Metagenome / Metatranscriptome Family F067149

Basic Information
Family ID	F067149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	54 residues
Representative Sequence	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTARILNAI
Number of Associated Samples	115
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.37 %
% of genes near scaffold ends (potentially truncated)	38.10 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (80.159 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (7.143 % of family members)
Environment Ontology (ENVO)	Unclassified (22.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.651 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 70.91% β-sheet: 0.00% Coil/Unstructured: 29.09%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13545	HTH_Crp_2	36.51
PF00563	EAL	18.25
PF00027	cNMP_binding	7.94
PF01464	SLT	3.17
PF03264	Cytochrom_NNT	1.59
PF00990	GGDEF	1.59
PF13426	PAS_9	1.59
PF12860	PAS_7	1.59
PF00188	CAP	1.59
PF08448	PAS_4	0.79
PF06863	DUF1254	0.79
PF03330	DPBB_1	0.79
PF00111	Fer2	0.79
PF08479	POTRA_2	0.79
PF02195	ParBc	0.79
PF01510	Amidase_2	0.79
PF01243	Putative_PNPOx	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	18.25
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	18.25
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	18.25
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	18.25
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.59
COG3005	Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductase	Energy production and conversion [C]	1.59
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.16 %
Unclassified	root	N/A	19.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.16 %
Unclassified	root	N/A	19.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.16 %
Unclassified	root	N/A	19.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.60 %
Unclassified	root	N/A	19.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.59 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	73.02 %
Unclassified	root	N/A	19.84 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.30 %
Unclassified	root	N/A	19.84 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.84 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	8.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.17 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.79 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.84 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	8.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.38 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.79 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.84 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	8.73 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.79 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.79 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.84 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	8.73 %
Bosea sp. Root483D1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. Root483D1	0.79 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.79 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02GNU9W	Not Available	661	Open in IMG/M
2228664021\|ICCgaii200_c0726328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101342112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300000789\|JGI1027J11758_11559066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	559	Open in IMG/M
3300001213\|JGIcombinedJ13530_101556157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	973	Open in IMG/M
3300002076\|JGI24749J21850_1001878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2970	Open in IMG/M
3300003324\|soilH2_10284091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2458	Open in IMG/M
3300003347\|JGI26128J50194_1010373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300003349\|JGI26129J50193_1011773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300003911\|JGI25405J52794_10036501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300004058\|Ga0055498_10001472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2179	Open in IMG/M
3300004463\|Ga0063356_100834438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300004479\|Ga0062595_100559246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300005103\|Ga0066813_1002373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	809	Open in IMG/M
3300005164\|Ga0066815_10001173	Not Available	2100	Open in IMG/M
3300005165\|Ga0066869_10008516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1351	Open in IMG/M
3300005204\|Ga0068997_10028232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300005290\|Ga0065712_10000921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8311	Open in IMG/M
3300005330\|Ga0070690_100244536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1266	Open in IMG/M
3300005332\|Ga0066388_100412317	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300005332\|Ga0066388_101141949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300005332\|Ga0066388_101707713	Not Available	1114	Open in IMG/M
3300005332\|Ga0066388_105624345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	634	Open in IMG/M
3300005336\|Ga0070680_100761830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300005337\|Ga0070682_100021045	All Organisms → cellular organisms → Bacteria	3844	Open in IMG/M
3300005337\|Ga0070682_101161121	Not Available	650	Open in IMG/M
3300005406\|Ga0070703_10001975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6006	Open in IMG/M
3300005434\|Ga0070709_10034780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3058	Open in IMG/M
3300005436\|Ga0070713_100602584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1044	Open in IMG/M
3300005436\|Ga0070713_101333163	Not Available	696	Open in IMG/M
3300005437\|Ga0070710_10003875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7080	Open in IMG/M
3300005466\|Ga0070685_10404990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	946	Open in IMG/M
3300005467\|Ga0070706_100382966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300005518\|Ga0070699_100146756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2085	Open in IMG/M
3300005529\|Ga0070741_10014170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13860	Open in IMG/M
3300005530\|Ga0070679_101310092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300005535\|Ga0070684_101288073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300005614\|Ga0068856_100670367	Not Available	1058	Open in IMG/M
3300005764\|Ga0066903_105515239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300006038\|Ga0075365_10978546	Not Available	596	Open in IMG/M
3300006050\|Ga0075028_100347436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300006057\|Ga0075026_100122625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300006163\|Ga0070715_10628132	Not Available	633	Open in IMG/M
3300006172\|Ga0075018_10554051	Not Available	606	Open in IMG/M
3300006175\|Ga0070712_100205282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300006755\|Ga0079222_10283121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300006755\|Ga0079222_10338609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1008	Open in IMG/M
3300006804\|Ga0079221_10137424	Not Available	1260	Open in IMG/M
3300006804\|Ga0079221_11278803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	575	Open in IMG/M
3300006903\|Ga0075426_10268607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1244	Open in IMG/M
3300006953\|Ga0074063_13188115	Not Available	697	Open in IMG/M
3300006954\|Ga0079219_10746967	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009094\|Ga0111539_10078628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3880	Open in IMG/M
3300010047\|Ga0126382_11019375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300010358\|Ga0126370_10034857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. Root483D1	3072	Open in IMG/M
3300010362\|Ga0126377_10006719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8666	Open in IMG/M
3300010371\|Ga0134125_11162458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	844	Open in IMG/M
3300010373\|Ga0134128_10004019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18016	Open in IMG/M
3300010396\|Ga0134126_11107475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300010396\|Ga0134126_11149597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300010401\|Ga0134121_11484806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	692	Open in IMG/M
3300011271\|Ga0137393_11287295	Not Available	619	Open in IMG/M
3300012494\|Ga0157341_1001807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1341	Open in IMG/M
3300012496\|Ga0157353_1045894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	517	Open in IMG/M
3300012507\|Ga0157342_1079928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	512	Open in IMG/M
3300012509\|Ga0157334_1023460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300012891\|Ga0157305_10010193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1480	Open in IMG/M
3300012931\|Ga0153915_11283956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	855	Open in IMG/M
3300012986\|Ga0164304_10351092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1030	Open in IMG/M
3300013296\|Ga0157374_11131425	Not Available	804	Open in IMG/M
3300014299\|Ga0075303_1029205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300015373\|Ga0132257_102194733	Not Available	714	Open in IMG/M
3300015373\|Ga0132257_103537061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300017927\|Ga0187824_10018776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2029	Open in IMG/M
3300017947\|Ga0187785_10113598	Not Available	1098	Open in IMG/M
3300017947\|Ga0187785_10581240	Not Available	572	Open in IMG/M
3300017974\|Ga0187777_11353204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300017993\|Ga0187823_10186713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300017994\|Ga0187822_10026932	Not Available	1506	Open in IMG/M
3300018032\|Ga0187788_10000906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8465	Open in IMG/M
3300018465\|Ga0190269_11247284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	589	Open in IMG/M
3300019356\|Ga0173481_10000472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8654	Open in IMG/M
3300019362\|Ga0173479_10015203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2087	Open in IMG/M
3300022889\|Ga0247785_1007156	All Organisms → cellular organisms → Bacteria → Proteobacteria	1116	Open in IMG/M
3300022893\|Ga0247787_1004430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1573	Open in IMG/M
3300022898\|Ga0247745_1001551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3044	Open in IMG/M
3300022899\|Ga0247795_1002083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3336	Open in IMG/M
3300023266\|Ga0247789_1098902	Not Available	579	Open in IMG/M
3300025549\|Ga0210094_1031169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300025735\|Ga0207713_1075873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300025914\|Ga0207671_11137114	Not Available	612	Open in IMG/M
3300026304\|Ga0209240_1051126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1557	Open in IMG/M
3300026464\|Ga0256814_1005620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300026748\|Ga0207575_100118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1344	Open in IMG/M
3300026767\|Ga0207469_100730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300026770\|Ga0207537_102145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300026792\|Ga0207499_101500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	729	Open in IMG/M
3300026873\|Ga0207620_1007700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300026929\|Ga0207461_1006280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300027288\|Ga0208525_1007626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1158	Open in IMG/M
3300027310\|Ga0207983_1046570	Not Available	563	Open in IMG/M
3300027364\|Ga0209967_1016036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300027401\|Ga0208637_1004864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1226	Open in IMG/M
3300027448\|Ga0207446_101258	Not Available	583	Open in IMG/M
3300027775\|Ga0209177_10177718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300028802\|Ga0307503_10872925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	519	Open in IMG/M
3300031057\|Ga0170834_100987642	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300031231\|Ga0170824_118253619	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300031241\|Ga0265325_10000117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	54546	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1001712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5064	Open in IMG/M
3300031366\|Ga0307506_10237955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300031446\|Ga0170820_16158738	Not Available	560	Open in IMG/M
3300031740\|Ga0307468_100009366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	3728	Open in IMG/M
3300032012\|Ga0310902_10000391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12141	Open in IMG/M
3300032013\|Ga0310906_10000941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8326	Open in IMG/M
3300032174\|Ga0307470_10188312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1306	Open in IMG/M
3300032179\|Ga0310889_10011245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2898	Open in IMG/M
3300032180\|Ga0307471_103594345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300032180\|Ga0307471_104007518	Not Available	520	Open in IMG/M
3300032205\|Ga0307472_100904198	Not Available	818	Open in IMG/M
3300032782\|Ga0335082_10047793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4443	Open in IMG/M
3300033004\|Ga0335084_10255050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1817	Open in IMG/M
3300033412\|Ga0310810_10009313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11340	Open in IMG/M
3300033433\|Ga0326726_10303442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1498	Open in IMG/M
3300033486\|Ga0316624_11331344	Not Available	656	Open in IMG/M
3300033513\|Ga0316628_100066695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3847	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.13%
Host-Associated	Host-Associated	15.08%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.60%
Plants	Host-Associated → Plants	15.08%
Aquatic	Environmental → Aquatic	9.52%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.76%
Freshwater	Environmental → Aquatic → Freshwater	3.97%
Marine	Environmental → Aquatic → Marine	3.17%
Sediment	Environmental → Aquatic → Sediment	2.38%
Peat	Environmental → Terrestrial → Peat	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.21%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.97%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.38%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	15.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.97%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.17%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300026748	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026767	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A1-11 (SPAdes)	Environmental	Open in IMG/M
3300026770	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06K1-12 (SPAdes)	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026873	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-12 (SPAdes)	Environmental	Open in IMG/M
3300026929	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027448	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G08K5-12 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_02788510	2170459015	Switchgrass, Maize And Mischanthus Litter	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI
ICCgaii200_07263282	2228664021	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTSLASLVVSPHTIGGLTARXLNAI
INPhiseqgaiiFebDRAFT_1013421122	3300000364	Soil	MRKTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLSAI*
JGI1027J11758_115590661	3300000789	Soil	KTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLSAI*
JGIcombinedJ13530_1015561573	3300001213	Wetland	MRKTIILAVATMFLASASVVTGIIRTVDGPIGNTTLASLVVGPHAIGSLTARIFKSI*
JGI24749J21850_10018782	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAAATXLLACVTVVTGVARTIEGPSXNLASLVVSPHTIGGLTARILNAI*
soilH2_102840912	3300003324	Sugarcane Root And Bulk Soil	MRKTIILAAATMLLACATVVTGLARTIEGPTATTTLASLVVSPHTIGGLTAKILNAI*
JGI26128J50194_10103732	3300003347	Arabidopsis Thaliana Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVS
JGI26129J50193_10117732	3300003349	Arabidopsis Thaliana Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI*
JGI25405J52794_100365012	3300003911	Tabebuia Heterophylla Rhizosphere	MRKTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLNAI*
Ga0055498_100014723	3300004058	Natural And Restored Wetlands	MRKTIILAAATLLLACVTMVTGVARTIEGPSTTLASLVVSPHTIGGLTARILNAI*
Ga0063356_1008344383	3300004463	Arabidopsis Thaliana Rhizosphere	MRKTIILAAATLFLACVTVVTGVVRTIEGPSTTLASLVVSPHTIGGLTARI
Ga0062595_1005592461	3300004479	Soil	MRKTIILAAATLFLASVTVVTGVARTIERPIANTTLASLVDRPHT
Ga0066813_10023732	3300005103	Soil	MRKTVILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTMGGLTARILNAI*
Ga0066815_100011731	3300005164	Soil	MRKTIVLAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI*
Ga0066869_100085163	3300005165	Soil	MRKTIILATATLFLACVTVVTGIARTVEGPNTTLAGLMVYPHPIGSLTARIWNAI*
Ga0068997_100282322	3300005204	Natural And Restored Wetlands	MRKTIILAAATLLLACVTMVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI*
Ga0065712_1000092113	3300005290	Miscanthus Rhizosphere	MRKTIILAAATXLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI*
Ga0070690_1002445363	3300005330	Switchgrass Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARI
Ga0066388_1004123172	3300005332	Tropical Forest Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGSLTARLLNAI*
Ga0066388_1011419491	3300005332	Tropical Forest Soil	MRKTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTAR
Ga0066388_1017077132	3300005332	Tropical Forest Soil	MRKTIILAAATLLLACVTVMTGVARTIEGPSTTLASLVVSPHTIGSLTARLLNAI*
Ga0066388_1056243452	3300005332	Tropical Forest Soil	LLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLNAI*
Ga0070680_1007618301	3300005336	Corn Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTSLASLVVSPHTIGGLTAR
Ga0070682_1000210453	3300005337	Corn Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTAKILNAI*
Ga0070682_1011611211	3300005337	Corn Rhizosphere	GARLLPHHSGPTTMRKTIILAAATLLLACATVVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI*
Ga0070703_100019752	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI*
Ga0070709_100347802	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAIATMFLASASVATGIIRSVDGPIDNATLASLVVGPHAIGSLTARIFKSI*
Ga0070713_1006025842	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAIATMFLASASVVTGVIRTVDGPIGNTTLASLVVGPHAIGSLTARLFKSI*
Ga0070713_1013331632	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ILAIATMFLASASVATGIIRAVDGPISNTTLASLVVGPHAIGSLTARIFKSI*
Ga0070710_100038753	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAIATMFLASASVATGIIRAVDGPISNTTLASLVVGPHAIGSLTARLFKSI*
Ga0070685_104049902	3300005466	Switchgrass Rhizosphere	MRKTIILAAATLLLACATVVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI*
Ga0070706_1003829663	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPH
Ga0070699_1001467563	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARLLNAI*
Ga0070741_100141709	3300005529	Surface Soil	MRKTIILAASTMFLACVTVVTGLARSIEGPATDTTLASLVVSPHTIGSLTARILNAI*
Ga0070679_1013100922	3300005530	Corn Rhizosphere	MRKTIILAAATLFLASVTVVTGVARTIERPIANTTLASLVDRPHTIGSLTARILNAI*
Ga0070684_1012880732	3300005535	Corn Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGG
Ga0068856_1006703672	3300005614	Corn Rhizosphere	TTMRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTAKILNAI*
Ga0066903_1055152392	3300005764	Tropical Forest Soil	MRKTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARL
Ga0075365_109785461	3300006038	Populus Endosphere	MRKTIILATATLLLACVTVVTGVARTIEGPSTSLASLVVSPHTIGGLTAKILNAI*
Ga0075028_1003474363	3300006050	Watersheds	ATMFLASASVVTGIVRTVDGSIGTTTLASLVVGPHAIGSLTARIFNPI*
Ga0075026_1001226251	3300006057	Watersheds	MRKTIILAVATMFLASASVVTGIIRTVDGPSGNTTLASLVVGPHTIGSLTARIFNAI*
Ga0070715_106281322	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAIATMFLASASVVTGVIRTVDGPIGNTTLASLVVGPHAIGSLTARIFKSI*
Ga0075018_105540512	3300006172	Watersheds	MRKTIVLAIVTMFLASASVVTGVVRTVEGPDSNTILASLMVHPHTIGSLTARIFNAI*
Ga0070712_1002052823	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKTIILAIATMFLASASVATGIIRAVDGPISNTTLASLVVGPHAIGSLTARIFKSI*
Ga0079222_102831212	3300006755	Agricultural Soil	MRTTIILAAATLLLACATVVTGVARTFEGPSTTLASLVVSPHTIGGLTARILNAI*
Ga0079222_103386092	3300006755	Agricultural Soil	MRKTIILAAATLFLACVTVVTGVARTIERPIANTTLASLVDRPHTIGSLTARILNAI*
Ga0079221_101374242	3300006804	Agricultural Soil	GEGDPIVSVIGSALLPHSSGSTTMRKTIILAAATMILACAAVVTGVARTIERPATDTTLASLVDRPHTIGSPTARILNAI*
Ga0079221_112788031	3300006804	Agricultural Soil	LFLACVTVVTGVARTIERPIANTTLASLVDRPHTIGSLTARILNAI*
Ga0075426_102686073	3300006903	Populus Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTAR
Ga0074063_131881152	3300006953	Soil	ATLFLACVTVVTGIARTVEGPNTTLAGLMVHPHPIGSLTARIWNAI*
Ga0079219_107469671	3300006954	Agricultural Soil	PTTMRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGSLTARLLNAI*
Ga0111539_100786285	3300009094	Populus Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI*
Ga0126382_110193752	3300010047	Tropical Forest Soil	MRKTIILAAATLLLACATVVTGIARNIEGPSTNLASLVV
Ga0126370_100348572	3300010358	Tropical Forest Soil	PSHSGLTIMRKTIILAAATMFLASASVVTGVIRTVDGPIGNTTLASLVVGPHAIGSLTARIFKSI*
Ga0126377_100067196	3300010362	Tropical Forest Soil	TLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLNAI*
Ga0134125_111624582	3300010371	Terrestrial Soil	MRKTIILAAATLFLACVTVVTGVVRTIEGPSTTLASLVVSPHTIGGLTARILNAI*
Ga0134128_1000401921	3300010373	Terrestrial Soil	MRKTIILAAATLFLACVTIVTGVARTIEGPIANTTLASLVDGPHTIGSLTVRILNAI*
Ga0134126_111074752	3300010396	Terrestrial Soil	MRTSIILAAATMILACATVVTGIARTIERPATHTTLASLVDRPHTIGSPTARILNAI*
Ga0134126_111495972	3300010396	Terrestrial Soil	MRKTIILAAATLFLACVTVVTGVARTIERPIANTTLACLVDRPHTIGSLTARILNAI*
Ga0134121_114848061	3300010401	Terrestrial Soil	MRKTIILAAATLFLACVTIVTGVARTIEGPIANTTLASLVDGPHTIGSLTVRILDAI*
Ga0137393_112872951	3300011271	Vadose Zone Soil	LATAALFLACVTVVAGVARTVEGPNTTLASLMVYPHSIGSLTARILNAI*
Ga0157341_10018072	3300012494	Arabidopsis Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTVEGPSTTLASLVVSPHTIGGLTARILNAI*
Ga0157353_10458942	3300012496	Unplanted Soil	RKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI*
Ga0157342_10799281	3300012507	Arabidopsis Rhizosphere	LLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI*
Ga0157334_10234602	3300012509	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLAS
Ga0157305_100101932	3300012891	Soil	MRKTIILAAATLFLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI*
Ga0153915_112839561	3300012931	Freshwater Wetlands	MRKTIILAVATMFLASASVVTGVVRTVEGPNGNTILASLVVSPHTIGSLTARIFKPI*
Ga0164304_103510923	3300012986	Soil	MRKTIILAIATMFLASASVVTGIIRTVDGPIGNTTLASLVVGPHAIGSLTARLFKSI*
Ga0157374_111314251	3300013296	Miscanthus Rhizosphere	VRKTIILAIATMFLASASVATGIIRSVDGPIDNATLASLVVGPHAIGSLTARIFKSI*
Ga0075303_10292052	3300014299	Natural And Restored Wetlands	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTARILNAI*
Ga0132257_1021947332	3300015373	Arabidopsis Rhizosphere	AATLLLACATVVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI*
Ga0132257_1035370611	3300015373	Arabidopsis Rhizosphere	MRKTVILAAATLLLACVTVVTGVARTIEGPSTNLASLVVS
Ga0187824_100187762	3300017927	Freshwater Sediment	MRKTIILAAATLFLACVTVVTGVARTIERPIANTTLASLVDRPHTIGSLTARILNAI
Ga0187785_101135981	3300017947	Tropical Peatland	MRKTIILAIATLFLASASVVTGVIRTVDGPIGNTTLASLVVGPHAIGSLTARIFKSI
Ga0187785_105812402	3300017947	Tropical Peatland	MRKTIVLAIATMFLASASVVAGIIRTVDGPNGNTVLASLVVGPHAIGSLTARLFKSI
Ga0187777_113532042	3300017974	Tropical Peatland	MRKTIILATAAMFLASASVVTGIIRTVDGPIGNTTLASLVVGPHAIGSLTVRLFKSI
Ga0187823_101867132	3300017993	Freshwater Sediment	MRKTIILAAATLFLACVTVVTGVARTIEGPIANTTLASLVDRPHTISSLTARILNAI
Ga0187822_100269322	3300017994	Freshwater Sediment	RLVRGPSVLAIESRSLSHHSRPTDMRKTIILAAATLFLACVTVVTGVARTIEGPFANTTLASLVDRPHTISSLTARILNAI
Ga0187788_100009063	3300018032	Tropical Peatland	MRKTIVLAIATMFLASASVVAGIIRTVDGPNGNTLLASLVVGPHAIGSLTARIFKPI
Ga0190269_112472842	3300018465	Soil	MRKTIILAAATLLLACVTVVTGVARTFEGPSTSLASLVVSPHTIGGLTARLLNAI
Ga0173481_100004721	3300019356	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI
Ga0173479_100152034	3300019362	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSSNLASLVVSPHTIGGLTARILNAI
Ga0247785_10071561	3300022889	Soil	TTMRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI
Ga0247787_10044304	3300022893	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILN
Ga0247745_10015511	3300022898	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTI
Ga0247795_10020831	3300022899	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSP
Ga0247789_10989021	3300023266	Soil	ILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI
Ga0210094_10311692	3300025549	Natural And Restored Wetlands	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTARILNAI
Ga0207713_10758731	3300025735	Switchgrass Rhizosphere	MRKTIILAAATLLLACATVVTGVARTIEGPSTTLASLVVSPHTIGGLTARLLNAI
Ga0207671_111371141	3300025914	Corn Rhizosphere	MRKTIILAAATLFLASVTVVTGVARTIERPIANTTLASLVDRPHTIGSLTARILNAI
Ga0209240_10511263	3300026304	Grasslands Soil	MRKTIILATATLFLACVTVVAGIARTVEGPNTTLASLMVYPHSIGSLTARILNAI
Ga0256814_10056201	3300026464	Sediment	SGPMTMRKTIILAAATMFLASASVVTGIVRTVDGPLANTNLASLVVGPHAIGSLTARIFNAI
Ga0207575_1001181	3300026748	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTAR
Ga0207469_1007301	3300026767	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLT
Ga0207537_1021452	3300026770	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARLLNAI
Ga0207499_1015002	3300026792	Soil	HSGLTTMRKTIILAAATLFLACVTVVTGVVRTIEGPSTTLASLVVSPHTIGGLTARILNA
Ga0207620_10077002	3300026873	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVV
Ga0207461_10062802	3300026929	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARIL
Ga0208525_10076263	3300027288	Soil	MRKTIILATATLFLACVTVVTGIARTVEGPNTTLAGLMVYPHPIGSLTARIWNAI
Ga0207983_10465701	3300027310	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGSLTARLLNAI
Ga0209967_10160361	3300027364	Arabidopsis Thaliana Rhizosphere	MRKTIILAAATLLLACVTVVTGVARTIEGPSTSLASLVVSPHTIGGLTARILNAI
Ga0208637_10048641	3300027401	Soil	MRKTIVLAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI
Ga0207446_1012582	3300027448	Soil	ARLLPHHSGPTTMRKTIILAAATLLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI
Ga0209177_101777182	3300027775	Agricultural Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGGLTAKILNAI
Ga0307503_108729251	3300028802	Soil	MRKTIILATAAFFLACVTVVTGIARTVEGPNTTLASL
Ga0170834_1009876423	3300031057	Forest Soil	MRKTIILATAAFFLACVTVVTGIARTVEGPNTTLASLMVHPHPIGSLTARILNAI
Ga0170824_1182536192	3300031231	Forest Soil	MRKTIILATATFFLACVTVVTGIARTVEGPNTTLASLMVHPHPIGSLTARIWNAI
Ga0265325_1000011715	3300031241	Rhizosphere	MRKTIILAIATMFLASASVVTGVIRTVDGPIGNTTLASLVVGPHAIGSLTARIFKSI
(restricted) Ga0255312_100171211	3300031248	Sandy Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTSLASLVVSPHNIGGLTARLLNAI
Ga0307506_102379552	3300031366	Soil	MRKTIILATAAFFLACVTVVTGIARTVEGPNTTLASLMGHPHPIGSLTARIWNAI
Ga0170820_161587382	3300031446	Forest Soil	RHSGPTTMRKTIILAIATMFLASASVVTGIIRTVDGPISNTTLASLVVGPHAIGSLTARLFKSI
Ga0307468_1000093664	3300031740	Hardwood Forest Soil	MRKTIILAAATLLLACATVVTGIARTIEGPSTNLASLVVSPHTIGGLTARLLNAI
Ga0310902_100003911	3300032012	Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPH
Ga0310906_100009411	3300032013	Soil	PTTMRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI
Ga0307470_101883122	3300032174	Hardwood Forest Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPPANLASLVVSPHTIGGLTARILNAI
Ga0310889_100112452	3300032179	Soil	MRKTIILAAAILLLACVTVVTGVARTIEGPSTNLASLVVSPHTIGGLTARILNAI
Ga0307471_1035943451	3300032180	Hardwood Forest Soil	MRKTIILAAATLLLACVTVVTGVARTIEGPSTTLASLVVSPHTIGSLTARLLNAI
Ga0307471_1040075181	3300032180	Hardwood Forest Soil	MRKTIILAAATLLLACATVVTGIARNIEGPSTNLASLVVSPHTIGGLTARLLNAI
Ga0307472_1009041982	3300032205	Hardwood Forest Soil	GARLLPHHSGPTTMRKTIILAAATLLLACVTVVTGVARTIEGPSANLASLVVSPHTIGGLTARILNAI
Ga0335082_100477933	3300032782	Soil	MRKTIILAAATMFLASASVVTGIVRTVDGPLVNTTLASLVVGPHAIGSLTARIFNAI
Ga0335084_102550501	3300033004	Soil	MRKTIILAIATMFLASASVVTGIIRTVDGPNGNTTLASLVVGPHAIGSLTARIFKSI
Ga0310810_1000931317	3300033412	Soil	MRKTIILAAATLLLACATVVTGVARTIEGPSTTLASLVVSPHTIGGLTARILNAI
Ga0326726_103034423	3300033433	Peat Soil	MRKTIILAVATMFLASASVVTGIVRTVDGPLANTTLASLVVGPHAIGSLTARIFNAI
Ga0316624_113313441	3300033486	Soil	MRKTIILAVATMFLASASVVTGVVRTVEGPNGNTILASLVVGPHTIGSLTARMFKPI
Ga0316628_1000666953	3300033513	Soil	MRKTIILAIATMFLACVTVVTGVARTIEGPATDTTLASLVVSPHTIGSLTARILNAI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters