVRAALATLGLSDTMKVTYGKSPRVAAMVRTSRGVATL
Ga0373959_0101446_522_680	3300034820	Rhizosphere Soil	MRVVALAGEHPDPAPVRAALAALGLSETLKVTYGRSPRLAAMLRTPRGIVTI