Metagenome / Metatranscriptome Family F066992

Basic Information
Family ID	F066992
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	89 residues
Representative Sequence	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Number of Associated Samples	118
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.17 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	73.81 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.492 % of family members)
Environment Ontology (ENVO)	Unclassified (45.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.44% β-sheet: 25.56% Coil/Unstructured: 60.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00368	HMG-CoA_red	48.41
PF01266	DAO	27.78
PF02882	THF_DHG_CYH_C	3.97
PF00202	Aminotran_3	1.59
PF07452	CHRD	1.59
PF00528	BPD_transp_1	1.59
PF00763	THF_DHG_CYH	0.79
PF02016	Peptidase_S66	0.79
PF00155	Aminotran_1_2	0.79
PF02686	Glu-tRNAGln	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1257	Hydroxymethylglutaryl-CoA reductase	Lipid transport and metabolism [I]	48.41
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	4.76
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	3.97
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	0.79
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.46 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.29 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.76 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_110366219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1438	Open in IMG/M
3300001686\|C688J18823_10100946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2004	Open in IMG/M
3300002244\|JGI24742J22300_10130814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300004479\|Ga0062595_100700461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300005162\|Ga0066814_10018810	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005164\|Ga0066815_10025360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300005176\|Ga0066679_10706153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300005177\|Ga0066690_10732373	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005178\|Ga0066688_10583150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300005327\|Ga0070658_11192991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300005329\|Ga0070683_101004353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300005330\|Ga0070690_100046152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2769	Open in IMG/M
3300005335\|Ga0070666_10123343	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300005344\|Ga0070661_101434935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005345\|Ga0070692_10212930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1138	Open in IMG/M
3300005354\|Ga0070675_100378058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300005355\|Ga0070671_100699953	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005364\|Ga0070673_100168386	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005366\|Ga0070659_100156826	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300005406\|Ga0070703_10169004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300005438\|Ga0070701_10008851	All Organisms → cellular organisms → Bacteria	4377	Open in IMG/M
3300005440\|Ga0070705_100125781	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300005445\|Ga0070708_101613574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300005458\|Ga0070681_11665882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300005467\|Ga0070706_101141208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300005530\|Ga0070679_101462685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005539\|Ga0068853_100409315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300005543\|Ga0070672_100062441	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300005545\|Ga0070695_100029890	All Organisms → cellular organisms → Bacteria	3388	Open in IMG/M
3300005559\|Ga0066700_10525481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300005561\|Ga0066699_11132765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300005563\|Ga0068855_100639478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300005575\|Ga0066702_10354803	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005578\|Ga0068854_102125408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300005718\|Ga0068866_10033497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2493	Open in IMG/M
3300006175\|Ga0070712_100385519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1154	Open in IMG/M
3300006573\|Ga0074055_11862793	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300006574\|Ga0074056_11824713	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006575\|Ga0074053_10013769	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300006579\|Ga0074054_12172895	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300006579\|Ga0074054_12175254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300006580\|Ga0074049_12937691	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006581\|Ga0074048_10018477	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006605\|Ga0074057_12329312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300006606\|Ga0074062_12959254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300006800\|Ga0066660_10338675	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300009012\|Ga0066710_101105876	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300009090\|Ga0099827_10006230	All Organisms → cellular organisms → Bacteria	7290	Open in IMG/M
3300009101\|Ga0105247_10176537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300009176\|Ga0105242_10089446	All Organisms → cellular organisms → Bacteria	2588	Open in IMG/M
3300009176\|Ga0105242_10859681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300009551\|Ga0105238_11639427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300009801\|Ga0105056_1028396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300009815\|Ga0105070_1057679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300009818\|Ga0105072_1036485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300010039\|Ga0126309_10044511	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300010039\|Ga0126309_10412840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300010371\|Ga0134125_10415632	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300010373\|Ga0134128_10509097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300010373\|Ga0134128_10793599	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300010396\|Ga0134126_12228647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300010400\|Ga0134122_13213694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300011106\|Ga0151489_1236735	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300011107\|Ga0151490_1088391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300012200\|Ga0137382_10419031	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012204\|Ga0137374_10027985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6225	Open in IMG/M
3300012204\|Ga0137374_10049646	All Organisms → cellular organisms → Bacteria	4338	Open in IMG/M
3300012350\|Ga0137372_10341996	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300012355\|Ga0137369_10005055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13432	Open in IMG/M
3300012358\|Ga0137368_10575791	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012360\|Ga0137375_10089321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3181	Open in IMG/M
3300012532\|Ga0137373_10005477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13704	Open in IMG/M
3300012951\|Ga0164300_10088120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300012955\|Ga0164298_10062774	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300012957\|Ga0164303_10060370	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300012958\|Ga0164299_10007174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3910	Open in IMG/M
3300012960\|Ga0164301_10154706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300012960\|Ga0164301_10279657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300012961\|Ga0164302_10691779	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012985\|Ga0164308_10046843	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300013296\|Ga0157374_10022219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5657	Open in IMG/M
3300013306\|Ga0163162_10023656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6066	Open in IMG/M
3300013306\|Ga0163162_10493259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300014969\|Ga0157376_10077628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2841	Open in IMG/M
3300017792\|Ga0163161_10801233	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300017997\|Ga0184610_1244914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300018027\|Ga0184605_10104341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300018051\|Ga0184620_10010282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2107	Open in IMG/M
3300018052\|Ga0184638_1000407	All Organisms → cellular organisms → Bacteria	11956	Open in IMG/M
3300018053\|Ga0184626_10004782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5100	Open in IMG/M
3300018061\|Ga0184619_10155221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300018073\|Ga0184624_10525291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300019869\|Ga0193705_1003815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300020016\|Ga0193696_1009632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2640	Open in IMG/M
3300020059\|Ga0193745_1048786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300022534\|Ga0224452_1004808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3273	Open in IMG/M
3300022756\|Ga0222622_10005747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5594	Open in IMG/M
3300025885\|Ga0207653_10085439	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300025898\|Ga0207692_10656127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300025910\|Ga0207684_10952844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300025912\|Ga0207707_10959884	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300025926\|Ga0207659_10755741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300025939\|Ga0207665_10073094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2344	Open in IMG/M
3300025941\|Ga0207711_11185556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300025972\|Ga0207668_10314628	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300026041\|Ga0207639_10337325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1343	Open in IMG/M
3300026527\|Ga0209059_1137492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300026552\|Ga0209577_10234583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300026995\|Ga0208761_1018057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300027056\|Ga0209879_1027343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	947	Open in IMG/M
3300027288\|Ga0208525_1026495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300027561\|Ga0209887_1001264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7709	Open in IMG/M
3300027821\|Ga0209811_10004721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4385	Open in IMG/M
3300027882\|Ga0209590_10005020	All Organisms → cellular organisms → Bacteria	5690	Open in IMG/M
3300027952\|Ga0209889_1064003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	757	Open in IMG/M
3300028381\|Ga0268264_10449940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1247	Open in IMG/M
3300028708\|Ga0307295_10011405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2111	Open in IMG/M
3300028714\|Ga0307309_10052123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300028878\|Ga0307278_10151546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1038	Open in IMG/M
3300028881\|Ga0307277_10496969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300031170\|Ga0307498_10000823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4338	Open in IMG/M
3300031455\|Ga0307505_10094630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300031740\|Ga0307468_100240525	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300031740\|Ga0307468_101621901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300032174\|Ga0307470_10340770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300032180\|Ga0307471_100659740	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.57%
Host-Associated	Host-Associated	21.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	21.43%
Aquatic	Environmental → Aquatic	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.94%
Sediment	Environmental → Aquatic → Sediment	7.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.38%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Sand	Environmental → Terrestrial → Soil → Sand	4.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.76%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1103662193	3300000956	Soil	MLAIKDGRFLREVGLTGGCRAVAAPKGQDGAWQACDPGKLQGAPNLTRQSCKSVMVVGRTEYWQCPAGIEAGPGS*
C688J18823_101009461	3300001686	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSRKPS*
JGI24742J22300_101308141	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	DNRGMRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0062595_1007004611	3300004479	Soil	NASNADKEEVRGVLVAAILIVALMVAVKDGRVLRNTGLTGGCHAVATPAGDDGAWHACDRGKLQGAPDLTRQGCKSTKVVGKTEYWRCPAAIESSNQTPSG*
Ga0066814_100188102	3300005162	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVHVVGETEYWRCPAAIKSSHKPS*
Ga0066815_100253602	3300005164	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWHCPAAIKSSHKPS*
Ga0066679_107061532	3300005176	Soil	MRGVLIGAVLIFVLMVAIKDGRFLHQAGLTGGCRAVAAPAGQTGHWQACDPGSLQGAPDLTRQGCKSVGLVGKTEYWRCPAPIQGGPGS*
Ga0066690_107323732	3300005177	Soil	MRGVLVAAALIFCLMVLIKDGRLLRGVGLTGGCRAVAAPKGEDGNWQACEPGSLQGAPDLTRQGCKSAVFVGKTEYWRCPASIAGGPGS*
Ga0066688_105831502	3300005178	Soil	MRGVLVAAALIFCLMVLIKDGRLLRGVGLTGGCRAVAAPKGEEGNWQACEPGSLQGAPDLTRQGCKSAVFVGKTEYWRC
Ga0070658_111929911	3300005327	Corn Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070683_1010043531	3300005329	Corn Rhizosphere	MRGIFVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070690_1000461521	3300005330	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPA
Ga0070666_101233432	3300005335	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070661_1014349352	3300005344	Corn Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEEGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070692_102129302	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DNRGMRGILVGALLIVALMVAIKDGRVLRATGMTGICRTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070675_1003780581	3300005354	Miscanthus Rhizosphere	VGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070671_1006999531	3300005355	Switchgrass Rhizosphere	IKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070673_1001683862	3300005364	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070659_1001568263	3300005366	Corn Rhizosphere	VALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070703_101690042	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCP
Ga0070701_100088515	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070705_1001257812	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVVLMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070708_1016135741	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVVLMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGK
Ga0070681_116658821	3300005458	Corn Rhizosphere	MRGILVGALLIVVLMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070706_1011412082	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ASNADNRGMRGILVGALLIVVLMVAIKDGCVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070679_1014626851	3300005530	Corn Rhizosphere	RGMRGILVGALLIVVLMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0068853_1004093151	3300005539	Corn Rhizosphere	AIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070672_1000624412	3300005543	Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0070695_1000298903	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRSILVGALLIVVLMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0066700_105254811	3300005559	Soil	PMRGVLVGAVLIFVLMVAVKDGRFLHQAGLTGGCRAVAAPAGQTGHWQACDPGSLQGAPDLTRQGCKSVGLVGKTEYWRCPAPIQGGPGS*
Ga0066699_111327652	3300005561	Soil	MRGVLVAAALIFCLMVLIKDGRLLRGVGLTGGCRAVAAPKGEEGNWQACEPGSLQGAPDLTRQGCKSAVFVGKTEYWRCPASIAGGPGS*
Ga0068855_1006394782	3300005563	Corn Rhizosphere	LMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0066702_103548032	3300005575	Soil	VLVAAALIFLLMVAIRDGRFLRDVGLTGGCRPVAAPRGEEGDWQACEPGKLQGAPDLTRQGCKSVVLVGKTEYWRCPASIEGGPGS*
Ga0068854_1021254081	3300005578	Corn Rhizosphere	ALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0068866_100334971	3300005718	Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAI
Ga0070712_1003855191	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0074055_118627932	3300006573	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGARDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0074056_118247132	3300006574	Soil	MQGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVHVVGETEYWRCPAAIKSSHKPS*
Ga0074053_100137692	3300006575	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLTRQGCKSVQVVGKTEYWRCPAAIKSSHKPT*
Ga0074054_121728951	3300006579	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSH
Ga0074054_121752541	3300006579	Soil	SNADNRGMRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLTRQGCKSVQVVGKTEYWRCPAAIKSSHKPT*
Ga0074049_129376912	3300006580	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCQAVTAPRGEDGSWQACNPGKLEGAPDLTRQGCKSVQLVGKTEYWRCPAAIKSSHKPS*
Ga0074048_100184772	3300006581	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHEPS*
Ga0074057_123293122	3300006605	Soil	MRGILVGALLIVALMVAIKDGRVRRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPA
Ga0074062_129592542	3300006606	Soil	DNRGMRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWHCPAAIKSSHKPS*
Ga0066660_103386752	3300006800	Soil	MRGVLVAAALIFLLMVAIRDGRFLRDVGLTGGCRPVAAPRGEEGDWQACEPGKLQGAPDLTRQGCKSVVLVGKTEYWRCPASIEGGPGS*
Ga0066710_1011058762	3300009012	Grasslands Soil	VLLSAVLIVVLMVLIKDGRFLHQVGMTGGCRAVATPKGQDGAWQACEPGKLQGAPDLSRQGCKSVSFVGKTEYWRCPAAIQGGPGS
Ga0099827_100062305	3300009090	Vadose Zone Soil	MRGVFVGAALIVLLMVAIKDGRFLREVGLTGGCRPVAAPAGQSGAWQACEPGKLQGAPDLTRQGCTSVTFVGKTEYWRCPAAIQGGPGS*
Ga0105247_101765372	3300009101	Switchgrass Rhizosphere	VGALLIVALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0105242_100894464	3300009176	Miscanthus Rhizosphere	ALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0105242_108596812	3300009176	Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKS
Ga0105238_116394272	3300009551	Corn Rhizosphere	MRGILVGALVIVSLMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0105056_10283962	3300009801	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPAGIQGGTG*
Ga0105070_10576792	3300009815	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPDGIQGGTG*
Ga0105072_10364852	3300009818	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFIGKTEYWRCPAGIQGGTG*
Ga0126309_100445112	3300010039	Serpentine Soil	MRGVLLAAALIVLLMIVIKDGRALRQVGLTGGCHAVATPRGDEGTWQVCDPGKLQGTPNLSRQGCKSMKFEGGRQYWRCPAVLGTGPG*
Ga0126309_104128402	3300010039	Serpentine Soil	MRGVLVAAVLVAVLMVMLKDGRLLRQAGLTGGCHAVATPKGEDGDWQACDPGKLQGAPDLSRQSCKSVSFVGKTEYWQCPAGIEGAAGS*
Ga0134125_104156322	3300010371	Terrestrial Soil	MRGILVGALLIVVLMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0134128_105090971	3300010373	Terrestrial Soil	MRGIFVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0134128_107935992	3300010373	Terrestrial Soil	MRGILVGALLIVVLMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSIHKPS*
Ga0134126_122286472	3300010396	Terrestrial Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACEPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPT*
Ga0134122_132136942	3300010400	Terrestrial Soil	NADKEEVRGVLVAAILIVALMVAVKDGRVLRNTGLTGGCHAVATPAGDDGAWHACDRGKLQGAPDLTRQGCKSTKVVGKTEYWRCPAAIESSNQTPSG*
Ga0151489_12367352	3300011106	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTAPRGEDGSWQACDPGKLEGAPDLTRQGCKSVQVVGKTEYWRCPAAIKSSHKPG*
Ga0151490_10883912	3300011107	Soil	MRGILVGALLIVALMVAIKDGRVRRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKP
Ga0137382_104190312	3300012200	Vadose Zone Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPN*
Ga0137374_100279859	3300012204	Vadose Zone Soil	MRGVLVAAALILFLMVAIKDGRLLREAGMTGGCRGVAAPKGQDGDWQACDPGKLQGAPDLARQGCKSVIFVGKTEYWRCPAGIEGAPGA*
Ga0137374_100496462	3300012204	Vadose Zone Soil	MRGVLVAAALILLLMVAVKDGRLLREAGMTGGCRPVAAPKGQDGDWQACDPGKLEGAPDLARQDCKSVIFVGKTEYWRCPAGIEGGPGAGA*
Ga0137372_103419962	3300012350	Vadose Zone Soil	VTLEANAPNADIWGMRGVFFGAALIVVLMVLIKDGRFFREVGMTGGCRAVATPKGQEGAWQACDPGKLQGAPDLSRQGCKSVTFVGRTEYWRCPATIQGGPGS*
Ga0137369_1000505510	3300012355	Vadose Zone Soil	MRGVLVAAALILLLMVAIKDGRLLREAGMTGGCRPVAAPKGQDGDWQACDPGKLEGAPDLARQGCKSVIFVGKTEYWRCPAGIEGGPGAGA*
Ga0137368_105757912	3300012358	Vadose Zone Soil	MRGVLVAAALILLLMVAIKDGRLLREVGMTGGCRAVAAPKGQDGDWQACDAGRLEGAPDLARQGCKSVTFVGKTEYWRCPAGIDGGPAG*
Ga0137375_100893211	3300012360	Vadose Zone Soil	MRGVLVAAALILLLMVAIKDGRLLREAGMTGGCRPVAAPKGQNGDWQACDPGKLEGAPDLARQGCKSVIFVGKTEYWRCPAGIEGGRRVRG
Ga0137373_100054774	3300012532	Vadose Zone Soil	MRGVLVAAALILLLMVAVKDGRLLREAGMTGGCRPVAAPKGQDGDWQACDPGKLEGAPDLARQGCKSVIFVGKTEYWRCPAGIEGGPGAGA*
Ga0164300_100881201	3300012951	Soil	MRGILVSALLIVALMVAIKDGRVLRATGMRGICHTVTTPRGDDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSRKPS*
Ga0164298_100627742	3300012955	Soil	MRGILVGALLIVALMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0164303_100603702	3300012957	Soil	MRGILVGALLIVALMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSRKPS*
Ga0164299_100071742	3300012958	Soil	MRGILVGALLFVVLMVVIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0164301_101547062	3300012960	Soil	MRGILVGALLIVLLMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCTSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0164301_102796572	3300012960	Soil	ASNADNRGMRGSLVGALLIVALMVAIKESRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0164302_106917792	3300012961	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0164308_100468433	3300012985	Soil	MRGILVGALLIVVLMVVIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0157374_100222197	3300013296	Miscanthus Rhizosphere	MRGIFVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0163162_100236561	3300013306	Switchgrass Rhizosphere	VLEANASNADNRGMRGILVGALLIVALMVALKDGRVLRATGMTGICHAVTAPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0163162_104932592	3300013306	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0157376_100776282	3300014969	Miscanthus Rhizosphere	MRGIFVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS*
Ga0163161_108012332	3300017792	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0184610_12449141	3300017997	Groundwater Sediment	MRGVLLAAILIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWQACDPGKLQGAPDLSRQSCKSVSFVGKTEYWRCPAGTQGGTG
Ga0184605_101043411	3300018027	Groundwater Sediment	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0184620_100102822	3300018051	Groundwater Sediment	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0184638_100040711	3300018052	Groundwater Sediment	MRGVLLAAILIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPAGIQGGTG
Ga0184626_100047827	3300018053	Groundwater Sediment	MRGVLLAAILIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPAGTQGGTG
Ga0184619_101552211	3300018061	Groundwater Sediment	ALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0184624_105252912	3300018073	Groundwater Sediment	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0193705_10038151	3300019869	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSS
Ga0193696_10096322	3300020016	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHNPS
Ga0193745_10487862	3300020059	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKP
Ga0224452_10048081	3300022534	Groundwater Sediment	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKS
Ga0222622_100057476	3300022756	Groundwater Sediment	MRGILIGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207653_100854392	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207692_106561272	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICRTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEY
Ga0207684_109528441	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KRGMRGILVGALLIVVLMVAIKDGCVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207707_109598842	3300025912	Corn Rhizosphere	MRGILVGALLIVVLMVAIKDGRVLRSTGMTGICHAVTTPRGEDGSWQACDPGRLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207659_107557412	3300025926	Miscanthus Rhizosphere	FVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207665_100730942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPQGEDGSWQACEPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207711_111855561	3300025941	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHK
Ga0207668_103146282	3300025972	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTPPQGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0207639_103373252	3300026041	Corn Rhizosphere	ASNADNRGMRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0209059_11374922	3300026527	Soil	MRGVLVAAALIFCLMVLIKDGRLLRGVGLTGGCRAVAAPKGEEGNWQACEPGSLQGAPDLTRQGCKSAVFVGKVPRSPPGRNR
Ga0209577_102345832	3300026552	Soil	MRGVLVAAALIFLLMVAIRDGRFLRDVGLTGGCRPVAAPRGEEGDWQACEPGKLQGAPDLTRQGCKSVVLVGKTEYWRCPASIEGGPGS
Ga0208761_10180571	3300026995	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWHCPAAIKSSHKPS
Ga0209879_10273432	3300027056	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPAGIQGGTG
Ga0208525_10264951	3300027288	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWHCPAAIKSSHKPS
Ga0209887_10012643	3300027561	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFIGKTEYWRCPAGIQGGTG
Ga0209811_100047212	3300027821	Surface Soil	MRGILVGALLIVLLMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSRKPS
Ga0209590_100050204	3300027882	Vadose Zone Soil	MRGVFVGAALIVLLMVAIKDGRFLREVGLTGGCRPVAAPAGQSGAWQACEPGKLQGAPDLTRQGCTSVTFVGKTEYWRCPAAIQGGPGS
Ga0209889_10640031	3300027952	Groundwater Sand	MRGVLLAAVLIVALMVAIKDGRLLREAGLTGGCRAVATPKGQDGDWLACDPGKLQGAPDLSRQSCKSVSFLGKTEYWRCPAPIGTETTS
Ga0268264_104499402	3300028381	Switchgrass Rhizosphere	MRGILVGALLIVALMVAIKDGRVLRATGMTGICHTVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRC
Ga0307295_100114053	3300028708	Soil	MRGILIGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSH
Ga0307309_100521231	3300028714	Soil	MRGILIGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0307278_101515461	3300028878	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGVCHAVTAPRGEDGPWQACDPGKLEGAPDLTRQGCKSEQVVGKTEYWRCPAAIKSSHKPS
Ga0307277_104969692	3300028881	Soil	MRGILIGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEDAPDLSRQGCKSVQVVGKTEYWRCPAAIK
Ga0307498_100008232	3300031170	Soil	VRGILVGAVLIVVVMVAIKDGRVLRATGMRGICHAVTAPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGRTEYWRCPAAIQSSHKPT
Ga0307505_100946301	3300031455	Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQLVGKTEYWRCPAAIKSSHKPS
Ga0307468_1002405252	3300031740	Hardwood Forest Soil	MRGILVGALLIVALMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACEPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPT
Ga0307468_1016219012	3300031740	Hardwood Forest Soil	MRGVLVAAFLILALMVAIKDGRFLREVGITGGCRAVAPPSGESGSWLACDPGRLQGAPDLTRQGCKSETHVGRTEYWRCPAGIQGGPGT
Ga0307470_103407702	3300032174	Hardwood Forest Soil	MRGILVGALLIVLLMVAIKDGRVLRSTGMTGVCHAVTTPRGEDGSWQACDPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPS
Ga0307471_1006597402	3300032180	Hardwood Forest Soil	MRGILVGALLIVVLMVAIKDGRVLRATGMRGICHAVTTPRGEDGSWQACEPGKLEGAPDLSRQGCKSVQVVGKTEYWRCPAAIKSSHKPT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066992

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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