Metagenome / Metatranscriptome Family F066988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	58 residues
Representative Sequence	MITSQGYGLIAELIAAALLIAALTGLFVQRSRPWLVGVTMAFVILTVAATVVIASST
Number of Associated Samples	71
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.30 %
% of genes near scaffold ends (potentially truncated)	27.78 %
% of genes from short scaffolds (< 2000 bps)	91.27 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.190 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.397 % of family members)
Environment Ontology (ENVO)	Unclassified (46.032 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.079 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.82% β-sheet: 0.00% Coil/Unstructured: 41.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13531	SBP_bac_11	2.38
PF08734	GYD	2.38
PF01391	Collagen	2.38
PF00982	Glyco_transf_20	2.38
PF00571	CBS	2.38
PF00486	Trans_reg_C	0.79
PF07045	DUF1330	0.79
PF12071	DUF3551	0.79
PF01068	DNA_ligase_A_M	0.79
PF12849	PBP_like_2	0.79
PF10108	DNA_pol_B_exo2	0.79
PF13185	GAF_2	0.79
PF14378	PAP2_3	0.79
PF06568	DUF1127	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	2.38
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	2.38
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.79
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.79
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
All Organisms	root	All Organisms	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
cellular organisms	root	All Organisms → cellular organisms	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.08 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.49 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.94 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.76 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.97 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.59 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Bradyrhizobium sp. 35-63-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	0.79 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.79 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.79 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_103189374	Not Available	614	Open in IMG/M
3300004152\|Ga0062386_101484587	Not Available	565	Open in IMG/M
3300005332\|Ga0066388_100835966	Not Available	1508	Open in IMG/M
3300005332\|Ga0066388_101216578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1289	Open in IMG/M
3300005332\|Ga0066388_102363088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	963	Open in IMG/M
3300005332\|Ga0066388_104319272	Not Available	724	Open in IMG/M
3300005332\|Ga0066388_105521759	Not Available	640	Open in IMG/M
3300005332\|Ga0066388_105928484	Not Available	617	Open in IMG/M
3300005363\|Ga0008090_10072851	Not Available	998	Open in IMG/M
3300005439\|Ga0070711_101234560	Not Available	647	Open in IMG/M
3300005764\|Ga0066903_101010995	Not Available	1521	Open in IMG/M
3300005764\|Ga0066903_101453109	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300005764\|Ga0066903_102704318	Not Available	962	Open in IMG/M
3300005764\|Ga0066903_102885007	Not Available	932	Open in IMG/M
3300005764\|Ga0066903_102935886	Not Available	924	Open in IMG/M
3300005764\|Ga0066903_103048150	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005764\|Ga0066903_103547294	Not Available	841	Open in IMG/M
3300005764\|Ga0066903_103829324	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005764\|Ga0066903_104192283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300005764\|Ga0066903_106211720	Not Available	624	Open in IMG/M
3300005764\|Ga0066903_106750886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300005764\|Ga0066903_107922220	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_108805309	Not Available	512	Open in IMG/M
3300006175\|Ga0070712_100542612	Not Available	979	Open in IMG/M
3300006804\|Ga0079221_10462935	Not Available	809	Open in IMG/M
3300009792\|Ga0126374_11888908	Not Available	502	Open in IMG/M
3300010043\|Ga0126380_12071431	Not Available	523	Open in IMG/M
3300010048\|Ga0126373_10347042	Not Available	1495	Open in IMG/M
3300010048\|Ga0126373_10656909	Not Available	1104	Open in IMG/M
3300010048\|Ga0126373_11325331	Not Available	786	Open in IMG/M
3300010048\|Ga0126373_11357337	Not Available	776	Open in IMG/M
3300010048\|Ga0126373_12331648	Not Available	595	Open in IMG/M
3300010359\|Ga0126376_10516026	Not Available	1110	Open in IMG/M
3300010359\|Ga0126376_11563787	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010360\|Ga0126372_11038109	Not Available	834	Open in IMG/M
3300010361\|Ga0126378_10122023	Not Available	2612	Open in IMG/M
3300010361\|Ga0126378_10658804	Not Available	1160	Open in IMG/M
3300010361\|Ga0126378_12412185	Not Available	601	Open in IMG/M
3300010361\|Ga0126378_13054635	Not Available	533	Open in IMG/M
3300010361\|Ga0126378_13432222	Not Available	503	Open in IMG/M
3300010362\|Ga0126377_10436554	Not Available	1329	Open in IMG/M
3300010366\|Ga0126379_11519487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300010376\|Ga0126381_100604580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	1560	Open in IMG/M
3300010376\|Ga0126381_100721994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300010376\|Ga0126381_100831143	Not Available	1327	Open in IMG/M
3300010376\|Ga0126381_101453747	Not Available	991	Open in IMG/M
3300010376\|Ga0126381_102730645	Not Available	705	Open in IMG/M
3300010376\|Ga0126381_103224744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300012971\|Ga0126369_10012116	All Organisms → cellular organisms → Bacteria	6684	Open in IMG/M
3300012971\|Ga0126369_13064288	Not Available	547	Open in IMG/M
3300016294\|Ga0182041_10402313	Not Available	1165	Open in IMG/M
3300016319\|Ga0182033_11132038	Not Available	700	Open in IMG/M
3300016319\|Ga0182033_11243508	Not Available	668	Open in IMG/M
3300016357\|Ga0182032_10325446	Not Available	1222	Open in IMG/M
3300016387\|Ga0182040_10499958	Not Available	971	Open in IMG/M
3300016387\|Ga0182040_11291496	Not Available	616	Open in IMG/M
3300016404\|Ga0182037_11309129	Not Available	639	Open in IMG/M
3300016422\|Ga0182039_10915901	Not Available	783	Open in IMG/M
3300016445\|Ga0182038_10711942	Not Available	875	Open in IMG/M
3300016445\|Ga0182038_11052624	Not Available	722	Open in IMG/M
3300017822\|Ga0187802_10039141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1711	Open in IMG/M
3300017822\|Ga0187802_10291314	Not Available	635	Open in IMG/M
3300017823\|Ga0187818_10122260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300017924\|Ga0187820_1023819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1557	Open in IMG/M
3300017924\|Ga0187820_1159609	Not Available	684	Open in IMG/M
3300017928\|Ga0187806_1099433	Not Available	928	Open in IMG/M
3300017928\|Ga0187806_1142005	Not Available	788	Open in IMG/M
3300017932\|Ga0187814_10414613	Not Available	525	Open in IMG/M
3300017933\|Ga0187801_10012289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2819	Open in IMG/M
3300017934\|Ga0187803_10273320	Not Available	672	Open in IMG/M
3300017936\|Ga0187821_10496477	Not Available	509	Open in IMG/M
3300017937\|Ga0187809_10049801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1352	Open in IMG/M
3300017975\|Ga0187782_11405156	Not Available	549	Open in IMG/M
3300017993\|Ga0187823_10081389	Not Available	941	Open in IMG/M
3300017993\|Ga0187823_10242436	Not Available	607	Open in IMG/M
3300017994\|Ga0187822_10080469	Not Available	965	Open in IMG/M
3300017999\|Ga0187767_10356362	Not Available	516	Open in IMG/M
3300018006\|Ga0187804_10237055	Not Available	785	Open in IMG/M
3300018007\|Ga0187805_10121951	Not Available	1183	Open in IMG/M
3300020581\|Ga0210399_11421868	Not Available	541	Open in IMG/M
3300021168\|Ga0210406_11199404	Not Available	552	Open in IMG/M
3300021560\|Ga0126371_10031756	Not Available	4949	Open in IMG/M
3300021560\|Ga0126371_10051513	All Organisms → cellular organisms → Bacteria	3940	Open in IMG/M
3300021560\|Ga0126371_10066593	Not Available	3490	Open in IMG/M
3300021560\|Ga0126371_10517303	Not Available	1342	Open in IMG/M
3300021560\|Ga0126371_10709929	Not Available	1153	Open in IMG/M
3300021560\|Ga0126371_11307694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	858	Open in IMG/M
3300021560\|Ga0126371_11937412	Not Available	708	Open in IMG/M
3300022726\|Ga0242654_10373382	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031231\|Ga0170824_128903257	Not Available	726	Open in IMG/M
3300031543\|Ga0318516_10406919	Not Available	784	Open in IMG/M
3300031544\|Ga0318534_10630716	Not Available	608	Open in IMG/M
3300031545\|Ga0318541_10295477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	902	Open in IMG/M
3300031545\|Ga0318541_10721025	Not Available	557	Open in IMG/M
3300031561\|Ga0318528_10365183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	775	Open in IMG/M
3300031572\|Ga0318515_10302447	Not Available	858	Open in IMG/M
3300031572\|Ga0318515_10335219	Not Available	811	Open in IMG/M
3300031573\|Ga0310915_10295262	Not Available	1144	Open in IMG/M
3300031573\|Ga0310915_10647115	Not Available	748	Open in IMG/M
3300031715\|Ga0307476_11433572	Not Available	502	Open in IMG/M
3300031719\|Ga0306917_10710404	Not Available	790	Open in IMG/M
3300031719\|Ga0306917_11220710	Not Available	583	Open in IMG/M
3300031723\|Ga0318493_10022200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2803	Open in IMG/M
3300031744\|Ga0306918_10040527	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300031753\|Ga0307477_10192560	Not Available	1419	Open in IMG/M
3300031754\|Ga0307475_10265130	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300031768\|Ga0318509_10514468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 35-63-5	668	Open in IMG/M
3300031771\|Ga0318546_10150764	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300031792\|Ga0318529_10358571	Not Available	679	Open in IMG/M
3300031890\|Ga0306925_10191876	Not Available	2202	Open in IMG/M
3300031890\|Ga0306925_12122182	Not Available	525	Open in IMG/M
3300031910\|Ga0306923_10881303	Not Available	982	Open in IMG/M
3300031941\|Ga0310912_11233947	Not Available	568	Open in IMG/M
3300031942\|Ga0310916_10497985	Not Available	1038	Open in IMG/M
3300031942\|Ga0310916_11631918	Not Available	523	Open in IMG/M
3300031946\|Ga0310910_10994515	Not Available	656	Open in IMG/M
3300031954\|Ga0306926_10716288	Not Available	1213	Open in IMG/M
3300032001\|Ga0306922_10914865	Not Available	910	Open in IMG/M
3300032001\|Ga0306922_11374693	Not Available	711	Open in IMG/M
3300032059\|Ga0318533_10113105	All Organisms → cellular organisms → Bacteria → Proteobacteria	1891	Open in IMG/M
3300032090\|Ga0318518_10424765	Not Available	681	Open in IMG/M
3300032261\|Ga0306920_100694020	Not Available	1500	Open in IMG/M
3300032261\|Ga0306920_101892000	Not Available	839	Open in IMG/M
3300032261\|Ga0306920_102076501	Not Available	794	Open in IMG/M
3300032892\|Ga0335081_10032502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8380	Open in IMG/M
3300032892\|Ga0335081_10246567	Not Available	2416	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.92%
Aquatic	Environmental → Aquatic	15.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.92%
Freshwater	Environmental → Aquatic → Freshwater	15.08%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.08%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.17%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1031893741	3300004092	Bog Forest Soil	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASSA*
Ga0062386_1014845871	3300004152	Bog Forest Soil	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVA
Ga0066388_1008359662	3300005332	Tropical Forest Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLLGVAMAFAILTVAAIMVIASST*
Ga0066388_1012165781	3300005332	Tropical Forest Soil	MITSQGYGLIAESMAAALLIAALTGLFVQRSKPWLVGLTMAFVILTAAATVVIASST*
Ga0066388_1023630882	3300005332	Tropical Forest Soil	MITSQGYGLIAEFIAAALLIAALTGLFVQRSKPWLVGVTMAFVILAVAATLVIASST*
Ga0066388_1043192721	3300005332	Tropical Forest Soil	MITSHGYGLIAELTAAALLIAALTGLFVQRSKPWMLGVTMAFVILTVAASVVITSSN*
Ga0066388_1055217592	3300005332	Tropical Forest Soil	MITSQGYGLIAELIAATLLIVALTGLFVQRSKPWLVGVMMAFVILTAAATVVIASST*
Ga0066388_1059284841	3300005332	Tropical Forest Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATVVIASPT*
Ga0008090_100728511	3300005363	Tropical Rainforest Soil	MITSHEYGLIAELIAAALVIAALTGLFVQRSKPWMIGVTIPFVILTVAATVVIASST*
Ga0070711_1012345602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVTSQGYGLIAELIATALLIACLTGFFVQRSKPWLVGVTMAFVLLIAATTAVIASST*
Ga0066903_1010109953	3300005764	Tropical Forest Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTMALVILTVAATVVIGSSI*
Ga0066903_1014531091	3300005764	Tropical Forest Soil	MITSHGYGLIAELTAAALLIPALTGLFVQRSKPWLVGVTMALVILIVAATVVMASST*
Ga0066903_1027043183	3300005764	Tropical Forest Soil	MMTLHGYGLIAELTAAALLIVALTGLFVQRSRPWLVGVTMAFVSLTVAATMVIASSI*
Ga0066903_1028850071	3300005764	Tropical Forest Soil	PMITWHGYGLIAELTAATLLIAALTGLFVHRSRPWLIGVTTAFVILTVAATVVMVSPT*
Ga0066903_1029358862	3300005764	Tropical Forest Soil	MMTLHGYGLIAELTAAALLIAALIGLFVQRSRPWLVGVTMAFVILTVAATMVIASSI*
Ga0066903_1030481502	3300005764	Tropical Forest Soil	MLRAMITSQGYGLIAELIAAGLLITALTGLFVQRSKPWLVGVTMAFVILTAAATVVIASST*
Ga0066903_1035472941	3300005764	Tropical Forest Soil	MMTLHGYGLIAELIAAAFLIAALTGLFVQRSRPWLVGVTTAFVILTMAATMVIASST*
Ga0066903_1038293241	3300005764	Tropical Forest Soil	MITFQGYGLIAELIAAALLIAALAGLFVQRSKPWLVGVTMAFVILTAAATVVIASST*
Ga0066903_1041922832	3300005764	Tropical Forest Soil	LSLQNILHLQPNAANESMMTSHGYGLIAELIAAALLIVALTGLFVQRSRLWLVGVTMAFVILAVAVTMVIAS*
Ga0066903_1062117202	3300005764	Tropical Forest Soil	LIKENDDAISVSRYCPNAASAPMITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATVVIASPT*
Ga0066903_1067508861	3300005764	Tropical Forest Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRSKPWLVGVTMAFVILTAAATVVIASST*
Ga0066903_1079222202	3300005764	Tropical Forest Soil	TDRTGPIPRAMITSQGYGLIAESIAAALLIVALTGLLVQRSKPWLVGVTMAFVILTAAATVVIASST*
Ga0066903_1088053091	3300005764	Tropical Forest Soil	MMTSHGYGLIAELIAAALLIAALIGLFVQRSGLWLVGVTMAFVILAVAVTMVIAS*
Ga0070712_1005426121	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IAELIAAALLITALTGLFVQRSKLWLVGVTMAFVILTAAATVVIASST*
Ga0079221_104629352	3300006804	Agricultural Soil	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASST*
Ga0126374_118889081	3300009792	Tropical Forest Soil	MITSQGYGLIAELIAAALLIAALTGWFVQRSKSWLVGVTMAFVILTMAATVVIASST*
Ga0126380_120714311	3300010043	Tropical Forest Soil	MITSQGYGLIAELIAAALLIAALAGLFVQRSKPWLVGVTMAFVILTAAATVVIASST*
Ga0126373_103470423	3300010048	Tropical Forest Soil	MMTLHGYGLIAELTAAALLIVALTGLFVQRSRPWLVGATMAFVILTVAATMVIASSI*
Ga0126373_106569092	3300010048	Tropical Forest Soil	MITSHGYGLIAELIAVALLIAALTGLSVQRSGPWLVGVTIAFVILAVAATMVIASPT*
Ga0126373_113253312	3300010048	Tropical Forest Soil	LSQQNILHLQPNAANESMMTSHGYGLIAELIAAALLIAALIGLFVQRSGLWLVGVTMAFVILAVAVTMVIAS*
Ga0126373_113573372	3300010048	Tropical Forest Soil	MHPMMTSQGYGLIAELIAATLLIAALIGLFVQRSRPWLVGVTVAFVILTMAATMVIASST
Ga0126373_123316481	3300010048	Tropical Forest Soil	MITSQGYGLIAELIAAALLIAALTGLFVHRSKRWLVGVTMAFVILTAAATVVTASST*
Ga0126376_105160261	3300010359	Tropical Forest Soil	LPQQNILAFTQCGDAPMITSQGYGLIAEFIAAALLIAALTGLFVQRSKPWLVGVTMAFVILAVAATLV
Ga0126376_115637871	3300010359	Tropical Forest Soil	MITLQGYGLIAELIAAALLIVALTGLLVQRSKPWLVGVTMAFVILTAAATVVIASSS*
Ga0126372_110381092	3300010360	Tropical Forest Soil	MITSHGYGLIAELTAAALLIPALTGLFVQRSKPWLVGVMMAFVILTAAATVVIASST*
Ga0126378_101220232	3300010361	Tropical Forest Soil	LSQQNILHLQPNAANESMMTSNGYGLIAELIAAALLIAALIGLFVQRSGLWLVGVTMAFVILAVAVTMVIAS*
Ga0126378_106588043	3300010361	Tropical Forest Soil	MMTLHGYGLIAELTAAALLIVALTGLFVQRSRPWLVGVTMAFVILTVAATMVIASSI*
Ga0126378_124121852	3300010361	Tropical Forest Soil	MITSQGYGLIAESIAAALLIVALTGLLVQRSKPWLVGVTMAFVILAVAATLVIASST*
Ga0126378_130546351	3300010361	Tropical Forest Soil	MITSHGYGLIAELTALALLIAALTGLFVQRSKPWLLGVTMAFVILTVAAGVVIASAR
Ga0126378_134322221	3300010361	Tropical Forest Soil	MITFQGYGLIAELIAAALLIASLTGLFVRRSKPWLIGVTMAFVILTAAATVVIA
Ga0126377_104365544	3300010362	Tropical Forest Soil	LPQQNILAFTQCGDAPMITSQGYGLIAEFIAAALLIAALTGLFVQRSKPWLVGVTMAFVILAVAATLVIASST*
Ga0126379_115194872	3300010366	Tropical Forest Soil	MITSHGYGLIAELTAAALLIAALTGLFVQRSKPWMLGVTMAFVILTVAAGVVIASAR*
Ga0126381_1006045802	3300010376	Tropical Forest Soil	MMTSHGYGLIAELIAAALLIAALTGLFVQRSRLWLVGVTMAFVILAVAVTMVIAS*
Ga0126381_1007219941	3300010376	Tropical Forest Soil	SQGYGLIVELIAATLLIVALTGLFVQRSKPWLLGVMMAFVILTAAATVVIASPASCSRC*
Ga0126381_1008311431	3300010376	Tropical Forest Soil	MMTLQGYGLIAELIAAALLIATLTGLFVQRSRPWLVGVTMAFVILTVAATMVIASST*
Ga0126381_1014537471	3300010376	Tropical Forest Soil	MMTLHGYGLIAELIAAVLLIAALTGLFVQRSRPWLVGATMAFVILTVAATMVIASSI*
Ga0126381_1027306451	3300010376	Tropical Forest Soil	MITSHGYGLIAELTAAALLIAALTGLFVQRSKPWLLGVTMAFMILTVAASVVIASST*
Ga0126381_1032247441	3300010376	Tropical Forest Soil	MMTLQGYGLIAELIAAALLIATLTGLFVQRSRPWLVGVTMAFVILTVGATMVIASST*
Ga0126369_100121168	3300012971	Tropical Forest Soil	MITSQGYGLIAELTAPALLIAALTGLFVQRSKPWLLGVAMAFAILTVAAIMVIASST*
Ga0126369_130642881	3300012971	Tropical Forest Soil	MITSQGYGLIAELIAAALMIAALTGLSVHRSKPWLLGVTMAFVILTVAATVVIASSN*
Ga0182041_104023133	3300016294	Soil	VDRAWLQRPHPPNAANAPMITSQGYGLIAELIAAALLIAALTGLLVHRSKPWLVGATMAFVILTVAVTVVIASST
Ga0182033_111320381	3300016319	Soil	MITSQGYGLIAELIATALLITALTGLFVQRSKPWLVGVTMAFVILTVAATVVIASST
Ga0182033_112435082	3300016319	Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRTRPWLVGITMAFVILTVAATVVIASST
Ga0182032_103254462	3300016357	Soil	MITSQGYGLIAELIATASLIAALAGFLIHRSKPWLVGVTMAFMLLIVAATAVIASST
Ga0182040_104999582	3300016387	Soil	MITSQGYGLIAELIATASLIAALAGFLIHRSKPWLVGVTMAFMLLVVAATAVIASST
Ga0182040_112914961	3300016387	Soil	LIAELIAAALLIAALTGLFVQRSRPWLVGVTMAFVILTVAATVVIASST
Ga0182037_113091292	3300016404	Soil	MITSQGYGLIAELIAAALLIAALTGLFVHRSKPWLVGVTLAFVILTVAATVVIASST
Ga0182039_109159011	3300016422	Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRSRPWLVRVTMAFVILTVAATVVIASST
Ga0182038_107119421	3300016445	Soil	RIVSAMITSQGYGLIAELIATASLITALAGFLIHRSKPWLVGVTMAFMLLIVAATAVIASST
Ga0182038_110526243	3300016445	Soil	AMITSQGYGLIAELIAAALLIAALTGLFVQRTRPWLVGITMTFVILTVAATVVIASST
Ga0187802_100391411	3300017822	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASST
Ga0187802_102913141	3300017822	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATAVIASST
Ga0187818_101222603	3300017823	Freshwater Sediment	QGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATAVIASST
Ga0187820_10238193	3300017924	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATAVIASST
Ga0187820_11596092	3300017924	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASST
Ga0187806_10994332	3300017928	Freshwater Sediment	GRDRTRPRCIVGTMITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATAVIASSP
Ga0187806_11420051	3300017928	Freshwater Sediment	MITSQGYGLIAELIATALLIAAPTGFFVQRSKPWLVGVTMAFMILIVAATVVIASST
Ga0187814_104146132	3300017932	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASS
Ga0187801_100122893	3300017933	Freshwater Sediment	MITSQGYGLIAELIATALLIAAPTGFFVQRSKPWLVGVTMAFMILIVAATVVIASSA
Ga0187803_102733201	3300017934	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASSAQGPEFLVQPQKDSA
Ga0187821_104964771	3300017936	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGATMAFTILIVAATVLIASST
Ga0187809_100498011	3300017937	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASSA
Ga0187782_114051561	3300017975	Tropical Peatland	MVRAMMTSQGYGLIAELIATALLITALAGFFVQRSKPWLLGVTMAFAILVAAVSVIIASS
Ga0187823_100813892	3300017993	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASSA
Ga0187823_102424361	3300017993	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGLFVQRSKPWLVGVTMAFMMLIVAATVVIASST
Ga0187822_100804693	3300017994	Freshwater Sediment	MITSQGYGLIAELIATALLIAALTGFFVRRSKSWLVGVTMAFMILIVAATVVIDSST
Ga0187767_103563621	3300017999	Tropical Peatland	LQGYGLIAELIATASLIAALSGLFVQRSKPWLVGVTMAFVILTMAATVVIASST
Ga0187804_102370552	3300018006	Freshwater Sediment	MITSQGYGLIAELIATALLIAAPTGFFVQRSKPWLVGVTMAFMILIVAATVV
Ga0187805_101219512	3300018007	Freshwater Sediment	MITSQGYGVIAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASS
Ga0210399_114218681	3300020581	Soil	LRSESMITSQGFGLIAELIAAALLIAALAGLIVRRSQPWLVSATVALVILIVAVTIIINSST
Ga0210406_111994041	3300021168	Soil	MITSQGYGLIAELIAAALPIVALTGLFVQRSKPWLVGVTMAFVILTVAATVVIASLT
Ga0126371_100317569	3300021560	Tropical Forest Soil	MMTLHGYGLIAELTAAALLIVALTGLFVQRSRPWLVGVTMAFVSLTVAATMVIASSI
Ga0126371_100515135	3300021560	Tropical Forest Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLLGVAMAFAILTVAAIMVIASST
Ga0126371_100665932	3300021560	Tropical Forest Soil	LSQQNILHLQPNAANESMMTSHGYGLIAELIAAALLIAALIGLFVQRSGLWLVGVTMAFVILAVAVTMVIAS
Ga0126371_105173034	3300021560	Tropical Forest Soil	LSLQNILHLQPNAANESMMTSHGYGLIAELIAAALLIVALTGLFVQRSRLWLVGVTMAFVILAVAVTMVIAS
Ga0126371_107099291	3300021560	Tropical Forest Soil	MMTLQRYGLIAELIAAALLIATLTGLFVQRSRPWMVGVTMAFVILTVGATMVIASST
Ga0126371_113076941	3300021560	Tropical Forest Soil	MITSHGYGLIAELTAAALLIAALTGLFVQRSKPWMLGVTMAFVILTVAASVVITSSN
Ga0126371_119374121	3300021560	Tropical Forest Soil	MHPMMTSQGYGLIAELIAATLLIAALIGLFVQRSRPWLVGVTVAFVILTIAATMVIASST
Ga0242654_103733822	3300022726	Soil	LRSESMITSQGFGLIAELIAAALLIAALAGLIVRRSQPWLVSATVALAILIVAV
Ga0170824_1289032573	3300031231	Forest Soil	MVTSQGYGLLAELIATALLIAALTGFFVQRSKPWLVGVTMAFMILIVAATVVIASST
Ga0318516_104069192	3300031543	Soil	MITSQGYGLIAELIAAGLLITALTGLFVQRSKPWLVGVMMAFVILTAAATVVIASST
Ga0318534_106307161	3300031544	Soil	MLRAMITSQGYGLIAELIAAGLLITALTGLFVQRSKPWLVGVMMAFVILTAAATVVIASS
Ga0318541_102954773	3300031545	Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATVVIASPT
Ga0318541_107210252	3300031545	Soil	MITSHGYGLIAELTAAALLIAALTGLFVQRSKPWLVWVTMAFVILTVAASVVIASPI
Ga0318528_103651832	3300031561	Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRSKPWLVGVTMALVILTVAATVVIASPT
Ga0318515_103024472	3300031572	Soil	MITSHGYGLIAELTAAALLIPALTGLFVQRSKPWLVGVTMALVILIVAATVVMASST
Ga0318515_103352191	3300031572	Soil	MITSQGYGLIAELIATALLIAALSGFFVQRSKPWLVGVTMAFMLLIVAATTVIGSST
Ga0310915_102952622	3300031573	Soil	TSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATVVIASPT
Ga0310915_106471151	3300031573	Soil	LIAELIAAALLIAALAGLFVQRSKPWLVGVTMAFVILTAAATVVIASST
Ga0307476_114335721	3300031715	Hardwood Forest Soil	MITSQGYGLIAELIAAALLIVALTGLFVQRSKPWLVGVTMAFVILTVAATVVIASLT
Ga0306917_107104041	3300031719	Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRSKPWLVGVTMAFVLLTAAATLVIASST
Ga0306917_112207101	3300031719	Soil	MITSQGYGLIAELIAAALLLAALTGLFVHRSKSWLVGVTMAFVILTVAATVVIASST
Ga0318493_100222001	3300031723	Soil	LRAVITSQGYGLIAELIAVALLIAALIGLFVQRSKPWLVGVTMAFVILTAAATVVIAAST
Ga0306918_100405278	3300031744	Soil	MITSQGYGLIAELIATALLIAALSGFFVQRSKPWLLGVTMAFMLLIVAATTVIGSST
Ga0307477_101925603	3300031753	Hardwood Forest Soil	IAELIAAALLIVALTGLFVQRSKPWLVGVTMAFVILTVAATVVIASLT
Ga0307475_102651301	3300031754	Hardwood Forest Soil	MITSQGYGLIAELIAAALLIVALTGLFVQRSKPWLVGVTMAFVILTAAATVVIASST
Ga0318509_105144681	3300031768	Soil	PNAASAPMITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATVVIASPT
Ga0318546_101507642	3300031771	Soil	LHSKSHDHIARIGLIAELIATALLIAALSGFFVQRSKPWLVGVTMAFMLLIVAATTVIGSST
Ga0318529_103585711	3300031792	Soil	GYGLIAELIATALLIAALSGFFVQRSKPWLLGVTMAFMLLIVAATTVIGSST
Ga0306925_101918761	3300031890	Soil	MITSQGYGLIAELIATASLITALAGFLIHRSKPWLVGVTMAFMLLIVAATAVIASST
Ga0306925_121221822	3300031890	Soil	MITSQGYGLIAELIAAALLLAALTGLFVHRSKSWLVGVTMAFVILTVAATVVIASPT
Ga0306923_108813031	3300031910	Soil	MITSQGYGLIAELIAAALLIAALTGLFVQRSRPWLVGVTMAFVILTVAATVVIASST
Ga0310912_112339471	3300031941	Soil	NAANAPMITSQGYGLIAELIAAALLIAALTGLFVQRSRPWLVGVTMAFVILTVAATVVIASST
Ga0310916_104979851	3300031942	Soil	MVTSHGYGLIAELTAAALLIAALTGLFVQRSKPWLVWVTMAFVILTVAASVVIASPI
Ga0310916_116319181	3300031942	Soil	ITSQGYGLIAELIATASLITALAGFLIHRSKPWLVGVTMAFMLLIVAATAVIASST
Ga0310910_109945151	3300031946	Soil	IAEFIAAALLIAALTGLFVQRSKPWLVGVTMAFVILAVAATLVIASST
Ga0306926_107162883	3300031954	Soil	ITSQGYGLIAELIAAALLLAALTGLFVHRSKSWLVGVTMAFVILTVAATVVIASPT
Ga0306922_109148653	3300032001	Soil	KSNPCRRIVSAMITSQGYGLIAELIATASLITALAGFLIHRSKPWLVGVTMAFMLLIVAATAVIASST
Ga0306922_113746932	3300032001	Soil	MITSQGYGLIAELIAAALLLAALTGLFVHRSKPWLVGVTMAFVILTVAATVVIASPT
Ga0318533_101131054	3300032059	Soil	MITSQGYGLIAELTAAALLIAALTGLFVQRSKPWLVGVTIAFVILTVAATMVIASPT
Ga0318518_104247651	3300032090	Soil	MSVTGLRNACAPSEKYGLIAELIAVALLIAALIGLFVQRSKPWLVGVTMAFVILTAAATVVIAAST
Ga0306920_1006940203	3300032261	Soil	MITSHGYGLIAELTAAALLIPALTGLFVRRSKPWLVGVTMALVILIVAATVVMASST
Ga0306920_1018920003	3300032261	Soil	MITSQGYGLIAELIAAALLLAALTGLFVHRSKPWLVGVTLAFMILTVAATVVIASPT
Ga0306920_1020765011	3300032261	Soil	MITSQGYGLIAELIAAALLIAALTGLLVHRSKPWLVGATMAFVILTVAVTVVIASST
Ga0335081_100325023	3300032892	Soil	MITSQGYGLIAELIATALLIAALTGFFVRRSKSWLVGVTIAFMILIVAATVLIDSST
Ga0335081_102465673	3300032892	Soil	MITSQGCGLIAELIATALLIAALTGFFVQRSKPWLVGATMAFTILIVAATVLIASST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences