Metagenome / Metatranscriptome Family F066946

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	99 residues
Representative Sequence	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPMAGS
Number of Associated Samples	91
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.71 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	75.40 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.206 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (30.952 % of family members)
Environment Ontology (ENVO)	Unclassified (27.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.349 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.92% β-sheet: 0.00% Coil/Unstructured: 53.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.58.1.3: Malic enzyme N-domain	d1llqa2	1llq	0.60688
c.58.1.0: automated matches	d7mf4a1	7mf4	0.59865
d.157.1.0: automated matches	d6n36a_	6n36	0.5211
d.157.1.1: Zn metallo-beta-lactamase	d1k07a_	1k07	0.51681
d.157.1.0: automated matches	d6dqha_	6dqh	0.5167

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF04264	YceI	3.97
PF08241	Methyltransf_11	3.97
PF00106	adh_short	3.17
PF13649	Methyltransf_25	3.17
PF08044	DUF1707	2.38
PF03459	TOBE	2.38
PF13559	DUF4129	1.59
PF02909	TetR_C_1	1.59
PF00583	Acetyltransf_1	1.59
PF00528	BPD_transp_1	0.79
PF01850	PIN	0.79
PF01741	MscL	0.79
PF13578	Methyltransf_24	0.79
PF08402	TOBE_2	0.79
PF04545	Sigma70_r4	0.79
PF02720	DUF222	0.79
PF13460	NAD_binding_10	0.79
PF08843	AbiEii	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	3.97
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	1.59
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	97.62 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	97.62 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	84.92 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	75.40 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	39.68 %
Streptosporangiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis	5.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.79 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.79 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	39.68 %
Allonocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis	5.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	39.68 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	5.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.79 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	39.68 %
Allonocardiopsis opalescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	5.56 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Catenulispora acidiphila DSM 44928	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila → Catenulispora acidiphila DSM 44928	0.79 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.79 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH02GC00N	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	532	Open in IMG/M
3300004092\|Ga0062389_100303726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1664	Open in IMG/M
3300004092\|Ga0062389_100624559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1244	Open in IMG/M
3300005435\|Ga0070714_100344001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1399	Open in IMG/M
3300005437\|Ga0070710_10604331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	764	Open in IMG/M
3300005467\|Ga0070706_100162574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2085	Open in IMG/M
3300005537\|Ga0070730_10639427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	677	Open in IMG/M
3300005541\|Ga0070733_10629125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	720	Open in IMG/M
3300005542\|Ga0070732_10182625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1252	Open in IMG/M
3300005591\|Ga0070761_10194364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1201	Open in IMG/M
3300005591\|Ga0070761_11078844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	511	Open in IMG/M
3300005602\|Ga0070762_10697379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	681	Open in IMG/M
3300005610\|Ga0070763_10106430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1420	Open in IMG/M
3300005712\|Ga0070764_10357146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300005842\|Ga0068858_101034441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	805	Open in IMG/M
3300005950\|Ga0066787_10001112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3642	Open in IMG/M
3300006028\|Ga0070717_10044966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3608	Open in IMG/M
3300006176\|Ga0070765_100672259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	978	Open in IMG/M
3300009098\|Ga0105245_10608662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1120	Open in IMG/M
3300009101\|Ga0105247_10588629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	823	Open in IMG/M
3300009545\|Ga0105237_12033013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	583	Open in IMG/M
3300009553\|Ga0105249_12220624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	622	Open in IMG/M
3300009623\|Ga0116133_1073878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	853	Open in IMG/M
3300009672\|Ga0116215_1421019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	578	Open in IMG/M
3300010339\|Ga0074046_10029278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3767	Open in IMG/M
3300010343\|Ga0074044_10293198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1070	Open in IMG/M
3300010373\|Ga0134128_10396371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1541	Open in IMG/M
3300010373\|Ga0134128_12109158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	621	Open in IMG/M
3300010379\|Ga0136449_100365733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2581	Open in IMG/M
3300010379\|Ga0136449_103826650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	566	Open in IMG/M
3300010397\|Ga0134124_12454042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	563	Open in IMG/M
3300010866\|Ga0126344_1379409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	880	Open in IMG/M
3300010866\|Ga0126344_1406537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	548	Open in IMG/M
3300010876\|Ga0126361_10315888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1057	Open in IMG/M
3300010876\|Ga0126361_10392955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2755	Open in IMG/M
3300012181\|Ga0153922_1043402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	999	Open in IMG/M
3300012210\|Ga0137378_10350635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1371	Open in IMG/M
3300013104\|Ga0157370_11055562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	735	Open in IMG/M
3300013297\|Ga0157378_10781016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	980	Open in IMG/M
3300014169\|Ga0181531_10198547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1218	Open in IMG/M
3300014169\|Ga0181531_10223046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila → Catenulispora acidiphila DSM 44928	1147	Open in IMG/M
3300014654\|Ga0181525_10029626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3282	Open in IMG/M
3300014838\|Ga0182030_10109227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3757	Open in IMG/M
3300014838\|Ga0182030_11259430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	627	Open in IMG/M
3300014968\|Ga0157379_11549419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	646	Open in IMG/M
3300017937\|Ga0187809_10053935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1301	Open in IMG/M
3300017948\|Ga0187847_10265211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	937	Open in IMG/M
3300017975\|Ga0187782_10330933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1151	Open in IMG/M
3300018007\|Ga0187805_10270868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	779	Open in IMG/M
3300018047\|Ga0187859_10897798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	510	Open in IMG/M
3300020580\|Ga0210403_10990823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	658	Open in IMG/M
3300020582\|Ga0210395_10025923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4304	Open in IMG/M
3300021181\|Ga0210388_10392708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300021181\|Ga0210388_10668665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	906	Open in IMG/M
3300021402\|Ga0210385_10857420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	697	Open in IMG/M
3300021402\|Ga0210385_11082617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	616	Open in IMG/M
3300021407\|Ga0210383_10731550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	849	Open in IMG/M
3300021433\|Ga0210391_10488508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	967	Open in IMG/M
3300021474\|Ga0210390_10020614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5363	Open in IMG/M
3300021476\|Ga0187846_10095406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	1283	Open in IMG/M
3300025898\|Ga0207692_10871772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	591	Open in IMG/M
3300025910\|Ga0207684_10131822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2145	Open in IMG/M
3300025928\|Ga0207700_10491391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1085	Open in IMG/M
3300026078\|Ga0207702_11453824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	679	Open in IMG/M
3300026214\|Ga0209838_1003137	All Organisms → cellular organisms → Bacteria	2339	Open in IMG/M
3300027165\|Ga0208608_114915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	517	Open in IMG/M
3300027648\|Ga0209420_1145187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	653	Open in IMG/M
3300027842\|Ga0209580_10393940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	690	Open in IMG/M
3300027857\|Ga0209166_10488470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	633	Open in IMG/M
3300027879\|Ga0209169_10500519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	638	Open in IMG/M
3300027884\|Ga0209275_10820974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	536	Open in IMG/M
3300028742\|Ga0302220_10021319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3089	Open in IMG/M
3300028742\|Ga0302220_10311354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300028742\|Ga0302220_10362596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	522	Open in IMG/M
3300028773\|Ga0302234_10111519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1200	Open in IMG/M
3300028780\|Ga0302225_10020507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3356	Open in IMG/M
3300028789\|Ga0302232_10007265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6947	Open in IMG/M
3300028789\|Ga0302232_10509640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	591	Open in IMG/M
3300028789\|Ga0302232_10693272	Not Available	500	Open in IMG/M
3300028879\|Ga0302229_10200572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	912	Open in IMG/M
3300028879\|Ga0302229_10231203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	840	Open in IMG/M
3300028906\|Ga0308309_11588040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	557	Open in IMG/M
3300029882\|Ga0311368_10046987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3968	Open in IMG/M
3300029882\|Ga0311368_11152618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	500	Open in IMG/M
3300029910\|Ga0311369_11136374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	608	Open in IMG/M
3300029943\|Ga0311340_10108857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3025	Open in IMG/M
3300029943\|Ga0311340_10152831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2413	Open in IMG/M
3300029943\|Ga0311340_10251078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1726	Open in IMG/M
3300029943\|Ga0311340_10342729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300029943\|Ga0311340_10739729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	837	Open in IMG/M
3300029943\|Ga0311340_10883732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	745	Open in IMG/M
3300029999\|Ga0311339_10206084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2216	Open in IMG/M
3300029999\|Ga0311339_10529772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	1190	Open in IMG/M
3300029999\|Ga0311339_10549339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1162	Open in IMG/M
3300029999\|Ga0311339_10682738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1007	Open in IMG/M
3300029999\|Ga0311339_11060617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	754	Open in IMG/M
3300030007\|Ga0311338_10301596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1768	Open in IMG/M
3300030013\|Ga0302178_10379804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens	634	Open in IMG/M
3300030057\|Ga0302176_10143706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	944	Open in IMG/M
3300030058\|Ga0302179_10364620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	636	Open in IMG/M
3300030520\|Ga0311372_11565343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	806	Open in IMG/M
3300030524\|Ga0311357_10052032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4183	Open in IMG/M
3300030580\|Ga0311355_10165927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2353	Open in IMG/M
3300030580\|Ga0311355_11654107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	548	Open in IMG/M
3300030617\|Ga0311356_10594959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300030740\|Ga0265460_12532713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	547	Open in IMG/M
3300031027\|Ga0302308_10826177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	514	Open in IMG/M
3300031233\|Ga0302307_10043424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2422	Open in IMG/M
3300031234\|Ga0302325_10130682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4572	Open in IMG/M
3300031525\|Ga0302326_10179958	All Organisms → cellular organisms → Bacteria	3574	Open in IMG/M
3300031525\|Ga0302326_10332181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2404	Open in IMG/M
3300031525\|Ga0302326_11312246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	985	Open in IMG/M
3300031708\|Ga0310686_100048268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4207	Open in IMG/M
3300031708\|Ga0310686_100289601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2634	Open in IMG/M
3300031708\|Ga0310686_102259742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1048	Open in IMG/M
3300031708\|Ga0310686_110095968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1079	Open in IMG/M
3300031708\|Ga0310686_111615296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	669	Open in IMG/M
3300031708\|Ga0310686_114341398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3474	Open in IMG/M
3300031708\|Ga0310686_114450209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1266	Open in IMG/M
3300031782\|Ga0318552_10347908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	755	Open in IMG/M
3300031799\|Ga0318565_10506351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300032160\|Ga0311301_10305667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2541	Open in IMG/M
3300032160\|Ga0311301_11538282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	816	Open in IMG/M
3300032770\|Ga0335085_10509851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1371	Open in IMG/M
3300032895\|Ga0335074_10047995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5892	Open in IMG/M
3300033818\|Ga0334804_019860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2354	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.06%
Host-Associated	Host-Associated	7.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.13%
Aquatic	Environmental → Aquatic	7.94%
Plants	Host-Associated → Plants	7.14%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.59%
Peat	Environmental → Terrestrial → Peat	31.75%
Freshwater	Environmental → Aquatic → Freshwater	7.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.59%
Cave	Environmental → Terrestrial → Cave	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	31.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.16%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	31.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	30.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.97%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.59%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.79%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_09403930	2124908008	Soil	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYERLKRLAEREDDQRMRVFKEELRQALADPSQLPGDELDNAVEFTDENEAAFLRRLWRDLYGDEPT
Ga0062389_1003037262	3300004092	Bog Forest Soil	LSAFYWERHPDGPFATLIAVTATYCSPDAYDGAYEDLVSRARAAKAADDEMRAFKDELRQALTDPMQLPEGELDDAVEYNEESDEKFLRRVWRGLYGGEPAPDPEGPRR*
Ga0062389_1006245593	3300004092	Bog Forest Soil	VTGFYWERHPSGPFATLIAVAATYCSPDADADDYDRLKRLVKREDNEQMQVFKAELRQALTNPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDEPIAGS*
Ga0070714_1003440011	3300005435	Agricultural Soil	VTGFYWERHPDGPFATLIAVAATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0070710_106043311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTGFYWERHPDGPFATLIAATATYCSPDAYDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYNDEPT*
Ga0070706_1001625743	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSAFYWQRHPNGPFATLIGVAATYCGPDAYDGAYQDLVRRARAAEADDDEMRVFKAELRQALADPAALPDEELSEAVEYNDGSDERFLRRVWRDLYGDEPVAGA*
Ga0070730_106394271	3300005537	Surface Soil	VSAFYWERHPDGPFATLIGVAATYCGPDAYDGAYRDLVRRARAADASDDEMRTFKAELQQALADPGALPDEELSEAVEYDDGSDERFLRRVWRDLYGDEPVAGA*
Ga0070733_106291252	3300005541	Surface Soil	MGAFYLERHPDGPLVTLIAVAATYCSPDACDGDYDDLIIRARKPDPSDEEIRAFTAELRQALADPGQLPAGELSVAVEYDDGSDEGFLRRLWRDLYSDRPPTRP*
Ga0070732_101826252	3300005542	Surface Soil	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYGDLVRRARSPEPDDDEIRVFKDELRRGLASPAELPHDELSDAVEYDDGSDERFLRRLWRDLYGDEAV*
Ga0070761_101943642	3300005591	Soil	VSTFYWERHPEGPFATLIAVAASYCSPDAYDGAYDDLVRRARSAEADDDEMRVFKAELRQALADPSRLPRGELSAAVEYDDGSDEKFLHRLWHDLYGDESVS*
Ga0070761_110788442	3300005591	Soil	VSAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRRLW
Ga0070762_106973791	3300005602	Soil	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEIRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRGLWHDLYGDEPIAGS*
Ga0070763_101064302	3300005610	Soil	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEIRVFKAELRQALTDPSQLPAGELDDAVAYDDGSDEKFLRGLWHDLYGDEPIAGS*
Ga0070764_103571462	3300005712	Soil	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNEQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDASIAGS*
Ga0068858_1010344411	3300005842	Switchgrass Rhizosphere	VTGFYWERHPDGPFTTLIAVTATYCSPDADADDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPT*
Ga0066787_100011122	3300005950	Soil	VSAFYWERHPDGPFTTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEIRVFKAELRRALADPSQLPAGELDDAVEYDDGSDENFLRRLWRDLYGDEPIARS*
Ga0070717_100449662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSPFYWERHPDGPFATLIRIATTYCSPDADEDAYAGLKRLAKRENVEEMRVFKDELREALRDPTRLPDDELSESVEYDDGSTEAFLRRLWHDLYGDEPIDMPSGHAT*
Ga0070765_1006722592	3300006176	Soil	ATLIAVAASYCSPDAYDGAYDDLVRRARSAEADDDEMRVFKAELRQALADPSRLPRGELSAAVEYDDGSDEKFLHRLWHDLYGDESVS*
Ga0105245_106086621	3300009098	Miscanthus Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0105247_105886292	3300009101	Switchgrass Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPT*
Ga0105237_120330131	3300009545	Corn Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPT*
Ga0105249_122206241	3300009553	Switchgrass Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELENAVEFTDENEAAFLRRLWR
Ga0116133_10738782	3300009623	Peatland	VNAFYWERHPDGPFATLIGVSATYCSPDAYDGACEDLVSRARSPQADDDEMRVFKAELRRALADPGQLPAGELDDAVEYDDGSDEKFLRRLW
Ga0116215_14210192	3300009672	Peatlands Soil	AAGEAPGRGTEARVGGFYWERHPDGPFATLIAVAATYCTPEAYDGAYDDLISRARAPEPDDEEIRAFKAELQQALADPGQLPGDQLFHAVDYGDGSNEAFLRRL*
Ga0074046_100292782	3300010339	Bog Forest Soil	VSGFYWERHPDGPFATLIGVAATYCSPDADAEDYERLKRLAGHEDDQRMRVFKAELRQALANPDQLPLGELDNAVEFHDESEETFLRRLWRDLYGDEPI*
Ga0074044_102931982	3300010343	Bog Forest Soil	VTGFYWERHPDGPFATLIGVASTYCSPDADAEDYERLKRLARHEDDRRMRVFKAELRQALANPGQLPMGELDNAVEYNDESEETFLR
Ga0134128_103963711	3300010373	Terrestrial Soil	VTGFYWERHPDGPFATLIAATATYCSPDADDYQRLKRLAGREDDQRMQVFKDELRQALASPGELPKGELEKAVEFTDEN
Ga0134128_121091581	3300010373	Terrestrial Soil	LIAVTATYCSPDADADDYQRLKRLAGREDDQRMQVFKDELRQALASPGELPKGELEKAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0136449_1003657334	3300010379	Peatlands Soil	VTGYYWERHPDGPFATLIGVAATYCSPDADAEDYERLKRLARHEDDRRMRVFKAELRQALANPGQLPKGELDNAVEYNDESEETFLRRLWRDLYGGEPI*
Ga0136449_1038266502	3300010379	Peatlands Soil	VTGFYWERHPDGPFATLIGVAATYCSPDADAQDYERLKRLARHEDDQRMRVFKAELRRALADPGQLPPGELDNAVEYNDES
Ga0134124_124540422	3300010397	Terrestrial Soil	VTGFYWERHPDGPFATLIAVTATYCSPDADADDYQRLKRLAGREDDQRMQVFKDELRQALASPGELPKGELEKAVEFTDENEAAFL
Ga0126344_13794092	3300010866	Boreal Forest Soil	VRRFAVSAFYWERYPDGPFATLIAVATTYCGPDAYDGAYQDLVRRARAADADDDEMRVFKAELRQALADTGALPDEELSEAVEYDDGSDERFLRRVWRDLYGDEPVGGA*
Ga0126344_14065372	3300010866	Boreal Forest Soil	VTGFYWERHPDGPFATLIAVATTYCSPDSDPEDYERLKRRAKREDNEEMRVFKAELRQAITHPGQLPGDELFRHVQYDDGSDEKFLRRLWRDLYGDEPVTATGQASTP*
Ga0126361_103158881	3300010876	Boreal Forest Soil	VGRFAVSAFYWERHPDGPFATLIAVATTYCGPDAYDGAYQDLVRRARTADADDDEMRVFKAELRQALADTGALPDEELSEAVEYDDGSDERFLRRVWRDLYGDEPVGGA*
Ga0126361_103929552	3300010876	Boreal Forest Soil	VVSVFYWERHPDGPFATLIGVAATYCGPDAYDGAYQDLVRRARAADAADDEMRVFKAELRQALADPAALPDEELSEAVEYDDGSDERFLRRVWRDLYGDEAVASA*
Ga0153922_10434022	3300012181	Attine Ant Fungus Gardens	VVSAFYWERHPDGPFVTLITMAATYCSPDAYDGAYEDLVSRARSPRPDDDEMRIFKAELQQALADPSKLPEGELDDAVEYNDGSDERFLRRLWRDLYGDEAPAS*
Ga0137378_103506352	3300012210	Vadose Zone Soil	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYERLKRLAGREDDRRMRVFKEELRQALADPIQLPEGELDNAVEFTDENEAAFLRRLWRDLYGDEPT*
Ga0157370_110555621	3300013104	Corn Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0157378_107810161	3300013297	Miscanthus Rhizosphere	VTGFYWERNPDGPFATLIAVAATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0181531_101985471	3300014169	Bog	LTGFYWERHPDGLFATLIGVAATYSSPDAGADDYERLKRLSKREDDQQMRVFKAELRQALADPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDEPLAGP*
Ga0181531_102230462	3300014169	Bog	VSTFYWERHPDGPFVTLIAVAATYCSPDAYDGAYDDLARRARAADSDDEEMRVFKAELRQALADPSALPDEELSEAVEYSDGSDERFLRRLWRDLYGDEPTAGA*
Ga0181525_100296261	3300014654	Bog	VSTFYWERHPDGPFVTLVAVAATYCSPDAYDGAYDDLARRARAADSDDEEMRVFKAELRQALADPSALPDDELSEAVEYSDGSDERFLRRLWRDLYGDEPAAGA*
Ga0182030_101092274	3300014838	Bog	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYEDLVSRARSPQTADDEMRIFKAELREALADPGQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGNEPIAGPT*
Ga0182030_112594301	3300014838	Bog	DGRFATLIAVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWRDLYGDEPIAGS*
Ga0157379_115494192	3300014968	Switchgrass Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALASPGELPKGELEKAVEFTDENEAAFLRRLWRDLYDDEPA*
Ga0187809_100539352	3300017937	Freshwater Sediment	MSPWYWERHPDGPFATLIRVATTYCSPDADEDAYAGLKRLAKRENVEEMRVFKDELREALRDPTRLPDDELSESVEYDDGSTEAFLRRLWHDLYGDEPIDMPS
Ga0187847_102652112	3300017948	Peatland	VSAFYWERHPDGPFTTLIAVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPGQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDEPVTSS
Ga0187782_103309332	3300017975	Tropical Peatland	MTGFYWERHPDGPFTTLIRVAATYCSPDADAEDYQRLKRLAGLEGDRQMAVFKAELRQALADPDQLPAGELDDAVEYREEGDQEFLRRLWRDLYGDEPVAE
Ga0187805_102708682	3300018007	Freshwater Sediment	MSPLYWERHPDGPFATLIRVATTYCSPDADEDAYAGLKRLAKRENVEEMRVFKDELREALRDPTRLPDDELSESVEYDDGSTEAFLRRLWHDLYGDEPIDMPSGHAT
Ga0187859_108977981	3300018047	Peatland	VNAFYWERHPDGPFATLIGVSATYCSPDAYDGACEDLVSRARSPRADDDEMRVFRAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLW
Ga0210403_109908232	3300020580	Soil	IAVAATYCSPDADAEDYQRLKRLAGREDDQRMRVFKQELRQALADPGQLPEGELDNAVEFTDEDEAAFLRRLWRDLYGDELT
Ga0210395_100259231	3300020582	Soil	SAFYWERHPDGPFATLIAVAATYCSPDAYDGAYEDLVSRARSTEASDDEIRVFKAELRQAMAHPSELPGHELSDAVEYDDGSTEGFLRRLWRDLYGDDV
Ga0210388_103927083	3300021181	Soil	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYEDLVSRARSTEASDDEIRVFKAELRQAMAHPSELPGHELSDAVEYDDGSTEGFLRRLWRDLYGDDV
Ga0210388_106686652	3300021181	Soil	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEIRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDEPIAGS
Ga0210385_108574202	3300021402	Soil	VGVFYWERHPAGPFATLISVAATYCGPDAYDGAYDDLINRARAPEPDDEEIGAFKAELQQALADPAQLPGDELSHAVEYGDGTDEAFLRRLWHDLYGDRPDTEA
Ga0210385_110826171	3300021402	Soil	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNEQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRGLWRDLYGDEPIASS
Ga0210383_107315501	3300021407	Soil	VSAFYWERHPDGPFATLIAVASTYCSPDAYDGAYEDLVSRARSPEASDDEIRVFKAELRQAMAHPSELPGHELSDAVEYDDGSTEGFLRRLWRDLYGDDG
Ga0210391_104885082	3300021433	Soil	VSTFYWERHPEGPFATLIAVAASYCSPDAYDGAYDDLVRRARSAEADDDEMRVFKAELRQALADPSRLPRGELSAAVEYDDGSDEKFLHRLWHDLYGDESVS
Ga0210390_100206147	3300021474	Soil	VSAFYWERHPDGPFVTLIAVAATYCSPDAYDGAYEDLVHRARSPEGEDDEMRVFKAELRRGLADPSQLPSNELSEAVEYDDGSDERFLRRLWRDLYGEEPIGRA
Ga0187846_100954061	3300021476	Biofilm	MNGFYWERHPEGPFATLIGVAATYCSPDADAEDYQRLKRLARTEDDPRMVTFKGELRQALADPGQLPEGELEDAVEYSEQNDEDFLRRLWHDLYGDEPEPDRTG
Ga0207692_108717721	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VTGFYWERHPDGPFATLIAVTATYCSPDADADDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYNDEPT
Ga0207684_101318224	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSAFYWQRHPNGPFATLIGVAATYCGPDAYDGAYQDLVRRARAAEADDDEMRVFKAELRQALADPAALPDEELSEAVEYNDGSDERFLRRVWRDLYGDEPVAGA
Ga0207700_104913912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTGFYWERHPDGPFATLIAVAATYCSPDADAEDYQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYNDEPT
Ga0207702_114538241	3300026078	Corn Rhizosphere	VTGFYWERHPDGPFATLIAVAATYCSPDADAEDHQRLKRLAGREDDQRMRVFKEELRQALGSPDELPKGELENAVEFTDENEAAFLRRLWRDLYDDEPA
Ga0209838_10031372	3300026214	Soil	VSAFYWERHPDGPFTTLIGVTATYCSPDAYGGAYEDLVSRARSPQADDDEIRVFKAELRRALADPSQLPAGELDDAVEYDDGSDENFLRRLWRDLYGDEPIARS
Ga0208608_1149152	3300027165	Forest Soil	LIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDRSDEKFLRRLWHDLYGDEPIAGS
Ga0209420_11451872	3300027648	Forest Soil	VTGFYWERHPDGPLATLIAVAATYCSPDADADDYNRLKRLVKREDNEQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDESIN
Ga0209580_103939401	3300027842	Surface Soil	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYGDLVRRARSPEPDDDEIRVFKDELRRGLASPAELPHDELSDAVEYDDGSDERFLRRLWRDLYGDEAV
Ga0209166_104884702	3300027857	Surface Soil	VSAFYWERHPDGPFATLIGVAATYCGPDAYDGAYRDLVRRARAADASDDEMRTFKAELQQALADPGALPDEELSEAVEYDDGSDERFLRRVWRDLYGDEPVAGA
Ga0209169_105005192	3300027879	Soil	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNEQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDEPIAGS
Ga0209275_108209742	3300027884	Soil	VSAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEIRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRGLWHDLYGDEPIAGS
Ga0302220_100213192	3300028742	Palsa	VSAFYWERHPDGPFSTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPMAGS
Ga0302220_103113542	3300028742	Palsa	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNRQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWRDLYGDEPIAGS
Ga0302220_103625961	3300028742	Palsa	IGVTATYCSPDAYDGAYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGRDEKFLRRLWHDLYGDEPIAGS
Ga0302234_101115192	3300028773	Palsa	VTGFYWERYPDGLFATLIGVAATYCSPDADADDYDRLKRLAKREDNQQMRVFKAELRRALADPSQLPAGELDEAVEYDDGSDEKFLRRLWHDL
Ga0302225_100205075	3300028780	Palsa	VTGFYWERYPDGLFATLIGVAATYCSPDADADDYDRLKRLAKREDNQQMRVFKAELRRALADPSQLPAGELDEAVEYDDGSDEKFLRRLWHDLYGNEPIAGS
Ga0302232_100072654	3300028789	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPMAGS
Ga0302232_105096401	3300028789	Palsa	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGRDEKFLRRLWHDLYGDEPIAGS
Ga0302232_106932721	3300028789	Palsa	VSAFYWERHPDGPFTTLIAVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRR
Ga0302229_102005722	3300028879	Palsa	PSGPFATLIAVAATYCSPDADADDYDRLKRLVKREDNEQMQVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHNLYGDEPIAGS
Ga0302229_102312031	3300028879	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRL
Ga0308309_115880401	3300028906	Soil	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYGDLVRRARSPEPDDDEIRVFKDELRRGLASPAELPHDELSDAVEYDDGSDERFLRRLWRDLYG
Ga0311368_100469871	3300029882	Palsa	VTGFYWERYPDGLFATLIGVAATYCSPDADADDYDRLKRLAKREDNQQMRVFKAELRRALADPSQLPAGELDEAVEYDDGSDEKFI
Ga0311368_111526181	3300029882	Palsa	TGFYWEQHPDGPFATLVAVAATYCSPDADADDYERLKRLAKREGDEQMHIFKAELLRALADPSQLPEGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311369_111363741	3300029910	Palsa	VTGFYWERYPDGLFATLIGVAATYCSPDADADDYDRLKRLAKREDNQQMRVFKAELRRALADPSQLPAGELDEAVEYDDGSDEKFLRRLWRDLYGDEPIAGS
Ga0311340_101088572	3300029943	Palsa	VSAFYWERHPDGPFTTLIAVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311340_101528311	3300029943	Palsa	VNAFYWERHPDGPFATLVGVTATYCSPDAYDGVYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGNEPITSP
Ga0311340_102510784	3300029943	Palsa	VTGFYWEQHPDGPFATLVAVAATYCSPDADADDYERLKRLAKREGDEQMHIFKAELLRALADPSQLPEGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311340_103427292	3300029943	Palsa	VSAFYWERHPDGPFTTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPGQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPVAGP
Ga0311340_107397292	3300029943	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRR
Ga0311340_108837321	3300029943	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLTKREDHQQMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDE
Ga0311339_102060842	3300029999	Palsa	VTGFYWERHPDGRFATLIAVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSQLPEGELDDAVEYDDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311339_105297722	3300029999	Palsa	VTGFYWERHPDGSFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPGELPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGQ
Ga0311339_105493391	3300029999	Palsa	FATLVAVAATYCSPDADADDYERLKRLAKREGDEQMHIFKAELLRALADPSQLPEGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311339_106827381	3300029999	Palsa	VSAFYWERHPDGPFSTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRL
Ga0311339_110606172	3300029999	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLTKREDHQQMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311338_103015961	3300030007	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDSDADDYERLKRLTKREDDQQMRVFKAELRRALADPGQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPVAGP
Ga0302178_103798041	3300030013	Palsa	ATLIGVAATYCSPDSDADDYERLKRLTKREDDQQMRVFKAELRRALADPGQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPVAGP
Ga0302176_101437062	3300030057	Palsa	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNRQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWRDLYGDEPIA
Ga0302179_103646202	3300030058	Palsa	VSAFYWERHPDGPFSTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAEIRRALADPSLLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPMAGS
Ga0311372_115653431	3300030520	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDE
Ga0311357_100520325	3300030524	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLAKREDDQQMRVFKAELRRALADPSLLPAGELDDAVEYNDGSD
Ga0311355_101659271	3300030580	Palsa	VNAFYWERHPDGPFATLIGVTATYCSPDAYDEAYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGRDEKFLRRLWHDLYGDEPIAGS
Ga0311355_116541071	3300030580	Palsa	PFATLIGVAATYCSPDADADDYERLKRLTKREDHQQMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPIAGS
Ga0311356_105949591	3300030617	Palsa	IGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPGQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPVAGP
Ga0265460_125327132	3300030740	Soil	GRFAVSAFYWERHPDGPFVTLIAVAATYCSPDAYHEAYDDLVRRARAADADDEEMRVFKAELRQALADPSALPDDELSEAVEYDDGSDEGFLRRLWRDLYGDEPTAGA
Ga0302308_108261771	3300031027	Palsa	VNAFYWERHPDGPFATLIGVTATYCSPDAYDEAYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGRDEKF
Ga0302307_100434243	3300031233	Palsa	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPSLLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPMAGS
Ga0302325_101306826	3300031234	Palsa	VTGFYWERHPDGPFATLIGVAATYCSPDADADDYERLKRLTKREDHQQMRVFKAELRRALADPSQLPAGELDDAVEYNDGSDEKFLRRL
Ga0302326_101799586	3300031525	Palsa	DEPFTTLIGVTATYCSPDAYDGAYEDLVSRARSPQADDDEMRVFKAELRRALADPGQLPAGELDDAVEYNDGSDEKFLRRLWHDLYGDEPVAGP
Ga0302326_103321815	3300031525	Palsa	VNAFYWERHPDGPFATLVGVTATYCSPDAYDGVYEDLVSRARSPRADDDEMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGNEPI
Ga0302326_113122462	3300031525	Palsa	VTGFYWERHPDGPFATLIAVAATYCSPDADADDYDRLKRLAKREDNQQMRVFKAELRQALADPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGNEPITGP
Ga0310686_1000482686	3300031708	Soil	VNAFYWERHPDGPFATLIGVTATYCSPDAYDGAYEDLVSRARSPRADDDEIRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGAASIAGS
Ga0310686_1002896014	3300031708	Soil	VSAFYWERHPDGPFATLIAVAATYCSPDVYDGAYEDLVRRARSPEPDDGEIRVFKDELRRALADPGALPDDELSAAVEYDDGSDERFLGRLWRDLYGDEAV
Ga0310686_1022597422	3300031708	Soil	MSPLYWERHPDGPFATLIRIATTYCSPDADEDAYAGLKRLAKRENVEEMRVFKDELREALRDPTRLPDDELSESVEYDDGSTEAFLRRLWHDLYGDEPIDMPSGHA
Ga0310686_1100959681	3300031708	Soil	VSAFYWERHPDGPFATLIAVAATYCGPDAYDGAYQDLVRRAREADADDDEMRVFKAELRQALADPAALPDEELSEAVEYDDGSDERFLRRVWRDLYGEEPVANA
Ga0310686_1116152961	3300031708	Soil	MSAFYWERHPDGPFVTLVAVATTYCSPDAYDGAYEDLVSRARSPEPDDEEMCVFKAELRQGLTDPSQLPHDELSESVQYDDGSDEKFLRRL
Ga0310686_1143413982	3300031708	Soil	VTGFYWERHPDGPFATLIAVAATYCSPDADVDDYDRLKRLAKREDNEQMRVFKAELRQALTDPSQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGDASIVGS
Ga0310686_1144502092	3300031708	Soil	VSAFYWERHPDGPFVTLIAVAATYCSPDAYDGAYEDLVHRARSPEGEDDEMRVFKAELRRGLADPSQLPGNELSEAVEYDDGSDERFLRRLWRDLYGEEPIGRA
Ga0318552_103479081	3300031782	Soil	VSAFYWERHPEGPFATLIAVAATYCSPDTYDGAYEDLVHRAGVSDADDEEMRIFKAELRRALADPGALPDDELSAAVEYDDGSDERFLRRLWRDLY
Ga0318565_105063511	3300031799	Soil	VSAFYWERHPEGPFATLIAVAATYCSPDTYDGAYEDLVHRAGVSDADDEEMRIFKAELRRALADPGALPDDELSAAVEYGDGSDERFLRRLWRD
Ga0311301_103056672	3300032160	Peatlands Soil	VTGYYWERHPDGPFATLIGVAATYCSPDADAEDYERLKRLARHEDDRRMRVFKAELRQALANPGQLPKGELDNAVEYNDESEETFLRRLWRDLYGDEPI
Ga0311301_115382821	3300032160	Peatlands Soil	MGVFYWERHPDGPFVTLIAVAATYCSPDACDGDYDDLISRARAPDADDEEIRTFTAELRQALADPGQLPGDELSAAVEYSDGSDEVFLLRLWHDLYGEQPSTRP
Ga0335085_105098511	3300032770	Soil	MSPLYWERHPDGPFATLIRVATTYCSPDADEDAYAGLKRLAKRENVEEMRVFKDELREALRDPTRLPDDELSKSVEYDDGSTEAFLRRLWHDLYGDEPIDMPSGHAT
Ga0335074_100479957	3300032895	Soil	MSPLYWERHPEGPFATLIRVAATYCSPDADEEAYEGLQRLAKREDYEDMQVFKAELREALRDPSQLPDGELSESVQYDDGSTEAFLRRLWRDLYGDEPFDTPRDQ
Ga0334804_019860_1046_1363	3300033818	Soil	VSAFYWERHPDGPFATLIAVAATYCSPDAYDGAYEDLVSRARSPQTADDEMRIFKAELREALADPGQLPAGELDDAVEYDDGSDEKFLRRLWHDLYGNEPIAGPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences