Metagenome / Metatranscriptome Family F067113

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067113
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	44 residues
Representative Sequence	MPKATMHRVECLDCGKVAIRLIPIDIPVYCLRCGSAALMWMPTA
Number of Associated Samples	59
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.84 %
% of genes near scaffold ends (potentially truncated)	39.68 %
% of genes from short scaffolds (< 2000 bps)	76.98 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.635 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (62.698 % of family members)
Environment Ontology (ENVO)	Unclassified (95.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.78% Coil/Unstructured: 72.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01381	HTH_3	3.97
PF13730	HTH_36	3.17
PF12728	HTH_17	2.38
PF01695	IstB_IS21	1.59
PF07505	DUF5131	0.79
PF03118	RNA_pol_A_CTD	0.79
PF00308	Bac_DnaA	0.79
PF13392	HNH_3	0.79
PF00176	SNF2-rel_dom	0.79
PF00589	Phage_integrase	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	2.38
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.79
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.79
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
All Organisms	root	All Organisms	29.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
cellular organisms	root	All Organisms → cellular organisms	15.08 %
Viruses	superkingdom	All Organisms → Viruses	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	11.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	6.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	11.11 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	6.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	11.11 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	6.35 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11.11 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.35 %
Tepidiformia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia	3.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	11.11 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.35 %
Tepidiformales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales	3.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	9.52 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.35 %
Tepidiformaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae	3.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	9.52 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.35 %
Tepidiforma	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma	3.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	9.52 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	6.35 %
Tepidiforma bonchosmolovskayae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma → Tepidiforma bonchosmolovskayae	3.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.17 %
uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001726\|JGI24653J20064_1020556	Not Available	533	Open in IMG/M
3300002511\|JGI25131J35506_1045360	Not Available	609	Open in IMG/M
3300002760\|JGI25136J39404_1032337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	960	Open in IMG/M
3300002760\|JGI25136J39404_1057250	Not Available	724	Open in IMG/M
3300003539\|FS891DNA_10315475	Not Available	553	Open in IMG/M
3300003690\|PicViral_1002965	Not Available	4534	Open in IMG/M
3300006076\|Ga0081592_1166034	Not Available	763	Open in IMG/M
3300006164\|Ga0075441_10225090	Not Available	695	Open in IMG/M
3300006164\|Ga0075441_10379241	Not Available	513	Open in IMG/M
3300006165\|Ga0075443_10115146	Not Available	934	Open in IMG/M
3300006165\|Ga0075443_10184158	Not Available	745	Open in IMG/M
3300006190\|Ga0075446_10120626	Not Available	759	Open in IMG/M
3300006947\|Ga0075444_10123290	Not Available	1111	Open in IMG/M
3300006947\|Ga0075444_10190209	Not Available	835	Open in IMG/M
3300006947\|Ga0075444_10200751	Not Available	806	Open in IMG/M
3300006947\|Ga0075444_10337890	Not Available	575	Open in IMG/M
3300006947\|Ga0075444_10399611	Not Available	517	Open in IMG/M
3300007758\|Ga0105668_1111951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3676	Open in IMG/M
3300008216\|Ga0114898_1004008	All Organisms → cellular organisms → Bacteria	6883	Open in IMG/M
3300008216\|Ga0114898_1006124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	5183	Open in IMG/M
3300008216\|Ga0114898_1016101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma → Tepidiforma bonchosmolovskayae	2694	Open in IMG/M
3300008216\|Ga0114898_1018102	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2501	Open in IMG/M
3300008216\|Ga0114898_1020912	Not Available	2282	Open in IMG/M
3300008216\|Ga0114898_1059073	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300008216\|Ga0114898_1114401	Not Available	797	Open in IMG/M
3300008216\|Ga0114898_1146422	Not Available	682	Open in IMG/M
3300008216\|Ga0114898_1160403	Not Available	644	Open in IMG/M
3300008216\|Ga0114898_1207692	Not Available	541	Open in IMG/M
3300008217\|Ga0114899_1251590	Not Available	544	Open in IMG/M
3300008218\|Ga0114904_1058358	Not Available	993	Open in IMG/M
3300008218\|Ga0114904_1125057	Not Available	613	Open in IMG/M
3300008219\|Ga0114905_1167330	Not Available	724	Open in IMG/M
3300008219\|Ga0114905_1213897	Not Available	617	Open in IMG/M
3300008219\|Ga0114905_1292904	Not Available	500	Open in IMG/M
3300009412\|Ga0114903_1105505	Not Available	623	Open in IMG/M
3300009412\|Ga0114903_1128545	Not Available	556	Open in IMG/M
3300009413\|Ga0114902_1016289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2461	Open in IMG/M
3300009413\|Ga0114902_1071433	Not Available	964	Open in IMG/M
3300009413\|Ga0114902_1165445	Not Available	552	Open in IMG/M
3300009414\|Ga0114909_1204408	Not Available	500	Open in IMG/M
3300009418\|Ga0114908_1049692	Not Available	1510	Open in IMG/M
3300009418\|Ga0114908_1211063	Not Available	600	Open in IMG/M
3300009418\|Ga0114908_1239127	Not Available	554	Open in IMG/M
3300009595\|Ga0105214_107688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma → Tepidiforma bonchosmolovskayae	712	Open in IMG/M
3300009602\|Ga0114900_1023780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR0-KM15-C219	2158	Open in IMG/M
3300009602\|Ga0114900_1035274	Not Available	1639	Open in IMG/M
3300009602\|Ga0114900_1087643	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	872	Open in IMG/M
3300009603\|Ga0114911_1049224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	1312	Open in IMG/M
3300009604\|Ga0114901_1006842	Not Available	5215	Open in IMG/M
3300009612\|Ga0105217_116221	Not Available	502	Open in IMG/M
3300009620\|Ga0114912_1145447	Not Available	554	Open in IMG/M
3300009620\|Ga0114912_1148753	Not Available	547	Open in IMG/M
3300009622\|Ga0105173_1114264	Not Available	504	Open in IMG/M
3300009791\|Ga0105235_115791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	833	Open in IMG/M
3300021977\|Ga0232639_1415461	Not Available	521	Open in IMG/M
3300021978\|Ga0232646_1274842	Not Available	575	Open in IMG/M
3300023444\|Ga0256747_1222308	Not Available	875	Open in IMG/M
3300025049\|Ga0207898_1011725	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	1084	Open in IMG/M
3300025125\|Ga0209644_1039256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	1068	Open in IMG/M
3300025216\|Ga0207883_1030727	Not Available	681	Open in IMG/M
3300025218\|Ga0207882_1028962	Not Available	799	Open in IMG/M
3300025218\|Ga0207882_1048294	Not Available	590	Open in IMG/M
3300025218\|Ga0207882_1049126	Not Available	584	Open in IMG/M
3300025236\|Ga0207884_1077266	Not Available	504	Open in IMG/M
3300025244\|Ga0207908_1024899	Not Available	780	Open in IMG/M
3300025247\|Ga0207880_1017263	Not Available	1172	Open in IMG/M
3300025251\|Ga0208182_1001212	Not Available	12617	Open in IMG/M
3300025251\|Ga0208182_1007213	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3420	Open in IMG/M
3300025251\|Ga0208182_1011044	All Organisms → Viruses → Predicted Viral	2521	Open in IMG/M
3300025251\|Ga0208182_1012837	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2277	Open in IMG/M
3300025251\|Ga0208182_1013597	Not Available	2185	Open in IMG/M
3300025251\|Ga0208182_1050036	Not Available	869	Open in IMG/M
3300025257\|Ga0207899_1054578	Not Available	621	Open in IMG/M
3300025260\|Ga0207895_1043633	Not Available	750	Open in IMG/M
3300025260\|Ga0207895_1043742	Not Available	749	Open in IMG/M
3300025260\|Ga0207895_1046484	Not Available	723	Open in IMG/M
3300025264\|Ga0208029_1003306	Not Available	5715	Open in IMG/M
3300025264\|Ga0208029_1003752	Not Available	5227	Open in IMG/M
3300025264\|Ga0208029_1009218	Not Available	2843	Open in IMG/M
3300025264\|Ga0208029_1017268	All Organisms → Viruses → Predicted Viral	1858	Open in IMG/M
3300025264\|Ga0208029_1062767	Not Available	745	Open in IMG/M
3300025267\|Ga0208179_1003737	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6314	Open in IMG/M
3300025267\|Ga0208179_1012990	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	2551	Open in IMG/M
3300025267\|Ga0208179_1017598	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	2037	Open in IMG/M
3300025270\|Ga0208813_1023253	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	1527	Open in IMG/M
3300025270\|Ga0208813_1097728	Not Available	589	Open in IMG/M
3300025274\|Ga0208183_1058154	Not Available	761	Open in IMG/M
3300025274\|Ga0208183_1064258	Not Available	712	Open in IMG/M
3300025274\|Ga0208183_1068564	Not Available	682	Open in IMG/M
3300025280\|Ga0208449_1015206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	2549	Open in IMG/M
3300025280\|Ga0208449_1028578	Not Available	1663	Open in IMG/M
3300025280\|Ga0208449_1149532	Not Available	507	Open in IMG/M
3300025281\|Ga0207881_1025924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	999	Open in IMG/M
3300025281\|Ga0207881_1041115	Not Available	756	Open in IMG/M
3300025282\|Ga0208030_1112623	Not Available	674	Open in IMG/M
3300025282\|Ga0208030_1163532	Not Available	515	Open in IMG/M
3300025286\|Ga0208315_1009722	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	3438	Open in IMG/M
3300025286\|Ga0208315_1038034	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1348	Open in IMG/M
3300025286\|Ga0208315_1078806	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	813	Open in IMG/M
3300025286\|Ga0208315_1153541	Not Available	512	Open in IMG/M
3300025293\|Ga0208934_1023978	Not Available	1222	Open in IMG/M
3300025296\|Ga0208316_1025940	Not Available	1427	Open in IMG/M
3300025300\|Ga0208181_1046281	Not Available	916	Open in IMG/M
3300025301\|Ga0208450_1113737	Not Available	580	Open in IMG/M
3300025305\|Ga0208684_1010398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	3300	Open in IMG/M
3300025873\|Ga0209757_10004824	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300027704\|Ga0209816_1267385	Not Available	531	Open in IMG/M
3300028018\|Ga0256381_1005019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma → Tepidiforma bonchosmolovskayae	2044	Open in IMG/M
3300028018\|Ga0256381_1009744	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-KM21-C338	1555	Open in IMG/M
3300028018\|Ga0256381_1013911	All Organisms → Viruses → Predicted Viral	1316	Open in IMG/M
3300028018\|Ga0256381_1017580	Not Available	1173	Open in IMG/M
3300028018\|Ga0256381_1055313	Not Available	603	Open in IMG/M
3300028022\|Ga0256382_1000432	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	4044	Open in IMG/M
3300028022\|Ga0256382_1000855	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300028022\|Ga0256382_1109908	Not Available	662	Open in IMG/M
3300028039\|Ga0256380_1001368	All Organisms → Viruses → Predicted Viral	3082	Open in IMG/M
3300028039\|Ga0256380_1015434	Not Available	1237	Open in IMG/M
3300028039\|Ga0256380_1019841	Not Available	1094	Open in IMG/M
3300028039\|Ga0256380_1019877	Not Available	1093	Open in IMG/M
3300028039\|Ga0256380_1033757	Not Available	813	Open in IMG/M
3300028039\|Ga0256380_1038827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → Tepidiformales → Tepidiformaceae → Tepidiforma → Tepidiforma bonchosmolovskayae	747	Open in IMG/M
3300028039\|Ga0256380_1038886	Not Available	746	Open in IMG/M
3300028039\|Ga0256380_1051322	Not Available	625	Open in IMG/M
3300028039\|Ga0256380_1053248	Not Available	610	Open in IMG/M
3300028039\|Ga0256380_1068108	Not Available	518	Open in IMG/M
3300034656\|Ga0326748_064631	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	71.43%
Pelagic	Environmental → Aquatic → Marine → Pelagic	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.52%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	70.63%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.52%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.38%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.79%
Microbial Mats	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats	0.79%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.79%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.79%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	62.70%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	14.29%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.76%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	3.17%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.79%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.79%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.79%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.79%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.79%
Hydrothermal Fe-Rich Mat	Environmental → Aquatic → Marine → Hydrothermal Vents → Microbial Mats → Hydrothermal Fe-Rich Mat	0.79%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.79%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001726	Marine viral communities from the Deep Pacific Ocean - MSP-103	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009612	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3651_4511	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental	Open in IMG/M
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental	Open in IMG/M
3300021977	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Hafa_FS925 _150kmer	Environmental	Open in IMG/M
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental	Open in IMG/M
3300023444	Hydrothermal Fe-rich mat microbial community from Loihi Seamount, Hawaii, USA - 675-SC9	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025216	Marine viral communities from the Deep Pacific Ocean - MSP-109 (SPAdes)	Environmental	Open in IMG/M
3300025218	Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)	Environmental	Open in IMG/M
3300025236	Marine viral communities from the Deep Pacific Ocean - MSP-144 (SPAdes)	Environmental	Open in IMG/M
3300025244	Marine viral communities from the Deep Pacific Ocean - MSP-81 (SPAdes)	Environmental	Open in IMG/M
3300025247	Marine viral communities from the Deep Pacific Ocean - MSP-91 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025260	Marine viral communities from the Deep Pacific Ocean - MSP112 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental	Open in IMG/M
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025293	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)	Environmental	Open in IMG/M
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental	Open in IMG/M
3300025300	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300034656	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24653J20064_10205561	3300001726	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPEDIPVYCLRCGSAALMWMPTA*
JGI25131J35506_10453602	3300002511	Marine	MTLRMHRVECLDCGKVAMRLIPEDIPLYCGRCGSAALMWMPTA*
JGI25136J39404_10323373	3300002760	Marine	MTLRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA*
JGI25136J39404_10572502	3300002760	Marine	MSKATMHRVECLDCGKIAVRLIPEDIPLYCLRCGSAALMWMPTA*
FS891DNA_103154752	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	MPKATMHRVECLDCGKVAIRLIPIDIPVYCLRCGSAALMWMPTA*
PicViral_10029652	3300003690	Marine, Hydrothermal Vent Plume	MSKMHRVQCLDCHLVAFRLIPIDVPVYCRHCGSAALMWRPAA*
Ga0081592_11660343	3300006076	Diffuse Hydrothermal Fluids	MPKATMHRVECLDCGKIAVRLIPIDIPVYCLRCGSAALSWKETA*
Ga0075441_102250904	3300006164	Marine	MLKMHRVECLESDCREVYFRLIPIDIPIYCRACGSAALMWRPV*
Ga0075441_103792412	3300006164	Marine	MPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA*
Ga0075443_101151463	3300006165	Marine	MTLTMHRVECLDCGKVAFRLIPEDIPVYCRECGSAALMWRPV*
Ga0075443_101841581	3300006165	Marine	MTLRMHRVECLDCGKVAVRLIPIDIPVFCLDCGSAALMWMPTA*
Ga0075446_101206264	3300006190	Marine	MLKMHRVECLESDCREVYFRVIPIDIPIYCRSCGSAALMW
Ga0075444_101232901	3300006947	Marine	MLKMHRVECLEVDCREVYFRLIPIDIPIYCRSCGSAALMWRPV*
Ga0075444_101902091	3300006947	Marine	SRSGTIITWSRSMSNDIKRVTCLDCQYVAFRIIPIDIPVYCQKCGSEALMWRSA*
Ga0075444_102007513	3300006947	Marine	MLKMHRVECLESDCREVYFRVIPIDIPIYCRSCGSAALMWRPV*
Ga0075444_103378901	3300006947	Marine	MLKMHRVECLDCGLVAIRLIPIDIPVYCGRCGSAALMWEPTA*
Ga0075444_103996111	3300006947	Marine	MTLRMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWMPTA*
Ga0105668_11119511	3300007758	Background Seawater	TIITWSRSMSKMHRVECLDCGKVAIRLIPIDIPVYCLRCGSAALMWMPTA*
Ga0114898_10040085	3300008216	Deep Ocean	MPKATMHRVECLDCGKIATRMIYVDIPVHCRQCGSANLLWRPAA*
Ga0114898_10061249	3300008216	Deep Ocean	MPNRMHRVECLDCGKVAFRVIPIDIPVYCGQCGSAALMWRPV*
Ga0114898_10161011	3300008216	Deep Ocean	MANQMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWTPTA*
Ga0114898_10181024	3300008216	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPIDFPVYCLRCGSAALMWMPTA*
Ga0114898_10209124	3300008216	Deep Ocean	MTSRMHRVECLDCGLVAFRMIPIDIPVYCRQCGSAALMWRPV*
Ga0114898_10590731	3300008216	Deep Ocean	MTSRMDRVECLDCGKVAIRLRPPIDFPVYCLRCGSDALLSKPTA*
Ga0114898_11144012	3300008216	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDIPVFCLGCGSAALMWKPTA*
Ga0114898_11464223	3300008216	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMP
Ga0114898_11604032	3300008216	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWIPTA*
Ga0114898_12076922	3300008216	Deep Ocean	MPKATMHRVECLDCGKVAIRLIPIDFPVYCLGCGSAALMWVPTA*
Ga0114899_12515901	3300008217	Deep Ocean	CLDCGKVAIRLIPIDFPVYCLGCGSAALMWVPTA*
Ga0114904_10583582	3300008218	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKETA*
Ga0114904_11250571	3300008218	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWVPTA*
Ga0114905_11673302	3300008219	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDIPVFCLGCGSAALMWMPTA*
Ga0114905_12138972	3300008219	Deep Ocean	MPNATMHRVECLDCGKIAIRLVPEDIPLYCGRCGSAALMWMPTA*
Ga0114905_12929043	3300008219	Deep Ocean	MDRVECLDCGKVAIRLRPPIDFPVYCLRCGSDALVSKPTA*
Ga0114903_11055051	3300009412	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA*
Ga0114903_11285451	3300009412	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMW
Ga0114902_10162891	3300009413	Deep Ocean	MANQMHRVECLDCREVYFRVIPIDISVYCRKCGSAALMWKPA*
Ga0114902_10714332	3300009413	Deep Ocean	MPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKPTA*
Ga0114902_11654453	3300009413	Deep Ocean	MTSRMDRVECLDCGKVAIRLRPPIDFPVYCLRCGSDALLSK
Ga0114909_12044082	3300009414	Deep Ocean	MPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA*
Ga0114908_10496922	3300009418	Deep Ocean	MPKATMHRVECLDCGLVAFRMIPIDIPVYCRQCGSAALMWRPV*
Ga0114908_12110632	3300009418	Deep Ocean	MHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKETA*
Ga0114908_12391271	3300009418	Deep Ocean	LFPAGRPMTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA*
Ga0105214_1076882	3300009595	Marine Oceanic	MTLRMHRVECLDCGKVAVRLIPIDIPVYCLGCGSAALMWKETA*
Ga0114900_10237801	3300009602	Deep Ocean	MPNRMHRVECLDCGKVAFRVIPIDIPVYCGQCGSAALMW
Ga0114900_10352744	3300009602	Deep Ocean	MTSRMHRVECLDCGLVAFRMIPIDIPVYCRKCGSAALMWRPV
Ga0114900_10876433	3300009602	Deep Ocean	MANQMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWTP
Ga0114911_10492241	3300009603	Deep Ocean	MTLRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALM
Ga0114901_10068424	3300009604	Deep Ocean	MPNRMHRVECLDCGKVAFRVILIDIPVYCGQCGSAALMWRPV*
Ga0105217_1162212	3300009612	Marine Oceanic	MTSRMHRVECLDCGKVAVRLIPIDIPVYCLGCGSAALMWMPTA*
Ga0114912_11454471	3300009620	Deep Ocean	MHRVECLDCGKVAIRLIPIDFPVYCLGCGSAALMWVPTA*
Ga0114912_11487532	3300009620	Deep Ocean	CLDCGKVAIRLRPPIDFPVYCLRCGSDALLSKPTA*
Ga0105173_11142642	3300009622	Marine Oceanic	MTSRMHRVECLDCGLVAFRLIPEDIPVYCRECGSAALM
Ga0105235_1157911	3300009791	Marine Oceanic	MHRVECLDCGKVAVRLIPEDIPVYCGKCGSAALMWM
Ga0232639_14154612	3300021977	Hydrothermal Vent Fluids	MPKATMHRVECLDCGKVAVRLIPIDLPVYCLRCGSAALMWKPTA
Ga0232646_12748422	3300021978	Hydrothermal Vent Fluids	MTLRMHRVECLDCGKVAIRLIPEDIPVYCLGCGSAALMWMPTA
Ga0256747_12223082	3300023444	Hydrothermal Fe-Rich Mat	MTSRMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWMPTA
Ga0207898_10117252	3300025049	Marine	MPKATMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWMPTA
Ga0209644_10392561	3300025125	Marine	MPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA
Ga0207883_10307274	3300025216	Deep Ocean	MLKMHRVECLESDCREVYFRLIPIDIPIYCRACGSAALMWRP
Ga0207882_10289621	3300025218	Deep Ocean	WSRSMPKATMRRVECLDCGKVAIRLIPIDIPVYCGRCGSDNLMWEPTA
Ga0207882_10482942	3300025218	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPEDIPVYCLRCGSAALMWKETA
Ga0207882_10491264	3300025218	Deep Ocean	MLKMHRVECLESDCREVYFRLIPIDIPIYCRACGSAALMWR
Ga0207884_10772662	3300025236	Deep Ocean	MTLRMHRVECLDCGKVAVRLIPIDIPVYCLGCGSAAL
Ga0207908_10248994	3300025244	Deep Ocean	SGSGTTIIWSRSMPKATMHRVECLDCGKVAIRLIPEDFPVYCLRCGSAALMWKPTA
Ga0207880_10172634	3300025247	Deep Ocean	MLKMHRVECLESDCRAVYFCVIPIDIPIYCRACGSAALMWRPV
Ga0208182_10012122	3300025251	Deep Ocean	MPKATMHRVECLDCGKVAIRLIPEDIPLYCLRCGSAALMWMPTA
Ga0208182_10072135	3300025251	Deep Ocean	MANQMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWTPTA
Ga0208182_10110444	3300025251	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWIPTA
Ga0208182_10128374	3300025251	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPIDFPVYCLRCGSAALMWMPTA
Ga0208182_10135972	3300025251	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA
Ga0208182_10500362	3300025251	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDIPVYCGRCGSAALMWKPTA
Ga0207899_10545783	3300025257	Deep Ocean	MPKVTMHRVECLDCGKVAVRLIPIDIPVYCLGCGSAALMW
Ga0207895_10436331	3300025260	Deep Ocean	MTLRMHRVECLDCGKVAVRLIPEDIPLYCLRCGSAALMWKETA
Ga0207895_10437422	3300025260	Deep Ocean	MTLRMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWMPTA
Ga0207895_10464843	3300025260	Deep Ocean	PASSTSGSGITIIWSRSMPKATMHRVECLDCGKVVIRLIPEDIPLYCLRCGSAALMWMPT
Ga0208029_10033068	3300025264	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDIPVYCLRCGSAALMWKPTA
Ga0208029_10037529	3300025264	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWKPTA
Ga0208029_10092186	3300025264	Deep Ocean	MPKATMHRVECLDCGLVAFRMIPIDIPVYCRQCGSAALMWRPV
Ga0208029_10172683	3300025264	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDLPVFCLGCGSAALMWKPTA
Ga0208029_10627672	3300025264	Deep Ocean	MTSRMHRVECLDCGLVAFRMIPIDIPVYCRQCGSAALMWRPV
Ga0208179_10037378	3300025267	Deep Ocean	MPKATMHRVECLDCGKIATRMIYVDIPVHCRQCGSANLLWRPAA
Ga0208179_10129902	3300025267	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDIPVFCLGCGSAALMWKPTA
Ga0208179_10175985	3300025267	Deep Ocean	MPKATMHRVECLDCGKVAFRMIPIDIPVYCRQCGSAALMWRPV
Ga0208813_10232535	3300025270	Deep Ocean	MTLRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA
Ga0208813_10977282	3300025270	Deep Ocean	ITITWSRSMPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKPTA
Ga0208183_10581541	3300025274	Deep Ocean	ITWSRSMPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKPTA
Ga0208183_10642582	3300025274	Deep Ocean	MPNATMHRVECLDCGKIAIRLVPEDIPLYCGRCGSAALMWMPTA
Ga0208183_10685642	3300025274	Deep Ocean	MPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0208449_10152065	3300025280	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDIPVYCGRCGSAALMWKPTA
Ga0208449_10285784	3300025280	Deep Ocean	MPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKPTA
Ga0208449_11495322	3300025280	Deep Ocean	MPKATMHRVECLDCGKVAIRLVPEDIPLYCGRCGSAALMWKPTA
Ga0207881_10259242	3300025281	Deep Ocean	MPKATMHRVECLDCGKVAVRLIPIDFPVYCLRCGSAALMWKPTA
Ga0207881_10411153	3300025281	Deep Ocean	MLKMHRVECLESDCREVYFRVIPIDIPIYCRACGSAALMWRPV
Ga0208030_11126232	3300025282	Deep Ocean	MTSQMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALMWKPT
Ga0208030_11635322	3300025282	Deep Ocean	SGITTIWSRSMPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0208315_10097227	3300025286	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDIPVYCGRCGSAALMWMPTA
Ga0208315_10380344	3300025286	Deep Ocean	MTSRMHRVECLDCGKVVIRLIPEDIPLYCGRCGSAALMWKPTA
Ga0208315_10788061	3300025286	Deep Ocean	MANQMHRVECLDCGKVAIRLIPIDLPVYCLGCGSAALM
Ga0208315_11535411	3300025286	Deep Ocean	IWSRSMPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0208934_10239781	3300025293	Deep Ocean	SGSGTTIIWSRSMPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0208316_10259402	3300025296	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDLPVYCLGCGSAALMWKPTA
Ga0208181_10462814	3300025300	Deep Ocean	MTSRMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWKETA
Ga0208450_11137371	3300025301	Deep Ocean	MTSRMHRVECLDCGKVAVRLIPIDFPVYCLGCGSAALMWKPTA
Ga0208684_101039810	3300025305	Deep Ocean	MTSRMHRVECLDCGKVVIRLIPEDIPLYCGRCGSAALMW
Ga0209757_100048242	3300025873	Marine	MTLRMHRVECLDCGKIAVRLIPIDIPLYCGRCGSAALMWMPTA
Ga0209816_12673851	3300027704	Marine	MLKMHRVECLESDCREVYFRLIPIDIPIYCRACGSAAL
Ga0256381_10050192	3300028018	Seawater	MLKMHRIECLDCGKVAFRMIPIDIPVYCRECGSEALMWRPV
Ga0256381_10097444	3300028018	Seawater	MANQMHRVECLDCREVYFRVIPIDIPVYCKKCGSAALMWKSA
Ga0256381_10139111	3300028018	Seawater	TIWSRSMPKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0256381_10175804	3300028018	Seawater	MPKATMHRVECLDCGKVAIRLIPADIPLYCGRCGSAALMWMPTA
Ga0256381_10553131	3300028018	Seawater	MPKATMHRVECLDCGKVAVRLIPIDIPVFCLGCGSAALMWMP
Ga0256382_10004328	3300028022	Seawater	MPKAMMHRVECLDCGKVVIRLIPEDIPLYCGKCGSAALMWMPTA
Ga0256382_10008555	3300028022	Seawater	MLKMHRVECLESDCRVVYFRLIPIDIPIHCRSCGSAALMWRPV
Ga0256382_11099081	3300028022	Seawater	MTSRMHRVECLDCGLVAFRMIPIDIPVYCRQCGSAA
Ga0256380_10013682	3300028039	Seawater	MANQMHRVECLDCREVYFRVIPIDISVYCRKCGSAALMWKPA
Ga0256380_10154342	3300028039	Seawater	MPKATMHRVECLDCGKVAVRLIPIDIPVFCLGCGSAALMWMPTA
Ga0256380_10198411	3300028039	Seawater	GGGEGGITITWSRSMPKATMHRVECLDCGKVAVRLIPIDLPVFCLGCGSAALMWKPTA
Ga0256380_10198772	3300028039	Seawater	MPKATMHRVECLDCGLVACRMIPIDIPVYCRKCGSAALMWRPV
Ga0256380_10337574	3300028039	Seawater	EKATMHRVECLDCGKVVIRLIPEDIPVYCLRCGSAALMWKETA
Ga0256380_10388271	3300028039	Seawater	TTITWSRSMPKATMHRVECLDCGKVAIRLIPEDIPLYCLRCGSAALMWMPTA
Ga0256380_10388861	3300028039	Seawater	MPKATMHRVECLDCGKVAVRLIPIDLPVFCLGCGSAALMWKPTA
Ga0256380_10513223	3300028039	Seawater	SSTSGSGITIIWSRSMPKATMHRVECLDCGKVVIRLIPEDIPLYCGRCGSAALMWKPTA
Ga0256380_10532481	3300028039	Seawater	ASSTSGSGITTIWSRSMPKATMHRVECLDCGKVAIRLIPEDIPLYCGRCGSAALMWMPTA
Ga0256380_10681081	3300028039	Seawater	GGPMTSRMHRVECLDCGKVAVRLIPIDLPVFCLGCGSAALMWKPIA
Ga0326748_064631_399_521	3300034656	Filtered Seawater	RMHRVECLDCGKVAIRLIPEDIPVYCLRCGSAALMWKETA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067113

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences