Metagenome / Metatranscriptome Family F066965

Basic Information
Family ID	F066965
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	47 residues
Representative Sequence	GQSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN
Number of Associated Samples	121
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (97.619 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (13.492 % of family members)
Environment Ontology (ENVO)	Unclassified (37.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.825 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 0.00% Coil/Unstructured: 77.63%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00486	Trans_reg_C	2.38
PF02518	HATPase_c	1.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.62 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.62 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.62 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.68 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.89 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.68 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	39.68 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	37.30 %
Unclassified	root	N/A	2.38 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7.14 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	6.35 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.56 %
Unclassified	root	N/A	2.38 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.79 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	7.14 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	6.35 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	4.76 %
Unclassified	root	N/A	2.38 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.79 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig69624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300001213\|JGIcombinedJ13530_100104491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	1032	Open in IMG/M
3300001417\|JGI20196J14858_1007706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	917	Open in IMG/M
3300001593\|JGI12635J15846_10744436	Not Available	563	Open in IMG/M
3300001661\|JGI12053J15887_10524330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300002245\|JGIcombinedJ26739_100143098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2259	Open in IMG/M
3300002245\|JGIcombinedJ26739_100333565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1398	Open in IMG/M
3300002245\|JGIcombinedJ26739_101507860	Not Available	568	Open in IMG/M
3300004082\|Ga0062384_100565944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	764	Open in IMG/M
3300004092\|Ga0062389_104848469	Not Available	507	Open in IMG/M
3300004154\|Ga0066603_10242199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300005338\|Ga0068868_100491366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300005347\|Ga0070668_101523021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300005356\|Ga0070674_101141616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300005366\|Ga0070659_101879313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300005437\|Ga0070710_10250733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1138	Open in IMG/M
3300005455\|Ga0070663_100066474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2612	Open in IMG/M
3300005511\|Ga0077121_10619188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300005553\|Ga0066695_10187343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1296	Open in IMG/M
3300005578\|Ga0068854_101230639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300005614\|Ga0068856_101699722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	643	Open in IMG/M
3300005615\|Ga0070702_101707217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300005618\|Ga0068864_101086328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	796	Open in IMG/M
3300005655\|Ga0073905_10439110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300005842\|Ga0068858_101802994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300005844\|Ga0068862_102074345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300006028\|Ga0070717_12159830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300006042\|Ga0075368_10502046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300006047\|Ga0075024_100305118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300006175\|Ga0070712_101938302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300006177\|Ga0075362_10445103	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006178\|Ga0075367_11086275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300006573\|Ga0074055_11762781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300006847\|Ga0075431_100815398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300006864\|Ga0066797_1166797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300007076\|Ga0075435_100032607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4115	Open in IMG/M
3300009089\|Ga0099828_10864441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	809	Open in IMG/M
3300009098\|Ga0105245_11470172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300009137\|Ga0066709_100355980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2013	Open in IMG/M
3300009147\|Ga0114129_13033526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300009148\|Ga0105243_12923813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300010336\|Ga0134071_10380081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	717	Open in IMG/M
3300010999\|Ga0138505_100057219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300012205\|Ga0137362_10993898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	715	Open in IMG/M
3300012206\|Ga0137380_10396367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1226	Open in IMG/M
3300012349\|Ga0137387_10567022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
3300012356\|Ga0137371_10355836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300012357\|Ga0137384_11166202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012362\|Ga0137361_11651024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300012363\|Ga0137390_11262999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	685	Open in IMG/M
3300012683\|Ga0137398_10811115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	654	Open in IMG/M
3300012891\|Ga0157305_10247763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300012914\|Ga0157297_10024217	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300012918\|Ga0137396_11079541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300012923\|Ga0137359_11249472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300012927\|Ga0137416_10353807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1232	Open in IMG/M
3300012938\|Ga0162651_100042693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300012957\|Ga0164303_10844753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300012985\|Ga0164308_11293181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	662	Open in IMG/M
3300012987\|Ga0164307_10646382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	821	Open in IMG/M
3300013308\|Ga0157375_10345148	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300015242\|Ga0137412_10040297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3813	Open in IMG/M
3300015242\|Ga0137412_10334072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1182	Open in IMG/M
3300015245\|Ga0137409_10805337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	774	Open in IMG/M
3300015371\|Ga0132258_11148439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1963	Open in IMG/M
3300018028\|Ga0184608_10472407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300018061\|Ga0184619_10328039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300018429\|Ga0190272_10470005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1056	Open in IMG/M
3300018429\|Ga0190272_11178009	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300018476\|Ga0190274_11772495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	712	Open in IMG/M
3300019886\|Ga0193727_1160708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300021403\|Ga0210397_10126216	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300021404\|Ga0210389_10565066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	894	Open in IMG/M
3300021559\|Ga0210409_10624234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300023267\|Ga0247771_1105608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300023268\|Ga0247765_1015970	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300025464\|Ga0208076_1066920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	622	Open in IMG/M
3300025915\|Ga0207693_11436415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300025917\|Ga0207660_11094182	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300025919\|Ga0207657_10212050	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300025924\|Ga0207694_10538812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M
3300025937\|Ga0207669_11316055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300025945\|Ga0207679_10941766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300025986\|Ga0207658_10976589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300026041\|Ga0207639_10565413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300026067\|Ga0207678_10329990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1313	Open in IMG/M
3300026088\|Ga0207641_11305765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300026116\|Ga0207674_10072648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3455	Open in IMG/M
3300026121\|Ga0207683_10150019	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300026326\|Ga0209801_1351263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300026332\|Ga0209803_1101592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300026999\|Ga0207949_1020379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	608	Open in IMG/M
3300027388\|Ga0208995_1033167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	906	Open in IMG/M
3300027535\|Ga0209734_1050304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	787	Open in IMG/M
3300027537\|Ga0209419_1092621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	600	Open in IMG/M
3300027603\|Ga0209331_1039460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1205	Open in IMG/M
3300027651\|Ga0209217_1132122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	699	Open in IMG/M
3300027681\|Ga0208991_1133440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	737	Open in IMG/M
3300027684\|Ga0209626_1071080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	884	Open in IMG/M
3300027866\|Ga0209813_10413855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300027875\|Ga0209283_10247828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1181	Open in IMG/M
3300027895\|Ga0209624_10122829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	1706	Open in IMG/M
3300027895\|Ga0209624_10194271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	1347	Open in IMG/M
3300027898\|Ga0209067_10254739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	955	Open in IMG/M
3300027908\|Ga0209006_10936216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	693	Open in IMG/M
3300028047\|Ga0209526_10378808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	943	Open in IMG/M
3300028381\|Ga0268264_11860880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300028536\|Ga0137415_10594383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	917	Open in IMG/M
3300028713\|Ga0307303_10095778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300028778\|Ga0307288_10185457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300028791\|Ga0307290_10120364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300028796\|Ga0307287_10117816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300028811\|Ga0307292_10462696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300029990\|Ga0311336_11200640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300029999\|Ga0311339_11714076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300030019\|Ga0311348_11379621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300030053\|Ga0302177_10092579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	1759	Open in IMG/M
3300030520\|Ga0311372_12068425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	663	Open in IMG/M
3300031708\|Ga0310686_101483133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	744	Open in IMG/M
3300031823\|Ga0307478_10822478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	778	Open in IMG/M
3300031852\|Ga0307410_12055969	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032002\|Ga0307416_100212340	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300032126\|Ga0307415_102158448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300032205\|Ga0307472_102008075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300033475\|Ga0310811_10572564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1148	Open in IMG/M
3300034126\|Ga0370486_151847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.84%
Host-Associated	Host-Associated	28.57%
Engineered	Engineered	1.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.49%
Plants	Host-Associated → Plants	28.57%
Aquatic	Environmental → Aquatic	6.35%
Wastewater	Engineered → Wastewater	0.79%
Modeled	Engineered → Modeled	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.32%
Peat	Environmental → Terrestrial → Peat	3.97%
Sediment	Environmental → Aquatic → Sediment	3.17%
Roots	Host-Associated → Plants → Roots	3.17%
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.59%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.59%
Marine	Environmental → Aquatic → Marine	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.79%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.51%
Loam	Environmental → Terrestrial → Soil → Loam	18.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.59%
Pond	Environmental → Aquatic → Freshwater → Pond	0.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.17%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.59%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.59%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.17%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.59%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.59%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005655	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_supernatant	Engineered	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023267	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L197-509C-6	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066965

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0624.00004400	2166559005	Simulated	RLNGQSTAKIAATVISANTNHSVIKRFPGGTALQGSADAPLYTTGGKPGN
JGIcombinedJ13530_1001044913	3300001213	Wetland	ANTNHKVIKRFPVEQRPHRGAAAPLYTTGGKPGN*
JGI20196J14858_10077061	3300001417	Arctic Peat Soil	PRRPNGHSTAKIAAAVISANTNHKVIKRFPVEQRPHRGAAAPLYTTGGKPGN*
JGI12635J15846_107444361	3300001593	Forest Soil	QSTAKTAAAVISANTNHSVIKRFPVEQRPHRGAAAPLYTTGGKSGN*
JGI12053J15887_105243303	3300001661	Forest Soil	SANTNHNIIKQVPTEQCQHRSTDAPLYTTGGKPGN*
JGIcombinedJ26739_1001430981	3300002245	Forest Soil	AAAVISANTNHSVIRRVPVQRRPQKGTDAPLYTRRGKPGN*
JGIcombinedJ26739_1003335653	3300002245	Forest Soil	AVVISANTNHNVIKRVPVKRRKHGAGAPLYTTGGNPGK*
JGIcombinedJ26739_1015078602	3300002245	Forest Soil	RPARLNGQSTAKIAAAVISANKNHNVIKSIPNGAHTQNADAPLYTSIAKPGN*
Ga0062384_1005659441	3300004082	Bog Forest Soil	KIAAAVISANTNHSVIKRVPVAPRTDAVAPLYTTGGKPGNWQLSR*
Ga0062389_1048484691	3300004092	Bog Forest Soil	AKIAATVISANKNHNVIKPVPSKRRPRGNADAPLYTTGAEPGN*
Ga0066603_102421992	3300004154	Freshwater	GQSTAKIAATVISANTNHSVIKQFPGEAAPYLQSADAPLYTTGGKPGN*
Ga0068868_1004913661	3300005338	Miscanthus Rhizosphere	IAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN*
Ga0070668_1015230211	3300005347	Switchgrass Rhizosphere	SGQSTAKIAATVISANTNHSIIEQVPVKRARGGRRLPLYTTGGEAGN*
Ga0070674_1011416162	3300005356	Miscanthus Rhizosphere	NGQSTAKIAATVISANTNHSVIKRFPGRNGASKASADAPLYTTGGKPGN*
Ga0070659_1018793132	3300005366	Corn Rhizosphere	IAATVISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN*
Ga0070710_102507331	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RLNGQSTAKIAATVISANTNHSVIKRFPGGRRLHIGTDAPLYTTGDKPGN*
Ga0070663_1000664741	3300005455	Corn Rhizosphere	GQSTAKIAATVISANTNHSVIKRFPGAKRRVQASADAPLYTTGGKPGN*
Ga0077121_106191882	3300005511	Arabidopsis Rhizosphere	RLNGQSTAKIAATVISANTNHSVIKQFPGDATPLFASADAPIYTTGGKPGN*
Ga0066695_101873433	3300005553	Soil	RPNGHSTAKIAAAVISANTNHNVIKQVPSEPCQHPGTDAPLYTTGGKPGN*
Ga0068854_1012306391	3300005578	Corn Rhizosphere	SANTNHSVIKQFPGGTALFRMRISAADAPLYTTGGKPGN*
Ga0068856_1016997222	3300005614	Corn Rhizosphere	RLNGQSTAKIAATVISANTNHSVIKRFPGGDAFTGSADASLYTTGGKPGN*
Ga0070702_1017072171	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN*
Ga0068864_1010863283	3300005618	Switchgrass Rhizosphere	STAKIAAAVISANTNHSIIKQVPAKQCQHRGTDAPLYTTGGKPGN*
Ga0073905_104391102	3300005655	Activated Sludge	AKIAATVISANTNHSVISQVPVERHHSQGTDAPLYTTGGDPGN*
Ga0068858_1018029941	3300005842	Switchgrass Rhizosphere	IAATVISANTNHSVIKRFPGTKRRVQAGADAPLYTTGGKPGN*
Ga0068862_1020743452	3300005844	Switchgrass Rhizosphere	RPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN*
Ga0070717_121598302	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NGQSTAKIAATVISANTNHNVIKRFPGGGTFQGGPDAPLYTTGGKPGN*
Ga0075368_105020461	3300006042	Populus Endosphere	KIAATVISANTNHSVIKRFPGAERRNQARADTPLYTTGGKPGN*
Ga0075024_1003051181	3300006047	Watersheds	VISANTNHSVIKRFPGAERRVQASADAPLYTTGGKPGN*
Ga0070712_1019383021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TAATVISANTNHKFISRVPVKRRSVRSADAPLYNTGGKPGN*
Ga0075362_104451032	3300006177	Populus Endosphere	GQITAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN*
Ga0075367_110862752	3300006178	Populus Endosphere	RLNGQSTAKIAATVISANTNHSVIKQFPGGATPFFASADAPIYTTGGKPGN*
Ga0074055_117627811	3300006573	Soil	TASSLPPAGAEEPRLNGQSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN*
Ga0075431_1008153982	3300006847	Populus Rhizosphere	TVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN*
Ga0066797_11667973	3300006864	Soil	NGQSTAKIAATVISANTNQSVIKWIPTEQRPRGRDAPLYTSGAEPGN*
Ga0075435_1000326071	3300007076	Populus Rhizosphere	NTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN*
Ga0099828_108644413	3300009089	Vadose Zone Soil	QSTAKIAAAVISANTNHNVIKQVPSEQCQRPGTDVPLYTTGGKPGN*
Ga0105245_114701722	3300009098	Miscanthus Rhizosphere	PACPEPPRLNGQSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN*
Ga0066709_1003559803	3300009137	Grasslands Soil	ISANTNHNVIKQFPTNGANGRTDAPLYTTGGKPGN*
Ga0114129_130335261	3300009147	Populus Rhizosphere	NTNHSVIKQFPGGTALFRMRISAADAPLYTTGGKPGN*
Ga0105243_129238131	3300009148	Miscanthus Rhizosphere	KIAATVISANTNHSVIKQFPGGTAPFRMRISAADAPLYTTGSKPGN*
Ga0134071_103800811	3300010336	Grasslands Soil	AKIAAAVISANTNHNVIKQVPSEPCQHPGTDAPLYTTGGKPGN*
Ga0138505_1000572191	3300010999	Soil	SLPPAGAEEARLNGQSTAKIAATVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN*
Ga0137362_109938983	3300012205	Vadose Zone Soil	PSFCGWPCRPNGHSTAKIAAAVISANTNHNVIKQVPSGQCQTEATDAPLYTTGGNPGN*
Ga0137380_103963671	3300012206	Vadose Zone Soil	STAKIAAAVISANTNHNVIKQVPSEQCQHSGTDAPLYTTGGKPGN*
Ga0137387_105670221	3300012349	Vadose Zone Soil	STAKIAAAVISANTNHNVIKQVPSEQCQHPGTDAPLYTTGGKPGN*
Ga0137371_103558361	3300012356	Vadose Zone Soil	APRPNGQSTAKIAATVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN*
Ga0137384_111662021	3300012357	Vadose Zone Soil	TVISANTNHSAMKRFPGVERRLREASRLPPLYTTGGKPGN*
Ga0137361_116510242	3300012362	Vadose Zone Soil	GQSTAKIAAAVISANTNHNVIERVPMKRRPHRGTDAPLYTTGGKPGNRQF*
Ga0137390_112629993	3300012363	Vadose Zone Soil	GQSTAKIAAAVISANTNHNAIERVPAAPGSADAPLYTTTAEPGN*
Ga0137398_108111151	3300012683	Vadose Zone Soil	LNGHSTAKIAAAVISANTNHNVIKRVPTARRPYGSANAPLYTTGGKPGN*
Ga0157305_102477632	3300012891	Soil	AATVISANTNHSVISQVPVQRRHRHGTDAPLYTTGGEPGN*
Ga0157297_100242171	3300012914	Soil	PRPNGQSTAKIAATVISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN*
Ga0137396_110795411	3300012918	Vadose Zone Soil	SLCGRPPRLNGHSTAKIAADVISANTNHSVIRRVPVQRRPQKGTDAPLYTRRGKPGN*
Ga0137359_112494721	3300012923	Vadose Zone Soil	RPNGQSTAKMAAAVISANTNHKLIKRVPTERRPHGSAIAPLYTTGAKPGN*
Ga0137416_103538073	3300012927	Vadose Zone Soil	PRLNGHSTAKIAAAVISANTNHSVIRRVPVLRRPQKGTDAPLYTRRGKPGN*
Ga0162651_1000426932	3300012938	Soil	ISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN*
Ga0164303_108447532	3300012957	Soil	AATVISANTNHSVIKRFPGAKRRVQAGAAAPLYNTGGKPGN*
Ga0164308_112931811	3300012985	Soil	STAKIAAAVISANTNHSIIKQVPAKQRQHRGTEAPLYTTGGKPGN*
Ga0164307_106463821	3300012987	Soil	PNGQSTAKIAAAVISANTNHSIIKQVPAKQCQHRGTDAPLYTTGGKPGN*
Ga0157375_103451481	3300013308	Miscanthus Rhizosphere	STAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN*
Ga0137412_100402971	3300015242	Vadose Zone Soil	SLPPLCGALRRPSGHSTANTAATVISANTNHKFISRVPVKRRSVRSADAPLYNTGGKPGN
Ga0137412_103340723	3300015242	Vadose Zone Soil	SFCGRAPRPNGQSTAKIAAAVISANTNHNVIERVPMKRRPHRGTDAPLYTTGGKPGNRQF
Ga0137409_108053373	3300015245	Vadose Zone Soil	ISANTNHSVIGRVPVQRRPQKGTDAPLYTRRGKPGN*
Ga0132258_111484391	3300015371	Arabidopsis Rhizosphere	SRPPARGRRLRPNGIRTAKIAAAVISANTNHNVIRAGSGGVLAGGTLAPLYTTLAKPGN*
Ga0184608_104724072	3300018028	Groundwater Sediment	GQSTAKIAATVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN
Ga0184619_103280393	3300018061	Groundwater Sediment	SLPSSCGWSRRPNGHSTAKIAAAVISANTNHNVIKQFPTNGANGRTDAPLYTTGGKPGN
Ga0190272_104700051	3300018429	Soil	KIAATVISANTNHSVISQVPVERRHRQGTDAPLYTTGGDPGN
Ga0190272_111780091	3300018429	Soil	ELRLNGQSTAKIAATVISANTNHSVIKRFPGGNGACEAGTDAPLYTTGGKPGN
Ga0190274_117724953	3300018476	Soil	PRLNGQSTAKIAATVISANTNHSVISQVPVERHHSQGTDAPLYTTGGDPGN
Ga0193727_11607081	3300019886	Soil	RPPRLNGQSTAKIAAAVISANTNHSVIERVPIRRPQKGTDAPLYTTGGKPGN
Ga0210397_101262161	3300021403	Soil	STAKIAATVISANTNHSIIERVPVKRRKSGACVPLYTTGGKGGN
Ga0210389_105650663	3300021404	Soil	RPSGQSTAKIAAAVISANTNHSVIKRVPGAPKTCADAPLYTTGGKPGNWQLLR
Ga0210409_106242342	3300021559	Soil	NGQSTAKIAATVISANTNHSIIERVPVKRRKSGACVPLYTTGGKGCN
Ga0247771_11056081	3300023267	Plant Litter	QSTAKIAATVISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN
Ga0247765_10159702	3300023268	Plant Litter	ISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN
Ga0208076_10669201	3300025464	Arctic Peat Soil	KIAAAVISANTNHKVIKRFPVEQRPHRGAAAPLYTTGGKPGN
Ga0207693_114364151	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VISANTNHKFISRVPVKRRSVRSADAPLYNTGGKPGN
Ga0207660_110941821	3300025917	Corn Rhizosphere	PRLNGQSTANIAATVISANTNHSVIKRFPGGNGACEAGTDAPLYTTGGKPGN
Ga0207657_102120501	3300025919	Corn Rhizosphere	TASLPPAWAEELRPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN
Ga0207694_105388122	3300025924	Corn Rhizosphere	PACAEEPRPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN
Ga0207669_113160552	3300025937	Miscanthus Rhizosphere	NGQSTAKIAATVISANTNHSVIKRFPGRNGASKASADAPLYTTGGKPGN
Ga0207679_109417662	3300025945	Corn Rhizosphere	VISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN
Ga0207658_109765892	3300025986	Switchgrass Rhizosphere	STAKIAATVISANTNHSVIKRFPGTKRRVQAGADAPLYTTGGKPGN
Ga0207639_105654131	3300026041	Corn Rhizosphere	PPACAEELRPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN
Ga0207678_103299902	3300026067	Corn Rhizosphere	PACPESPRLNGQSTAKIAATVISANKNHSVIKRFPGAKRRVQASADAPLYTTGGKPGN
Ga0207641_113057651	3300026088	Switchgrass Rhizosphere	SLPPACPEPPRLNGKSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPG
Ga0207674_100726481	3300026116	Corn Rhizosphere	EEPRPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN
Ga0207683_101500193	3300026121	Miscanthus Rhizosphere	PPRLNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQAGADAPLYTTGGKPGN
Ga0209801_13512632	3300026326	Soil	ANTNHSVIRRFPGAERRVQASADAPLYTTGGKPGN
Ga0209803_11015921	3300026332	Soil	PNGQSTAKIAATVISANTNHSVIRRFPGAERRVQASADAPLYTTGGKPGN
Ga0207949_10203791	3300026999	Forest Soil	NIAAAVISAKTNHRVIKPVPRRPDASANAPLYTTGAKPGN
Ga0208995_10331673	3300027388	Forest Soil	PRLNGHSTAKIAAAVISANTNHSVIRRVPVQRRPQKGTDAPLYTRRGKPGN
Ga0209734_10503043	3300027535	Forest Soil	CGRPPRRNGHSTAKIAAAVISANTNHSVIRRVPVQRRPQKGTDAPLYTRRGKPGN
Ga0209419_10926211	3300027537	Forest Soil	KSTAKIAAAVISANTNHNVIKRFRLNGANSGGTDAPLYTTAGKPGN
Ga0209331_10394601	3300027603	Forest Soil	QSTAKIAAAVISANTNHSVIERVPTKRRPGGSADTPLYTTGGKPGN
Ga0209217_11321221	3300027651	Forest Soil	STAKIAAAVISANTNHNVIKRVPTERRPGGSADTPLYTTGGKPGN
Ga0208991_11334403	3300027681	Forest Soil	KIAAAVISANTNHNVIERVPVKRRPHRGTDAPLYTRGGKPGNRQF
Ga0209626_10710801	3300027684	Forest Soil	RPNGHSTAKIAAAVISANTNHKVIKRFPVEQRPHRGAAAPLYTTGGKPGN
Ga0209813_104138551	3300027866	Populus Endosphere	AKIAATVISANTNHSVIKRFPGAERRNQARADTPLYTTGGKPGN
Ga0209283_102478281	3300027875	Vadose Zone Soil	GWPCRPNGQSTAKIAAAVISANTNHNVIKQVPSEQCQRPGTDVPLYTTGGKPGN
Ga0209624_101228291	3300027895	Forest Soil	AVISANTNHRVIKRFPVEQRPHRGAAAPLYTTGGKSGN
Ga0209624_101942713	3300027895	Forest Soil	AAVISANTNHRVIKRFPVEQRPHRGAAAPLYTTGGKPGN
Ga0209067_102547393	3300027898	Watersheds	SSANTNHNVIKRFPVEQRPHRGAAAPLYTTGGKPGN
Ga0209006_109362163	3300027908	Forest Soil	PNGQSTAKIAAAVISANTNHKVIKRVPVERRWPAGAMAPLYTRGGKPGN
Ga0209526_103788081	3300028047	Forest Soil	KIAAAVISANTNHKVIKRVPVERRWPAGAMAPLYTRGGKPGN
Ga0268264_118608801	3300028381	Switchgrass Rhizosphere	QSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN
Ga0137415_105943831	3300028536	Vadose Zone Soil	LPSLCGRPPRLNGHSTAKIAAAVISANTNHSVIRRVPVLRRPQKGTDAPLYTRRGKPGN
Ga0307303_100957781	3300028713	Soil	TASSLPPAGAEEPRLNGQSTAKIAATVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN
Ga0307288_101854572	3300028778	Soil	TVISANTNHSVIKRVPVQRRPHKGTDAPLYTTGGKPGN
Ga0307290_101203641	3300028791	Soil	ISANTNHSVIKRFPGAERRVQASADAPLYTTGGKPGN
Ga0307287_101178162	3300028796	Soil	PAGPEVPRLNGQSTAKIAATVISANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN
Ga0307292_104626962	3300028811	Soil	SSANINHSVIRRFPEAERRVQASADAPLYTTGGKPGN
Ga0311336_112006401	3300029990	Fen	KIAAAVISANTNHSVINQVPVQRRHTDGTHAPLYTTGGKPGN
Ga0311339_117140761	3300029999	Palsa	NGQSTAKIAATVISANTNHSAIKRFPVERRRYGDAAAPLYTTSGKPGNCQLPRQQDANFVKKGR
Ga0311348_113796211	3300030019	Fen	AATVISANTNHSVIKRFPGAKRRVQANADAPLYTTGGKPGN
Ga0302177_100925793	3300030053	Palsa	GQSTAKIAAAVISANTNHSVIKRVPVAPKTCADAPLYTTGGKPGNWQLLR
Ga0311372_120684253	3300030520	Palsa	LCGRPARPNGQSTAKIAAAVISANTNHSVIQRVPMDGANSQSADAPLYTTGGKPGK
Ga0310686_1014831331	3300031708	Soil	AKIAAAVISANTNHKVIKRFPVEQRPHRGAAAPLYTTGGKPGN
Ga0307478_108224781	3300031823	Hardwood Forest Soil	IAAAVISANTNHKVIKRFPVEQRPHRGTAAPLYTTGGKPGN
Ga0307410_120559691	3300031852	Rhizosphere	TTASLPPADAEEPRPNGQSTAKIAATVISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN
Ga0307416_1002123401	3300032002	Rhizosphere	GQSTAKIAATVISANTNHSVIKRFPGAKRRVQAGADAPLYTTGGKPGN
Ga0307415_1021584481	3300032126	Rhizosphere	NGQSTAKIAATVISANTNHSVIKRFPGAERRIQASADTPLYTTGGKPGN
Ga0307472_1020080752	3300032205	Hardwood Forest Soil	AATVISANTNHKFISRVPVKQRSVRSADAPLYNTGGKPGN
Ga0310811_105725641	3300033475	Soil	LRPNGQSTAKIAATVISANTNHSVIKRFPGTKRRVQASADAPLYTTGGKPAN
Ga0370486_151847_2_124	3300034126	Untreated Peat Soil	ATVINANINHSVIRRFPGAERRVQASADAPLYTTGGKPGN

Hidden Markov Model


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