Metagenome / Metatranscriptome Family F067151

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067151
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	67 residues
Representative Sequence	IYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Number of Associated Samples	116
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	96.83 %
% of genes from short scaffolds (< 2000 bps)	93.65 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.825 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.556 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 66.15% Coil/Unstructured: 33.85%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03193	RsgA_GTPase	44.44
PF07676	PD40	1.59
PF13408	Zn_ribbon_recom	0.79
PF00072	Response_reg	0.79
PF02608	Bmp	0.79
PF03928	HbpS-like	0.79
PF02597	ThiS	0.79
PF00082	Peptidase_S8	0.79
PF00156	Pribosyltran	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	44.44
COG1744	Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupN	Signal transduction mechanisms [T]	0.79
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.79
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.89 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.84 %
Unclassified	root	N/A	3.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.44 %
Unclassified	root	N/A	3.17 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	44.44 %
Unclassified	root	N/A	3.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	44.44 %
Unclassified	root	N/A	3.17 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11068708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300000956\|JGI10216J12902_105771547	All Organisms → cellular organisms → Bacteria → Terrabacteria group	924	Open in IMG/M
3300001664\|P5cmW16_1034860	All Organisms → cellular organisms → Bacteria → Terrabacteria group	917	Open in IMG/M
3300002244\|JGI24742J22300_10031747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300004081\|Ga0063454_100525420	All Organisms → cellular organisms → Bacteria → Terrabacteria group	840	Open in IMG/M
3300004114\|Ga0062593_103392016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300004479\|Ga0062595_102349634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300004643\|Ga0062591_100546497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300004643\|Ga0062591_101543083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300005146\|Ga0066817_1018306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300005166\|Ga0066674_10332019	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005172\|Ga0066683_10130604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300005177\|Ga0066690_10990036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300005178\|Ga0066688_10626666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300005180\|Ga0066685_10899508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005187\|Ga0066675_10299689	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1163	Open in IMG/M
3300005328\|Ga0070676_10453613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300005332\|Ga0066388_101461612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1192	Open in IMG/M
3300005356\|Ga0070674_101248013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300005435\|Ga0070714_100420984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1265	Open in IMG/M
3300005436\|Ga0070713_100694814	All Organisms → cellular organisms → Bacteria → Terrabacteria group	971	Open in IMG/M
3300005439\|Ga0070711_100044005	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300005526\|Ga0073909_10414581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300005546\|Ga0070696_100135604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1794	Open in IMG/M
3300005559\|Ga0066700_10230402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1289	Open in IMG/M
3300005598\|Ga0066706_10906560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300006031\|Ga0066651_10228563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300006163\|Ga0070715_10531929	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300006173\|Ga0070716_101410266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300006606\|Ga0074062_12921831	All Organisms → cellular organisms → Bacteria → Terrabacteria group	947	Open in IMG/M
3300006796\|Ga0066665_11300254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300006797\|Ga0066659_11668809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300006800\|Ga0066660_10218340	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300006806\|Ga0079220_11334979	All Organisms → cellular organisms → Bacteria → Terrabacteria group	603	Open in IMG/M
3300006854\|Ga0075425_101498324	Not Available	762	Open in IMG/M
3300006871\|Ga0075434_100603427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300006881\|Ga0068865_101085483	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300006904\|Ga0075424_102805360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300007258\|Ga0099793_10304396	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300009012\|Ga0066710_103894399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300009088\|Ga0099830_10105472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2110	Open in IMG/M
3300009088\|Ga0099830_10801617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300009088\|Ga0099830_11519760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300009093\|Ga0105240_11167195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	817	Open in IMG/M
3300009094\|Ga0111539_10889613	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1036	Open in IMG/M
3300009098\|Ga0105245_11398052	All Organisms → cellular organisms → Bacteria → Terrabacteria group	750	Open in IMG/M
3300009137\|Ga0066709_101836409	All Organisms → cellular organisms → Bacteria → Terrabacteria group	848	Open in IMG/M
3300009147\|Ga0114129_11037217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300009176\|Ga0105242_12254705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300009176\|Ga0105242_12721667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300009811\|Ga0105084_1048606	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010042\|Ga0126314_10953548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300010045\|Ga0126311_11415422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300010301\|Ga0134070_10397626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300010323\|Ga0134086_10319007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300010326\|Ga0134065_10299741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300010371\|Ga0134125_12702919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010373\|Ga0134128_12620684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300010400\|Ga0134122_10565254	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1043	Open in IMG/M
3300010401\|Ga0134121_12257292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300012198\|Ga0137364_10923111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012199\|Ga0137383_11328883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012201\|Ga0137365_10715107	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300012204\|Ga0137374_10533251	All Organisms → cellular organisms → Bacteria → Terrabacteria group	906	Open in IMG/M
3300012207\|Ga0137381_10348240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300012208\|Ga0137376_11374982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300012209\|Ga0137379_10077714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3192	Open in IMG/M
3300012210\|Ga0137378_11680251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300012350\|Ga0137372_10184577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1680	Open in IMG/M
3300012353\|Ga0137367_11183703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300012362\|Ga0137361_10595207	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1013	Open in IMG/M
3300012363\|Ga0137390_10080266	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300012532\|Ga0137373_10196277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1666	Open in IMG/M
3300012907\|Ga0157283_10225963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300012958\|Ga0164299_11667055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012972\|Ga0134077_10426076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300012984\|Ga0164309_11398459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012989\|Ga0164305_10485434	All Organisms → cellular organisms → Bacteria → Terrabacteria group	968	Open in IMG/M
3300014166\|Ga0134079_10136314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300014829\|Ga0120104_1026147	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1053	Open in IMG/M
3300015357\|Ga0134072_10180156	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300015358\|Ga0134089_10125205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1001	Open in IMG/M
3300017792\|Ga0163161_10763573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300018027\|Ga0184605_10297073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300018051\|Ga0184620_10292139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300018061\|Ga0184619_10050356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1810	Open in IMG/M
3300018071\|Ga0184618_10091815	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1178	Open in IMG/M
3300018081\|Ga0184625_10491878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300018431\|Ga0066655_10329598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300018431\|Ga0066655_11423168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300020010\|Ga0193749_1089973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300020018\|Ga0193721_1123851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300021078\|Ga0210381_10331475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300021560\|Ga0126371_12814402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300025898\|Ga0207692_10183731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1219	Open in IMG/M
3300025905\|Ga0207685_10513672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300025916\|Ga0207663_10804221	All Organisms → cellular organisms → Bacteria → Terrabacteria group	749	Open in IMG/M
3300025928\|Ga0207700_11783423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300025933\|Ga0207706_10374600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300025981\|Ga0207640_10555363	All Organisms → cellular organisms → Bacteria → Terrabacteria group	965	Open in IMG/M
3300025986\|Ga0207658_10970014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300026035\|Ga0207703_10695419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300026326\|Ga0209801_1255103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300026550\|Ga0209474_10558876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300027748\|Ga0209689_1120968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1316	Open in IMG/M
3300027862\|Ga0209701_10584406	Not Available	595	Open in IMG/M
3300028708\|Ga0307295_10000109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16482	Open in IMG/M
3300028708\|Ga0307295_10034280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300028716\|Ga0307311_10094389	All Organisms → cellular organisms → Bacteria → Terrabacteria group	831	Open in IMG/M
3300028722\|Ga0307319_10169966	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300028755\|Ga0307316_10316109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300028771\|Ga0307320_10078268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1241	Open in IMG/M
3300028784\|Ga0307282_10022053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2687	Open in IMG/M
3300028799\|Ga0307284_10040322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1605	Open in IMG/M
3300028799\|Ga0307284_10326615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300028807\|Ga0307305_10054525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1841	Open in IMG/M
3300028811\|Ga0307292_10158883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	916	Open in IMG/M
3300028811\|Ga0307292_10168420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300028814\|Ga0307302_10553006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300028814\|Ga0307302_10648938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300028828\|Ga0307312_10106527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1743	Open in IMG/M
3300028884\|Ga0307308_10428589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300028885\|Ga0307304_10146833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300028885\|Ga0307304_10176518	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.71%
Host-Associated	Host-Associated	14.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.95%
Plants	Host-Associated → Plants	14.29%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.32%
Sediment	Environmental → Aquatic → Sediment	3.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.97%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.63%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_110687083	3300000891	Soil	LESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
JGI10216J12902_1057715473	3300000956	Soil	EPEPKPTTVYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
P5cmW16_10348603	3300001664	Permafrost	AEARAQALPEPEPEPTTVYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
JGI24742J22300_100317471	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	PEPVAVLTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0063454_1005254202	3300004081	Soil	VAEATDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0062593_1033920161	3300004114	Soil	PEPAATPTYRVEVTLESGATLLVAEASDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0062595_1023496342	3300004479	Soil	EVTLESGATLLVAEASDFEYAKEIGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0062591_1005464971	3300004643	Soil	VEVTLESGATLLVAESSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN
Ga0062591_1015430831	3300004643	Soil	PTYRVEVTLESGAVLLVSETSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGLNG*
Ga0066817_10183061	3300005146	Soil	MALAEARPPQVPEPEAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0066674_103320191	3300005166	Soil	EVTLASGATLLVAEATDFEYAKEMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0066683_101306042	3300005172	Soil	VTLASGATLLVAEATDFEYAKSMGMKVIEEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV
Ga0066690_109900361	3300005177	Soil	YRIEVTLDSGTTLLVAEATDFEQAKAIGMRVIDEAEAGGMVAVGDATIDGRQITSVDVLGRNAA*
Ga0066688_106266663	3300005178	Soil	KTIYRVEVTLASGATLLVAEASDFEYAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0066685_108995081	3300005180	Soil	APAATTEPEPKTIYRVEVTLASGATLLVAEASDFEYAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0066675_102996891	3300005187	Soil	ASGATLLVAEASDFEYAKSMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0070676_104536131	3300005328	Miscanthus Rhizosphere	AKTPQAPEPVAVLTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0066388_1014616121	3300005332	Tropical Forest Soil	GPVYRIEVTLESGATLLVAEASDFEEAKAIGMRVIDEAEAGGTVAVGDAAIDGRQIVSVDVLGRNPA*
Ga0070674_1012480133	3300005356	Miscanthus Rhizosphere	TVAPAPAPEPPPTYRVEVTLESGAVLLVSETSDFEEAKAIGMRVIDEAEAGSSVAVGDATIDGRQVVSVDVLGLNG*
Ga0070714_1004209843	3300005435	Agricultural Soil	VAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0070713_1006948141	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LAEAKTPQAPEPVAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0070711_1000440051	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0073909_104145813	3300005526	Surface Soil	VDATPEPKPATIYRVEVTLESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSA*
Ga0070696_1001356041	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IYRVEVTLESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0066700_102304023	3300005559	Soil	TPPEPEPKTIYRVEVTLASGATLLVAEATDFEHAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0066706_109065601	3300005598	Soil	PPEPEPKTIYRVEVTLASGATLLVAEATDFEHAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0066651_102285632	3300006031	Soil	PAAGPVYRVEVTLESGATLLVAEASDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA*
Ga0070715_105319291	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AEARAQVEPEPAATPTYRVEVTLESGATLLVAEASDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA*
Ga0070716_1014102661	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0074062_129218311	3300006606	Soil	TTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0066665_113002541	3300006796	Soil	SYRVEVTLASGATLLVAEASDFEYAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0066659_116688092	3300006797	Soil	PIYRVEVTLESGTTLLVAEATDFEQAKAIGMRVIDEAEAGGMVAVGDATIDGRQVVSVDVLGRSAA*
Ga0066660_102183403	3300006800	Soil	PGAGPVYRIEVTLESGTTLLVAEASDFEQAKAIGMRVIDEAEAGGMVAIGDATIDGRQVVSVDVLGRNS*
Ga0079220_113349791	3300006806	Agricultural Soil	AQGPVYRVEVTLESGATLLVAESSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0075425_1014983242	3300006854	Populus Rhizosphere	TLESGATLLVAEASDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0075434_1006034272	3300006871	Populus Rhizosphere	ATLLVAESSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0068865_1010854831	3300006881	Miscanthus Rhizosphere	SGATLLVTEATDFEYAKQVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSA*
Ga0075424_1028053601	3300006904	Populus Rhizosphere	YRVEVTLDSGATLLVAEASDFEAAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0099793_103043961	3300007258	Vadose Zone Soil	AVAEQEPEPKPIYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSGG*
Ga0066710_1038943993	3300009012	Grasslands Soil	TVLAAEASDFEDAKTIGMRIIDEAEAGGSVTIGDDAVDGREVVSVDVLGRNGE
Ga0099830_101054724	3300009088	Vadose Zone Soil	LASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0099830_108016171	3300009088	Vadose Zone Soil	LLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGV*
Ga0099830_115197601	3300009088	Vadose Zone Soil	GTPPVVEPEPESTTTYRVEVTLANGATLLVAEATDFEHAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0105240_111671951	3300009093	Corn Rhizosphere	KTPQAPEPVAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0111539_108896131	3300009094	Populus Rhizosphere	SGAVLLVTETSDFEAAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGLNG*
Ga0105245_113980522	3300009098	Miscanthus Rhizosphere	VTLESGATLLVAESSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0066709_1018364093	3300009137	Grasslands Soil	GATLLVAEATDFEYAKAMGMRVIDEAEAGGTVAIGDATIDGRQIVSVDVLGRSGE*
Ga0114129_110372173	3300009147	Populus Rhizosphere	TLSSGSTLLVAEAADFEYAKQIGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0105242_122547053	3300009176	Miscanthus Rhizosphere	LAAEAADVETAKTLAMSVYDEAEAGGTVAIGDATIDGRQIVAVDVLQREDG*
Ga0105242_127216671	3300009176	Miscanthus Rhizosphere	PEPKPTTIYRVEVTLESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSA*
Ga0105084_10486063	3300009811	Groundwater Sand	TPQPVAVPTYRVEVTLASGSTLLVAESTDFEHAKSIGMRVIDEAEAGGSVAIGDATIDGRQVVSVDVLGRNAA*
Ga0126314_109535483	3300010042	Serpentine Soil	APAPAPAPERPPTYRVEVTLESGAVLLVSETSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGLNG*
Ga0126311_114154222	3300010045	Serpentine Soil	AVLLVSETSDFEEAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGLNG*
Ga0134070_103976263	3300010301	Grasslands Soil	ASGATLLVAEANDFEYAKSMGMRVIDEAEAGCTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0134086_103190073	3300010323	Grasslands Soil	LASGATLLVAEATNFEYAKSMGMKVIEEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0134065_102997413	3300010326	Grasslands Soil	TPAVAEPEPEPKPIYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSGG*
Ga0134125_127029191	3300010371	Terrestrial Soil	ESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0134128_126206841	3300010373	Terrestrial Soil	SGATLLVAEATDFEYAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGA*
Ga0134126_128205441	3300010396	Terrestrial Soil	YSAPPLEAAPPVPATPAQFRIVVTLESGATFLVAEAHDVEAAKSLGMRVYDEAQAGGTVAIGDATIDGRQIVSIDVLHREDE*
Ga0134122_105652543	3300010400	Terrestrial Soil	TLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0134121_122572921	3300010401	Terrestrial Soil	SGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0137364_109231111	3300012198	Vadose Zone Soil	PTNTYRVEVTLASGSTVLAAEASDFEDAKTIGMRIIDEAEAGGSVTVGGDVIDGREVVSVDVLGRNGE*
Ga0137383_113288831	3300012199	Vadose Zone Soil	IYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRSGG*
Ga0137365_107151073	3300012201	Vadose Zone Soil	VEVTLASGATLLVAEASDFEQAKAIGMRVIDEAEAGGSVAVGDATIDGRQVVSVDVLGRNQ*
Ga0137374_105332511	3300012204	Vadose Zone Soil	QGPMAEPTLEPVPGSTSVYPVEVTLASGPTLLVAEATDFEDAKSIGMRVIDEAEAGGSVAVGDATIDGRQVVSVDVLGRN*
Ga0137381_103482401	3300012207	Vadose Zone Soil	PEPTTVYRVEVTLENGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0137376_113749821	3300012208	Vadose Zone Soil	SGATLLVAEATDFEYAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV*
Ga0137379_100777141	3300012209	Vadose Zone Soil	EALPTSRPAATPVYRVEVTLESGTTLLVAEATDFEQAKTIGMRVIDEAEAGGMVAVGDATIDGRQVVSVDVLGRSA*
Ga0137378_116802512	3300012210	Vadose Zone Soil	EPAPKTVYRVEVRLASGATLLVAEATDFEYAKEMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0137370_104022232	3300012285	Vadose Zone Soil	LAQARAQTLPDPEPEPQTVYRVEVTLESGATLLVAEASDFEEAKAIGMRVIDEAEAGGSVAIGDATIDGRQVVSVDVLGRNGA*
Ga0137372_101845773	3300012350	Vadose Zone Soil	GETLAAPQPEAKPVYRVEVTLASGATLLVAEASDFEYAKSIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRSGE*
Ga0137367_111837031	3300012353	Vadose Zone Soil	AKPVYRVEVTLASGATLLVAEASDFEYAKSIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRSGE*
Ga0137361_105952071	3300012362	Vadose Zone Soil	EPAPKTIYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0137390_100802665	3300012363	Vadose Zone Soil	TIYRVEVTLANGATLLVAEATDFEHAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0137373_101962773	3300012532	Vadose Zone Soil	VYRVEVTLASGSTLLVAEASDFEQAKAIGMRVIDEAEAGGTVAVGDATIAGRQVVSVDVLGRNAA*
Ga0157283_102259633	3300012907	Soil	TTIYRVEVTLESGATLLVAEATDFEYAKHLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0164299_116670552	3300012958	Soil	IYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA*
Ga0134077_104260761	3300012972	Grasslands Soil	AAGPVYRVEVTLESGATLLVAESSDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRN*
Ga0164309_113984593	3300012984	Soil	ATLLAAEAADVETAKTLAMRVYDEAEAGGTVAIGDATIDGRQIVAVDVLQREDG*
Ga0164305_104854343	3300012989	Soil	GATFLAAEAADVETAKTLAMRVYEEAEAGGTVAIGDATIDGRQIVAVDVLQREDG*
Ga0134079_101363141	3300014166	Grasslands Soil	ATLLVAEASDFEEAKTIGMRVIDEAEAGGTVAVGDAAIDGRQVVSVDVLGRNAA*
Ga0120104_10261471	3300014829	Permafrost	LESGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0134072_101801561	3300015357	Grasslands Soil	PRGEALPTPQAAGPVYRIEVTLESGTTLLVAEATDFEQAKAIGMRVIDEAEAGGMVAVGDATIDGRQVVSVDVLGRNAA*
Ga0134089_101252053	3300015358	Grasslands Soil	EPEPKTIYRVEVTLASDATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA*
Ga0163161_107635733	3300017792	Switchgrass Rhizosphere	TLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0184605_102970731	3300018027	Groundwater Sediment	SGSTLLVSETASFEEAKSIGMRVIAEAEAGGSVAIGDATIDGRQVVSVDVLGRNAE
Ga0184620_102921392	3300018051	Groundwater Sediment	ESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0184619_100503563	3300018061	Groundwater Sediment	YRVEVTLESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDAAIDGRQVVSVDVLGRNAA
Ga0184618_100918151	3300018071	Groundwater Sediment	PKTIYRVEVTLASGTTLLVAEATDFEYAKQLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGG
Ga0184625_104918783	3300018081	Groundwater Sediment	PAVVEPEPAPKTIYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNDA
Ga0066655_103295981	3300018431	Grasslands Soil	SGATLLVAEADDFGYAKSMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV
Ga0066655_114231682	3300018431	Grasslands Soil	PPEPKTIYRVEVTLASGATLLVAEATDFEYAKQLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA
Ga0193749_10899731	3300020010	Soil	EPRPTTIYRVEVTLESGATLLVAEATDFEYAKQVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0193721_11238513	3300020018	Soil	EVTLASGATLLVAEATDFEYAKQLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNS
Ga0210381_103314751	3300021078	Groundwater Sediment	LAQMGAEAPPEPKPTTIYRVEVTLESGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0126371_128144022	3300021560	Tropical Forest Soil	ATLLVSETSDFEEAKAIGMRIIDEAEAGGTVAVGDATIDGRQVVSVDVLGRSAA
Ga0207692_101837311	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PQAPEPVAVLTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0207685_105136723	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ASGATLLVAEATDFEYAKEVGMRVIEEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA
Ga0207663_108042212	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LAEARAQAAPAAPAAGPVYRVEVTLESGATLLVAESSDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0207700_117834231	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAEAKTPQAPEPVAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0207706_103746003	3300025933	Corn Rhizosphere	PQVPEPEAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0207640_105553631	3300025981	Corn Rhizosphere	AAGPVYRVEVTLDSGATLLVAEASDFEEAKTIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0207658_109700141	3300025986	Switchgrass Rhizosphere	VPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0207703_106954191	3300026035	Switchgrass Rhizosphere	GATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0209801_12551033	3300026326	Soil	AEATTPAPPEPKTIYRVEVTLASGATLLVAEATDFEYAKQLGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA
Ga0209474_105588762	3300026550	Soil	MPTRGETLPTPQPAATPVYRVEVTLASGTTLLVAEATDFEQAKTIGMRVIDEAEAGGMVAVGDATIDGRQVVSVDVLGRNA
Ga0209689_11209683	3300027748	Soil	PGAVTPPEPEPKTIYRVEVTLASGATLLVAEATDFEHAKAMGMRVIDEAEAGGTVAVGDATIDGRQIVSVDVLGRNGV
Ga0209701_105844062	3300027862	Vadose Zone Soil	LLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGV
Ga0307295_100001091	3300028708	Soil	EAVPTTIYRVEVTLASGATLLVAEATDFEYAKEVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA
Ga0307295_100342803	3300028708	Soil	TLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNDA
Ga0307311_100943891	3300028716	Soil	TYRVEVTLASGSTLLVSETASFEEAKSIGMRVIAEAEAGGSVAIGDATIDGRQVVSVDVLGRNAE
Ga0307319_101699661	3300028722	Soil	LASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0307316_103161091	3300028755	Soil	EAPPEPKPTTTYRVEVTLESGATLLVAEVADFEYAKQVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0307320_100782681	3300028771	Soil	AAGPVYRVEVTLESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0307282_100220531	3300028784	Soil	ARAVLEPEPKPTTVYRVEVTLASGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0307284_100403221	3300028799	Soil	MAPAQARAQALPDPEPEPQTVYRVEVTLESGATLLVAEATDFEYAKQMGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNGA
Ga0307284_103266152	3300028799	Soil	YRVEVTLTSGSTLLVAEASDFEQAKAIGMRVIDEAEAGGTVAVGDAAIDGRQVVSVDVLGRNAA
Ga0307305_100545254	3300028807	Soil	KPTTIYRVEVTLESGATLLVEEATDFEYAKQVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0307292_101588831	3300028811	Soil	LESGATLLVAEATDFEYAKQIGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA
Ga0307292_101684202	3300028811	Soil	AGPVYRVEVTLESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0307302_105530061	3300028814	Soil	PTYRVEVTLASGSTLLVSETASFEEAKSIGMRVIAEAEAGGSVAIGDATIDGRQVVSVDVLGRNAE
Ga0307302_106489381	3300028814	Soil	YRVEVTLESGATLLVAEASDFEEAKSIGMRVIDEAEAGGSVAVGDATIDGRQVVSVDVLGLNGE
Ga0307312_101065271	3300028828	Soil	LPTPQPAAGPIYRVEVTLESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0307308_104285891	3300028884	Soil	SGSTLLVAESSSFEEAKSVGMRVIAEAEAGGSVAIGDATIDGRQVVSVDVLGRNA
Ga0307304_101468332	3300028885	Soil	VEVTLESGSTLLVAEATDFEQAKAIGMRVIDEAEAGGTVAVGDATIDGRQVVSVDVLGRNAA
Ga0307304_101765181	3300028885	Soil	LAQVGAEAPPEPKPTTTYRVEVTLESGATLLVAEVADFEYAKQVGMRVIDEAEAGGTVAIGDATIDGRQVVSVDVLGRNSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067151

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences