Metagenome / Metatranscriptome Family F066973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	96 residues
Representative Sequence	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIA
Number of Associated Samples	108
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.83 %
% of genes near scaffold ends (potentially truncated)	88.89 %
% of genes from short scaffolds (< 2000 bps)	99.21 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.635 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.476 % of family members)
Environment Ontology (ENVO)	Unclassified (38.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.30% β-sheet: 0.00% Coil/Unstructured: 43.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03928	HbpS-like	3.17
PF01527	HTH_Tnp_1	3.17
PF00248	Aldo_ket_red	0.79
PF02705	K_trans	0.79
PF13533	Biotin_lipoyl_2	0.79
PF13683	rve_3	0.79
PF00909	Ammonium_transp	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.79
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
All Organisms	root	All Organisms	29.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
cellular organisms	root	All Organisms → cellular organisms	29.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	10.32 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.59 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	10.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.59 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.79 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	10.32 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.56 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.59 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	8.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.56 %
Novosphingobium rosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	1.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.59 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.63 %
Novosphingobium sp. PP1Y	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	7.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.56 %
Novosphingobium rosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	1.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.59 %
Novosphingobium sp. AP12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	0.79 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.79 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003368\|JGI26340J50214_10028580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1667	Open in IMG/M
3300005178\|Ga0066688_10363229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	938	Open in IMG/M
3300005180\|Ga0066685_10739529	Not Available	672	Open in IMG/M
3300005363\|Ga0008090_15382172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	665	Open in IMG/M
3300005434\|Ga0070709_10407113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300005435\|Ga0070714_100235366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1688	Open in IMG/M
3300005435\|Ga0070714_101945705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	574	Open in IMG/M
3300005436\|Ga0070713_102439623	Not Available	505	Open in IMG/M
3300005437\|Ga0070710_10310851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300005536\|Ga0070697_100627573	Not Available	946	Open in IMG/M
3300005554\|Ga0066661_10744843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	574	Open in IMG/M
3300005563\|Ga0068855_102387112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	528	Open in IMG/M
3300005602\|Ga0070762_10109805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1607	Open in IMG/M
3300005764\|Ga0066903_105163375	Not Available	691	Open in IMG/M
3300006046\|Ga0066652_101428954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	646	Open in IMG/M
3300006175\|Ga0070712_101293024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	635	Open in IMG/M
3300006175\|Ga0070712_101559844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	577	Open in IMG/M
3300006755\|Ga0079222_12443455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300006804\|Ga0079221_11540810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	535	Open in IMG/M
3300006806\|Ga0079220_11164564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	632	Open in IMG/M
3300006903\|Ga0075426_10882213	Not Available	674	Open in IMG/M
3300006904\|Ga0075424_102705794	Not Available	518	Open in IMG/M
3300006954\|Ga0079219_10344760	Not Available	952	Open in IMG/M
3300009162\|Ga0075423_12223886	Not Available	596	Open in IMG/M
3300010359\|Ga0126376_12731640	Not Available	543	Open in IMG/M
3300010361\|Ga0126378_11081191	Not Available	904	Open in IMG/M
3300010361\|Ga0126378_11278677	Not Available	829	Open in IMG/M
3300010366\|Ga0126379_10260781	Not Available	1714	Open in IMG/M
3300010371\|Ga0134125_11910552	Not Available	645	Open in IMG/M
3300010376\|Ga0126381_101901368	Not Available	858	Open in IMG/M
3300011119\|Ga0105246_11876251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300011269\|Ga0137392_10910717	Not Available	724	Open in IMG/M
3300012198\|Ga0137364_10094268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2096	Open in IMG/M
3300012207\|Ga0137381_11410104	Not Available	589	Open in IMG/M
3300012361\|Ga0137360_10226626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1525	Open in IMG/M
3300012582\|Ga0137358_10595637	Not Available	742	Open in IMG/M
3300012685\|Ga0137397_10754391	Not Available	722	Open in IMG/M
3300012923\|Ga0137359_10879550	Not Available	773	Open in IMG/M
3300012925\|Ga0137419_11813037	Not Available	522	Open in IMG/M
3300012927\|Ga0137416_10933596	Not Available	773	Open in IMG/M
3300012927\|Ga0137416_11190864	Not Available	686	Open in IMG/M
3300012971\|Ga0126369_11534870	Not Available	756	Open in IMG/M
3300016294\|Ga0182041_10828422	Not Available	828	Open in IMG/M
3300016357\|Ga0182032_10541771	Not Available	962	Open in IMG/M
3300016387\|Ga0182040_10606336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	887	Open in IMG/M
3300016404\|Ga0182037_12088314	Not Available	509	Open in IMG/M
3300018468\|Ga0066662_11359464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. PP1Y	732	Open in IMG/M
3300018482\|Ga0066669_10859062	Not Available	808	Open in IMG/M
3300018482\|Ga0066669_11769451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300020579\|Ga0210407_10741589	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300020579\|Ga0210407_11010315	Not Available	634	Open in IMG/M
3300020580\|Ga0210403_10370475	Not Available	1171	Open in IMG/M
3300020583\|Ga0210401_11389258	Not Available	560	Open in IMG/M
3300021170\|Ga0210400_11053821	Not Available	659	Open in IMG/M
3300021178\|Ga0210408_10931027	Not Available	675	Open in IMG/M
3300021178\|Ga0210408_11083535	Not Available	617	Open in IMG/M
3300021403\|Ga0210397_10571723	Not Available	862	Open in IMG/M
3300021406\|Ga0210386_11339372	Not Available	601	Open in IMG/M
3300021407\|Ga0210383_11445947	Not Available	570	Open in IMG/M
3300021432\|Ga0210384_11169142	Not Available	673	Open in IMG/M
3300021476\|Ga0187846_10366664	Not Available	593	Open in IMG/M
3300021478\|Ga0210402_10390535	Not Available	1292	Open in IMG/M
3300021560\|Ga0126371_12303378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	651	Open in IMG/M
3300022720\|Ga0242672_1059567	Not Available	665	Open in IMG/M
3300025898\|Ga0207692_11080602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → Novosphingobium rosa	531	Open in IMG/M
3300025898\|Ga0207692_11198683	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300025906\|Ga0207699_10232086	Not Available	1264	Open in IMG/M
3300025906\|Ga0207699_11366546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300025928\|Ga0207700_10305075	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300025929\|Ga0207664_10256066	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300026360\|Ga0257173_1030620	Not Available	713	Open in IMG/M
3300027297\|Ga0208241_1052181	Not Available	648	Open in IMG/M
3300027729\|Ga0209248_10077600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1008	Open in IMG/M
3300029636\|Ga0222749_10069256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1599	Open in IMG/M
3300031091\|Ga0308201_10226267	Not Available	632	Open in IMG/M
3300031231\|Ga0170824_109011293	Not Available	555	Open in IMG/M
3300031446\|Ga0170820_10482230	Not Available	672	Open in IMG/M
3300031446\|Ga0170820_16515836	Not Available	519	Open in IMG/M
3300031474\|Ga0170818_108206005	Not Available	500	Open in IMG/M
3300031543\|Ga0318516_10416639	Not Available	773	Open in IMG/M
3300031549\|Ga0318571_10263875	Not Available	637	Open in IMG/M
3300031564\|Ga0318573_10176640	Not Available	1127	Open in IMG/M
3300031668\|Ga0318542_10455697	Not Available	663	Open in IMG/M
3300031679\|Ga0318561_10130756	Not Available	1339	Open in IMG/M
3300031681\|Ga0318572_10083426	Not Available	1779	Open in IMG/M
3300031681\|Ga0318572_10417724	Not Available	797	Open in IMG/M
3300031682\|Ga0318560_10502274	Not Available	657	Open in IMG/M
3300031713\|Ga0318496_10826346	Not Available	510	Open in IMG/M
3300031724\|Ga0318500_10197055	Not Available	964	Open in IMG/M
3300031748\|Ga0318492_10783871	Not Available	513	Open in IMG/M
3300031754\|Ga0307475_10739846	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031765\|Ga0318554_10496222	Not Available	691	Open in IMG/M
3300031768\|Ga0318509_10184906	Not Available	1156	Open in IMG/M
3300031770\|Ga0318521_10635300	Not Available	647	Open in IMG/M
3300031771\|Ga0318546_10653887	Not Available	740	Open in IMG/M
3300031771\|Ga0318546_10903134	Not Available	622	Open in IMG/M
3300031779\|Ga0318566_10052822	Not Available	1935	Open in IMG/M
3300031820\|Ga0307473_11171924	Not Available	570	Open in IMG/M
3300031832\|Ga0318499_10288737	Not Available	634	Open in IMG/M
3300031833\|Ga0310917_10191033	Not Available	1366	Open in IMG/M
3300031859\|Ga0318527_10438121	Not Available	557	Open in IMG/M
3300031860\|Ga0318495_10486940	Not Available	539	Open in IMG/M
3300031879\|Ga0306919_11285458	Not Available	554	Open in IMG/M
3300031896\|Ga0318551_10073908	Not Available	1772	Open in IMG/M
3300031897\|Ga0318520_10085032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1747	Open in IMG/M
3300031910\|Ga0306923_10540984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1313	Open in IMG/M
3300031912\|Ga0306921_10955637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	969	Open in IMG/M
3300031912\|Ga0306921_11643310	Not Available	697	Open in IMG/M
3300031941\|Ga0310912_11497217	Not Available	508	Open in IMG/M
3300031947\|Ga0310909_10443673	Not Available	1089	Open in IMG/M
3300032001\|Ga0306922_10476251	Not Available	1332	Open in IMG/M
3300032001\|Ga0306922_11163240	Not Available	787	Open in IMG/M
3300032010\|Ga0318569_10366811	Not Available	671	Open in IMG/M
3300032035\|Ga0310911_10553650	Not Available	667	Open in IMG/M
3300032042\|Ga0318545_10163045	Not Available	794	Open in IMG/M
3300032051\|Ga0318532_10232821	Not Available	654	Open in IMG/M
3300032059\|Ga0318533_10159473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300032059\|Ga0318533_10394387	Not Available	1010	Open in IMG/M
3300032059\|Ga0318533_10937569	Not Available	635	Open in IMG/M
3300032059\|Ga0318533_11433980	Not Available	504	Open in IMG/M
3300032060\|Ga0318505_10488147	Not Available	581	Open in IMG/M
3300032064\|Ga0318510_10127777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	989	Open in IMG/M
3300032076\|Ga0306924_10542833	Not Available	1320	Open in IMG/M
3300032076\|Ga0306924_12613221	Not Available	504	Open in IMG/M
3300032180\|Ga0307471_104102975	Not Available	514	Open in IMG/M
3300033289\|Ga0310914_11769383	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.03%
Host-Associated	Host-Associated	3.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.44%
Plants	Host-Associated → Plants	3.97%
Aquatic	Environmental → Aquatic	1.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.17%
Freshwater	Environmental → Aquatic → Freshwater	1.59%
Cave	Environmental → Terrestrial → Cave	0.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.16%
Loam	Environmental → Terrestrial → Soil → Loam	13.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.59%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.79%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_100285801	3300003368	Bog Forest Soil	MMPRIAIAQIAKMIGRELESDAGPSEEALAVGAILAEAGATTEIVGRLLAEVHRKRPNERMVHAYAFMLEAALGTLRLQASGGDIGADHAIAEVRKR
Ga0066688_103632291	3300005178	Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHAIAAVHKEVADN
Ga0066685_107395292	3300005180	Soil	MIPRTAIPQIAEMIGRELNSGAEPSKEALAAGPILAEAGATPEIVGRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKGRR*
Ga0008090_153821721	3300005363	Tropical Rainforest Soil	MTPRTAITQIAKTIGQELESGAGPSKGALAAGPMLAEAGATTELVGQLLAEARRKRPNNHMIEAYAFMLEAALGTLRVQAN
Ga0070709_104071132	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGTLRLQASGGDVGADNAIAEVPIFA*
Ga0070714_1002353663	3300005435	Agricultural Soil	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGMLRLQASGGDVGADNAIAEVPIFA*
Ga0070714_1019457051	3300005435	Agricultural Soil	MPGTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYGFILEGALETLRLHANGGDVSAEHEIAEIHNRVDHAL
Ga0070713_1024396232	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHEIGEVHN
Ga0070710_103108513	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MMPPIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGTLRLQASGGDVGADNAIAEVPIFA*
Ga0070697_1006275731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIPRTAIAQIAKEIGRELNSGAQPSEEALAIGPILAEAGATPEIVGRLFAEAQRNRRSDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKEVADNLRKSSIAPD
Ga0066661_107448431	3300005554	Soil	MMPRIAITQIARMIGRELESDAGPSEEALAAGAILAEAGATTEIVGRLLAEAHRKRPNESMIAAYAFMLEAALGTLRLQASGG
Ga0068855_1023871121	3300005563	Corn Rhizosphere	MSRTAIAQIAKLIGRDLESGTGPSEEALATGPILAEAGATTEIVDRLFAEARRKRPNDRMIQAYAFIIEGALETLRLHANGGDATAEHEIAEIHNRVDHALGQGDFAPEMLM
Ga0070762_101098052	3300005602	Soil	MPRTAIAQIAKLIGQELESGAEPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHN*
Ga0066903_1051633751	3300005764	Tropical Forest Soil	MKPRTTIAQIAKMIGRELDSGVRLSEEALAAGPILAEGGATAEIVGSLLAEAHRTHPQDRMIAAYAFLLEGALETLRLQASGGDVGAEHAIAEVRDRLGNALRKGGVTPEV
Ga0066652_1014289541	3300006046	Soil	MPLTAIAQIAKLIGQELESGAGPSEQALATGPKLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAE
Ga0070712_1012930241	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKLIGRELESDAGPSEEALAAGAILAEAGATAEIVGWLVAEAHRKGPNELMVQAYAFMLDAALGTLRLQASGGDVGADNAIAEVPIFA*
Ga0070712_1015598441	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MMPPIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGMLRLQASGGDV
Ga0079222_124434551	3300006755	Agricultural Soil	MPGTTIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQHKRPNDRMIQAYAFIIEGALETLRLHANGGDATAEHEIAEIHNRVDHALGQGDSAPEM
Ga0079221_115408101	3300006804	Agricultural Soil	MPGTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIIERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGD
Ga0079220_111645641	3300006806	Agricultural Soil	MMPRTAIAEIAKLIGRELESGAAPSEGALATGPMLAEAGATNEVAERLFAEAHRKRPNYRMIEAYAFMLEGALGTLRLQANG
Ga0075426_108822131	3300006903	Populus Rhizosphere	MIPRTAITQIAKEIGRELNSGAQPSEEALAIGPILAEAGATPEIVGRLFAEAQRNRRSDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKEVADNLRKS
Ga0075424_1027057941	3300006904	Populus Rhizosphere	MMPRTIAQIAKIIGRELESGVGPSEEAVAAGPLLAEAGATTQIVGSLLAEANRKRPDDRLIAAYAFILEGALGTLRLQASGGD
Ga0079219_103447601	3300006954	Agricultural Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKHPNDLMMHAYAFLLEGALETLRLHANGGDVSAEHEIGKV
Ga0075423_122238862	3300009162	Populus Rhizosphere	MMPRTAIAQIAKMIGRDLDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKPPNDRMIAGYTFILEGALGTLRLQASGGDIDADRAIAEVRHRLDDAVQKGDIA
Ga0126376_127316401	3300010359	Tropical Forest Soil	MKPRTTIAQIAKMIGRELDSGVRLSEEALAAGPILAEGGATAEIVGCLLAEAHRTHPQDRMIAAYAFLLEGALETLRLQASGGDVGAEH
Ga0126378_110811912	3300010361	Tropical Forest Soil	MKPRTTIAQIAKMIGRELDSGVRLSAEALAAGPILAEGGATAEIVGCLLAEAHRTHPQDRMIAAYAFLLEGALETLRLQASGGDVGAEHAIAEVRDRLGNALRKG
Ga0126378_112786771	3300010361	Tropical Forest Soil	MTPRTAITQIAKMIGQELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLEAALGTLRVQANGGNVEADHAIAEVRRGLDYTLA
Ga0126379_102607813	3300010366	Tropical Forest Soil	MAQIAKVIGQELNDSVGPSEEALAAGPILADAGATTEIIASLLAEARRKRPDDRLIAGYTFILESALGTLRLQS
Ga0134125_119105521	3300010371	Terrestrial Soil	MAGSEQPKTMSRTAIAQIAKLIGRDLESGTGPSEEALATVPILAEAGATTEILDRLFAEGRRKSPHNRMIQAYAFMLEGALGELRLQANGGDVSAMHE
Ga0126381_1019013681	3300010376	Tropical Forest Soil	MTPRTAITQIAKTIGQELESGAGPSKEALAAGPMLAEAGATTELVGQLLAEARRKRPNNHMIEAYAFMLEAALGTLRVQANGGN
Ga0105246_118762511	3300011119	Miscanthus Rhizosphere	MPGTTIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQHKRPNDRMIQAYAFIIEGALETLRLHANGGDAT
Ga0137392_109107172	3300011269	Vadose Zone Soil	MMPRIAITQIAKMIGRELESDAGPSEGALAAGAMLAEAGAPTEIVGRLLAEAHRKRPNERMVHAYAFMLEAALGTLRLQASGGDIGADRAIAEVREGLD
Ga0137364_100942682	3300012198	Vadose Zone Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPILADAGATTEIVARLLAEVHRKRPNDRMIAGYTFILEGALGTLRLQASGGDIGADRAIAEVRQQAR*
Ga0137381_114101041	3300012207	Vadose Zone Soil	MIPQTAIVQIAKRIGRELNSGAEPSEDALAAGPILAQAGATPEIVGRLLAEAQRNRPSDRMIHAYAFMLEGALGTLRVQASGGDVAADHAIAEVHKEVADNLQKGCIAA
Ga0137360_102266261	3300012361	Vadose Zone Soil	MMPRIAITQIARMIGRELESDAGPSGEALAAGAILAEAGATTEIVGRLLAEAHRKRPNGRMVHAYAFMLEAALGTLRLQASGGDIGADHAIAEVRKR
Ga0137358_105956371	3300012582	Vadose Zone Soil	MPRTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLLAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVDHALGQGDF
Ga0137397_107543911	3300012685	Vadose Zone Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPSDRMIQAYAFILEGALETLRLQANGGDVSAEHEIGEVHNR
Ga0137359_108795501	3300012923	Vadose Zone Soil	MIPRTAIVQIAKKIGRELNSGAEPSEEALAAGPIWAEAGATPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHAIAAVHKEVADNLR
Ga0137419_118130371	3300012925	Vadose Zone Soil	MIPRTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHAIAAVHK
Ga0137416_109335962	3300012927	Vadose Zone Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLLAEAQRKRPNDRMIQAYAFILEGALETLRLHANGGDVSAEHEIGEVHNRVKHALGQGDFA
Ga0137416_111908641	3300012927	Vadose Zone Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALATGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLEGALGTLRVQASGGDVGAD
Ga0126369_115348701	3300012971	Tropical Forest Soil	MAQIAKVIGQELNDGVGPSEEALTAGPILADAGATTEIIASLLAEARCKRPDDRMIAGYTFILESALGTLRLQSSGGDIGADRAIAEVRQ
Ga0182041_108284222	3300016294	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVRRLLTEARRKRPSDRMIDAYAFMLEAALGTLRVQANGGNVGADHAIAEVRRVLDYALAKDGIAP
Ga0182032_105417711	3300016357	Soil	MTPRTAITQIAKMIGQELESAAGPSEGALAAGPMLAEAGATTELVCQLLAEARRKRPNHRMIDAYAFMLEAALGTLRVQANGGNV
Ga0182040_106063361	3300016387	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAGYTFMLEGALGTLRLQSSG
Ga0182037_120883141	3300016404	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGAMLAEAGATTELVGRLLAEATRKRPNNRIIDAYAFMLEAALGTLRVQANGGNVEADHAIAEVRRGLDYTLAKDRIA
Ga0066662_113594641	3300018468	Grasslands Soil	MMPRTPIAEIAKLIGRELESGAAPSEGALATGPMLAEAGATDEIAERLFAEARRKRPNYSMIEAYAFMLEGALGTLRLQANGGDV
Ga0066669_108590621	3300018482	Grasslands Soil	MIPRTPIAEIAKLIGRELESGAAPSEGALATGPMLAEAGATKEIAERLFAEAHRKRPNYRMIEAYAFMLEGALGTLRLQANGGDVDAEH
Ga0066669_117694511	3300018482	Grasslands Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGVTTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANRGDVSAEHEIAEVH
Ga0210407_107415891	3300020579	Soil	MPRTAIAQIAKMIGRELQSGAGPSEEVLVVGPMLAEAGATKEIVGSLLAEAHRKRPDDRMIEAYAFMLESALGTLRLQASGGDVGAGHAIT
Ga0210407_110103151	3300020579	Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGATPEIVGRLLAEAHRKRPNDRMIHAYAFMLEGALGTLRVQSSDGDVDGRPCDRGGAQGGR
Ga0210403_103704752	3300020580	Soil	MIPRTAIVQIAKKIGRELNSGAEASEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHAIAAVHKEVADNLRESSIAPDVL
Ga0210401_113892581	3300020583	Soil	MIPQTAIVQIAKRIGRELNSGTEPSEDALAAGPILAEAGATPEIVGRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRVQASGEDVGADHTIAAVHKEV
Ga0210400_110538211	3300021170	Soil	MIPRTAIAQIAKEIGRELNSGAQPSEEALAIGPILAEAGATPEIVGRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKEVADNL
Ga0210408_109310272	3300021178	Soil	MIPRTAIAQIAKKIGRELDFGAEPSEEALAAGPILAEAGATPEIVGRLLAEAHRKRPNDRMIHAYAFMLEGALGTLRVQSSGGDVDADHAIAAVHKGSLITSGRAASHLTCSCWWHVLLR
Ga0210408_110835351	3300021178	Soil	MIPRTAIVQIAKKIGRELNSGAEASEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGA
Ga0210397_105717231	3300021403	Soil	MIPRTAIVQIAKKASEDALAAGPILAEAGVTPEIVGQLLVEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHADNLRKSSIVIGNVLRAQRGRQRGRLRFHRAH
Ga0210386_113393721	3300021406	Soil	MMPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHE
Ga0210383_114459471	3300021407	Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHEIGEVHNRVDHALGQGDFAPEVLM
Ga0210384_111691421	3300021432	Soil	MPRTAITQLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLLAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVDHA
Ga0187846_103666641	3300021476	Biofilm	MKPRITIAQIAKMIGRELDSGVRLSEEALAAGPILAEGGATAEIVGCLLAEAHRTHPQDRMIAAYAFLLEGALATLRLQAS
Ga0210402_103905353	3300021478	Soil	MMPRTAIAQIAKMIGRELQSGVGPSEEALGVGPILAEAGVAKEIVGSLLAEAHRKRPDDRMIEAYAFMLESALGTLRLQANGGDVGADHAIAA
Ga0126371_123033781	3300021560	Tropical Forest Soil	MTPRTAITQIAKMIGQELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDHMIDAYAFMLEAALGTLRVQANGGNVGADHTI
Ga0242672_10595672	3300022720	Soil	MPRTAIAQIAKLIGQELESGAEPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHEIGEVHNRVDHALGQGDFAPEVLMLL
Ga0207692_110806021	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGG
Ga0207692_111986832	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGTLRLQASGGDVGADNA
Ga0207699_102320863	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKLIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGTLRLQASGGDVGADNAIAEVPIFA
Ga0207699_113665461	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPGTAIAQLAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYGFILEGALETLRLHANGGDVSAEHEIAEIHNRVDH
Ga0207700_103050752	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRIAITQIAKLIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGMLRLQASGGDVGADNAIAEVPIFA
Ga0207664_102560662	3300025929	Agricultural Soil	MMPRIAITQIAKMIGRELESDAGPSEEALAAGAILAEAGATAEIVGRLLAEAHRKGPNELMVQAYAFMLDAALGMLRLQA
Ga0257173_10306201	3300026360	Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALATGPILAEAGATPEIVGQLLAEAQRNRPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKEVADNLRKSSI
Ga0208241_10521811	3300027297	Forest Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHEIGEVHNRVDHALGQGDF
Ga0209248_100776002	3300027729	Bog Forest Soil	MMPRTAIAQIAKMIGQELKSGARPSEGALAAGPILAEAGATTELVERLFAEARRKRPNNRMIDAYAFMLEVALGTLRVQANGGDVGADHAIAEVRKGLD
Ga0222749_100692561	3300029636	Soil	MIPRTAIAQIAKEIGRELNSGAQPSEEALAIGPILAEAGATPEIVGRLFAEAQRNRRNDRMIHAYAFMLEGALGTLRVQASGGDVGADHTIAAVHKEVADNLRKSSIAPD
Ga0308201_102262671	3300031091	Soil	MPRTAITLLAKLIGQELESRVGPSEQALATGPMLAEAGATTEIVERLFAEAQRNRPNDRMIQAYAFILEGALETLRLQANGGDVSAEQEIAEVHNRVDHALGQGDFAP
Ga0170824_1090112931	3300031231	Forest Soil	MMPRTAIAQIAKMIGRELDTGVGPSEEALAAGPILAEAGATTEIVGGLLAEAHRKHPDDRVIAGYTFILEGALGTLRLQSS
Ga0170820_104822302	3300031446	Forest Soil	MIPQTAIVQIAKKIGRELNSGAEPSEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHADRGGAQGGR
Ga0170820_165158361	3300031446	Forest Soil	MMPRTAIAQIAKMIGRELDTGVGPSEEALAAGPILAEAGATTEIVGGLLAEAHRKHPDDRVIAGYTFILEGALGTLRLQSSGRRH
Ga0170818_1082060051	3300031474	Forest Soil	MIPRTAIVQIAKKASEDALAAGPILAEAGVTPEIVGQLLAEAQRNHPNDRMIHAYAFMLEGALGTLRVQASGGDVGADHADRGGAQGGR
Ga0318516_104166391	3300031543	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHN
Ga0318571_102638751	3300031549	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGAMLAEAGATTELVGRLLAEARRKRPNNRIIDAYAFMLEAALGTLRVEANGGNVGAEQAIA
Ga0318573_101766401	3300031564	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAGYTFMLEGALGTLRLQSSGGDIGADRAIAEVRHRLDDALQK
Ga0318542_104556971	3300031668	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVS
Ga0318561_101307562	3300031679	Soil	MPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIA
Ga0318572_100834264	3300031681	Soil	MMPRTTIAKIAKMIDRELDSGVELSEEALAAGPILAEGGATAEIVRRLLAEGHRSHPDDGMIAAYAFLLEGALATLRLQ
Ga0318572_104177241	3300031681	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLEAALETLRVQANGGNVGAGHAIAEVRRGLDYALVKDGIAPEV
Ga0318560_105022742	3300031682	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVH
Ga0318496_108263461	3300031713	Soil	MMPRTTIAKIAKMIDRELDSGVELSEEALAAGPILAEGGATAEIVRRLLAEGHRSHPDDGMIAAYAFLLEGALATLRLQASGGDVG
Ga0318500_101970551	3300031724	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAETGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVDHALGQGDFAPEM
Ga0318492_107838711	3300031748	Soil	MMPRTTIAKIAKMIDRELDSGVELSEEALAAGPILAEGGATAEIVRRLLAEGHRSHPDDGMIAAYAFLLEGALATLRLQASGGDVGAEHEIADVRNRLGD
Ga0307475_107398461	3300031754	Hardwood Forest Soil	MMPRTAIAQIAKMICRELDSGVGPSEEALTAGPLLAEAGATPEIVESALAEAHRKRPDDRMIDAYTFILEGALTTLRLRANGGDLGAGHANCRGAQQAR
Ga0318554_104962221	3300031765	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVD
Ga0318509_101849062	3300031768	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYIFLLEGALGTLRLQSSGGDIGADRAIVEVRHRLDDALK
Ga0318521_106353001	3300031770	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTVLVGRLLAEARRKRPNDRMIDAYAFMLEAALGTLRVQANGGNVGAGHAIAEVRRGLDYTLAKGGIAPEV
Ga0318546_106538871	3300031771	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFMLEAALGTLRVQANGGNVEADQAIAEVRRGLDYTLAKDGIALE
Ga0318546_109031341	3300031771	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIEAYAFMLEAALETLRVQANGGNVGAGHAIAEVRRGLDYTLAKDGIAPEVLM
Ga0318566_100528221	3300031779	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFMLEAALGTLRVQANGGNVEADQAIAEVRRGLDYTLAKDGIALEVLML
Ga0307473_111719241	3300031820	Hardwood Forest Soil	MPRTAIAQIAKLIGQELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIA
Ga0318499_102887371	3300031832	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTVLVGRLLAEARRKRPNDRMIDAYAFMLEAALGTLRVQANGGNVGAGHAIAEVRRGL
Ga0310917_101910332	3300031833	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIAEVRHRLDDALNKG
Ga0318527_104381211	3300031859	Soil	MMPRTAITHIAESIGRELDTGVGPSEEALAAGPILAKAGATSEIVGSLLAEAHRKRPDDRMLSGYTFILEGALGTLRLQSSGGDIE
Ga0318495_104869402	3300031860	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVDHALGQGDFA
Ga0306919_112854581	3300031879	Soil	MPRTAIAQIAKLIGRELESGVGPSEGALATGPALAEAGATNEIAERLFAEAHRKRPNNRMIEAYAFMLEGALGTLRLLANGGDVGAGHTIDEVRNKVDQALGRADVAPEV
Ga0318551_100739081	3300031896	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFMLEAALGTLRVQANGGNVEADQAIAEVRRGLDYTLAKDGIALEV
Ga0318520_100850321	3300031897	Soil	MMPRTAIAQIAKIIGRELDTSAGPSAEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADPAIGPDI
Ga0306923_105409843	3300031910	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGD
Ga0306921_109556371	3300031912	Soil	MTPRTAIAQIAKMIGRELDTGAGPSEEALAAGSILADAGATTEIIASLLAEARRKRPEDRMIAGYTFILEGALGALRLQASGGDV
Ga0306921_116433101	3300031912	Soil	MMPRTAIAQIAKLIGRELESGVGPSEGALATGPALAEAGATNEIAERLFAEAHRKRPNNRMIEAYAFMLEGALGTLRLLANGGDVG
Ga0310912_114972171	3300031941	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATKEIIGGLLAEVHRKRPNGRMIAGYMFMLEGALGTLRLQSSGGDIEADRAI
Ga0310909_104436731	3300031947	Soil	MPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIAE
Ga0306922_104762511	3300032001	Soil	MTPRTAITQIAKMIGRELEAGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLEAALETLRVQANGGNVGAGHAIAEVRRGLDYALVK
Ga0306922_111632402	3300032001	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMVEAYAFMLEAALETLRVQANG
Ga0318569_103668111	3300032010	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFMLEAALGTLRVQANGGNVEADQAIAEVRR
Ga0310911_105536501	3300032035	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGD
Ga0318545_101630451	3300032042	Soil	MMPRTAIAELAKMIGRELDTGAGPSEEALAAGPMLAEAGATTEIIGSLLAEVHRKRPNDRIIAGYTFMLEGALGTLRLQSSGG
Ga0318532_102328212	3300032051	Soil	MMPRTAITHIAKSIGRELDTGVGPSEEALAAGPILAEAGATTEIVGSLLAEAHRKRPDDRMISGYTFILEGALGTLRLQSSGGDIEADRAIAEVRHSLD
Ga0318533_101594731	3300032059	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIAEVRHRLDNALN
Ga0318533_103943872	3300032059	Soil	MPRTAITQLAKLIGQELESRIGPSEQALATGPLLAEAGATTEIVERLFAEAQRKRPNDRMIQAYAFILEGALETLRLQANGGDVSAEHEIAEVHNRVDHALGQGDFAPEMLM
Ga0318533_109375692	3300032059	Soil	MTPRTAITQIAKMIGRELESGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLEAALETLRVQANGGNVGAGHAIAEV
Ga0318533_114339801	3300032059	Soil	MTPRTAITQIAKMIGQELESAAGPSEGALAAGPMLAEAGATTELVCQLLAEARRKRPNHRMIDAYAFMLEAALGTLRVQANGGNVGADHAIEEVRRVLD
Ga0318505_104881471	3300032060	Soil	MTPRTAITQIAKMIGQELEAGAGPSEGALAAGPMLAEAGATTELVDRLLAEARRKRPNNRMIEAYAFMLEAALGTLRVQANGGN
Ga0318510_101277771	3300032064	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIAELRHLLD
Ga0306924_105428333	3300032076	Soil	MTPRTAITQIAKMIGRELEAGAGPSEGALAAGPMLAEAGATTELVGRLLAEARRKRPNDRMIDAYAFMLEAALETLRVQANGGNVGAGHAIAEV
Ga0306924_126132211	3300032076	Soil	MMPRTAIAQIAKMIGRELDTGAGPSEEALAAGPTLAEAGAATEIVGSLLAEAHRKRPDDRMVAGYSFLLEGALGTLRLQSSGGDIGADRAIAEVRHRLDNALNK
Ga0307471_1041029751	3300032180	Hardwood Forest Soil	MPRTAIAQIAKLIGRELESGAGPSEQALATGPMLAEAGATTEIVERLFAEAQRKRPNDLMMQAYAFILEGALETLRLHANGGDVSAEHEIGEVHNRVDHAL
Ga0310914_117693832	3300033289	Soil	MTPRTAITQIAKMIGQELESGAGPSEGALAAGPMLAEAGATTELVRRLLTEARRKRPSDRMIDAYAFMLEAALGTLRVQANGGNVGADHAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences