Metagenome / Metatranscriptome Family F066962

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066962
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	61 residues
Representative Sequence	MNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Number of Associated Samples	85
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.03 %
% of genes near scaffold ends (potentially truncated)	53.17 %
% of genes from short scaffolds (< 2000 bps)	79.37 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.730 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.191 % of family members)
Environment Ontology (ENVO)	Unclassified (42.063 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.365 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.83% β-sheet: 0.00% Coil/Unstructured: 47.17%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13607	Succ_CoA_lig	11.90
PF13471	Transglut_core3	6.35
PF13557	Phenol_MetA_deg	3.17
PF12071	DUF3551	1.59
PF13380	CoA_binding_2	1.59
PF00685	Sulfotransfer_1	1.59
PF03972	MmgE_PrpD	1.59
PF00884	Sulfatase	1.59
PF00561	Abhydrolase_1	0.79
PF00702	Hydrolase	0.79
PF13185	GAF_2	0.79
PF00126	HTH_1	0.79
PF03466	LysR_substrate	0.79
PF00089	Trypsin	0.79
PF01370	Epimerase	0.79
PF03988	DUF347	0.79
PF00361	Proton_antipo_M	0.79
PF13419	HAD_2	0.79
PF03992	ABM	0.79
PF02586	SRAP	0.79
PF02371	Transposase_20	0.79
PF07568	HisKA_2	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.59
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.79
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.79
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
All Organisms	root	All Organisms	41.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
cellular organisms	root	All Organisms → cellular organisms	41.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.59 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.81 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.59 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.73 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.59 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.79 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.94 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.59 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.79 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	1.59 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.79 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.79 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.79 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.79 %
Xanthomonas hortorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	1.59 %
Sphingomonas sp. G-3-2-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. G-3-2-10	0.79 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.79 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.79 %
Xanthomonas hortorum pv. carotae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum → Xanthomonas hortorum pv. carotae	0.79 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.73 %
Bradyrhizobium cytisi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	1.59 %
Xanthomonas hortorum pv. carotae str. M081	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum → Xanthomonas hortorum pv. carotae → Xanthomonas hortorum pv. carotae str. M081	0.79 %
Sphingomonas sp. G-3-2-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. G-3-2-10	0.79 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.79 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.79 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.79 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JMYY3	Not Available	510	Open in IMG/M
3300000567\|JGI12270J11330_10014491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5089	Open in IMG/M
3300000567\|JGI12270J11330_10029264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	3252	Open in IMG/M
3300003505\|JGIcombinedJ51221_10011629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2890	Open in IMG/M
3300003505\|JGIcombinedJ51221_10088932	Not Available	1220	Open in IMG/M
3300004080\|Ga0062385_10625640	Not Available	684	Open in IMG/M
3300004121\|Ga0058882_1811963	Not Available	515	Open in IMG/M
3300004631\|Ga0058899_10002353	Not Available	580	Open in IMG/M
3300004635\|Ga0062388_100962652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. G-3-2-10	826	Open in IMG/M
3300005538\|Ga0070731_10432615	Not Available	875	Open in IMG/M
3300005538\|Ga0070731_11044045	Not Available	540	Open in IMG/M
3300005541\|Ga0070733_10943075	Not Available	580	Open in IMG/M
3300005542\|Ga0070732_10436492	Not Available	791	Open in IMG/M
3300005591\|Ga0070761_10210503	Not Available	1154	Open in IMG/M
3300005602\|Ga0070762_10202093	Not Available	1216	Open in IMG/M
3300005602\|Ga0070762_10223459	Not Available	1160	Open in IMG/M
3300005610\|Ga0070763_10306827	All Organisms → cellular organisms → Bacteria → FCB group	874	Open in IMG/M
3300005610\|Ga0070763_10358545	Not Available	813	Open in IMG/M
3300005921\|Ga0070766_10045617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2446	Open in IMG/M
3300005921\|Ga0070766_10172489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1337	Open in IMG/M
3300005921\|Ga0070766_10769691	Not Available	655	Open in IMG/M
3300006176\|Ga0070765_100019547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5024	Open in IMG/M
3300006176\|Ga0070765_100024493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4580	Open in IMG/M
3300006176\|Ga0070765_100092051	All Organisms → cellular organisms → Bacteria	2600	Open in IMG/M
3300006176\|Ga0070765_100117999	All Organisms → cellular organisms → Bacteria → Proteobacteria	2322	Open in IMG/M
3300006176\|Ga0070765_100734950	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300006176\|Ga0070765_101178674	Not Available	723	Open in IMG/M
3300006893\|Ga0073928_10063175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3259	Open in IMG/M
3300006893\|Ga0073928_10223872	All Organisms → cellular organisms → Bacteria → Proteobacteria	1456	Open in IMG/M
3300009519\|Ga0116108_1034523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1658	Open in IMG/M
3300009520\|Ga0116214_1025213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	2126	Open in IMG/M
3300009521\|Ga0116222_1095031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300009523\|Ga0116221_1008769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6007	Open in IMG/M
3300009525\|Ga0116220_10366667	Not Available	641	Open in IMG/M
3300009764\|Ga0116134_1142462	Not Available	849	Open in IMG/M
3300009824\|Ga0116219_10637544	Not Available	584	Open in IMG/M
3300010343\|Ga0074044_11015160	Not Available	544	Open in IMG/M
3300010379\|Ga0136449_100645243	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300010379\|Ga0136449_100709132	Not Available	1685	Open in IMG/M
3300011120\|Ga0150983_10637610	Not Available	598	Open in IMG/M
3300011120\|Ga0150983_16241030	Not Available	517	Open in IMG/M
3300011120\|Ga0150983_16673333	Not Available	637	Open in IMG/M
3300014638\|Ga0181536_10041678	All Organisms → cellular organisms → Bacteria	3165	Open in IMG/M
3300014657\|Ga0181522_10131200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300014657\|Ga0181522_10957396	Not Available	529	Open in IMG/M
3300015089\|Ga0167643_1004376	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300016705\|Ga0181507_1248019	Not Available	610	Open in IMG/M
3300016750\|Ga0181505_10460502	All Organisms → cellular organisms → Bacteria → Proteobacteria	1705	Open in IMG/M
3300017935\|Ga0187848_10454990	Not Available	525	Open in IMG/M
3300017935\|Ga0187848_10488772	Not Available	504	Open in IMG/M
3300018019\|Ga0187874_10210168	Not Available	806	Open in IMG/M
3300018040\|Ga0187862_10203514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1298	Open in IMG/M
3300019161\|Ga0184602_103012	Not Available	506	Open in IMG/M
3300019192\|Ga0184603_118725	Not Available	515	Open in IMG/M
3300019258\|Ga0181504_1396634	Not Available	531	Open in IMG/M
3300019888\|Ga0193751_1058231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300020021\|Ga0193726_1000020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	470597	Open in IMG/M
3300020579\|Ga0210407_10157318	All Organisms → cellular organisms → Bacteria → Proteobacteria	1754	Open in IMG/M
3300020581\|Ga0210399_10330063	Not Available	1273	Open in IMG/M
3300020581\|Ga0210399_10409810	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300020581\|Ga0210399_10745453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300020583\|Ga0210401_10030191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5163	Open in IMG/M
3300020583\|Ga0210401_10256103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cytisi	1610	Open in IMG/M
3300020583\|Ga0210401_10805130	Not Available	799	Open in IMG/M
3300021168\|Ga0210406_10850525	Not Available	690	Open in IMG/M
3300021170\|Ga0210400_10793555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	776	Open in IMG/M
3300021180\|Ga0210396_11207007	Not Available	633	Open in IMG/M
3300021181\|Ga0210388_10910601	Not Available	758	Open in IMG/M
3300021181\|Ga0210388_11198271	Not Available	644	Open in IMG/M
3300021401\|Ga0210393_10015461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5905	Open in IMG/M
3300021403\|Ga0210397_10623191	Not Available	825	Open in IMG/M
3300021405\|Ga0210387_11394803	Not Available	603	Open in IMG/M
3300021433\|Ga0210391_10111039	Not Available	2159	Open in IMG/M
3300021433\|Ga0210391_10167873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1728	Open in IMG/M
3300021474\|Ga0210390_10726224	Not Available	826	Open in IMG/M
3300021474\|Ga0210390_11355279	Not Available	568	Open in IMG/M
3300021475\|Ga0210392_10388294	Not Available	1016	Open in IMG/M
3300021475\|Ga0210392_11478904	Not Available	508	Open in IMG/M
3300021477\|Ga0210398_10013898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7021	Open in IMG/M
3300021477\|Ga0210398_10059051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3136	Open in IMG/M
3300021479\|Ga0210410_10181779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas hortorum → Xanthomonas hortorum pv. carotae → Xanthomonas hortorum pv. carotae str. M081	1881	Open in IMG/M
3300022506\|Ga0242648_1097629	Not Available	509	Open in IMG/M
3300022522\|Ga0242659_1079124	Not Available	623	Open in IMG/M
3300022529\|Ga0242668_1065681	Not Available	677	Open in IMG/M
3300022557\|Ga0212123_10110460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300022557\|Ga0212123_10164641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1691	Open in IMG/M
3300022709\|Ga0222756_1070945	Not Available	555	Open in IMG/M
3300022722\|Ga0242657_1254176	Not Available	505	Open in IMG/M
3300022724\|Ga0242665_10320848	Not Available	547	Open in IMG/M
3300023541\|Ga0247544_102021	Not Available	564	Open in IMG/M
3300023547\|Ga0247554_104356	Not Available	578	Open in IMG/M
3300023551\|Ga0247546_106482	Not Available	505	Open in IMG/M
3300024225\|Ga0224572_1022166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1221	Open in IMG/M
3300027439\|Ga0209332_1003733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3229	Open in IMG/M
3300027528\|Ga0208985_1111352	Not Available	523	Open in IMG/M
3300027568\|Ga0208042_1060032	Not Available	969	Open in IMG/M
3300027570\|Ga0208043_1039323	Not Available	1425	Open in IMG/M
3300027855\|Ga0209693_10021243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3131	Open in IMG/M
3300027884\|Ga0209275_10431150	Not Available	746	Open in IMG/M
3300027884\|Ga0209275_10643805	Not Available	609	Open in IMG/M
3300027884\|Ga0209275_10814638	Not Available	538	Open in IMG/M
3300027889\|Ga0209380_10482979	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300027889\|Ga0209380_10842748	Not Available	517	Open in IMG/M
3300027908\|Ga0209006_10017956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	6418	Open in IMG/M
3300028906\|Ga0308309_10007633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6634	Open in IMG/M
3300028906\|Ga0308309_10022273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4203	Open in IMG/M
3300028906\|Ga0308309_10026101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3931	Open in IMG/M
3300028906\|Ga0308309_10035291	All Organisms → cellular organisms → Bacteria	3476	Open in IMG/M
3300028906\|Ga0308309_10178377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1733	Open in IMG/M
3300028906\|Ga0308309_10595456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300028906\|Ga0308309_11087629	Not Available	691	Open in IMG/M
3300029701\|Ga0222748_1066827	Not Available	647	Open in IMG/M
3300030740\|Ga0265460_12197137	Not Available	580	Open in IMG/M
3300030878\|Ga0265770_1114704	Not Available	561	Open in IMG/M
3300030880\|Ga0265776_110039	Not Available	557	Open in IMG/M
3300030999\|Ga0074019_11114681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1112	Open in IMG/M
3300031057\|Ga0170834_111220860	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300031708\|Ga0310686_105733213	Not Available	575	Open in IMG/M
3300031708\|Ga0310686_108957789	Not Available	749	Open in IMG/M
3300032160\|Ga0311301_10464726	Not Available	1897	Open in IMG/M
3300032160\|Ga0311301_11354333	Not Available	893	Open in IMG/M
3300032174\|Ga0307470_10931983	Not Available	685	Open in IMG/M
3300032515\|Ga0348332_10200356	Not Available	518	Open in IMG/M
3300032515\|Ga0348332_12163991	Not Available	696	Open in IMG/M
3300032515\|Ga0348332_12439606	Not Available	618	Open in IMG/M
3300032756\|Ga0315742_12104307	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.21%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.92%
Aquatic	Environmental → Aquatic	14.29%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.54%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.38%
Loam	Environmental → Terrestrial → Soil → Loam	29.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	29.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.52%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	21.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.38%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019161	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023541	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023547	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030880	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030999	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_08111270	2170459003	Grass Soil	ECRRRGRTKEINAMNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
JGI12270J11330_100144914	3300000567	Peatlands Soil	MNSFGFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
JGI12270J11330_100292642	3300000567	Peatlands Soil	MNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
JGIcombinedJ51221_100116292	3300003505	Forest Soil	MNASNIGLDLADDQILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA*
JGIcombinedJ51221_100889322	3300003505	Forest Soil	MNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0062385_106256402	3300004080	Bog Forest Soil	MNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0058882_18119631	3300004121	Forest Soil	MNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV*
Ga0058899_100023532	3300004631	Forest Soil	MNSFVFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0062388_1009626521	3300004635	Bog Forest Soil	RGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070731_104326151	3300005538	Surface Soil	WRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070731_110440452	3300005538	Surface Soil	WRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070733_109430752	3300005541	Surface Soil	MNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070732_104364921	3300005542	Surface Soil	MNANSFALDLTEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070761_102105032	3300005591	Soil	MNLTSMGLGLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA*
Ga0070762_102020932	3300005602	Soil	MNLTGMGLGLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA*
Ga0070762_102234592	3300005602	Soil	MNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070763_103068271	3300005610	Soil	CRRRGRTKEINAMNVNSFGLDLADEQILIDDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070763_103585452	3300005610	Soil	MNLTSMGSVLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA*
Ga0070766_100456174	3300005921	Soil	MNDSFGFDLADQQILNDELSDEVLERAGGLENRAGLTIAACSGLSSCPSAPA*
Ga0070766_101724892	3300005921	Soil	MNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV*
Ga0070766_107696912	3300005921	Soil	CRRRGRTKEINAMNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070765_1000195474	3300006176	Soil	MNASNIGLDLADDEILNDEFSDEALERVGGLENRAGVTIAMCSGLSSCPSAPA*
Ga0070765_1000244935	3300006176	Soil	MNCSFARSLPARGPTKEINAMNVANFGLDLADDRILNDELSDEAIERAGGLENRAGLTLAMCSGLSSCPSAPA*
Ga0070765_1000920514	3300006176	Soil	GSAKQLMAADCRRCRRTKGINAMNLTSMGLGLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA*
Ga0070765_1001179991	3300006176	Soil	AECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070765_1007349501	3300006176	Soil	MNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0070765_1011786741	3300006176	Soil	TTPLPAECRRRGRTKEINAMNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0073928_100631753	3300006893	Iron-Sulfur Acid Spring	MNVNSFGLDLADEQILNDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0073928_102238722	3300006893	Iron-Sulfur Acid Spring	MNVNSFGLDLAEEQILIDDLSDEVLERAGGLANRAGYTIAMCSGLSSCPSAPA*
Ga0116108_10345231	3300009519	Peatland	MNSMNANSFGLDLTEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0116214_10252131	3300009520	Peatlands Soil	VPALGRTKEINAMNVNSFGLDLAEEKILIDELSDEALERAGGLENRAGYTIAMCSG
Ga0116222_10950311	3300009521	Peatlands Soil	SFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0116221_10087691	3300009523	Peatlands Soil	AAGEPKEINAMNSFGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0116220_103666672	3300009525	Peatlands Soil	FRQTTPLPAECRRRGRTKEINAMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0116134_11424622	3300009764	Peatland	LPAECRRRGRTKEINAMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0116219_106375442	3300009824	Peatlands Soil	AMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0074044_110151601	3300010343	Bog Forest Soil	MNVNSFGLDSAEELILDNELSDEALERAGGLDNRAALTIAMCSGLGSCPSAPA*
Ga0136449_1006452432	3300010379	Peatlands Soil	MNVNSFGFDLADEQILNDELSDEVLERAGGLENRAGLTIAACSGLSSCPSAPA*
Ga0136449_1007091322	3300010379	Peatlands Soil	VPWANEEVSAMNVNSFGLDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0150983_106376102	3300011120	Forest Soil	FRQTTPLPAECRRRGRTKEINAMNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV*
Ga0150983_162410301	3300011120	Forest Soil	LWRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQLLNVELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0150983_166733332	3300011120	Forest Soil	WRGFRQTTPLPAECRRRGRTKEINAMNSFVFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0181536_100416781	3300014638	Bog	RIDGDRSLAHNVVWRGFRQTTPLPAECRRRGRTKEINAMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA*
Ga0181522_101312001	3300014657	Bog	PLPAECRRRGRTKEINAMNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0181522_109573962	3300014657	Bog	VNSFGLDLADEQILNDELSDEALERAGGLENRAGITIAMCSGLSSCPSAPA*
Ga0167643_10043761	3300015089	Glacier Forefield Soil	MNVNSFGLDLAEEQILIDDLSDEVLERAGGLENRAGYTIAMCSGLSSCPSAPA*
Ga0181507_12480191	3300016705	Peatland	MPVESKAGNRITPLPAECRRRGRTKEINAMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0181505_104605022	3300016750	Peatland	FDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0187848_104549901	3300017935	Peatland	MNANSFGLDLTEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0187848_104887721	3300017935	Peatland	MNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0187874_102101682	3300018019	Peatland	MNVNSYGFALAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0187862_102035141	3300018040	Peatland	LIVGRRGRTEGMNSMNANSFGLDLTEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0184602_1030121	3300019161	Soil	MNVNSFGLDLAEEQILIDDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0184603_1187251	3300019192	Soil	FRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENKAGITIAMCSGLSSCPSAPA
Ga0181504_13966341	3300019258	Peatland	FRQTTPLPAECRRRGRTKEINAMNVNSYGFDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0193751_10582311	3300019888	Soil	MNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0193726_100002019	3300020021	Soil	MNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210407_101573182	3300020579	Soil	DHNVVWRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210399_103300633	3300020581	Soil	MNASNIGLDLADDQILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0210399_104098101	3300020581	Soil	ECRRRGRTKEINAMNVNSFGLDLAEEQILIDDLSDEVLERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210399_107454533	3300020581	Soil	MNCSFARSLPARGPTKEINAMNVANFGLDLADDRILNDELSDEAIERAGGLENRAGLTLAMC
Ga0210401_100301916	3300020583	Soil	MNVNSFGLDLAEEQILIDELSDEVLERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210401_102561034	3300020583	Soil	MNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210401_108051301	3300020583	Soil	HNMVWRGFRQTTPLPAECRRRGRTKEINAMNSFVFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210406_108505252	3300021168	Soil	MNVNSFGLDLAEEQILIDDLSDEVLERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210400_107935552	3300021170	Soil	DLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0210396_112070071	3300021180	Soil	VNSFGLDLADEQILIDDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210388_109106011	3300021181	Soil	KGINAMNLTSMGSVLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA
Ga0210388_111982711	3300021181	Soil	PTKEGNIMNASNIGLDLADDQILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0210393_100154614	3300021401	Soil	MNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0210397_106231911	3300021403	Soil	RTKEINAMNVNSFGFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210387_113948031	3300021405	Soil	PPIAGACGPTEEGNTMNASNIGLDLADDEILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0210391_101110393	3300021433	Soil	MNVNSFGLDLAEEQLLNVELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0210391_101678731	3300021433	Soil	TKEGNIMNASNIGLDLADDQILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0210390_107262241	3300021474	Soil	DHNAYWRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210390_113552791	3300021474	Soil	TKEINAMNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0210392_103882942	3300021475	Soil	MNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210392_114789041	3300021475	Soil	EINAMNVNSFGLDLAEEQILIDDLSDEVLERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210398_100138982	3300021477	Soil	MNLNSFGLDWAEEQMLIDDLSDEALERAGLDSGRAALTIAMCSGLGSCPSAPA
Ga0210398_100590514	3300021477	Soil	MNSFVFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0210410_101817793	3300021479	Soil	AECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0242648_10976291	3300022506	Soil	KEINAMNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0242659_10791241	3300022522	Soil	PLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0242668_10656811	3300022529	Soil	MIPTPMPAECRRRGRTKEINAMNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0212123_101104602	3300022557	Iron-Sulfur Acid Spring	TTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0212123_101646412	3300022557	Iron-Sulfur Acid Spring	MNVNSFGLDLADEQILNDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0222756_10709451	3300022709	Soil	LWRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0242657_12541761	3300022722	Soil	DKQHLRLPEYRRRGRTKEINAMNVNSFGLDLADEQILNDELSDEALERAGGLENRAGITIAMCSGLSSCPSAPA
Ga0242665_103208481	3300022724	Soil	MNVNSFGLDLAEEQILIDDLSDEALERAGGLEMRAGYTIAMCSGLSSCPSAPA
Ga0247544_1020211	3300023541	Soil	QTTPLPAECRRRGRTKEINAMNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0247554_1043562	3300023547	Soil	WRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0247546_1064821	3300023551	Soil	QTTPLPAECRRRGRTKEINAMNVNSFGFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0224572_10221661	3300024225	Rhizosphere	MNDSFGFDLADQQILNDELSDEVLERAGGLENRAGLTIAACSGLSSCPSAPA
Ga0209332_10037333	3300027439	Forest Soil	MNVNSFGLDLADEQILNDELSDEALERAGGLENRAGITIAMCSGLSSCPSAPA
Ga0208985_11113521	3300027528	Forest Soil	MNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0208042_10600321	3300027568	Peatlands Soil	MNSFGFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0208043_10393233	3300027570	Peatlands Soil	MNVNSYGFDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSC
Ga0209693_100212432	3300027855	Soil	MNLTSMGLGLAEEQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA
Ga0209275_104311502	3300027884	Soil	NSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPV
Ga0209275_106438051	3300027884	Soil	HNVLWRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0209275_108146382	3300027884	Soil	CRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0209380_104829792	3300027889	Soil	MNVNSFGLDLADEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAP
Ga0209380_108427481	3300027889	Soil	MNVNSFGLDLAEEQILNDELSDEALERAGGLEMRAGYTIAMCSGLSSCPSAPA
Ga0209006_100179562	3300027908	Forest Soil	MNVNSFGLDLADEQILIDDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0308309_100076336	3300028906	Soil	MNVNSFGLDLAEEQILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0308309_100222735	3300028906	Soil	MNCSFARSLPARGPTKEINAMNVANFGLDLADDRILNDELSDEAIERAGGLENRAGLTLAMCSGLSSCPSAPA
Ga0308309_100261014	3300028906	Soil	MNASNIGLDLADDEILNDEFSDEALERVGGLENRAGVTIAMCSGLSSCPSAPA
Ga0308309_100352911	3300028906	Soil	LPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0308309_101783772	3300028906	Soil	MNVNSFGLDLADEQILIDELSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0308309_105954561	3300028906	Soil	NAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0308309_110876291	3300028906	Soil	PTKEDNIMNASNIGLDLADDQILNDEFSDEALERAGGLENRAGLTIAMCSGLSSCPSAPA
Ga0222748_10668271	3300029701	Soil	QTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0265460_121971371	3300030740	Soil	RGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLADELILNNDLSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0265770_11147042	3300030878	Soil	VNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0265776_1100392	3300030880	Soil	FRQTTPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0074019_111146813	3300030999	Soil	ADCRRCRRTKGINAMNLTSMGLGLAEVQIFNEELSDEALERAGMDAGREALTIAMCSGLSSCPSAPA
Ga0170834_1112208602	3300031057	Forest Soil	RRGRTKEINAMNVNSFGLDLAEELILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0310686_1057332131	3300031708	Soil	WRGFRQTTPLPAECRRRGRTKEINAMNVNSFGLDLADEQILNDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0310686_1089577891	3300031708	Soil	MNVNSFGLDLAEEKILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0311301_104647262	3300032160	Peatlands Soil	MNVNSFGLDLAEEQILIDELSDEALERAGGLETRAGLTIAMCSGLGSCPSAPA
Ga0311301_113543331	3300032160	Peatlands Soil	MNVNSFGLDSAEELILDNELSDEALERAGGLDNRAALTIAMCSGLGSCPSAPA
Ga0307470_109319831	3300032174	Hardwood Forest Soil	AMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0348332_102003561	3300032515	Plant Litter	MNGIDNGTDQAEDQMLNDELSDQALERAGGLEGRAKLTIAMCSGLSSCPSAPA
Ga0348332_121639912	3300032515	Plant Litter	FRQTTPLPAECRRRGRTKEINAMNVNSFGLDLADEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0348332_124396061	3300032515	Plant Litter	TPLPAECRRRGRTKEINAMNVNSFGLDLAEEQILIDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA
Ga0315742_121043071	3300032756	Forest Soil	TPLPAECRRRGRTKEINAMNVNSFGLDLADEQILNDELSDEALERAGGLENRAGYTIAMCSGLSSCPSAPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066962

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences