Metagenome / Metatranscriptome Family F067160

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067160
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	98 residues
Representative Sequence	YYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Number of Associated Samples	96
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.60 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (34.921 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.78% Coil/Unstructured: 52.22%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF09130	DUF1932	12.70
PF00702	Hydrolase	4.76
PF01022	HTH_5	3.17
PF04961	FTCD_C	2.38
PF03640	Lipoprotein_15	1.59
PF01981	PTH2	1.59
PF03682	UPF0158	1.59
PF00561	Abhydrolase_1	0.79
PF01814	Hemerythrin	0.79
PF01545	Cation_efflux	0.79
PF02861	Clp_N	0.79
PF02574	S-methyl_trans	0.79
PF02452	PemK_toxin	0.79
PF08448	PAS_4	0.79
PF12852	Cupin_6	0.79
PF01590	GAF	0.79
PF00403	HMA	0.79
PF13401	AAA_22	0.79
PF00872	Transposase_mut	0.79
PF00378	ECH_1	0.79
PF00196	GerE	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	12.70
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	2.38
COG1990	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	1.59
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.59
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.79
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.79
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.79
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.79
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.79
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.79
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.79
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.79
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.97 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.38 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.38 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	12.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3.97 %
Chloroflexi bacterium ADurb.Bin222	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2.38 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	12.70 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	3.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.38 %
Chloroflexi bacterium ADurb.Bin222	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.79 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	12.70 %
Hydrogenophaga intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	3.97 %
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	2.38 %
Chloroflexi bacterium ADurb.Bin222	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.79 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Hydrogenophaga intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	3.97 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	2.38 %
Chloroflexi bacterium ADurb.Bin222	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2.38 %
Arthrobacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	1.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Arthrobacter crystallopoietes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter crystallopoietes	0.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Hydrogenophaga intermedia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	3.97 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	2.38 %
Chloroflexi bacterium ADurb.Bin222	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	2.38 %
Arthrobacter deserti	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	1.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.59 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.59 %
Arthrobacter crystallopoietes BAB-32	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter crystallopoietes → Arthrobacter crystallopoietes BAB-32	0.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.79 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.79 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_117368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3178	Open in IMG/M
3300001867\|JGI12627J18819_10143900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300005103\|Ga0066813_1003106	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	762	Open in IMG/M
3300005327\|Ga0070658_10888237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	775	Open in IMG/M
3300005338\|Ga0068868_100067784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter crystallopoietes → Arthrobacter crystallopoietes BAB-32	2840	Open in IMG/M
3300005338\|Ga0068868_101127715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	722	Open in IMG/M
3300005339\|Ga0070660_100044169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	3407	Open in IMG/M
3300005341\|Ga0070691_10602445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	648	Open in IMG/M
3300005345\|Ga0070692_10487247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	796	Open in IMG/M
3300005435\|Ga0070714_100702902	Not Available	975	Open in IMG/M
3300005435\|Ga0070714_100957045	Not Available	832	Open in IMG/M
3300005435\|Ga0070714_101100012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	774	Open in IMG/M
3300005435\|Ga0070714_101933999	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005436\|Ga0070713_100543575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1099	Open in IMG/M
3300005436\|Ga0070713_101828509	Not Available	589	Open in IMG/M
3300005437\|Ga0070710_10403667	Not Available	916	Open in IMG/M
3300005437\|Ga0070710_11017255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300005563\|Ga0068855_100089689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	3549	Open in IMG/M
3300005712\|Ga0070764_10372098	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005843\|Ga0068860_100348243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1457	Open in IMG/M
3300005921\|Ga0070766_10065590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2078	Open in IMG/M
3300006028\|Ga0070717_10590320	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300006028\|Ga0070717_10742304	Not Available	892	Open in IMG/M
3300006028\|Ga0070717_11277535	Not Available	667	Open in IMG/M
3300006059\|Ga0075017_101328805	Not Available	564	Open in IMG/M
3300006163\|Ga0070715_10305618	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006175\|Ga0070712_100462184	Not Available	1058	Open in IMG/M
3300006175\|Ga0070712_100642058	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300006175\|Ga0070712_101596799	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006358\|Ga0068871_101556007	Not Available	625	Open in IMG/M
3300006575\|Ga0074053_11993574	Not Available	511	Open in IMG/M
3300006755\|Ga0079222_10281461	Not Available	1071	Open in IMG/M
3300006854\|Ga0075425_102374107	Not Available	589	Open in IMG/M
3300006953\|Ga0074063_10033216	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1323	Open in IMG/M
3300009092\|Ga0105250_10280003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	717	Open in IMG/M
3300009098\|Ga0105245_10289659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1603	Open in IMG/M
3300009098\|Ga0105245_10660292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300009551\|Ga0105238_10366057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1432	Open in IMG/M
3300009698\|Ga0116216_10174476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300009698\|Ga0116216_10514580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300010048\|Ga0126373_12206936	Not Available	612	Open in IMG/M
3300010371\|Ga0134125_10297510	Not Available	1792	Open in IMG/M
3300010371\|Ga0134125_12226855	Not Available	596	Open in IMG/M
3300010375\|Ga0105239_11374840	Not Available	815	Open in IMG/M
3300010376\|Ga0126381_102942721	Not Available	677	Open in IMG/M
3300010379\|Ga0136449_102389660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300010861\|Ga0126349_1323214	Not Available	519	Open in IMG/M
3300012986\|Ga0164304_11452695	Not Available	565	Open in IMG/M
3300013102\|Ga0157371_11119097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	604	Open in IMG/M
3300013306\|Ga0163162_10512643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1329	Open in IMG/M
3300015372\|Ga0132256_100733278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1104	Open in IMG/M
3300016294\|Ga0182041_12226051	Not Available	512	Open in IMG/M
3300017961\|Ga0187778_10174660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1362	Open in IMG/M
3300017973\|Ga0187780_11069035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300017974\|Ga0187777_10502572	Not Available	847	Open in IMG/M
3300018060\|Ga0187765_11133551	Not Available	545	Open in IMG/M
3300021180\|Ga0210396_10541415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1016	Open in IMG/M
3300021180\|Ga0210396_11251536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300021181\|Ga0210388_11359529	Not Available	598	Open in IMG/M
3300021402\|Ga0210385_10742789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	752	Open in IMG/M
3300021402\|Ga0210385_11210393	Not Available	579	Open in IMG/M
3300021403\|Ga0210397_10846747	All Organisms → cellular organisms → Bacteria → Terrabacteria group	707	Open in IMG/M
3300021403\|Ga0210397_11099812	Not Available	617	Open in IMG/M
3300021405\|Ga0210387_11305645	Not Available	627	Open in IMG/M
3300021407\|Ga0210383_10096387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2486	Open in IMG/M
3300021407\|Ga0210383_10748413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300021407\|Ga0210383_11466736	Not Available	565	Open in IMG/M
3300021433\|Ga0210391_10873689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300021475\|Ga0210392_10122909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1740	Open in IMG/M
3300021475\|Ga0210392_10164347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300021477\|Ga0210398_10662025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	846	Open in IMG/M
3300021478\|Ga0210402_11027218	All Organisms → cellular organisms → Bacteria → Terrabacteria group	751	Open in IMG/M
3300021559\|Ga0210409_10693827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300021560\|Ga0126371_11612885	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300021860\|Ga0213851_1645268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300022467\|Ga0224712_10507765	Not Available	583	Open in IMG/M
3300022532\|Ga0242655_10312808	Not Available	514	Open in IMG/M
3300024331\|Ga0247668_1099583	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300025898\|Ga0207692_10708987	Not Available	653	Open in IMG/M
3300025906\|Ga0207699_11012767	Not Available	614	Open in IMG/M
3300025909\|Ga0207705_10801285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	731	Open in IMG/M
3300025913\|Ga0207695_10959034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	735	Open in IMG/M
3300025914\|Ga0207671_10224356	Not Available	1473	Open in IMG/M
3300025914\|Ga0207671_10312584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1242	Open in IMG/M
3300025917\|Ga0207660_10116324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	2019	Open in IMG/M
3300025924\|Ga0207694_10135198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter deserti	1979	Open in IMG/M
3300025927\|Ga0207687_10466933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300025927\|Ga0207687_11803427	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025928\|Ga0207700_10450516	Not Available	1134	Open in IMG/M
3300025928\|Ga0207700_10785779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	851	Open in IMG/M
3300025929\|Ga0207664_10055306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin222	3148	Open in IMG/M
3300025929\|Ga0207664_10577582	Not Available	1009	Open in IMG/M
3300025929\|Ga0207664_11537394	Not Available	587	Open in IMG/M
3300025939\|Ga0207665_10397946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1048	Open in IMG/M
3300025940\|Ga0207691_10620687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	914	Open in IMG/M
3300025949\|Ga0207667_11530012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	637	Open in IMG/M
3300025972\|Ga0207668_11897929	Not Available	537	Open in IMG/M
3300025981\|Ga0207640_11273113	Not Available	656	Open in IMG/M
3300026494\|Ga0257159_1051873	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300027031\|Ga0208986_1037154	Not Available	529	Open in IMG/M
3300027894\|Ga0209068_10968118	Not Available	505	Open in IMG/M
3300028379\|Ga0268266_11612331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga intermedia	624	Open in IMG/M
3300028381\|Ga0268264_11952195	Not Available	596	Open in IMG/M
3300030494\|Ga0310037_10236092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	798	Open in IMG/M
3300030625\|Ga0210259_10482174	Not Available	628	Open in IMG/M
3300030738\|Ga0265462_12487482	Not Available	516	Open in IMG/M
3300030741\|Ga0265459_14110370	Not Available	511	Open in IMG/M
3300030743\|Ga0265461_13777623	Not Available	515	Open in IMG/M
3300031010\|Ga0265771_1022183	Not Available	559	Open in IMG/M
3300031715\|Ga0307476_11214488	Not Available	552	Open in IMG/M
3300031718\|Ga0307474_11552758	Not Available	520	Open in IMG/M
3300032160\|Ga0311301_10331016	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300032160\|Ga0311301_11643529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300032160\|Ga0311301_11848908	Not Available	715	Open in IMG/M
3300032770\|Ga0335085_10256795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2097	Open in IMG/M
3300032770\|Ga0335085_12071789	Not Available	575	Open in IMG/M
3300032783\|Ga0335079_11389731	Not Available	698	Open in IMG/M
3300032805\|Ga0335078_10553969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1463	Open in IMG/M
3300032828\|Ga0335080_10089931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3405	Open in IMG/M
3300032828\|Ga0335080_10216031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2105	Open in IMG/M
3300032828\|Ga0335080_10597923	Not Available	1160	Open in IMG/M
3300032893\|Ga0335069_10065987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4675	Open in IMG/M
3300033134\|Ga0335073_10344294	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300033134\|Ga0335073_11831205	Not Available	565	Open in IMG/M
3300033158\|Ga0335077_11010990	Not Available	828	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.98%
Host-Associated	Host-Associated	23.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.60%
Plants	Host-Associated → Plants	23.02%
Aquatic	Environmental → Aquatic	2.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.35%
Sediment	Environmental → Aquatic → Sediment	1.59%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.10%
Loam	Environmental → Terrestrial → Soil → Loam	24.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030625	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO122-ANR120SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02108980	2199352024	Soil	SYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY
JGI12627J18819_101439002	3300001867	Forest Soil	GYPVIDFYYYTLGGYSVSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVSLTVASGRPANSSFNVTLWASDGTTTQTESVPVVIQSPCKRHY*
Ga0066813_10031062	3300005103	Soil	GGDSLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070658_108882371	3300005327	Corn Rhizosphere	VPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0068868_1000677841	3300005338	Miscanthus Rhizosphere	GASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0068868_1011277152	3300005338	Miscanthus Rhizosphere	NIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY*
Ga0070660_1000441691	3300005339	Corn Rhizosphere	WSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070691_106024451	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	YGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070692_104872472	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070714_1007029021	3300005435	Agricultural Soil	VPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKALSGLQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070714_1009570451	3300005435	Agricultural Soil	SYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNVTLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070714_1011000122	3300005435	Agricultural Soil	LRHKVKGAESGKSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTATQTETVPVVIQASCKRHY*
Ga0070714_1019339991	3300005435	Agricultural Soil	NGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQGYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070713_1005435752	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070713_1018285091	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKALSGLQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070710_104036671	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070710_110172551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AGTTLIDFYYGTDGIDTVSYTTPPIPAGWSNGTGPVRVVPQPDPSSYTLDAEGYVDVTAAAGLPVNSSFTITLWANDGTTLQTESVPVTIKSSCRRHY*
Ga0068855_1000896891	3300005563	Corn Rhizosphere	SYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070764_103720982	3300005712	Soil	GASGLPAGISVAGTTLIDFYYGTDGIDTLSYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSLNITLWANDGTTKQTETVPVTIMSSCKRHY*
Ga0068860_1003482431	3300005843	Switchgrass Rhizosphere	GGGTNDLAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070766_100655901	3300005921	Soil	YTTPPIPAGWSNGTGPVRLASQPDPSSYTLDAEGYVNVTVASGRAANSSFNITLWANDGTTLQTESVPVTIKSSCKRRY*
Ga0070717_105903201	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070717_107423041	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKALSGLQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0070717_112775351	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYILDAEGYVALKVPSGLQANSSFNVTLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0075017_1013288051	3300006059	Watersheds	NLAIDLNGSWSAPINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYILDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQSPCKRHY*
Ga0070715_103056181	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070712_1004621843	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	WSAPINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSDGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0070712_1006420582	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GGTNDLAIDLNGNWSAPINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTATQTETVPVVIQASCKRHY*
Ga0070712_1015967992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	WSAPINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQGYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0068871_1015560072	3300006358	Miscanthus Rhizosphere	YYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQGYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0074053_119935741	3300006575	Soil	IDLNGNWSAPINIGASGLSAGVSVESTPVTYFYYYTLGGYSLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0079222_102814612	3300006755	Agricultural Soil	VSYGTAPIPAAWSNGTGPVRVVPQPDPQDYTLDAEGYVSLTVASGRPANSSFNVTLWASDGTTTQTESVPVVIQSPCKRHY*
Ga0075425_1023741071	3300006854	Populus Rhizosphere	PGGGTNDLAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0074063_100332163	3300006953	Soil	LGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0105250_102800032	3300009092	Switchgrass Rhizosphere	ASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0105245_102896592	3300009098	Miscanthus Rhizosphere	TLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0105245_106602923	3300009098	Miscanthus Rhizosphere	GDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY*
Ga0105238_103660571	3300009551	Corn Rhizosphere	LNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0116216_101744761	3300009698	Peatlands Soil	INIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSPGLQANSSFNVTLWASDGTTTQTETVPVVIQASCKRHY*
Ga0116216_105145801	3300009698	Peatlands Soil	INIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGLQANSSFNITLWASDGTTTQTESVPVVIKASCKRHY*
Ga0126373_122069361	3300010048	Tropical Forest Soil	PIPAGWSNGTGPVRLASQPDPQSYTLDAEAYVNVTVAAGRAANSSFNITLWANDGTTLQTESVPVTIKSSCKRHY*
Ga0134125_102975101	3300010371	Terrestrial Soil	IPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0134125_122268551	3300010371	Terrestrial Soil	PVPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY*
Ga0105239_113748402	3300010375	Corn Rhizosphere	GDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0126381_1029427212	3300010376	Tropical Forest Soil	VPINIGASGLPAGVSVASTPVIYFYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSPGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0136449_1023896601	3300010379	Peatlands Soil	TTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPVNSSFNITLWANDGTTLQTESVPVTIKSSCKRHY*
Ga0126349_13232141	3300010861	Boreal Forest Soil	DFYYYTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVSSGLQANSSFNITLWASDGTTKQTETVPVVIQASCKRHY*
Ga0164304_114526952	3300012986	Soil	PINIGASGLPGGVSVASTPVIYFYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQYYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQSPCKRHY*
Ga0157371_111190972	3300013102	Corn Rhizosphere	LSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGITKQTETVPVVIQAPCKRHY*
Ga0163162_105126432	3300013306	Switchgrass Rhizosphere	GDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLNAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0132256_1007332781	3300015372	Arabidopsis Rhizosphere	TLSYGNAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY*
Ga0182041_122260512	3300016294	Soil	AGVWVASTPVIDFYYYTLGGYSLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKAPCGLPANSSFNITLWASDGTTTQAETVPVVIQASCKRHY
Ga0187778_101746601	3300017961	Tropical Peatland	GRYTLSYGTPPIPAGWSNGTGPVRLAAQPDPSSYTLDAEGYVGVAVPSGLPANSSFSITLWASDGTTMQAESVPVEIKASCKRRY
Ga0187780_110690351	3300017973	Tropical Peatland	YGTAPIPAGWSNGTGPVRLAAQPDPSSYTLDAEGYADVAVPSGLPASSSFSITLWANDGTTMQTESVPVVIKASCKRRY
Ga0187777_105025721	3300017974	Tropical Peatland	VNFGVSGLPAGLSVAGTPVIDFYYYTLGGYSLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYIVDAEGYVTLAVSSGLQANSSFSITLWASDGTTRQTETVPVVIQASCKRHY
Ga0187765_111335512	3300018060	Tropical Peatland	TAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVTLTASSGLPANSSFNITLWASDGTTKQTETVPVVIQASCKRHY
Ga0210396_105414152	3300021180	Soil	TPINMGVSGLPAGVSFAGTTVIDFYYALDGSGYTVSEGTGAIPAGWSNGTGPVRVVPQPAPQSYTLDAEGYVNVTVASGLQANSSFNITLSANDGTTTQTESVPIQIKASCKRHY
Ga0210396_112515361	3300021180	Soil	GLPSGVSTTGTTIIDFYYALDGSSYTVSYGTGDIPAGWSNGTGPVRVVPQPAPQSYILDAEGYVNVTVPAGRAANSSFTITLSANDGTTTQTESVPVQIKASCKRHY
Ga0210388_113595291	3300021181	Soil	FYYAVDGSSNTLSYGTAPIPAGWSNGTGPVRVAPQPAPQSYTLDAEGYVDVTVPAGLTANSSFTITLSANDGTTTRTESVPVQIKASCKRHY
Ga0210385_107427891	3300021402	Soil	GSWSAPINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVPSGLQANSSFNITLWASDGTTKQTETVPVVIQSPCKRHY
Ga0210385_112103932	3300021402	Soil	DFSYYLDGSYTVAYTTPPIPAGWSNGTGPVRLASQPDPSSYTLDAEGYVNVTVASGRAANSSFNITLWANDGTTLQTESVPVTIKSSCKRRY
Ga0210397_108467472	3300021403	Soil	PAGWSNGTGPVRVVPQPDPSSYTLDAEGYVDVTAAAGLPANSKFTITLWANDGTTKQTETVPVTIMSSCKRHY
Ga0210397_110998121	3300021403	Soil	VPINIGASGLPAGVSVASTPVIDFYYYTLGGYSLSYGTAPVPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFTITLWASDGTT
Ga0210387_113056451	3300021405	Soil	GGTADLEVNLNGSWSTPINVGASGLPAGVSVAGTTIIDFFYALDGSSYTVSYGTGAIPAGWSNGTGPVRVTPQPAPQSYTLDAEGYVDVTVPAGHAANSSFTITLSANDGTTTQTESVPVQIKASCKRHY
Ga0210383_100963871	3300021407	Soil	PAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPVNSSFTITLWANDGTTLQTESVPVTIKSSCRRHY
Ga0210383_107484131	3300021407	Soil	IPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPVNSSFNITLWANDGTTLQTESVPVTIKSSCKRHY
Ga0210383_114667362	3300021407	Soil	SNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSLNITLWANDGTTKQTETVPVTIMSSCKRHY
Ga0210391_108736892	3300021433	Soil	AGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFNITLWANDGTTKQTETVPVTIMSSCKRRY
Ga0210392_101229093	3300021475	Soil	WSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFTITLWASDGTTKQTETVPVVIQSSCKRHY
Ga0210392_101643471	3300021475	Soil	PIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFTITLWANDGTTLQTESVPVTIKSSCKRHY
Ga0210398_106620251	3300021477	Soil	GLSAGISVAGTTLIDFYYGTDGIDTLSYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFHITLWANDGTTLQTESVPVTIMSSCKRRY
Ga0210402_110272181	3300021478	Soil	YSLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFTITLWASDGTTKQTETVPVVIQSSCKRHY
Ga0210409_106938271	3300021559	Soil	SYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFTITLWANDGTTKQTETVPVTIMSSCKRRY
Ga0126371_116128851	3300021560	Tropical Forest Soil	SGGTNNLAIDLNGSWSAPINIGASGLRAGVSVASTPVIDFYYYTLGGYSVSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVTLAVSPGRQANSSFNITLWASDGTTTQTETVPAVIQASCKRHY
Ga0213851_16452681	3300021860	Watersheds	PAGWSNGTGPVRVVPQPDPQNYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0224712_105077651	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	WSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0242655_103128081	3300022532	Soil	SWSTPINIGGSGMPAGLSVAGTTHIDFYYGTDGIDTLSYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFHITLWANDGTTLQAESVPVTIKSSCRRHY
Ga0247668_10995831	3300024331	Soil	PAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207692_107089872	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NGSWSVPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY
Ga0207699_110127671	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PRRGTNDLAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207705_108012851	3300025909	Corn Rhizosphere	SWPVPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207695_109590341	3300025913	Corn Rhizosphere	PTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207671_102243561	3300025914	Corn Rhizosphere	YYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207671_103125841	3300025914	Corn Rhizosphere	TAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207660_101163242	3300025917	Corn Rhizosphere	ASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207662_100168361	3300025918	Switchgrass Rhizosphere	GWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207694_101351982	3300025924	Corn Rhizosphere	LGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207687_104669331	3300025927	Miscanthus Rhizosphere	YGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY
Ga0207687_118034271	3300025927	Miscanthus Rhizosphere	GGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207700_104505161	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ASYGTAPIPAGWSNGTGPVRVVPQPDPQDYILDAEGYVALKVPSGLQANSSFNVTLWASDGTTTQTETVPVVIQAPCKRHY
Ga0207700_107857792	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	APINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207664_100553062	3300025929	Agricultural Soil	LSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207664_105775821	3300025929	Agricultural Soil	GGTNNLAIDLNGSWPVPINIGASGLPAGVSVASTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKALSGLQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207664_115373941	3300025929	Agricultural Soil	YYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETVPVVIQAPCKRHY
Ga0207665_103979461	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VIYFYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVPSGLQANSSFNITLWASDGTTTQTETAPVVIQASCKRHY
Ga0207691_106206871	3300025940	Miscanthus Rhizosphere	SGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0207667_115300121	3300025949	Corn Rhizosphere	GNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY
Ga0207668_118979291	3300025972	Switchgrass Rhizosphere	NNLAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY
Ga0207640_112731131	3300025981	Corn Rhizosphere	DLAIDLNGNWSAPINIGASGLPTGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0257159_10518732	3300026494	Soil	CSNHLAERSDTGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVPSGRQANSSFNITLWASDGTTKQTETVPVVIQSPCKRHY
Ga0208986_10371541	3300027031	Forest Soil	ERPAAGRRDCSNHLAERSDTGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVPSGRQANSSFNITLWASDGTTKQTETVPVVIQSPCKRHY
Ga0209068_109681181	3300027894	Watersheds	VSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVPSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0268266_116123311	3300028379	Switchgrass Rhizosphere	VASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0268264_119521951	3300028381	Switchgrass Rhizosphere	SYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGRQANSSFNITLWASDGTTTQTETVPVVIQASCKRHY
Ga0310037_102360922	3300030494	Peatlands Soil	TPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGLQANSSFNITLWASDGTTTQTESVPVVIKASCKRHY
Ga0210259_104821741	3300030625	Soil	TSGGTNDLEINLNGSWSAPINIGASGLPAGASVAGTTIIDFYYALDGSSYTLSYGTGPIPAGWSNGTGPVRAVPQPAAQSYTLDAEGYVDVTVPSGLQANSSFNITLSANDGTTTQTESVPVQIKTSCKRHY
Ga0265462_124874822	3300030738	Soil	LDGSSYTLSYGTGPIPAGWSNGTGPVRVAPQPAPQSYTLDAEGYVDVTVPAGHAANSSFTITLSANDGTTTQTESVPVQIKASCKRHY
Ga0265459_141103702	3300030741	Soil	DFYYALDGSRYTLSYGTGPIPAGWSNGTGPVRAVPQPAAQSYTLDAEGYVDVTVPSGLQANSSFTITLSANDGATTQTESVPVQIKTSCKRHY
Ga0265461_137776231	3300030743	Soil	DGSYTLSYGTAPIPAGWSNGTGPVRLAAQPDPSVYTLDAEGYVDVAVPSGLPASSSFNINLWANDGTTMQTESVPVVIKASCKRRY
Ga0265771_10221831	3300031010	Soil	GSWSTPINIGATGLVAGITVAGTTLIDYYYGTDGTDTGSYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSFNITLWANDGTTKQTETVTVTIMSSCKRHY
Ga0307476_112144881	3300031715	Hardwood Forest Soil	GWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPANSSLNITLWANDGTTKQTETVPVTIMSSCKRRY
Ga0307474_115527581	3300031718	Hardwood Forest Soil	WSTPINIGASGLPAGVSFAGTTIIDFYYALDGSSYTLSYGTGPIPAGWSNGTGPVRVVPQPAPQSYTLDAEGYVDVTVPAGLQANSSFNITLSANDGATTQTESVPVQIKASCTRHY
Ga0311301_103310164	3300032160	Peatlands Soil	PINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSPGLQANSSFNVTLWASDGTTTQTETVPVVIQASCKRHY
Ga0311301_116435292	3300032160	Peatlands Soil	ISVAGTTLIDFYYGTDGIDTLSYTTPPIPAGWSNGTGPVRVVPQPDPASYTLDAEGYVDVTAAAGLPVNSSFNITLWANDGTTLQTESVPVTIKSSCKRHY
Ga0311301_118489081	3300032160	Peatlands Soil	PINIGASGLPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALAVSSGLQANSSFNITLWASDGTTTQTESVPVVIKASCKRHY
Ga0335085_102567951	3300032770	Soil	MPATNTIGRTCKDRRPRTAPIPAGWSNGTGPVRVVPQPDPQDYVLDAEGYVALAVPSGLQANTSFNITLWASDGTSTQTETVPVVIQAPCKRHY
Ga0335085_120717891	3300032770	Soil	GYSDSYGTAPIPAGWSNGTGPVRVVPQPDPADYTLDAEGYVSVTVASGRPANSSFTITLWASDGTTTQTETVPVVIQSPCKRHY
Ga0335079_113897311	3300032783	Soil	AGVSVAGTPVIYSYYYTLGGYGASYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVSSGLQANSSFNITLWASDGTTTQTETVPVVIQSPCKRHY
Ga0335078_105539693	3300032805	Soil	GPRRSISARPACRRPVPGTTLIDFYYYLDGTDTGFYTTPPVPAGWSNGTGPVRVVPQPDPQSYVLDAEGYVDVTAAAGLPANSSFTITLWANDGTTKQTETVPVTIMSSCKRRY
Ga0335080_100899313	3300032828	Soil	VIDFYYYTLGGYSLSYVTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALKVASDLQANSSFNITFWASDGTTTQTETVPVVIQASCKRHY
Ga0335080_102160313	3300032828	Soil	AGTTLIDFYYGTDGIDTLSYTTPPIPAGWSNGTGPVRVVPQPDPAAYTLDAEGYVDVTAAAGLPVNSSFTITLWANDGTTLQTESVPVTIKSSCRRHY
Ga0335080_105979232	3300032828	Soil	ATTLIYFYYYLDGGYTVSYATAPIPAGWSNGTGPVRLAAQPDPSSYTLDAEGYVDVAVPSGLPAGSSFSITLWASDGTTMQTESVPVVIKTSCKRRY
Ga0335069_100659876	3300032893	Soil	VPINIGASGLPAGVSVAGTPVIDFYYWTLGGDTLSYGTTPIPAGWSNGTGPVRVVPQPDPQDYTLDAGGYVALAVASGLPANSSFNITLWASDGTTKQTETVPVVIQASCKRHY
Ga0335073_103442941	3300033134	Soil	IYPTAPIPAGWSNGTGPVRVVPQPDPADYTLDAEGYVAVTVASGRPANSSFNITLWASDGTTTQTETVPVVIQSPCKRHY
Ga0335073_118312052	3300033134	Soil	SNLAIDLNGSWSTPINIGASGLPAGLSVPGTTLIDFYYYLDGVDTGFYTTPPIPAGWSNGTGPVRVVPQPDPQSYVLDAEGYVDLTAAAGLPANSSFTVTLWANDGTSKQTETVPVTIMSSCKRRY
Ga0335077_110109902	3300033158	Soil	LPAGVSVASTPVIDFYYWTLGGDTLSYGTAPIPAGWSNGTGPVRVVPQPDPQDYTLDAEGYVALTVSSGLQANSSFNITLWASDGTTKQTETVPVVIQAPCKRHY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067160

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences