Metagenome / Metatranscriptome Family F067142

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067142
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	76 residues
Representative Sequence	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRSTA
Number of Associated Samples	103
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.98 %
% of genes near scaffold ends (potentially truncated)	15.87 %
% of genes from short scaffolds (< 2000 bps)	60.32 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.651 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.746 % of family members)
Environment Ontology (ENVO)	Unclassified (52.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.22% β-sheet: 0.00% Coil/Unstructured: 35.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF12680	SnoaL_2	14.29
PF01408	GFO_IDH_MocA	11.90
PF02639	DUF188	7.14
PF13637	Ank_4	4.76
PF01261	AP_endonuc_2	4.76
PF01872	RibD_C	4.76
PF13302	Acetyltransf_3	2.38
PF06439	3keto-disac_hyd	0.79
PF01906	YbjQ_1	0.79
PF02894	GFO_IDH_MocA_C	0.79
PF04402	SIMPL	0.79
PF07593	UnbV_ASPIC	0.79
PF07332	Phage_holin_3_6	0.79
PF05199	GMC_oxred_C	0.79
PF12796	Ank_2	0.79
PF02771	Acyl-CoA_dh_N	0.79
PF00903	Glyoxalase	0.79
PF03349	Toluene_X	0.79
PF03795	YCII	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	7.14
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	4.76
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	4.76
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.79
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.79
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.79
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.79
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.79
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.65 %
Unclassified	root	N/A	6.35 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	28.57 %
Unclassified	root	N/A	6.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.38 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	28.57 %
Unclassified	root	N/A	6.35 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	25.40 %
Unclassified	root	N/A	6.35 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	3.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Unclassified	root	N/A	6.35 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	3.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Unclassified	root	N/A	6.35 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Unclassified	root	N/A	6.35 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	25.40 %
Unclassified	root	N/A	6.35 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_88109_len_2972_cov_11_983850	All Organisms → cellular organisms → Bacteria	3022	Open in IMG/M
2088090008\|P3_DRAFT_NODE_206780_len_2995_cov_17_761602	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig22810	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig70839	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
2140918006\|ConsensusfromContig50613	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
2140918006\|ConsensusfromContig90301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
2140918007\|ConsensusfromContig12250	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
2140918007\|ConsensusfromContig160054	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
2170459007\|GJ61VE201CMVCP	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300000880\|AL20A1W_1121932	All Organisms → cellular organisms → Bacteria	6333	Open in IMG/M
3300000887\|AL16A1W_10132257	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300001361\|A30PFW6_1033415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5763	Open in IMG/M
3300001664\|P5cmW16_1051762	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300004479\|Ga0062595_101918397	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005171\|Ga0066677_10205806	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005290\|Ga0065712_10032122	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005293\|Ga0065715_10216063	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300005445\|Ga0070708_100033803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4443	Open in IMG/M
3300005518\|Ga0070699_101060281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300005535\|Ga0070684_100777973	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005545\|Ga0070695_100075570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2217	Open in IMG/M
3300005546\|Ga0070696_101912815	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005938\|Ga0066795_10019533	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300005938\|Ga0066795_10035113	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300005947\|Ga0066794_10029659	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300006163\|Ga0070715_10777221	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300006864\|Ga0066797_1085443	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300007258\|Ga0099793_10238242	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	877	Open in IMG/M
3300007788\|Ga0099795_10232049	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300007788\|Ga0099795_10648175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300007820\|Ga0104324_118216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1443	Open in IMG/M
3300007822\|Ga0104325_103712	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300009038\|Ga0099829_10035041	All Organisms → cellular organisms → Bacteria	3614	Open in IMG/M
3300009090\|Ga0099827_11556204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300009143\|Ga0099792_10500522	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300009143\|Ga0099792_10803032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	616	Open in IMG/M
3300009174\|Ga0105241_10944743	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010159\|Ga0099796_10244371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300010375\|Ga0105239_10559213	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300011271\|Ga0137393_10917698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300011444\|Ga0137463_1041745	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300011444\|Ga0137463_1165858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300011998\|Ga0120114_1003230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4371	Open in IMG/M
3300012005\|Ga0120161_1021084	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300012010\|Ga0120118_1165385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	525	Open in IMG/M
3300012198\|Ga0137364_10001185	All Organisms → cellular organisms → Bacteria	11971	Open in IMG/M
3300012199\|Ga0137383_10041765	All Organisms → cellular organisms → Bacteria	3257	Open in IMG/M
3300012202\|Ga0137363_10218111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1538	Open in IMG/M
3300012205\|Ga0137362_10111608	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300012208\|Ga0137376_10003375	All Organisms → cellular organisms → Bacteria	9942	Open in IMG/M
3300012211\|Ga0137377_10192767	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300012285\|Ga0137370_10005379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5809	Open in IMG/M
3300012357\|Ga0137384_11281972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300012362\|Ga0137361_11477259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300012683\|Ga0137398_10825453	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012917\|Ga0137395_10020049	All Organisms → cellular organisms → Bacteria	3870	Open in IMG/M
3300012924\|Ga0137413_11273476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300013770\|Ga0120123_1048509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300013832\|Ga0120132_1007314	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300015090\|Ga0167634_1034821	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300015192\|Ga0167646_1001748	All Organisms → cellular organisms → Bacteria	7676	Open in IMG/M
3300015192\|Ga0167646_1004978	All Organisms → cellular organisms → Bacteria	4114	Open in IMG/M
3300018071\|Ga0184618_10196239	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300019874\|Ga0193744_1004544	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300019874\|Ga0193744_1043234	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300019877\|Ga0193722_1001357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	5704	Open in IMG/M
3300019879\|Ga0193723_1015440	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300019880\|Ga0193712_1099685	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300019881\|Ga0193707_1006301	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300019881\|Ga0193707_1101723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300019883\|Ga0193725_1044516	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300019886\|Ga0193727_1001087	All Organisms → cellular organisms → Bacteria	11113	Open in IMG/M
3300019886\|Ga0193727_1024953	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300019886\|Ga0193727_1025354	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2076	Open in IMG/M
3300019886\|Ga0193727_1179104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300019887\|Ga0193729_1012499	All Organisms → cellular organisms → Bacteria	3803	Open in IMG/M
3300019887\|Ga0193729_1026839	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300019887\|Ga0193729_1146676	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300019888\|Ga0193751_1012280	All Organisms → cellular organisms → Bacteria → Proteobacteria	4466	Open in IMG/M
3300019890\|Ga0193728_1001991	All Organisms → cellular organisms → Bacteria	10578	Open in IMG/M
3300019890\|Ga0193728_1067610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1705	Open in IMG/M
3300020006\|Ga0193735_1013405	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300020021\|Ga0193726_1005417	All Organisms → cellular organisms → Bacteria	7569	Open in IMG/M
3300020022\|Ga0193733_1194028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	525	Open in IMG/M
3300020059\|Ga0193745_1009847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2055	Open in IMG/M
3300020059\|Ga0193745_1091809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300020061\|Ga0193716_1012157	All Organisms → cellular organisms → Bacteria	4406	Open in IMG/M
3300020070\|Ga0206356_11122759	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300021363\|Ga0193699_10010726	All Organisms → cellular organisms → Bacteria	3288	Open in IMG/M
3300021363\|Ga0193699_10025217	All Organisms → cellular organisms → Bacteria → Proteobacteria	2194	Open in IMG/M
3300021363\|Ga0193699_10086740	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300021363\|Ga0193699_10093089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1211	Open in IMG/M
3300021363\|Ga0193699_10394464	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300021411\|Ga0193709_1096376	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300023056\|Ga0233357_1040330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	593	Open in IMG/M
3300024249\|Ga0247676_1062339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300024283\|Ga0247670_1044459	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300025885\|Ga0207653_10338135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300025910\|Ga0207684_10426595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1139	Open in IMG/M
3300025911\|Ga0207654_10563745	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300025912\|Ga0207707_10218734	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300026271\|Ga0209880_1016349	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300026273\|Ga0209881_1076918	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300026300\|Ga0209027_1145342	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300026320\|Ga0209131_1056997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2182	Open in IMG/M
3300026542\|Ga0209805_1440624	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300027565\|Ga0209219_1017325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1739	Open in IMG/M
3300027667\|Ga0209009_1026454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1421	Open in IMG/M
3300027846\|Ga0209180_10286720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300027903\|Ga0209488_10011085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6604	Open in IMG/M
3300028047\|Ga0209526_10069545	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300028536\|Ga0137415_10003721	All Organisms → cellular organisms → Bacteria	15160	Open in IMG/M
3300028768\|Ga0307280_10075038	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300028799\|Ga0307284_10061581	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300028828\|Ga0307312_10249313	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300031740\|Ga0307468_101295402	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300033412\|Ga0310810_10014706	All Organisms → cellular organisms → Bacteria	9282	Open in IMG/M
3300033475\|Ga0310811_10078592	All Organisms → cellular organisms → Bacteria	4332	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.03%
Host-Associated	Host-Associated	3.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Plants	Host-Associated → Plants	3.97%
Aquatic	Environmental → Aquatic	3.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Sediment	Environmental → Aquatic → Sediment	3.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.78%
Loam	Environmental → Terrestrial → Soil → Loam	10.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	6.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.76%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300007820	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 Soapdenovo	Environmental	Open in IMG/M
3300007822	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-8-2 Soapdenovo	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012005	Permafrost microbial communities from Nunavut, Canada - A15_80cm_0M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00614720	2088090004	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA
P3_DRAFT_01679930	2088090008	Soil	MRSGFAAGLMGIGGILISFGTVIVVLALLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGRNSDQSARSERGSA
A2_c1_01053090	2124908043	Soil	MRSGLAAALMGIGGIFMSFGTVIVVLALFARHDNVRAELPTMTTVAAGSIVVGAVMFGAGYLLGRMGRPASDSTRADRSAA
A5_c1_01546590	2124908044	Soil	MGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA
P1_C_01204450	2140918006	Soil	MGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA
P1_C_00478390	2140918006	Soil	MRSGFAASLMGIGGILMSFGAVIVVLVLLARRGDPHTRSPSMITVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA
A_all_C_00588670	2140918007	Soil	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA
A_all_C_01703420	2140918007	Soil	GIGGILMSFGAVIVVLALLARQADTRTELPTMITVAAGSLVVGAVLFGAGYLLGRLGRNSDQEESLISP
L02_03211590	2170459007	Grass Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARTGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRDSDRSLDSARTS
AL20A1W_11219321	3300000880	Permafrost	RSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
AL16A1W_101322571	3300000887	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTN*
A30PFW6_10334157	3300001361	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
P5cmW16_10517622	3300001664	Permafrost	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAGGSLIVGALMFGAGYLLGRIGRNSERPVSP*
Ga0062595_1019183971	3300004479	Soil	MRSGLAAALMGIGGILVSFGAVIVVLVLLARSGDTRGQLPAMTSVAVASLVIGAVMFGAGYLLGRVGRDSNRSLDSARTS*
Ga0066677_102058062	3300005171	Soil	MRSGLAAALMGIGGILLSFGTVILVLTIFARANDWRVQLPAMGSVATGSLVIGGVMFALGFLLGRVGRRADARSY*
Ga0065712_100321222	3300005290	Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNS
Ga0065715_102160631	3300005293	Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070708_1000338035	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA*
Ga0070699_1010602811	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGFAAGLMGIGGILASFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA*
Ga0070684_1007779732	3300005535	Corn Rhizosphere	MRSGIAATLMGFGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070695_1000755701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0070696_1019128152	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGLAAALMGIGGILLSFGAVIVVLALFARSGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRNSEASLTP*
Ga0066795_100195332	3300005938	Soil	MRSGFAAILMGIGGILMSFGTVIVVLALLARRGDPHTQSPAMMTVATGSLVVGAVLFGAGYLLGRVGRNSDQSARSERGTA*
Ga0066795_100351131	3300005938	Soil	MRSGFAAGLMGIGGILISFGTVIVVLALLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0066794_100296593	3300005947	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0070715_107772211	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGLAATLMGIGGILLSFGAVIVVLAFFARTGDTRGQLPAMTTAALGSLIVGAVMFGAGYLLGRVGRDSDRSLDSSR
Ga0066797_10854432	3300006864	Soil	MRSGLAASLMGIGGILMSFGAVIVVLVLLARRGDPHSRSPSMIAVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA*
Ga0099793_102382422	3300007258	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNRSAGDRSTA*
Ga0099795_102320492	3300007788	Vadose Zone Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGALLIGAVMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0099795_106481751	3300007788	Vadose Zone Soil	LRTLKEDQMRSGLAAALMGIGGILVSFGAVIVVLALLARNGDTRGQLPAMTTVAVGSLLTEAVMFGAGYLLGRVGRDSDGSLDSARTG*
Ga0104324_1182162	3300007820	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRTELPAMITVAAGSLVVGAVLFGTGYLLGRLGRNSDQSARSERGSA*
Ga0104325_1037122	3300007822	Soil	MRSGFAAGLMGIGGILISFGTVIVVLAFLGRRGDTRPELPAMITVAAGSLVVGAVLFGTGYLLGRLGQNSDQSARSERGSA*
Ga0099829_100350414	3300009038	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQAGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0099827_115562041	3300009090	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGSGETRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0099792_105005222	3300009143	Vadose Zone Soil	VSFGAVIVVLALLARNGDTRGQLPAMTTVAVGSLLIGAIMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0099792_108030322	3300009143	Vadose Zone Soil	MRSGLAAALMGIGGILMSFGAVIVVLALLARNGDTRGQLQAMTTVAVGSLLIGAVMFGAGYLLSRVGRNSDQSLDSARTG*
Ga0105241_109447432	3300009174	Corn Rhizosphere	VIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD*
Ga0099796_102443712	3300010159	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDRSTA*
Ga0105239_105592131	3300010375	Corn Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDQTLDSARTG*
Ga0137393_109176982	3300011271	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137463_10417453	3300011444	Soil	MRSGLAAGLMGIGGILISFGAVIVVLAFFARQGGETRLQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRQTDQSAGDRSAA*
Ga0137463_11658582	3300011444	Soil	MRSGFAAGLMGIGGILLSFGSVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120164_10054784	3300011987	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLL*
Ga0120114_10032304	3300011998	Permafrost	MRSGFAAGLMGIGGILLSFGSVIVVLAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120161_10210843	3300012005	Permafrost	MRSGLAAGLMGIGGILMSFGAVIVVLALFARQGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRRTN*
Ga0120118_11653851	3300012010	Permafrost	MRSGFVAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSAGDRSNA*
Ga0137364_100011854	3300012198	Vadose Zone Soil	MRAGIAAMLMGIGGILITFGTVVIVLSFFARQGDTRLELPAMATLATGALVVGAVMLGAGFLLGRVGRSSPPIRNS*
Ga0137383_100417652	3300012199	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRSTA*
Ga0137382_104045771	3300012200	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGALVVGAVM
Ga0137363_102181112	3300012202	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA*
Ga0137362_101116083	3300012205	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGSGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137376_1000337512	3300012208	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDRTTA*
Ga0137377_101927672	3300012211	Vadose Zone Soil	MRSGLVAGLMGIGGILIAFGAVIVVLAIFARQGETRHQLPAMTTLAVGSIVVGAVMFAAGFLLSRIGGGSDDSSGAALNRT*
Ga0137370_100053795	3300012285	Vadose Zone Soil	MRAGIAAMLMGIGGILITFGAVVIVLSFFARQGDTRLELPAMATLATGALVVGAVMLGAGFLLGRVGRSSPPIRNS*
Ga0137384_112819722	3300012357	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLNRVGRNSNQSAGDRS
Ga0137361_114772592	3300012362	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA*
Ga0137398_108254532	3300012683	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVG
Ga0137395_100200492	3300012917	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA*
Ga0137394_104223581	3300012922	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGA
Ga0137413_112734761	3300012924	Vadose Zone Soil	MRSGLAAALKGIGGILMSFGAVIVVLALFARNGDTGGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSDQSLDSARTG*
Ga0137419_118777281	3300012925	Vadose Zone Soil	MRSGLVAALMGIGGILLSFGAVIVVIALFARQGEWRHELPAMTTVAVGSLVIGGVMFGAG
Ga0120123_10485091	3300013770	Permafrost	MRSGLAAALMGIGGILMSFGAVIVVLALFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA*
Ga0120132_10073142	3300013832	Permafrost	MRSGFAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAGGSLIVGALMFGAGYLLGRIGRNSERPVSP*
Ga0167634_10348212	3300015090	Glacier Forefield Soil	MGIGGILMSFGAVIVVLALFAREGGETRQQLPAMTTVAVGALVVGAVLFGAGYLLGRVGRNSDQSAGDRSTA*
Ga0167646_10017489	3300015192	Glacier Forefield Soil	MRSGFAAGLMGIGGILLSFGTVIVVLSFFARHGGDTRSELPAMTTAAAGSLVVGAVLFGAGYLLGRLGRNSDQSARDRSTA*
Ga0167646_10049787	3300015192	Glacier Forefield Soil	MRSGFSAGLMGIGGILISFGTVIFVLALFARQGDTRGELPAMTMLATGSILVGAVLFGAGYLLGRIGRAPASP*
Ga0184604_101461092	3300018000	Groundwater Sediment	MRSGLAAGLMGIGWILISFGAVIAVLYVFARQGGDTLSELPAMATGAVASLVVGAVMFVVGYLLSRMGRSSDRRPDGSIA
Ga0184618_101962392	3300018071	Groundwater Sediment	MRSGFAAGLMGIGGILLSFGAVIVILAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARL
Ga0193744_10045444	3300019874	Soil	MGVGGILVSFGAVIVVLALFARQGDTSIELPAMTTVLTGSIVVGVVMFGAGYLLGRIGRSADSKQPERGAA
Ga0193744_10432341	3300019874	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARIGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRTGRDSNRSLDSARTG
Ga0193722_10013578	3300019877	Soil	MGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0193722_10157641	3300019877	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFG
Ga0193723_10154403	3300019879	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193712_10902151	3300019880	Soil	MRSAISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYV
Ga0193712_10996852	3300019880	Soil	GSGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193707_10063013	3300019881	Soil	MRSGLAAGLMGIGGILMSFGAVIVVLAFFARQGGETREQLPAMTTLAVGSLVVGAVLFGAGYLLGRVGRNSAQSAGDRSTA
Ga0193707_11017232	3300019881	Soil	MGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYLLGRIGRSSDKSKQPERGTA
Ga0193725_10445161	3300019883	Soil	MLTWCATTRYDYNSGLRKINEDPMRSGLAAALMGIGGILVSFGAVIVVLALFARHGDVRGQLPAMTTVAAGSLVVGAVMFAAGYLLGRMGR
Ga0193727_100108710	3300019886	Soil	MSFGAVIVVLALFARHGDVRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRVGRNSEASLTP
Ga0193727_10249533	3300019886	Soil	MGVGGILISFGAVIVVLSLFARQGDTRIELPAMTTVMTGSIVVGVVMFGAGYLLGRIGRSADQSKQPERGTA
Ga0193727_10253544	3300019886	Soil	MRSGISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVIGVVMLGAGYILGRIGRGSDQSKQQERGTA
Ga0193727_11791041	3300019886	Soil	MRSGISAGLMGVGGILVSFGAVIVVLSLFARQGETRIELPAMTTVMTGSIVVGAVMFGAGYLLGRIGRSSGQSKQPERGAA
Ga0193729_10124993	3300019887	Soil	MRSGFAAGLMGIGGILLSFGAVIVILAFFARQGGDTRLELPAMTTVALGSLVVGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193729_10268391	3300019887	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193729_11466762	3300019887	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAIFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSASDRSTA
Ga0193751_10122802	3300019888	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAIFAREGGATRLQLPEMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQCRPVEARP
Ga0193728_100199110	3300019890	Soil	MGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193728_10676103	3300019890	Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTV
Ga0193735_10134055	3300020006	Soil	MGIGGILLSFGAVIVVLALFARNGETRGELPAMTTAAVGSLVIGAVMFGAGYLLGRVGRNSDRSLDSARTG
Ga0193726_10054174	3300020021	Soil	MRSGISAGLMGVGGILISFGAVIIVLSLFARQGDTRIELPAMTTLLTASIVVGAVMFGAGYLLGRIGRSAVTP
Ga0193733_11940282	3300020022	Soil	MGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLIVGAVMFGAGFLLSRVGGNSNQSAGDRSTA
Ga0193745_10098471	3300020059	Soil	MGIGGILMSFGAVIVVLALFARIGDTRGQLPAMTTVAVGSLVVGAVMFGAGYLLGRTGRDSNRSLDSARTG
Ga0193745_10918092	3300020059	Soil	FAAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVALGSLVAGAVMFGAGFLLARLGGNSNQSGDRSTA
Ga0193716_10121573	3300020061	Soil	MRSGLAAALMGIGGIFVSFGAVIAVLVLFARYDNVRGELPAMTTMSTASIVVGAVMFGAGYLLNRMGRSNSAREDRSAA
Ga0206356_111227592	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	IVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0193699_100107265	3300021363	Soil	MGIGGILMSFGAVIVVLALFARNSDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNQSLDSARTG
Ga0193699_100252174	3300021363	Soil	MRSGLTAALMGIGGIFVSFGAVIVVLSLFARQGETRGELPAMTTLATISIVGGAVLFGAGYLLGRVGRNSNQSDRPERTA
Ga0193699_100867402	3300021363	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGDTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSDRAPISP
Ga0193699_100930893	3300021363	Soil	GGILVSFGAVIVVLSLFARQGETRIELPAMTTVLTGSIVVGAVMFGAGYLLGRIGRSSDKSKQPERGTA
Ga0193699_103944641	3300021363	Soil	MRSGLIAGLMGIGGIFVSFGAVIVVLAIFTRQSEWRHELPTMTTVAVGSIVIGAVMFGAGFLLSR
Ga0193709_10963762	3300021411	Soil	MGIGGIFVSFGAVIVVLSLFARQGETGGELPAMTTLATISIVGGAVLFGAGYLLGRVGRNSNQSDRPERTA
Ga0233357_10403302	3300023056	Soil	MGIGGILLSFGVVIVVLALFARQGGGDTRLQLPAMTKVALGSLVVGGVMFGAGFLLNRIGGNSNQSSSDRSAA
Ga0247676_10623392	3300024249	Soil	LSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0247670_10444592	3300024283	Soil	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207653_103381352	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRSGIAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207684_104265952	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGIGGILLSFGAVIVVLAFFARQGGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSDQSAGDRSTA
Ga0207654_105637451	3300025911	Corn Rhizosphere	FGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDRSLDSARTD
Ga0207707_102187342	3300025912	Corn Rhizosphere	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVGSLVVGGLMFGAGYLLGRVGRNSDQTLDSARTG
Ga0209880_10163492	3300026271	Soil	MRSGFAAILMGIGGILMSFGTVIVVLALLARRGDPHTQSPAMMTVATGSLVVGAVLFGAGYLLGRVGRNSDQSARSERGTA
Ga0209881_10769181	3300026273	Soil	MGIGGILMSFGAVIVVLVLLARRGDPHSRSPSMIAVATGSLVVGAVLFGAGYLLGRLGRNSDQSARSERGTA
Ga0209027_11453422	3300026300	Grasslands Soil	LAFGTVVVVLALFARNGDTRLQLPAMGTVATGSLVIGAAMFGAGFLLGRIGRDSSPSTPVRNS
Ga0209131_10569973	3300026320	Grasslands Soil	MGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNRSAGDRSTA
Ga0209805_14406241	3300026542	Soil	EELMRSGLAAALMGIGGILLSFGTVILVLTIFARANDWRVQLPAMGSVATGSLVIGGVMFALGFLLGRVGRRADARSY
Ga0209219_10173252	3300027565	Forest Soil	MRSGLAAGLMGIGGILLSFGAVIVVLALFARQGGGDTRLQLPAMTKVALGSLVVGGVMFGAGFLLNRIGGNSNQSSSDRSAA
Ga0209009_10264542	3300027667	Forest Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFLAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGGNSNQSAGDSGTA
Ga0209180_102867202	3300027846	Vadose Zone Soil	MRSGFSAGLMGIGGILLSFGAVIVVLAFFARQAGGDTRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNQSAGDRSTA
Ga0209488_100110857	3300027903	Vadose Zone Soil	MGIGGILMSFGAVIVVLALLARNGDTRGQLQAMTTVAVGSLLIGAVMFGAGYLLSRVGRNSDQSLDSARTG
Ga0209526_100695453	3300028047	Forest Soil	MRSGFVAGLMGIGGILLSFGAVIVVLAFFARQGGDTRLELPAMTTVAVGSLVVGAVMFGAGFLLARLGGNSNQSARDRNTA
Ga0137415_100037214	3300028536	Vadose Zone Soil	MRSGFAAGLMGIGGILLSFGAVIVVLAFFAREGGATRLQLPAMTTVALGSLVVGAVMFGAGFLLSRVGRNSNRSAGDRSTA
Ga0307280_100253584	3300028768	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIG
Ga0307280_100750382	3300028768	Soil	LAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0307284_100615812	3300028799	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARTG
Ga0307312_102493132	3300028828	Soil	MRSGLAAALMGIGGILMSFGAVIVVLALFARNGNTRGQLPAMTTVAVGSLLIGAVMFGAGYLLGRVGRNSNPSLDSARSG
Ga0307468_1012954022	3300031740	Hardwood Forest Soil	MRSGLAATLMGIGGILLSFGAVIVVLALFARTGDTRGQLPAMTAAAVVSLVGGAVMFGAGYLLGRAGRSSDRSLDSARTG
Ga0310810_100147067	3300033412	Soil	MGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVASLIIGAVMFGAGYLLGRVGRDSDRSLDSARTG
Ga0310811_100785925	3300033475	Soil	MRSGLAATLMGIGGILLSFGAVIVVLAFFARNGDTRGQLPAMTTAAVASLIIGAVMFGAGYLLGRVGRDSDRSLDSARTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067142

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences