Metagenome / Metatranscriptome Family F066944

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066944
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	45 residues
Representative Sequence	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTEDAA
Number of Associated Samples	112
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.60 %
% of genes near scaffold ends (potentially truncated)	99.21 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (24.603 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.58% β-sheet: 0.00% Coil/Unstructured: 70.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF08327	AHSA1	7.94
PF08281	Sigma70_r4_2	6.35
PF08669	GCV_T_C	5.56
PF00296	Bac_luciferase	4.76
PF13302	Acetyltransf_3	3.97
PF01494	FAD_binding_3	3.97
PF01638	HxlR	3.97
PF02423	OCD_Mu_crystall	3.17
PF01039	Carboxyl_trans	3.17
PF00440	TetR_N	2.38
PF13560	HTH_31	1.59
PF07690	MFS_1	1.59
PF00753	Lactamase_B	1.59
PF00580	UvrD-helicase	1.59
PF01740	STAS	1.59
PF00903	Glyoxalase	1.59
PF00583	Acetyltransf_1	1.59
PF00924	MS_channel	0.79
PF01474	DAHP_synth_2	0.79
PF00920	ILVD_EDD	0.79
PF12840	HTH_20	0.79
PF01872	RibD_C	0.79
PF02153	PDH_N	0.79
PF00082	Peptidase_S8	0.79
PF01061	ABC2_membrane	0.79
PF06035	Peptidase_C93	0.79
PF00378	ECH_1	0.79
PF00392	GntR	0.79
PF13466	STAS_2	0.79
PF02055	Glyco_hydro_30	0.79
PF04542	Sigma70_r2	0.79
PF03055	RPE65	0.79
PF02775	TPP_enzyme_C	0.79
PF12680	SnoaL_2	0.79
PF03795	YCII	0.79
PF04993	TfoX_N	0.79
PF13561	adh_short_C2	0.79
PF06441	EHN	0.79
PF00582	Usp	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	7.94
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	4.76
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.97
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.97
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.97
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.97
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	3.17
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	3.17
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	3.17
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	3.17
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	1.59
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	1.59
COG3973	DNA helicase IV	Replication, recombination and repair [L]	1.59
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.59
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.79
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.79
COG3200	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II	Amino acid transport and metabolism [E]	0.79
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.79
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.79
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.79
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.79
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.79
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.79
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.79
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.03 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.86 %
Unclassified	root	N/A	33.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.75 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.76 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.59 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.59 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.76 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.59 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.79 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.79 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	3.17 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.79 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.79 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.79 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.79 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.79 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.79 %
unclassified Pseudonocardiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Actinocatenispora rupis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora rupis	3.17 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.79 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.79 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	0.79 %
Rhodococcus oxybenzonivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oxybenzonivorans	0.79 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.79 %
Actinomadura oligospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	0.79 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.79 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402HOOKL	Not Available	515	Open in IMG/M
3300001418\|JGI20188J14859_1006487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1545	Open in IMG/M
3300002917\|JGI25616J43925_10207970	Not Available	752	Open in IMG/M
3300003219\|JGI26341J46601_10073321	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005181\|Ga0066678_10651556	Not Available	701	Open in IMG/M
3300005332\|Ga0066388_101242083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1278	Open in IMG/M
3300005467\|Ga0070706_101125313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	722	Open in IMG/M
3300005537\|Ga0070730_10708457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300005537\|Ga0070730_11055516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	505	Open in IMG/M
3300005610\|Ga0070763_10036125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2287	Open in IMG/M
3300005764\|Ga0066903_107230200	Not Available	574	Open in IMG/M
3300005921\|Ga0070766_11078361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora rupis	554	Open in IMG/M
3300006028\|Ga0070717_10691420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	927	Open in IMG/M
3300006176\|Ga0070765_100935254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300006176\|Ga0070765_101926506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300009162\|Ga0075423_12106854	Not Available	612	Open in IMG/M
3300009520\|Ga0116214_1008261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3705	Open in IMG/M
3300009525\|Ga0116220_10138116	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300009552\|Ga0116138_1127107	Not Available	704	Open in IMG/M
3300010043\|Ga0126380_11716540	Not Available	565	Open in IMG/M
3300010047\|Ga0126382_10038616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2693	Open in IMG/M
3300010154\|Ga0127503_10512389	Not Available	939	Open in IMG/M
3300010341\|Ga0074045_10144778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1618	Open in IMG/M
3300010359\|Ga0126376_10211461	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300010361\|Ga0126378_10767857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1074	Open in IMG/M
3300010366\|Ga0126379_12394230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300010376\|Ga0126381_100087948	All Organisms → cellular organisms → Bacteria	3932	Open in IMG/M
3300010396\|Ga0134126_13056685	Not Available	505	Open in IMG/M
3300010397\|Ga0134124_11224865	All Organisms → cellular organisms → Bacteria → Terrabacteria group	771	Open in IMG/M
3300011404\|Ga0153951_1065355	Not Available	650	Open in IMG/M
3300012948\|Ga0126375_10159746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1432	Open in IMG/M
3300014165\|Ga0181523_10236024	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300014165\|Ga0181523_10552266	Not Available	634	Open in IMG/M
3300014200\|Ga0181526_10213342	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300014200\|Ga0181526_10770334	Not Available	606	Open in IMG/M
3300014501\|Ga0182024_11518270	Not Available	764	Open in IMG/M
3300014655\|Ga0181516_10638314	Not Available	550	Open in IMG/M
3300016404\|Ga0182037_11542227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300016445\|Ga0182038_10142970	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300017823\|Ga0187818_10227599	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300017926\|Ga0187807_1153362	Not Available	737	Open in IMG/M
3300017932\|Ga0187814_10249188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	673	Open in IMG/M
3300017938\|Ga0187854_10205363	Not Available	869	Open in IMG/M
3300017946\|Ga0187879_10153868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1300	Open in IMG/M
3300017970\|Ga0187783_10154376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	1691	Open in IMG/M
3300017972\|Ga0187781_11344104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora rupis	528	Open in IMG/M
3300018025\|Ga0187885_10403727	Not Available	612	Open in IMG/M
3300018037\|Ga0187883_10397185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300018043\|Ga0187887_10295803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300020583\|Ga0210401_10737345	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300021170\|Ga0210400_11420172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora rupis	553	Open in IMG/M
3300021401\|Ga0210393_11462851	Not Available	544	Open in IMG/M
3300021402\|Ga0210385_10843783	Not Available	703	Open in IMG/M
3300021402\|Ga0210385_10962227	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300021402\|Ga0210385_11146552	All Organisms → cellular organisms → Bacteria → Terrabacteria group	597	Open in IMG/M
3300021403\|Ga0210397_11373446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora → Actinocatenispora rupis	549	Open in IMG/M
3300021406\|Ga0210386_11446991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300021407\|Ga0210383_11002576	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300021432\|Ga0210384_10392655	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300021474\|Ga0210390_10920863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	718	Open in IMG/M
3300021474\|Ga0210390_11118483	Not Available	639	Open in IMG/M
3300021475\|Ga0210392_10004776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7018	Open in IMG/M
3300021477\|Ga0210398_11058234	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300021478\|Ga0210402_10232383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300021560\|Ga0126371_13371246	Not Available	540	Open in IMG/M
3300021560\|Ga0126371_13631426	Not Available	520	Open in IMG/M
3300025910\|Ga0207684_10213991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1662	Open in IMG/M
3300025910\|Ga0207684_10465621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1085	Open in IMG/M
3300026551\|Ga0209648_10355549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1003	Open in IMG/M
3300026551\|Ga0209648_10805296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oxybenzonivorans	513	Open in IMG/M
3300027590\|Ga0209116_1036154	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300027619\|Ga0209330_1145118	Not Available	535	Open in IMG/M
3300027855\|Ga0209693_10007936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4910	Open in IMG/M
3300027855\|Ga0209693_10070064	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300027869\|Ga0209579_10361342	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300027874\|Ga0209465_10539257	Not Available	581	Open in IMG/M
3300027879\|Ga0209169_10461575	All Organisms → cellular organisms → Bacteria → Terrabacteria group	667	Open in IMG/M
3300028015\|Ga0265353_1035774	Not Available	503	Open in IMG/M
3300028742\|Ga0302220_10070272	Not Available	1421	Open in IMG/M
3300028773\|Ga0302234_10022549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2991	Open in IMG/M
3300028775\|Ga0302231_10377352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300028781\|Ga0302223_10284892	Not Available	546	Open in IMG/M
3300028813\|Ga0302157_10578453	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300028863\|Ga0302218_10301962	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300028882\|Ga0302154_10334493	Not Available	738	Open in IMG/M
3300029910\|Ga0311369_11445629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300029944\|Ga0311352_10311717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1308	Open in IMG/M
3300029954\|Ga0311331_11414228	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300029999\|Ga0311339_11579288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300030043\|Ga0302306_10041282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1842	Open in IMG/M
3300030056\|Ga0302181_10042103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2457	Open in IMG/M
3300030057\|Ga0302176_10057050	Not Available	1500	Open in IMG/M
3300030399\|Ga0311353_10094340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2923	Open in IMG/M
3300030490\|Ga0302184_10254670	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300030617\|Ga0311356_10832944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300030730\|Ga0307482_1239368	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300030740\|Ga0265460_10659829	Not Available	874	Open in IMG/M
3300031028\|Ga0302180_10557792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300031233\|Ga0302307_10131644	Not Available	1301	Open in IMG/M
3300031234\|Ga0302325_11801380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300031679\|Ga0318561_10702232	Not Available	556	Open in IMG/M
3300031681\|Ga0318572_10326972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300031682\|Ga0318560_10789015	Not Available	513	Open in IMG/M
3300031708\|Ga0310686_105216112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300031715\|Ga0307476_10505558	Not Available	895	Open in IMG/M
3300031715\|Ga0307476_11156261	Not Available	567	Open in IMG/M
3300031719\|Ga0306917_10265286	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300031764\|Ga0318535_10133432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300031769\|Ga0318526_10474478	Not Available	511	Open in IMG/M
3300031771\|Ga0318546_10815746	Not Available	657	Open in IMG/M
3300031821\|Ga0318567_10251019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	994	Open in IMG/M
3300031835\|Ga0318517_10024626	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300031860\|Ga0318495_10266625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300031890\|Ga0306925_10687748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300031897\|Ga0318520_10308472	Not Available	954	Open in IMG/M
3300031910\|Ga0306923_11385667	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300032008\|Ga0318562_10553924	Not Available	665	Open in IMG/M
3300032009\|Ga0318563_10769155	Not Available	516	Open in IMG/M
3300032261\|Ga0306920_100857115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1331	Open in IMG/M
3300032892\|Ga0335081_10116756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3914	Open in IMG/M
3300032892\|Ga0335081_10767373	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300032895\|Ga0335074_10327017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1727	Open in IMG/M
3300032895\|Ga0335074_10345229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1660	Open in IMG/M
3300032896\|Ga0335075_11253205	Not Available	638	Open in IMG/M
3300032955\|Ga0335076_10867005	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.41%
Host-Associated	Host-Associated	1.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	12.70%
Plants	Host-Associated → Plants	0.79%
Fungi	Host-Associated → Fungi	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.84%
Peat	Environmental → Terrestrial → Peat	15.87%
Freshwater	Environmental → Aquatic → Freshwater	12.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%
Mycelium	Host-Associated → Fungi → Mycelium	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.87%
Loam	Environmental → Terrestrial → Soil → Loam	12.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.38%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.38%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.59%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_10141480	2070309009	Soil	VSAPGITFQLLVGQQAAEHAGELQELHAEVYAEPPFR
JGI20188J14859_10064874	3300001418	Arctic Peat Soil	VSTPDLTFQVLDGAAAAAHADELQALYADVFADPPQRRDEEAARFA
JGI25616J43925_102079702	3300002917	Grasslands Soil	MTTPDMTFQLIDGLQAAEHATDLQALHAEVYADLPQQRDDNAALFADSFRVQRR
JGI26341J46601_100733212	3300003219	Bog Forest Soil	VPVSAPGITFQLLDGPQAAAHADELQVLHAEVYADPPYGRTDDAAVFADRF
Ga0066678_106515561	3300005181	Soil	MPAPEITFQLLEGTHAAERADELQALHAEVYADPPYGQKDDAAL
Ga0066388_1012420833	3300005332	Tropical Forest Soil	VPAPEITFRLLDGRQAAEHAAELQALHAEVYADPPYQREDDAGFADRFRV
Ga0070706_1011253131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPAPEMTFQLLDGRQAAEHAAELQALHAEVYAGPPYQREDD
Ga0070730_107084572	3300005537	Surface Soil	VSVPGITFLLLDGSGAGADADEIRALHAEVYADPPYQCG
Ga0070730_110555161	3300005537	Surface Soil	MARVRAAEVAFRLLGGEQATEHADELRALHAEVYADPPYRWRDEQ
Ga0070763_100361251	3300005610	Soil	VSAPDITFELLDGRQAAAHADELQVLHAEVYADPPYGRTDDAAV
Ga0066903_1072302001	3300005764	Tropical Forest Soil	VSAPGVTFQLLVGQQAAGHAGELQELHAEVYAEPPYRR
Ga0070766_110783612	3300005921	Soil	VAAPAPEITFQLLDGTQAAGHEAELQALHAEVYAALPYRRPDDAGLFADRFRVQSRQP
Ga0070717_106914203	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VPTSDMTFQLLDGQQAAAHAAELQALHAEVYADPPYRR
Ga0070765_1009352541	3300006176	Soil	VPAPEITFQLLDGTQAAGHEAELQALHAEVYADPPYRRTDDDGQYARRFRVQRRQP
Ga0070765_1019265061	3300006176	Soil	VVVSAPDITFQLLDGPQAAAHADELQVLHAEVYADPPYGRTDDAAVFA
Ga0075423_121068542	3300009162	Populus Rhizosphere	VALSAPGITFLLLGGQQAAEHARELQELHAEVYAEPPYRRDD
Ga0116214_10082615	3300009520	Peatlands Soil	VIVSAPGITFGLLDGPQAAAHADELQVLHAEVYADPPYLRADDAAVF
Ga0116220_101381161	3300009525	Peatlands Soil	VVVSAPGITFGLLDGPQAAAHADELQVLHAEVYADPPYLRADDAAVF
Ga0116138_11271072	3300009552	Peatland	MTFQLLDGTKAAADADELRALHAEVYADPPYRRTEDAALFADRFRVQR
Ga0126380_117165401	3300010043	Tropical Forest Soil	VAVSAPGIEFQLLGGKQAAEHAAELLALHAEVYAEPPYRRDEDGEQ
Ga0126382_100386163	3300010047	Tropical Forest Soil	VAAPGVTLQLLGGKQAAEHAGELQDLHAEVYAEPPYRRDDD
Ga0126373_101987361	3300010048	Tropical Forest Soil	VIVTTPGVSYRLLDGAQAAGHADELQSLHAEVYAEPPYDRGD
Ga0127503_105123892	3300010154	Soil	VSAPGITLQLLGGQQAAEHAGELQQLHAEVYAEPPYRRDD
Ga0074045_101447781	3300010341	Bog Forest Soil	VSAPGITFQLLDGPQAAAHADELQVLHAEVYADPPYGRTDDAAV
Ga0126376_102114614	3300010359	Tropical Forest Soil	VAVSAPGIEFQLLGGKQAAEHAAELLALHAEVYAEPPYRRDEDGE
Ga0126378_107678571	3300010361	Tropical Forest Soil	VSDLTFQLLDGAAAASHVTELQALHAEVYAAPPYGRDEDTATFADRFRVQRR
Ga0126379_123942301	3300010366	Tropical Forest Soil	VPAPEITFQLLDGQQAAVRAAELQALHAEVYADPPYRREDDAGF
Ga0126381_1000879481	3300010376	Tropical Forest Soil	MTFLLLDGQEAARHADDFAAMAAEVYADPPYGWGDQE
Ga0134126_130566851	3300010396	Terrestrial Soil	VPAPEITLELLARPEAARDAAELQALAAEVYAAPPYSRDEQDAGQFARRL
Ga0134124_112248652	3300010397	Terrestrial Soil	VPAPEITFGLLSGRQAAAHADELEALHAEVYRDPPYRRDADPPGFASRFTVQSRQPGFTL
Ga0153951_10653552	3300011404	Attine Ant Fungus Gardens	VAVPAPEITFQLLDGTQAAEHEGELQALHAEVYADPPYRRTGDDAGEYARRFRVQRR
Ga0126375_101597463	3300012948	Tropical Forest Soil	VAAPGVTLQLLGGKQAAEHAGELQDLHAEVYAEPPYRRDDDA
Ga0181523_102360241	3300014165	Bog	MTFQLLDGTQAAADADELRALHAELYADPPYRQQDDAALFADRFRVQRRQPG
Ga0181523_105522661	3300014165	Bog	MTFQLLDGTRAAAHADEVQALHAAVYADPPYRQQDDAALFADRFR
Ga0181526_102133422	3300014200	Bog	MTFHLLDGTQAAAHADELQALHAAVYADPPYRQQDDAALFADRFRVQRRQ
Ga0181526_107703342	3300014200	Bog	MTFQLLDGTRAAAHADELQALHAAVYADPPYRQQDDAALFADRFRVQRRQ
Ga0182024_115182701	3300014501	Permafrost	VSTPDITFQVLDGSAAGEHADELQSLHAEVYAGPPYGRGEGAALFAD
Ga0181516_106383141	3300014655	Bog	VVVPATEMTFQLLDGAHAAEHAAELEALHADVYAGDDAGRFARRFRVQQRQP
Ga0182037_115422271	3300016404	Soil	VSVPGITFQLLSGQQAAAHAAELQDLHAEVYAEPPYR
Ga0182038_101429701	3300016445	Soil	MRTDHEIEEVAVSVPGIAFGLLGGEQAAEHAGELLALHAEVYAEAPYR
Ga0187818_102275992	3300017823	Freshwater Sediment	VSAPGITFGLLDGTQAAAHADELQVLHAEVYADPPYLR
Ga0187807_11533622	3300017926	Freshwater Sediment	MIVSTSGIAFQVLDGAQAAAHADGLLALHAEVYAEPPYGLD
Ga0187814_102491881	3300017932	Freshwater Sediment	VIVTTPGMTYRLLDSTQAAAHADELQALHAEVYAEPPYGRADDAARLAGQLRVQRRQP
Ga0187854_102053632	3300017938	Peatland	VVVVPTSEMTFQLLDGTQAAAHADELQALHAEVYADPPYRQQDDAALFA
Ga0187879_101538681	3300017946	Peatland	VPAAGIALKLLDGRQAAAHAAELQDLHAEVYADPPYQGLPDSPPFAERFRVQRRQPG
Ga0187783_101543764	3300017970	Tropical Peatland	VPAPEITFELLDGTQAAAHAAELEALHAEIYADPPY
Ga0187781_113441041	3300017972	Tropical Peatland	VPAPDITFQLLDAAQAAGHEPELQALHAEVYADQPYRLAADAGEFFRRLRVQRRQPGFV
Ga0187885_104037272	3300018025	Peatland	VVVVPTSEMTFQLLDGTQAAAHADELQALHAEVYADPPYRQQDDAALFADRFRVQRR
Ga0187883_103971852	3300018037	Peatland	VPAAGIALKLLDGRQAAAHAAELQDLHAEVYADPPYQGLPDSPPFA
Ga0187887_102958031	3300018043	Peatland	MVSSPGIAFQLLDGTEAAAHADELQALHAEVYADPPYGRTEDAA
Ga0210401_107373451	3300020583	Soil	VSAPGITFQLLDGPQAAAHADELQVLHAEVYADPPYGRTDDAAVFADR
Ga0210400_114201722	3300021170	Soil	VAVPAPEITFQLLDGTQAAEHEAELQALHAEVYADPPYQRTEDDAAADQYARRFRVQRRQPGFVLAEA
Ga0210393_114628512	3300021401	Soil	VSAPDITFELLDGRQAAAHADELQVLHAEVYADPPYRRTDDAAVFADRFR
Ga0210385_108437831	3300021402	Soil	VSAPDITFELLDGRQAAAHADELQVLHAEVYADPPYRRTDDAAVFADR
Ga0210385_109622271	3300021402	Soil	VTTPGMTFQLLDGTRAGPLAAELEALHAEIYAGPPSGRDDDAALFARRF
Ga0210385_111465522	3300021402	Soil	VTTPGMTFQLLDGSQAGPLAAELEALHAEIYAGPPSGRDDDAALFARRFRVQH
Ga0210397_113734461	3300021403	Soil	VPAPEITFQLLDSTQAAEHEAELQALHAEVYADPPYHRTE
Ga0210386_114469911	3300021406	Soil	LSAPDITFELVDGAQAAAHEDELQALHAEVFADPPYRQA
Ga0210383_110025762	3300021407	Soil	VVVSAPEITFQLLDGKQAAEHEAELQALHAEVYAGPPYRRGDDAAMFAGRFRVQRRQP
Ga0210384_103926551	3300021432	Soil	VSAPDIMFELLDGRQAAAHADELQVLHAEVYADPPYRRTGDAAVFADR
Ga0210390_109208631	3300021474	Soil	MTFQLLDGMQAAEHTGELHEMHAEVYAGPPYLREDDAGQFER
Ga0210390_111184831	3300021474	Soil	VAVPAPEITFQLLDGAQAAEHESELQDLHAEVYADPPYRNTDDEGEYGRRLRVQRRQPGFALAE
Ga0210392_100047761	3300021475	Soil	VPTADLAFRLLDGSEAAAHQDELGVLHAEVYADPPYQCQQD
Ga0210398_110582341	3300021477	Soil	VVVSAPDITFQLLDGPQAAAHADELRVLHAEVYADPPY
Ga0210402_102323834	3300021478	Soil	MLLVSTIDIAFSLLDGRAAAEQAVDLRALHAEVYADPPYAWRDDADVFAERFRV
Ga0126371_133712462	3300021560	Tropical Forest Soil	VSAPGIEFQSLGGKQAAEHAGELLALHGEVYAEAPYRRDENGEELARR
Ga0126371_136314262	3300021560	Tropical Forest Soil	VGVSVPGIGFQLLGGQQAAEHAGELLALHAEVYAE
Ga0207684_102139913	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTFQLLDGRQAAEHAAELQALHAEVYAGPPYQREDDTGFADRFRV
Ga0207684_104656211	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VAVPAPDLTFQLLDGAQAAALAGELEALHAEVCAGTPCRRDEDAA
Ga0209648_103555491	3300026551	Grasslands Soil	VAVPAPDLTFQLLDGAQAAALAGELEALHAEVCAGTPY
Ga0209648_108052962	3300026551	Grasslands Soil	MPAPEITFRLLDGTQAAAHADELQALHAEVYADPPYGRHDDAALFADRFRVQRRQP
Ga0209116_10361541	3300027590	Forest Soil	MVVFSPGVAFELLDGTQAAAHADELQELHASVYADPPYGRTPDAALFAGRFRV
Ga0209330_11451182	3300027619	Forest Soil	VAVPAPEITFQLLDGTEAAEHEAELQALHAEVYADPPYRRTGDDAGQ
Ga0209693_100079361	3300027855	Soil	VAVPAPEITFQLLDGTQAAEHEAELQALHAEVYADPPYHRTEDDNDADQYARRF
Ga0209693_100700641	3300027855	Soil	VPAPEITFQLLAGRAAAEHADELQGLHAEVYAAPPYRRPDDAGRFADR
Ga0209579_103613421	3300027869	Surface Soil	VSAPDLTFRLLDGRQAAAHASELQALHAEVGTDDADGAVPFADRFLV
Ga0209465_105392572	3300027874	Tropical Forest Soil	VSAPGITFLLLGGQPATEHAGELQKLHAEVYAEPPY
Ga0209169_104615751	3300027879	Soil	VTTPGMTFQLLDGTRAGPLAAELEALHAEIYAGPPSGRDDDAALFARR
Ga0265353_10357742	3300028015	Soil	VVVSAPDITFQLLDGPQAAAHADELQVLHAEVYADP
Ga0302220_100702721	3300028742	Palsa	VVATPDIMFQLLDGIQAAAHAEELQALHAEVYADPPYRRSQDAALFA
Ga0302234_100225494	3300028773	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTADAA
Ga0302231_103773522	3300028775	Palsa	VATPDIMFQLLDGVQAAAHAEELRALHAEVYADPPYRRSQDDAL
Ga0302223_102848921	3300028781	Palsa	VVVVPASEMTFQLLGGRQAAAHADELQALHAEVYADPPY
Ga0302157_105784531	3300028813	Bog	VVVVPTSEMTFQLLDGTQAAAHADELQALHAEVYADPPYRQQDDAALFADRFRV
Ga0302218_103019621	3300028863	Palsa	MVSSPGIAFQLLDGTQAAAHADELQALHAEVYADPPYGRD
Ga0302154_103344931	3300028882	Bog	VVVVPTSEMTFQLLDGTQAAAHADELQALHAEVYADPPYRQQDDA
Ga0311369_114456291	3300029910	Palsa	VSSPGIAFQLLDGTQAAAHADELQALHAEVYADPPYGRNQDAA
Ga0311352_103117173	3300029944	Palsa	MVSSPGIAFQLLDGTQAAAHADELQALHAEVYADPPYGRNQDAA
Ga0311331_114142281	3300029954	Bog	VVVVPTSEMTFQLLDGTQAAAHADELQALHAEVYADPPYRQQYDAA
Ga0311339_115792881	3300029999	Palsa	VATPDIMFQLLDGIQAAAHAEELQALHGEVYADPPYRRSQ
Ga0302306_100412822	3300030043	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTADAALF
Ga0302181_100421031	3300030056	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPY
Ga0302176_100570502	3300030057	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTEDAA
Ga0311353_100943401	3300030399	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTA
Ga0302184_102546702	3300030490	Palsa	VSSPGIAFQVLDGTQAAAHADELQELHASVYADPPYGCTDDAALFAERFRVQ
Ga0311356_108329441	3300030617	Palsa	VATPDIMFRLLDGIQAAEHSDELQALHAEVYADPPYRRS
Ga0307482_12393681	3300030730	Hardwood Forest Soil	MSEPGVTFELLSGLQAAEHAGDLEALHAEVCAGEAG
Ga0265460_106598292	3300030740	Soil	VAVPAPEIMFQLLDGTQAAEHEAELQALHAEVYADPPYRRTGDGTGQYARRF
Ga0302180_105577921	3300031028	Palsa	MVSSPGIAFQLLDGTEAAAHADELQALHAEVYADPPYGRTEDAAPFAGRFL
Ga0302307_101316441	3300031233	Palsa	VSAPEIAFQLLDGSQAAAHADELQALHAEVYADPPYRRTEDAALFAGRFRVQRRQP
Ga0302325_118013801	3300031234	Palsa	VATPDIMFQLLDGIQAAAHAEELQALHGEVYADPPYRRS
Ga0318561_107022321	3300031679	Soil	VSAPGIAFQLLDGRQAAAHAGELQALHAEVYADPPYRQAADAARFAGRFRVQ
Ga0318572_103269722	3300031681	Soil	VPGPGITVALLGGRQAGERARELLELHAEVYAEPPYR
Ga0318560_107890151	3300031682	Soil	VAAPEITFQLLDGTQAAAHEAELQALHAEVYAGPPYRR
Ga0310686_1052161124	3300031708	Soil	VPAPEITFQLLDGAQAAEHESELQDLHAEAYADPPYRNTDDEGEYARRLRV
Ga0307476_105055582	3300031715	Hardwood Forest Soil	MKVGVPESEMTFQLLDGAQAAAHVDELQALHAEVYSAPPYRRTGDAAEFAERF
Ga0307476_111562611	3300031715	Hardwood Forest Soil	VSAPDIMFELLDGRQAAAHADELQVLHAEVYADPPYRRTD
Ga0306917_102652863	3300031719	Soil	VADITFQLLDGAQAAAHQAELQALHAEVYAGPPYRRDDNVARFAD
Ga0318535_101334321	3300031764	Soil	MSVPGIAFGLLGGEQAAEHAGELLDLHAEVYAEAPYRRNEDG
Ga0318526_104744782	3300031769	Soil	VAAPEITFQLLDGTQAAAHEAELQALHAEVYAGPPYR
Ga0318546_108157461	3300031771	Soil	VSGPGITFDVLDGRQAAAHADELQALHAEVYADPPYRLAGDAARFAERF
Ga0318567_102510193	3300031821	Soil	MSVPGIAFGLLGGKQAAEHAGELLALHAEVYAEAPYRRDEDGDQLAR
Ga0318517_100246261	3300031835	Soil	VADITFQLLDGAQAAAHQAELQALHAEVYAGPPYRRDDNVARFA
Ga0318495_102666252	3300031860	Soil	VSTPDIAFQLISGREAAERAEEFQALHAEVYAEPPYR
Ga0306925_106877481	3300031890	Soil	MSVPGIAFGLLGGKQAAEHAGELLALHAEVYAEAPYRR
Ga0318520_103084721	3300031897	Soil	VSAPGITFQLLDGQAAAEHAGELQKLYAEVHAEPPYRRA
Ga0306923_113856671	3300031910	Soil	VSAPGIAFQLLDGRQAAAHAGELQALHAEVYADPPYRQAADAAR
Ga0318562_105539241	3300032008	Soil	VSAPGITFQLLDGQAAAEHAGELQKLYAEVHAEPTY
Ga0318563_107691552	3300032009	Soil	VAAPEITFQLLDGTQAAAHEAELQALHAEVYAGPPYRRDDDAALFA
Ga0306920_1008571151	3300032261	Soil	VPAPEITFQLLDGQQAAGHAAELQALHAEVYADPPYRREHDAGFADRVRS
Ga0335081_101167561	3300032892	Soil	VPAPEISFRLLDGVQAAGHAPELRSLHAEVYAAPPYQGGEDAAEFARRFRVQCRQPGF
Ga0335081_107673731	3300032892	Soil	VTLSAPGITIRLLDGRQAAAHADELQALHAEVYADPPYRLAGDGFAERFRVQRRQ
Ga0335074_103270171	3300032895	Soil	VTTPDITFQLLDGRQAAAHAAELQALHAEVYAAPPFER
Ga0335074_103452293	3300032895	Soil	VPAPEITFQLLGGREAAGHAGELQALHAEVYAAPPYRREEN
Ga0335075_112532052	3300032896	Soil	VPAPEITFQLLDGTQAAEHEPELQALHAEVYADPP
Ga0335076_108670051	3300032955	Soil	MVTTPGMTYRLLDGMQAAAHADELEALHAEVYAEPPYDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences