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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F067045 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 126 |
| Average Sequence Length | 123 residues |
| Representative Sequence | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA |
| Number of Associated Samples | 108 |
| Number of Associated Scaffolds | 126 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 26.98 % |
| % of genes near scaffold ends (potentially truncated) | 40.48 % |
| % of genes from short scaffolds (< 2000 bps) | 85.71 % |
| Associated GOLD sequencing projects | 94 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (82.540 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.667 % of family members) |
| Environment Ontology (ENVO) | Unclassified (35.714 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (65.873 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 38.84% β-sheet: 15.70% Coil/Unstructured: 45.45% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 126 Family Scaffolds |
|---|---|---|
| PF02129 | Peptidase_S15 | 26.19 |
| PF08530 | PepX_C | 3.97 |
| PF02574 | S-methyl_trans | 0.79 |
| PF02104 | SURF1 | 0.79 |
| PF13692 | Glyco_trans_1_4 | 0.79 |
| PF04307 | YdjM | 0.79 |
| PF06490 | FleQ | 0.79 |
| PF13540 | RCC1_2 | 0.79 |
| PF02754 | CCG | 0.79 |
| PF07969 | Amidohydro_3 | 0.79 |
| COG ID | Name | Functional Category | % Frequency in 126 Family Scaffolds |
|---|---|---|---|
| COG2936 | Predicted acyl esterase | General function prediction only [R] | 3.97 |
| COG0247 | Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF | Energy production and conversion [C] | 0.79 |
| COG0646 | Methionine synthase I (cobalamin-dependent), methyltransferase domain | Amino acid transport and metabolism [E] | 0.79 |
| COG1988 | Membrane-bound metal-dependent hydrolase YbcI, DUF457 family | General function prediction only [R] | 0.79 |
| COG2040 | Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) | Amino acid transport and metabolism [E] | 0.79 |
| COG2048 | Heterodisulfide reductase, subunit B | Energy production and conversion [C] | 0.79 |
| COG2204 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | Signal transduction mechanisms [T] | 0.79 |
| COG3346 | Cytochrome oxidase assembly protein ShyY1 | Posttranslational modification, protein turnover, chaperones [O] | 0.79 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 82.54 % |
| All Organisms | root | All Organisms | 17.46 % |
| Visualization |
|---|
| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 16.67% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 8.73% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.56% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 5.56% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 5.56% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.56% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 4.76% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 4.76% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 4.76% |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 3.17% |
| Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 3.17% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.38% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 2.38% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.38% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.59% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.59% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.59% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.59% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.59% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.59% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.59% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.59% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.79% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.79% |
| Unplanted Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil | 0.79% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.79% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.79% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.79% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.79% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.79% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.79% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.79% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.79% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.79% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2140918007 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all | Environmental | Open in IMG/M |
| 3300000878 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina | Environmental | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300003321 | Sugarcane bulk soil Sample H1 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005560 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119 | Environmental | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300011998 | Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M | Environmental | Open in IMG/M |
| 3300012003 | Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M | Environmental | Open in IMG/M |
| 3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
| 3300012519 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610 | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013766 | Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M | Environmental | Open in IMG/M |
| 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300019887 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2 | Environmental | Open in IMG/M |
| 3300019890 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1 | Environmental | Open in IMG/M |
| 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025464 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025509 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025604 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025625 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
| 3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
| 3300027775 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes) | Environmental | Open in IMG/M |
| 3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
| 3300032074 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
| 3300034268 | Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
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| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| A_all_C_02485240 | 2140918007 | Soil | MPELMLPHLIERAATEVDGSLSGVMRTLIAAPATDAERAGERLCVFGAPLAGALAARRYRVIGERSGREYLRFTLALEDGPESLLEAFGLQLQIALNGLDASSCEELGCFRELLTAARRGVGE |
| AL9A1W_11341672 | 3300000878 | Permafrost | GGTGRGTLGRMPELMLPQLIERAATTADGSLSGVMRTLIAAPDTDAERAGERLCVFGAPLPAALAARRYRVIGERSGREYLRFTLALEDGPPSLLEAFGLQLQIALNGLDASPSEELGCFRELLAAARRGVGE* |
| C688J35102_1203434502 | 3300002568 | Soil | MGGVRTGRSVYGWGMSELMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGDLASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSDV* |
| soilH1_100905924 | 3300003321 | Sugarcane Root And Bulk Soil | MGGVRAERHVYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFQIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSET* |
| Ga0062593_1011768882 | 3300004114 | Soil | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFNIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSEA* |
| Ga0062591_1005579091 | 3300004643 | Soil | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSEA* |
| Ga0070683_1002253904 | 3300005329 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0068869_1005409062 | 3300005334 | Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0070680_1007432091 | 3300005336 | Corn Rhizosphere | MPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLA |
| Ga0070682_1013646211 | 3300005337 | Corn Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA* |
| Ga0068868_1000817363 | 3300005338 | Miscanthus Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG* |
| Ga0070660_1006722932 | 3300005339 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0070691_103006381 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0070671_1005777731 | 3300005355 | Switchgrass Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSDG* |
| Ga0070659_1003108692 | 3300005366 | Corn Rhizosphere | ERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0070709_110375451 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | REAPHVPNTGGSAAAGRDYRGGMPELMLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGKLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA* |
| Ga0070714_1006273151 | 3300005435 | Agricultural Soil | MLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGMLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA* |
| Ga0070714_1013808671 | 3300005435 | Agricultural Soil | AGPPVYGWGMPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0070713_1016292701 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGMLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLATARAEAA* |
| Ga0070710_102329702 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | RGLTPCTGDVPQLRTIRLARHRRRSAPRPHVPNTGGSPAVAPVYREGMPELMLPRLIESAATAIDGSLSGVVRTLIAAPATDAERAGERLCVFGSPAGGRLASRRFRVVGEGSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELGCFRELLAVARSGA* |
| Ga0070710_105800771 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARADA* |
| Ga0070701_105271642 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | RRRREICLHLPNMGGVREEWPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0070711_1005722051 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARVDA* |
| Ga0070694_1009067322 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | GGARAEPLLYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0070678_1005520702 | 3300005456 | Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARADA* |
| Ga0070685_105236331 | 3300005466 | Switchgrass Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0070695_1009768031 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | CLHLPNTGGSPAGPPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0070693_1000278513 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0070704_1014351242 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSEA* |
| Ga0066670_106834551 | 3300005560 | Soil | VDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLSSRRFRIVGERSGREYLTFTLALEDGPESLLEALGLQLQIALNGLDESSSDELDCFRELLAAARADA* |
| Ga0068855_1025105122 | 3300005563 | Corn Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLD |
| Ga0068856_1001545232 | 3300005614 | Corn Rhizosphere | DGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0068856_1022578591 | 3300005614 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLSSRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0068856_1026152642 | 3300005614 | Corn Rhizosphere | MGGARAEPLLYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNG |
| Ga0070702_1005452802 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG* |
| Ga0068852_1011423161 | 3300005616 | Corn Rhizosphere | DLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG* |
| Ga0068852_1016848271 | 3300005616 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSDA* |
| Ga0066903_1039445161 | 3300005764 | Tropical Forest Soil | EICLHLPNTGGSPAGAPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGHLSSRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADS* |
| Ga0068863_1016613091 | 3300005841 | Switchgrass Rhizosphere | MLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0070717_105380772 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGKLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA* |
| Ga0070716_1007739312 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | VDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGKLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA* |
| Ga0070716_1009751002 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | IRGVRRPEGRSTVGGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARADA* |
| Ga0068871_1017129842 | 3300006358 | Miscanthus Rhizosphere | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0079221_105334921 | 3300006804 | Agricultural Soil | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0079221_116261621 | 3300006804 | Agricultural Soil | MLPRLIELAATAADGSLTSVVRTLIAAPATEAERAGERLCVFGAPGGGRLASRRFRVVGDESGCEYLAFTLALEDGPESLLEAFGLQLQIALNGMEQTSCEELGCFRELLATARAEAA* |
| Ga0079220_100490103 | 3300006806 | Agricultural Soil | MGGARAEPLLYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA* |
| Ga0079220_101950042 | 3300006806 | Agricultural Soil | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLSSRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0075433_116228851 | 3300006852 | Populus Rhizosphere | GVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFNIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0075425_10000229913 | 3300006854 | Populus Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFNIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0075434_1018247112 | 3300006871 | Populus Rhizosphere | GVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSEA* |
| Ga0075426_111600551 | 3300006903 | Populus Rhizosphere | RPSASAAGRRRREFCLHLPNTGGSSAGPPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGHLASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0075424_1000038939 | 3300006904 | Populus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFNIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0075424_1009450232 | 3300006904 | Populus Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGHLASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0075424_1016666842 | 3300006904 | Populus Rhizosphere | PRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSEA* |
| Ga0079219_107883051 | 3300006954 | Agricultural Soil | APAGPPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLSSRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA* |
| Ga0105240_117736871 | 3300009093 | Corn Rhizosphere | MSELMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARAD |
| Ga0105245_100193222 | 3300009098 | Miscanthus Rhizosphere | MSDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0105243_108850562 | 3300009148 | Miscanthus Rhizosphere | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADG* |
| Ga0105241_101341223 | 3300009174 | Corn Rhizosphere | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADA* |
| Ga0134125_102008551 | 3300010371 | Terrestrial Soil | DLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFNIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0134125_102015421 | 3300010371 | Terrestrial Soil | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGSPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDC |
| Ga0134128_106330221 | 3300010373 | Terrestrial Soil | MSDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0105239_109102782 | 3300010375 | Corn Rhizosphere | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG* |
| Ga0134126_106923441 | 3300010396 | Terrestrial Soil | VVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0134126_109944091 | 3300010396 | Terrestrial Soil | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA* |
| Ga0134126_115783281 | 3300010396 | Terrestrial Soil | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYVSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSGA* |
| Ga0134127_104898962 | 3300010399 | Terrestrial Soil | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGVLAARRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS* |
| Ga0120114_10246502 | 3300011998 | Permafrost | MPELMLPQLIERAATTADGSLSGVMRTLIAAPDTDAERAGERLCVFGAPLPAALAARRYRVIGERSGREYLRFTLALEDGPPSLLEAFGLQLQIALNGLDASPSEELGCFRELLAAARRGVGE* |
| Ga0120163_10447541 | 3300012003 | Permafrost | ARGWFGRAVMSPFRGVPGETERATLERMPELMLPQLIEQAATAADGSLSGVMRTLIAAPATEAERAGERLVVFGAPLAGELAARRYRVIGARSGRQYLRFTLALEDGPESLLEAFGLQLQIALNGLDATSSEELGCFRELLTAARRGVGE* |
| Ga0137385_103634572 | 3300012359 | Vadose Zone Soil | MPELMLPGLIERAATAIDGSLSGVVRTLIAAPATDAERAGERLCVFGSPAGGWLASRRFRVVGEASGREYLTFTLALEDGPESLLEAFGLQLQIALNGMDATSCEELGCFRELLATARSGAGA* |
| Ga0157352_10938831 | 3300012519 | Unplanted Soil | VDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLSSRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGMDETSCEELGCFRELLTAAREGMAA* |
| Ga0157288_101601982 | 3300012901 | Soil | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSEA* |
| Ga0164301_105063301 | 3300012960 | Soil | AAMAVDGSLSGVVRTLIAAPATDAERAGERLCVFGSPAGGGLASRRFRVVGEGSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELGCFRELLAVARGAA* |
| Ga0164309_109835582 | 3300012984 | Soil | PRLIESAATAIDGSLSGDVRTLIAAPATDAERAGERLCVFGSPAGGRLASRRFRVVGEGSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELGCFRELLAVARSGA* |
| Ga0164304_108978252 | 3300012986 | Soil | GPPVYGWGMPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARADA* |
| Ga0164305_104818301 | 3300012989 | Soil | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPSGGELASRRFRIVGERSGREYLSFSLALEDGPESLLEAFGLQLQIALNGMDESSCDELDCFRELLAAARADA* |
| Ga0157372_1007154010 | 3300013307 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSS |
| Ga0120181_11256391 | 3300013766 | Permafrost | ATAVDGSLCGVMRTLIAAPATDAERAGERLCVFGAPLPGALAARRFRVLGQQSGHEYLRFTLALEDGPESLLEAFGLQLQIALNGLDETSCEELGCFRELLATARRGVPE* |
| Ga0182008_107650881 | 3300014497 | Rhizosphere | NMGGVRAGWPVYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSDA* |
| Ga0157377_102162462 | 3300014745 | Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG* |
| Ga0157376_115010382 | 3300014969 | Miscanthus Rhizosphere | MSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA* |
| Ga0132258_100300257 | 3300015371 | Arabidopsis Rhizosphere | VIRLTPLPDLTIPGGSRRPAAIYPEVMSELLLPGLIERAATAVDGSLSGVVRALVASPATDAERAGERLCVFGAPAGGRLVSRRFRVVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDETSCEELGCFRELLTAAREGMAA* |
| Ga0193729_11302521 | 3300019887 | Soil | MPELMLPRLIERAAADIDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGSLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDETSCEELGCFRELLTAARSA |
| Ga0193728_10456762 | 3300019890 | Soil | VAAPPDYGGGMPELMLPRLIERAAADIDGTLSLIAAPATDAERAGERLCVFGSPAGGSLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDETSCEELGCFRELLTAARSAA |
| Ga0197907_112144012 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | MGGVREEWPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA |
| Ga0206356_113892444 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS |
| Ga0206354_109935312 | 3300020081 | Corn, Switchgrass And Miscanthus Rhizosphere | GMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA |
| Ga0206353_100857741 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFR |
| Ga0206353_114068311 | 3300020082 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSEA |
| Ga0182009_105321392 | 3300021445 | Soil | MGGVRAGWPVYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSDA |
| Ga0224712_100468022 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MGGVREEWPVYGWGMPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSDA |
| Ga0208076_10659322 | 3300025464 | Arctic Peat Soil | MPDLMLPRLIERAATAVDGSLTGVMRTLISAPATDAERAGERLCVFGAPLRRTLAARRFRVVGEASGREYLRFTLALEDGPESLLEAFGLQLQIALNGVDASSSEELGCFRELLAHARGDAGGE |
| Ga0208848_10143903 | 3300025509 | Arctic Peat Soil | MPELMLPRLIERAATAVDGSLTGVMRTLISAPATDAERAGERLCVFGAPLRRTLAARRFRVVGEASGREYLRFTLALEDGPESLLEAFGLQLQIALNGVDASSSEELGCFRELLAHARGDAGGEV |
| Ga0207930_10322671 | 3300025604 | Arctic Peat Soil | ERAATAVDGSLTGVMRTLISAPATDAERAGERLCVFGATLRRTLAARRFRVVGEASGREYLRFTLALEDGPESLLEAFGLQLQIALNGVDASSSEELGCFRELLAHARGDAGGEV |
| Ga0208219_10138762 | 3300025625 | Arctic Peat Soil | MPELMLPRLIERAAAAVDGSLSGVMRTLISAPATDAERAGERLCVFGAPLQRTLAARRFRVVGEESGREYLRFTLALEDGPEALLEAFGLQLQIALNGLDASSSEELGCFRELLAQARR |
| Ga0207692_102072661 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | PGTGDVPQLRTIRLARHRRRSAPRPHVPNTGGSPAVAPVYREGMPELMLPRLIESAATAIDGSLSGVVRTLIAAPATDAERAGERLCVFGSPAGGRLASRRFRVVGEGSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELGCFRELLAVARSGA |
| Ga0207699_108380931 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | AARRHREAPHVPNTGGSAAAGRDYRGGMPELMLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGKLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA |
| Ga0207707_105149792 | 3300025912 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSDA |
| Ga0207707_107382992 | 3300025912 | Corn Rhizosphere | MPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARSD |
| Ga0207695_113525851 | 3300025913 | Corn Rhizosphere | MGGARAEPLLYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFR |
| Ga0207671_107773861 | 3300025914 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSEA |
| Ga0207693_102572022 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAAADVDGTLSGVVRTLIAAPATDAERAGERLCVFGSPAGGMLASRRFRVVGEGSGREYLTFTLALEDGPEALLEAFGLQLQIALNGLDATSCEELGCFRELLTAARAA |
| Ga0207663_103419112 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARVDA |
| Ga0207663_110311991 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | QERAAAHVPNTGGSPAVAPVYREGMPELMLPRLIESAATAIDGSLSGVVRTLIAAPATDAERAGERLCVFGSPAGGRLASRRFRVVGEGSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELGCFRELLAVARSGA |
| Ga0207694_108564762 | 3300025924 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSD |
| Ga0207687_106699841 | 3300025927 | Miscanthus Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAAR |
| Ga0207664_111477621 | 3300025929 | Agricultural Soil | HLPNTGGSPAGPPVYGWGMPDLMLPRLIERAATDIDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA |
| Ga0207665_100340053 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARAD |
| Ga0207661_110951951 | 3300025944 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFR |
| Ga0207651_110927521 | 3300025960 | Switchgrass Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARADA |
| Ga0207640_107174991 | 3300025981 | Corn Rhizosphere | MGGAPAGTPVYGWGMSDLMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARADG |
| Ga0207639_111441991 | 3300026041 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARAD |
| Ga0207702_118723062 | 3300026078 | Corn Rhizosphere | MPDLMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLSSRRFHIVGERSGREYLTFTLALEDGPESLLEAFGLQLQIALNGLDESSSEELDCFRELLAAARAD |
| Ga0207641_100540003 | 3300026088 | Switchgrass Rhizosphere | MLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGGLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAVARADS |
| Ga0207683_119012391 | 3300026121 | Miscanthus Rhizosphere | RKVTAGRCAEDEQPLAGPLGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGDLASRRFRILGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARVDA |
| Ga0207698_111472661 | 3300026142 | Corn Rhizosphere | MLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSSDELDCFRELLAAARSDA |
| Ga0207698_122450081 | 3300026142 | Corn Rhizosphere | RAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA |
| Ga0209577_103001322 | 3300026552 | Soil | MLPQLIEEAAARSEGSISAVVRLLMAAPVTDADRAGERLCVFGWPGEGPLAARRYVVVGDESGREYMRFTLALEDGPESLLEAFGLQLQIALNGLDATSCEELACFRELLVAARSGARA |
| Ga0209073_100588632 | 3300027765 | Agricultural Soil | MGGARAEPLLYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA |
| Ga0209177_104865822 | 3300027775 | Agricultural Soil | LIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGELASRRFHIVGERSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARSEA |
| Ga0308175_1007844502 | 3300031938 | Soil | MGGVRTGRSVYGWGMSELMLPRLIERAATDVDGSLTGVVRSLIADPATDAERAGERLLVFGAPAGGDLASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSDV |
| Ga0308175_1009708921 | 3300031938 | Soil | MGGARAGAPVYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPGGGDLASRRFHIVGERSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARS |
| Ga0308173_112525232 | 3300032074 | Soil | MGGVRTGRSVYGWGMSELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLLVFGAPAGGGLASRRFHIVGEGSGREYLSFTLALEDGPESLLEAFGLQLQIALNGLDESSCEELDCFRELLAAARSDA |
| Ga0307472_1001810612 | 3300032205 | Hardwood Forest Soil | MPELMLPRLIERAATDVDGSLTGVVRTLIADPATDAERAGERLVVFGAPGGGDLASRRFRILGEQSGREYLSFTLALEDGPESLLEAFGLQLQIALNGMDESSCEELDCFRELLAAARAD |
| Ga0335081_101043192 | 3300032892 | Soil | MLPRLIELAATAADGSLTSVVRALIAAPATDAERAGERLCVFGAPAGGRLASRRFRVVGDDSGREYLAFTLALEDGPESLLEAFGLQLQIALNGMEQTSCEELGCFRELLAAARAEAA |
| Ga0372943_1174410_182_511 | 3300034268 | Soil | MPELMLPQLIERAATAADGTLSGVMRTLIAAPDTDAERAGERLCVFGAPLPAALAARRYRVIGERSGREYLRFTLALEDGPESLLEAFGLQLQIALNGLDSSSSEELGCF |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |