Metagenome Family F067038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067038
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	83 residues
Representative Sequence	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCESTTPCREPATGRFENEREAESYGVDWGIGAIDQGFMEGSFFRRLS
Number of Associated Samples	88
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.22 %
% of genes near scaffold ends (potentially truncated)	34.13 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.492 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (34.127 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.61% β-sheet: 31.25% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13649	Methyltransf_25	6.35
PF07883	Cupin_2	3.97
PF02423	OCD_Mu_crystall	3.17
PF00106	adh_short	2.38
PF12680	SnoaL_2	2.38
PF09084	NMT1	2.38
PF01862	PvlArgDC	2.38
PF13557	Phenol_MetA_deg	1.59
PF02586	SRAP	1.59
PF00903	Glyoxalase	1.59
PF00141	peroxidase	0.79
PF00723	Glyco_hydro_15	0.79
PF04679	DNA_ligase_A_C	0.79
PF12681	Glyoxalase_2	0.79
PF00296	Bac_luciferase	0.79
PF08883	DOPA_dioxygen	0.79
PF00664	ABC_membrane	0.79
PF00528	BPD_transp_1	0.79
PF00211	Guanylate_cyc	0.79
PF04191	PEMT	0.79
PF13518	HTH_28	0.79
PF04342	DMT_6	0.79
PF13011	LZ_Tnp_IS481	0.79
PF00534	Glycos_transf_1	0.79
PF04392	ABC_sub_bind	0.79
PF13458	Peripla_BP_6	0.79
PF00582	Usp	0.79
PF13091	PLDc_2	0.79
PF12847	Methyltransf_18	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	3.17
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.38
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	2.38
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	2.38
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.59
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.79
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.79
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	0.79
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.79
COG3805	Aromatic ring-cleaving dioxygenase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.49 %
Unclassified	root	N/A	36.51 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.51 %
Unclassified	root	N/A	36.51 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	23.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	23.81 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.59 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	22.22 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.59 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.59 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.90 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	10.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.59 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.59 %
Roseiflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae	0.79 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.90 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	10.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.59 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.59 %
Ramlibacter aquaticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	0.79 %
Roseiflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.90 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	10.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.59 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.59 %
Kouleothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix	0.79 %
Ramlibacter aquaticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.51 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	11.90 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	10.32 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.17 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.59 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.59 %
Kouleothrix aurantiaca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	0.79 %
Ramlibacter aquaticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	0.79 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.79 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101987924	All Organisms → cellular organisms → Bacteria → Proteobacteria	6013	Open in IMG/M
3300000550\|F24TB_10193513	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300000559\|F14TC_100720915	Not Available	1244	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1038442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	692	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1000389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6412	Open in IMG/M
3300000955\|JGI1027J12803_103695426	Not Available	861	Open in IMG/M
3300003996\|Ga0055467_10187033	Not Available	634	Open in IMG/M
3300004145\|Ga0055489_10071490	Not Available	966	Open in IMG/M
3300004268\|Ga0066398_10052068	Not Available	831	Open in IMG/M
3300004281\|Ga0066397_10154585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	527	Open in IMG/M
3300004633\|Ga0066395_10222327	Not Available	999	Open in IMG/M
3300004633\|Ga0066395_10334168	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	838	Open in IMG/M
3300005289\|Ga0065704_10210881	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1109	Open in IMG/M
3300005289\|Ga0065704_10281951	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300005294\|Ga0065705_10774002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	608	Open in IMG/M
3300005332\|Ga0066388_100545632	Not Available	1789	Open in IMG/M
3300005332\|Ga0066388_101271794	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300005332\|Ga0066388_107368401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	552	Open in IMG/M
3300005445\|Ga0070708_100245029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1683	Open in IMG/M
3300005468\|Ga0070707_100643068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1023	Open in IMG/M
3300005554\|Ga0066661_10449273	Not Available	787	Open in IMG/M
3300005713\|Ga0066905_101177949	Not Available	684	Open in IMG/M
3300005713\|Ga0066905_102040613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	533	Open in IMG/M
3300005764\|Ga0066903_106816215	Not Available	593	Open in IMG/M
3300005764\|Ga0066903_106968687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300005937\|Ga0081455_10005207	All Organisms → cellular organisms → Bacteria	14306	Open in IMG/M
3300005937\|Ga0081455_10039997	All Organisms → cellular organisms → Bacteria	4139	Open in IMG/M
3300005937\|Ga0081455_11051213	Not Available	503	Open in IMG/M
3300006049\|Ga0075417_10025841	All Organisms → cellular organisms → Bacteria → Proteobacteria	2389	Open in IMG/M
3300006049\|Ga0075417_10396704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	682	Open in IMG/M
3300006173\|Ga0070716_101052107	Not Available	646	Open in IMG/M
3300006194\|Ga0075427_10031506	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006844\|Ga0075428_101310291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300006845\|Ga0075421_100283566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2020	Open in IMG/M
3300006845\|Ga0075421_102639477	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	520	Open in IMG/M
3300006847\|Ga0075431_100612684	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300006852\|Ga0075433_10422311	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300006852\|Ga0075433_11710858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300006854\|Ga0075425_100018675	All Organisms → cellular organisms → Bacteria	7551	Open in IMG/M
3300006854\|Ga0075425_100252508	Not Available	2029	Open in IMG/M
3300006854\|Ga0075425_101064279	Not Available	922	Open in IMG/M
3300006871\|Ga0075434_100121389	All Organisms → cellular organisms → Bacteria → Proteobacteria	2629	Open in IMG/M
3300006880\|Ga0075429_101249325	Not Available	648	Open in IMG/M
3300006954\|Ga0079219_10053317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Roseiflexineae → Roseiflexaceae → Kouleothrix → Kouleothrix aurantiaca	1755	Open in IMG/M
3300006969\|Ga0075419_11283173	Not Available	543	Open in IMG/M
3300009081\|Ga0105098_10211554	Not Available	900	Open in IMG/M
3300009100\|Ga0075418_13171101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300009131\|Ga0115027_11235258	Not Available	599	Open in IMG/M
3300009147\|Ga0114129_11910722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	720	Open in IMG/M
3300009147\|Ga0114129_13256906	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300009157\|Ga0105092_10079457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1784	Open in IMG/M
3300009157\|Ga0105092_10084468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1731	Open in IMG/M
3300009157\|Ga0105092_10110283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1514	Open in IMG/M
3300009162\|Ga0075423_10383478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1474	Open in IMG/M
3300009792\|Ga0126374_10343226	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009792\|Ga0126374_10652051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	785	Open in IMG/M
3300010043\|Ga0126380_10471240	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300010043\|Ga0126380_10903567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	734	Open in IMG/M
3300010043\|Ga0126380_11477107	Not Available	601	Open in IMG/M
3300010043\|Ga0126380_12124660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300010046\|Ga0126384_10045346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter aquaticus	3001	Open in IMG/M
3300010046\|Ga0126384_10844024	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300010046\|Ga0126384_10947926	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010047\|Ga0126382_10439506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1030	Open in IMG/M
3300010048\|Ga0126373_10321453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1550	Open in IMG/M
3300010359\|Ga0126376_11732180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	661	Open in IMG/M
3300010359\|Ga0126376_11888951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	637	Open in IMG/M
3300010361\|Ga0126378_12044444	Not Available	653	Open in IMG/M
3300010362\|Ga0126377_10164959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2094	Open in IMG/M
3300010362\|Ga0126377_12067159	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	646	Open in IMG/M
3300010366\|Ga0126379_10175129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300010366\|Ga0126379_12550690	Not Available	609	Open in IMG/M
3300010398\|Ga0126383_11373167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300010398\|Ga0126383_11485264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	767	Open in IMG/M
3300010999\|Ga0138505_100075304	Not Available	502	Open in IMG/M
3300011398\|Ga0137348_1096518	Not Available	512	Open in IMG/M
3300012160\|Ga0137349_1026344	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300012202\|Ga0137363_10067413	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300012203\|Ga0137399_11350008	Not Available	598	Open in IMG/M
3300012205\|Ga0137362_11195105	Not Available	645	Open in IMG/M
3300012353\|Ga0137367_10406120	Not Available	965	Open in IMG/M
3300012353\|Ga0137367_10986109	Not Available	576	Open in IMG/M
3300012361\|Ga0137360_10269332	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300012582\|Ga0137358_10121976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	1771	Open in IMG/M
3300012685\|Ga0137397_10216147	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300012685\|Ga0137397_10389549	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300012922\|Ga0137394_10220913	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300012930\|Ga0137407_11700772	Not Available	601	Open in IMG/M
3300012948\|Ga0126375_10240501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1219	Open in IMG/M
3300012948\|Ga0126375_10256729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1187	Open in IMG/M
3300012948\|Ga0126375_10502003	Not Available	905	Open in IMG/M
3300012948\|Ga0126375_10874851	Not Available	719	Open in IMG/M
3300012971\|Ga0126369_10399018	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300014254\|Ga0075312_1093096	Not Available	620	Open in IMG/M
3300014270\|Ga0075325_1109031	Not Available	662	Open in IMG/M
3300014317\|Ga0075343_1109036	Not Available	641	Open in IMG/M
3300015245\|Ga0137409_11579662	Not Available	507	Open in IMG/M
3300015264\|Ga0137403_10040787	All Organisms → cellular organisms → Bacteria	4845	Open in IMG/M
3300015373\|Ga0132257_100001515	All Organisms → cellular organisms → Bacteria	20383	Open in IMG/M
3300016341\|Ga0182035_11400368	Not Available	628	Open in IMG/M
3300016387\|Ga0182040_10092979	Not Available	2024	Open in IMG/M
3300018052\|Ga0184638_1199739	Not Available	704	Open in IMG/M
3300018053\|Ga0184626_10000231	All Organisms → cellular organisms → Bacteria	15524	Open in IMG/M
3300018053\|Ga0184626_10131705	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300018072\|Ga0184635_10017615	All Organisms → cellular organisms → Bacteria → Proteobacteria	2584	Open in IMG/M
3300018072\|Ga0184635_10034649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1911	Open in IMG/M
3300018075\|Ga0184632_10212914	Not Available	850	Open in IMG/M
3300018075\|Ga0184632_10231217	Not Available	810	Open in IMG/M
3300018081\|Ga0184625_10180844	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300018081\|Ga0184625_10200373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1046	Open in IMG/M
3300018081\|Ga0184625_10289625	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300019789\|Ga0137408_1117345	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300021560\|Ga0126371_10196843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2108	Open in IMG/M
3300021560\|Ga0126371_10494167	Not Available	1371	Open in IMG/M
3300025939\|Ga0207665_11084717	Not Available	638	Open in IMG/M
3300027722\|Ga0209819_10024970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2000	Open in IMG/M
3300027765\|Ga0209073_10175030	Not Available	805	Open in IMG/M
3300027873\|Ga0209814_10022667	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556	Open in IMG/M
3300027873\|Ga0209814_10185471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	897	Open in IMG/M
3300027880\|Ga0209481_10720180	Not Available	518	Open in IMG/M
3300031573\|Ga0310915_10973595	Not Available	593	Open in IMG/M
3300031716\|Ga0310813_10212850	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300032001\|Ga0306922_11166442	Not Available	786	Open in IMG/M
3300032174\|Ga0307470_10058937	All Organisms → cellular organisms → Bacteria → Proteobacteria	2012	Open in IMG/M
3300032180\|Ga0307471_100345088	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300032205\|Ga0307472_100934310	Not Available	806	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.90%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	15.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.46%
Sediment	Environmental → Aquatic → Sediment	9.52%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Marine	Environmental → Aquatic → Marine	1.59%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.46%
Loam	Environmental → Terrestrial → Soil → Loam	13.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.52%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.38%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.38%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1019879241	3300000364	Soil	DRDPENNLFRALITIETSPGPVYFESAIPCHEPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
F24TB_101935131	3300000550	Soil	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCFEPATGRFKNEREAESYGVKWGIGAIDRGFMAGSFSRRLP*
F14TC_1007209152	3300000559	Soil	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESTTPCREPATGRFENEVEAESDGVKWGIGAIDQGFMEGRFSRRL*
AP72_2010_repI_A01DRAFT_10384421	3300000579	Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPIYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
AF_2010_repII_A01DRAFT_100038911	3300000580	Forest Soil	MERYHRSYRIISRSDRDPENNLFRALITIETSGNVYSENTTPCYEPAAGQFKNEREAESYGVEWGLRAIDQGFMAATFYRRLP*
JGI1027J12803_1036954262	3300000955	Soil	DYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESTTPCCEPTTGRFENEREAESCGVEWGIGAIDQGFMEGRFSRRL*
Ga0055467_101870331	3300003996	Natural And Restored Wetlands	MNYYHKSYRIISRSDRDPENKLFRALITIETCPGPVYIENITPCLEPAAGRFESEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0055489_100714902	3300004145	Natural And Restored Wetlands	MNYYHKSFRIISRPDRDPENKLFRALITIETCPGPVYIENIAPCLEPAAGQFDSEREAESHGIEWGIVAIDQGFMEGRFFRRL*
Ga0066398_100520682	3300004268	Tropical Forest Soil	MERYHRSYRIISRSDRDPENDLFRALITIETSGHVYCETTTACYEPETGQFKNEREAESYGVEWGLRAVDQGFMAGTFYRRLP*
Ga0066397_101545852	3300004281	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0066395_102223271	3300004633	Tropical Forest Soil	MERYHRSYRIISRSDRDPENDLFRALITIETSGHVYCETTTACYEPETGQFKNEREAESYGVEWGLRAIDQGFMAGTFYRRLP*
Ga0066395_103341681	3300004633	Tropical Forest Soil	SYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0065704_102108812	3300005289	Switchgrass Rhizosphere	MDYYHKSYRIISRSDRDPENNLFRALITIETSRGPVYCESITPCREPVAGRFENEREAESHGVEWGIGAIDQGYMEGRFFRRL*
Ga0065704_102819512	3300005289	Switchgrass Rhizosphere	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCFEPATGRFKNEREAESYGVKWGIGAIDRGFMAG
Ga0065705_107740021	3300005294	Switchgrass Rhizosphere	YRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP*
Ga0066388_1005456325	3300005332	Tropical Forest Soil	MDYYHKSYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPVAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0066388_1012717941	3300005332	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYCENTTPCCEPAKGRFKNEQEAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0066388_1073684012	3300005332	Tropical Forest Soil	SDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0070708_1002450293	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDYYHKSYRIISRSDRDPENSLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0070707_1006430681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MERYYKSYRIISRSDRDPENNLFRAVITIETSPGPVYCENTAPCFEPATGRFKNEREAESYGVEWGTGAINQGFMEGSFYRRLP*
Ga0066661_104492731	3300005554	Soil	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0066905_1011779492	3300005713	Tropical Forest Soil	GIGKGTIVMERYHKSYRIISRSDRDPENSLFRALVTIETSPGPVYFESTTPCREPAKGRFKSEGEAESYGVEWGIGAIDQGFMDGRFSRRL*
Ga0066905_1020406131	3300005713	Tropical Forest Soil	MERYHKSYRIISRSERDPENNLFRALVTIETSLGPVYCENTTPCCEPTKGRFTNEREAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0066903_1068162152	3300005764	Tropical Forest Soil	AYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0066903_1069686871	3300005764	Tropical Forest Soil	YRIISRSDRDPENNLFRALVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQVFMEVSFSRRLP*
Ga0081455_1000520711	3300005937	Tabebuia Heterophylla Rhizosphere	MERYHKSYRIISRSDRDPENNLFRALVTIETSLGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0081455_100399973	3300005937	Tabebuia Heterophylla Rhizosphere	MNYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYIDNGTPCLEPAAGQFENEREAESHGVEWGIVAIDQGFMEGKFFRRLS*
Ga0081455_110512131	3300005937	Tabebuia Heterophylla Rhizosphere	IISRADRDTENKLFRALITIETSPGPIYYENTTAWLEPPAGGFENEHEAESFGVEWGIVAIDQGFMEGRFFRRLSRSQ*
Ga0075417_100258412	3300006049	Populus Rhizosphere	MDYYHKAYRIISRSDRDPDNNLFRALVTIEISPGPVYFESTIPCCEPEMGRFKNEREAESYGVKWGIGAIDRGFMAGSFSRRLA*
Ga0075417_103967041	3300006049	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFSR
Ga0070716_1010521072	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FMDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0075427_100315063	3300006194	Populus Rhizosphere	MDYYHKAYRIISRSDRDPDNNLFRALVTIEISPGPVYFESTIPCCEPEMGRFKNEREAESYGVKWGIGAIDRGFMAGSFSRRLP*
Ga0075428_1013102912	3300006844	Populus Rhizosphere	MDHYHKSYRIIPRPDRDLENNLFRALITIETSPGPVYFESTTPCREPTTGRFENEREAESCGVEWGIGAIDQGFMEGRFSRRL*
Ga0075421_1002835661	3300006845	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRF
Ga0075421_1026394772	3300006845	Populus Rhizosphere	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCFEPATGRFKNEREAESYGVKWGIGAIDRGFMAGSFS
Ga0075431_1006126842	3300006847	Populus Rhizosphere	MDYYHKSYRIISRSDRDQENKLFRALITIETSPGPVYFESTTPCREPTTGRFENEREAESCGVEWGIGAIDQGFMEGRFIRRL*
Ga0075433_104223111	3300006852	Populus Rhizosphere	MERYHKSYRILSRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP*
Ga0075433_117108581	3300006852	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFSRRL*
Ga0075425_1000186751	3300006854	Populus Rhizosphere	IGKGIIAMDYYHKSYRIISRSDRDPENKLFRALITIETSPGPIYSENTTPCLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0075425_1002525082	3300006854	Populus Rhizosphere	MERYYKSYRIISRSDRDPENNLFRAVITIETSPGPVYCENTTPCFEPATGRFKNEREAESYGVEWGTGAINQGFMEGSFYRRLP*
Ga0075425_1010642792	3300006854	Populus Rhizosphere	MDYYHKSYRIISRSDRDQENKLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFSRRL*
Ga0075434_1001213892	3300006871	Populus Rhizosphere	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPIYSENTTPCLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0075429_1012493252	3300006880	Populus Rhizosphere	MERYHKSYRIISRSDRDTENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP*
Ga0079219_100533173	3300006954	Agricultural Soil	MDYYHKSYRIISRSDRDPENELFRALITIEKSPGPVYIERTTPCLELAAGRSANEREAVSYGIEWGIVAIDQGFMEGRFFRRL*
Ga0075419_112831731	3300006969	Populus Rhizosphere	MDYYHKAYRIISRSDRDQENKLFRALITIETSPGPVYFESTTPCREPTTGRFENEREAESYGVKWGIGAIDQGFIEGRFSRRLS*
Ga0105098_102115541	3300009081	Freshwater Sediment	TRGPFFLDRSPCLAIYLPGIGKGAIVMERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYFESTTPCREPATGRFENEGEAESYGVKWGIGAIDQGFMDGRFSRRL*
Ga0075418_131711011	3300009100	Populus Rhizosphere	RSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFSRRL*
Ga0115027_112352581	3300009131	Wetland	MERYHKSYRIISRSDRDPENNLFRALITIETSPGQVYCENTTPCFEPATGRFKNEREAESYGVEWGIGAIDC
Ga0114129_119107221	3300009147	Populus Rhizosphere	RMERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYCENTTPCCEPAMGRFKNEREAESYGVEWGIGAINQGFMEVSFSRRLP*
Ga0114129_132569061	3300009147	Populus Rhizosphere	RIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFSRRL*
Ga0105092_100794572	3300009157	Freshwater Sediment	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYFESTTPCREPATGRFENEGEAESYGVKWGIGAIDQGFMDGRFSRRL*
Ga0105092_100844682	3300009157	Freshwater Sediment	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESTTPCREPATGRFENEGEAESYGVKWGIGAIDQGFMDGRFSRRL*
Ga0105092_101102831	3300009157	Freshwater Sediment	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYFESTTPCREPAKGRFKNKGEAESYGVEWGIGAIDQGFMDGRFSRRL*
Ga0075423_103834782	3300009162	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPTTGRFENEREAESCGVEWGIGAIDQGF
Ga0126374_103432262	3300009792	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126374_106520511	3300009792	Tropical Forest Soil	MERYHKSYRIISRSDRDPGNNLFRALVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126380_104712402	3300010043	Tropical Forest Soil	MPGDITRDGREDHRMERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126380_109035671	3300010043	Tropical Forest Soil	KSYRIISRSDRDPENNLFRALVTIETSPGPVYCENTTPCCEPAKGRFKHEQEAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0126380_114771072	3300010043	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETGPGPVYYENTTPCCEPAMGRFKNEREAELYGVEWGIGAINQGFMEVSFS
Ga0126380_121246601	3300010043	Tropical Forest Soil	AMEGRNHRMERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYYENTTPCCEPATGRFKNKHEAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126384_100453461	3300010046	Tropical Forest Soil	MERYHKSYRIVSRSDRDPYNNLFRALITVETSLGPVYCENATPCYEPATGQFKNEVEAESYGVEWGLRAIDQGFIAGTFYRRLP*
Ga0126384_108440242	3300010046	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFS
Ga0126384_109479261	3300010046	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFGNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126382_104395062	3300010047	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYCENTTPCCEPAKGRFKHEQEAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0126373_103214532	3300010048	Tropical Forest Soil	MDYYHKSYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0126376_117321801	3300010359	Tropical Forest Soil	PENNLFRALVTIETSPGPVYCENTTPCCEPAKGRFKNEQEAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0126376_118889511	3300010359	Tropical Forest Soil	RNHRMERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126378_120444441	3300010361	Tropical Forest Soil	MERYHKSYRIVSRSDRDPYNNLFRALITVETSLGPVYCENATPCYEPATGQFKNEVEAESYGVEWGLRAIDQGFMAGTFYRRLL*
Ga0126377_101649593	3300010362	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYCENTTPCCEPAKGRFKNEHEAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0126377_120671592	3300010362	Tropical Forest Soil	DPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126379_101751292	3300010366	Tropical Forest Soil	MDYYHKSYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPSVGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0126379_125506902	3300010366	Tropical Forest Soil	MERYHKSYRIVSRSDRDPYNNLFRALITVETSLGPVYCENATPCYEPATGQFKNEVEAESYGVEWGLQAIDQGFIAGTFYRRLP*
Ga0126383_113731671	3300010398	Tropical Forest Soil	VTCLQRRIFSLTRTMPGDITRDGREDHRMERYHKSYRIISRSDRDPENNLFRALVTIETSPGPIYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126383_114852642	3300010398	Tropical Forest Soil	MERYHKSYRIISRSDRDPENDLFRALVTIETSPGPVYWENTTPCCEPATGQFKNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0138505_1000753041	3300010999	Soil	RNHRMERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNRHEAESYGVEWGLGAIDQGFMEVSFSRRLP*
Ga0137348_10965182	3300011398	Soil	SYRIISRSDRDTENKLFRALITIETSPGPVYCENTTPCREPATGRFKNEREAESYGVEWGMGAIDQGFMEGNFYRRLP*
Ga0137349_10263441	3300012160	Soil	MDYYHKSYRIISRSDRDPENNLFRALITIETSLGPVYFESTTPCRAPVAGRFENEREAESYGVKWGTGAIDQGFIEGRFSRRLS*
Ga0137363_100674134	3300012202	Vadose Zone Soil	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0137399_113500081	3300012203	Vadose Zone Soil	YRIISRSDRDPENKLFRALITIETSPGPVYFESITPCREPAMGRFEKEREAESYGVEWGIGAIDQGFMDVRFSRRL*
Ga0137362_111951051	3300012205	Vadose Zone Soil	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYLESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0137367_104061202	3300012353	Vadose Zone Soil	MDHYHKSYHIISRSDRDPENNLFRALITIETSPGPVYFESTTPCREPTTGRFENEREAESYGVKWGIGAVDQGFIEGRFFRRL*
Ga0137367_109861092	3300012353	Vadose Zone Soil	DYYHKAYRIISRSDRDPDNNLFRALVTIEISPGPVYFESTIPCCEPEMGRFKNEREAESYGVKWGIGAIDRGFMAGSFSRRLA*
Ga0137360_102693322	3300012361	Vadose Zone Soil	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESAIPCHEPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0137358_101219763	3300012582	Vadose Zone Soil	MDHYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP*
Ga0137397_102161472	3300012685	Vadose Zone Soil	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESYGVEWGIGAIDQGFIEGRFSRRL*
Ga0137397_103895492	3300012685	Vadose Zone Soil	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSF
Ga0137394_102209131	3300012922	Vadose Zone Soil	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP*
Ga0137407_117007721	3300012930	Vadose Zone Soil	MDYYHKAYRIISRSDRDPDNNLFRALVTIEISPGPVYFESTIPCCEPEMGRFKNEREAESYGVKWGIGAINRGFMAGSFSRRLA*
Ga0126375_102405012	3300012948	Tropical Forest Soil	MEHYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP*
Ga0126375_102567292	3300012948	Tropical Forest Soil	MPGGITRDVRGTIEMERYHKSYRIISRSERDPENNLFRALVTIETSLGPVYCENTTPCCEPTKGRFTNEREAELYGVEWGLGAINQGFMEVSFSRRLP*
Ga0126375_105020032	3300012948	Tropical Forest Soil	ERYHKSYCIVSRSDRDPDNNLFRALITVETSLGPVYCENTTPCYEPATGQFKNEVEAESYGVEWGLRAIDQGFIAGTFYRRLP*
Ga0126375_108748512	3300012948	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRAVVTIETSPGPVYWENTTPCCEPATGRFKNEREAELYGVEWGMGAINQGFMEVSFSRRLP*
Ga0126369_103990182	3300012971	Tropical Forest Soil	MDYYHKSYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPSLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0075312_10930961	3300014254	Natural And Restored Wetlands	DRDPENKLFRALITIETCPGPVYIENITPCLEPVAGRFESEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0075325_11090312	3300014270	Natural And Restored Wetlands	MNYYHKSYRIISRSDRDPENKLFRALITIETCPGPVYIENVTPCLEPAAGRFESEREAESYGVEWGIVAIDQGFMEGRFFRRL*
Ga0075343_11090362	3300014317	Natural And Restored Wetlands	MNYYHKSFRIISRPDRDPENKLFRALITIETCPGPVYIENIAPCLEPAAGQFDSEREAESHGIEWGIVAIDQGFMEGRFFR
Ga0137409_115796621	3300015245	Vadose Zone Soil	MDYYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESTIPCREPATGRFENEREAESYGVEWGIGAIDQGFIEGRFSRRL*
Ga0137403_100407875	3300015264	Vadose Zone Soil	MDHYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESTTPCREPATGRLENEREAESYGVEWGIGAIDQGFIEGRFSRRL*
Ga0132257_1000015155	3300015373	Arabidopsis Rhizosphere	MDYYHKAYRIISRSDRDPENNLFRALITIEASPGPVYCENTTPCREPLTGRFENEREAESYGVEWGISAIDQGFMDVRF*
Ga0182035_114003681	3300016341	Soil	HKSYRIISRSDRDPENNLFRALISIETSPGPVYFESVIPCREPERGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP
Ga0182040_100929792	3300016387	Soil	MDYYHKSYRIISRSDRDPENNLFRALISIETSPGPVYFESVIPCREPERGRFKDEREAESYGVKWGIGAIDQGFMEGRFFRRL
Ga0184638_11997391	3300018052	Groundwater Sediment	RMERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNEREAESYGVEWGMGAIDQGFMEGNFYRRLP
Ga0184626_1000023117	3300018053	Groundwater Sediment	MERYHKSYRIICRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNEREAESYGVEWGMGAIDQGFMEGNFYRRLP
Ga0184626_101317052	3300018053	Groundwater Sediment	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCESTTPCREPATGRFENEREAESYGVDWGIGAIDQGFMEGSFFRRLS
Ga0184635_100176154	3300018072	Groundwater Sediment	MERYHKSYRIISRSDRDPENNLFRALITIETSREPVYCENTTPCFEPATGRFKNEREAESYGVERGMGAINQGFMEGSFYRRLP
Ga0184635_100346492	3300018072	Groundwater Sediment	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESTIPCREPATGRFENAREAESYGVEWGIGAIDQGYMEGRFFRRL
Ga0184632_102129142	3300018075	Groundwater Sediment	MERYHKSYRIICRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNEREAESYGVERGMGAINQGFMEGSFYRRLP
Ga0184632_102312172	3300018075	Groundwater Sediment	MDYYRKSYRIISRSDRDPENNLFRALITIETSPGPVYCESTTPCREPATGRFENERGAESYGVDWGIGAIDQGFMEGRFFRRLS
Ga0184625_101808442	3300018081	Groundwater Sediment	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCESTTPCREPATGRFENAREAESYGVEWGIGAIDQGFMEGSFFRRLS
Ga0184625_102003731	3300018081	Groundwater Sediment	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESTTPCREPVAGRFENEREAESYGVECGIGAIDQGYMEGRFFRRL
Ga0184625_102896251	3300018081	Groundwater Sediment	MDYYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCESTTPCREPATGRFENAREAESYGVKWGIGAIDQGFMEGRFSRRL
Ga0137408_11173451	3300019789	Vadose Zone Soil	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP
Ga0126371_101968432	3300021560	Tropical Forest Soil	MERYHKSYRIISRSDRDPENNLFRALVTIETSPGPVYWENTTPCCEPATGRFRNEREAELYGVEWGIGAINQGFMEVSFSRRLP
Ga0126371_104941672	3300021560	Tropical Forest Soil	MDYYHKSYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPVAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL
Ga0207665_110847171	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YYHKSYRIISRSDRDPENKLFRALITIETSPGPVYFESAIPCREPETGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP
Ga0209819_100249703	3300027722	Freshwater Sediment	MERYHKSYRIISRSDRDPENNLFRALITIETSPGPVYFESTTPCREPATGRFENEGEAESYGVKWGIGAIDQGFMDGRFSRRL
Ga0209073_101750301	3300027765	Agricultural Soil	MDYYHKSYRIISRSDRDPENELFRALITIEKSPGPVYIERTTPCLEPAAGRFDNEREAESYGIEWGIVAIDQGFMEGRFFRRL
Ga0209814_100226672	3300027873	Populus Rhizosphere	MDYYHKAYRIISRSDRDPDNNLFRALVTIEISPGPVYFESTIPCCEPEMGRFKNEREAESYGVKWGIGAIDRGFMAGSFSRRLA
Ga0209814_101854712	3300027873	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESSGVKWGIGAIDQGFMEGRFIRRL
Ga0209481_107201801	3300027880	Populus Rhizosphere	MDHYHKSYRIISRPDRDLENNLFRALITIETSPGPVYFESTTPCREPATGRFENEREAESCGVEWGIGAI
Ga0310915_109735951	3300031573	Soil	MDYYHKSYRIISRSDRDPENNLFRALISIETSPGPVYFESVIPCREPERGRFKDEREAESYGVKWGIGAIDQGFMEGSFFRRLP
Ga0310813_102128501	3300031716	Soil	MDYYHKSYRIISRSDRDPENKLFRALITIEASPGPIYNENTTPCLEPAAGRFENEREAESYGVEWGMMAIDQGFMEGRFFRRL
Ga0306922_111664422	3300032001	Soil	MDYYHKAYRIISRSDRDPENKLFRARITIETSPGPVYSENTTPCLEPAAGRFENEREAESYGVEWGIVAIDQGFMEGRFFRRL
Ga0307470_100589371	3300032174	Hardwood Forest Soil	RDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP
Ga0307471_1003450882	3300032180	Hardwood Forest Soil	MERYHKSYRILSRSDRDPENNLFRALITIETSPGPVYCENTTPCREPATGRFKNKHEAESYGVEWGLGAIDQGFMEVSFSRRLP
Ga0307472_1009343101	3300032205	Hardwood Forest Soil	MERYYKSYRIISRSDRDPENNLFRAVITIETSPGPVYCENTTPCFEPATGRFKNEREAESYGVEWGTGAINQGFMEGSFYRRLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences