Metagenome / Metatranscriptome Family F066910

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066910
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	64 residues
Representative Sequence	MDDDRAREIATAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLPHPGDAKR
Number of Associated Samples	103
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.39 %
% of genes near scaffold ends (potentially truncated)	25.40 %
% of genes from short scaffolds (< 2000 bps)	87.30 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.825 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (31.746 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.937 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.39% β-sheet: 0.00% Coil/Unstructured: 57.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01425	Amidase	42.86
PF07683	CobW_C	21.43
PF08241	Methyltransf_11	16.67
PF03417	AAT	1.59
PF05988	DUF899	0.79
PF10431	ClpB_D2-small	0.79
PF00296	Bac_luciferase	0.79
PF04468	PSP1	0.79
PF13239	2TM	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	42.86
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	21.43
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	1.59
COG1774	Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development)	Signal transduction mechanisms [T]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.29 %
Unclassified	root	N/A	3.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	51.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.35 %
Unclassified	root	N/A	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.76 %
Unclassified	root	N/A	3.17 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.90 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	6.35 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	6.35 %
Unclassified	root	N/A	3.17 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.38 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.59 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.59 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.90 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	6.35 %
Unclassified	root	N/A	3.17 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.38 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.59 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.59 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	11.90 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	6.35 %
Unclassified	root	N/A	3.17 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	2.38 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.59 %
Hyphomicrobium sulfonivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	0.79 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2060510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105348678	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300000956\|JGI10216J12902_115483522	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300004114\|Ga0062593_100340137	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300004156\|Ga0062589_102730601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300004480\|Ga0062592_100373869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1120	Open in IMG/M
3300004643\|Ga0062591_102447528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300004643\|Ga0062591_102461238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	546	Open in IMG/M
3300005093\|Ga0062594_101195172	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005093\|Ga0062594_101512178	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300005175\|Ga0066673_10794882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005184\|Ga0066671_10128582	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300005333\|Ga0070677_10648995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300005336\|Ga0070680_101446297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300005347\|Ga0070668_101453345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	626	Open in IMG/M
3300005353\|Ga0070669_100635322	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005364\|Ga0070673_102151681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	530	Open in IMG/M
3300005366\|Ga0070659_101884110	Not Available	536	Open in IMG/M
3300005406\|Ga0070703_10587837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005440\|Ga0070705_100668582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300005440\|Ga0070705_101223530	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005441\|Ga0070700_101604978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300005451\|Ga0066681_10421901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	819	Open in IMG/M
3300005454\|Ga0066687_10098126	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300005457\|Ga0070662_101787390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	531	Open in IMG/M
3300005467\|Ga0070706_100974950	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005529\|Ga0070741_10000219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	217645	Open in IMG/M
3300005529\|Ga0070741_10245566	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300005545\|Ga0070695_101280145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300005549\|Ga0070704_100220825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1541	Open in IMG/M
3300005617\|Ga0068859_100567484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300005841\|Ga0068863_101153674	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005842\|Ga0068858_100434260	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300005844\|Ga0068862_101608276	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005985\|Ga0081539_10059499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2103	Open in IMG/M
3300005985\|Ga0081539_10159050	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300006046\|Ga0066652_100350018	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300006046\|Ga0066652_102014285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	514	Open in IMG/M
3300006049\|Ga0075417_10201251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	943	Open in IMG/M
3300006196\|Ga0075422_10084310	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006603\|Ga0074064_11678726	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300006791\|Ga0066653_10236249	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006844\|Ga0075428_100293490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1749	Open in IMG/M
3300006844\|Ga0075428_100322235	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300006844\|Ga0075428_100510082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1286	Open in IMG/M
3300006844\|Ga0075428_102308857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	554	Open in IMG/M
3300006845\|Ga0075421_100303283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1941	Open in IMG/M
3300006845\|Ga0075421_100364977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1742	Open in IMG/M
3300006847\|Ga0075431_101594757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300006854\|Ga0075425_101862351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300006871\|Ga0075434_102242929	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006880\|Ga0075429_100063559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3215	Open in IMG/M
3300006953\|Ga0074063_13792681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	618	Open in IMG/M
3300006954\|Ga0079219_11696771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	585	Open in IMG/M
3300006969\|Ga0075419_10654543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300009094\|Ga0111539_10017453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium sulfonivorans	8886	Open in IMG/M
3300009094\|Ga0111539_12751486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	570	Open in IMG/M
3300009100\|Ga0075418_10240676	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300009100\|Ga0075418_10251078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1884	Open in IMG/M
3300009100\|Ga0075418_10418809	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300009137\|Ga0066709_100687046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300009143\|Ga0099792_11097741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	536	Open in IMG/M
3300009147\|Ga0114129_13342703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300009156\|Ga0111538_11103755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	1003	Open in IMG/M
3300009162\|Ga0075423_10204727	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300009162\|Ga0075423_12286016	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009162\|Ga0075423_12287115	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009545\|Ga0105237_12733258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300009609\|Ga0105347_1304784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	669	Open in IMG/M
3300009819\|Ga0105087_1070307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	607	Open in IMG/M
3300010371\|Ga0134125_11374245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	770	Open in IMG/M
3300010373\|Ga0134128_11658971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300010375\|Ga0105239_10890365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300010399\|Ga0134127_13247333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	531	Open in IMG/M
3300011415\|Ga0137325_1093915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300011440\|Ga0137433_1043501	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300011440\|Ga0137433_1304875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	517	Open in IMG/M
3300012930\|Ga0137407_12150336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300012955\|Ga0164298_11088810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300012986\|Ga0164304_10266371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1157	Open in IMG/M
3300012986\|Ga0164304_10836675	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012989\|Ga0164305_10681766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300013306\|Ga0163162_12267243	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300013308\|Ga0157375_12336111	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300014326\|Ga0157380_10670148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1038	Open in IMG/M
3300014969\|Ga0157376_11906446	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300015195\|Ga0167658_1005214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4481	Open in IMG/M
3300015245\|Ga0137409_10866019	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300015371\|Ga0132258_10544127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2909	Open in IMG/M
3300015373\|Ga0132257_101771848	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300015374\|Ga0132255_101283586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1104	Open in IMG/M
3300017659\|Ga0134083_10563276	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300017792\|Ga0163161_10901481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300017792\|Ga0163161_11880169	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300017936\|Ga0187821_10178912	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300018060\|Ga0187765_10977133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300018083\|Ga0184628_10259963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	912	Open in IMG/M
3300018422\|Ga0190265_10236181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1866	Open in IMG/M
3300018468\|Ga0066662_11143793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300018469\|Ga0190270_10101783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2204	Open in IMG/M
3300018482\|Ga0066669_11475918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	617	Open in IMG/M
3300021082\|Ga0210380_10128514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300024347\|Ga0179591_1095475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2902	Open in IMG/M
3300025923\|Ga0207681_10653600	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300025936\|Ga0207670_10428854	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300025941\|Ga0207711_10184045	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300026498\|Ga0257156_1102371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	596	Open in IMG/M
3300027324\|Ga0209845_1038067	Not Available	767	Open in IMG/M
3300027815\|Ga0209726_10024239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4991	Open in IMG/M
3300027880\|Ga0209481_10138107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1198	Open in IMG/M
3300027907\|Ga0207428_10008427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	9308	Open in IMG/M
3300027907\|Ga0207428_10480126	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300027909\|Ga0209382_10040717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5564	Open in IMG/M
3300027909\|Ga0209382_10660312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1130	Open in IMG/M
3300028380\|Ga0268265_11750709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300028381\|Ga0268264_10848740	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300028381\|Ga0268264_12352638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	539	Open in IMG/M
3300028792\|Ga0307504_10395334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300028889\|Ga0247827_11088535	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031965\|Ga0326597_10866795	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300033550\|Ga0247829_10111352	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300033551\|Ga0247830_11550693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	530	Open in IMG/M
3300034155\|Ga0370498_000235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21034	Open in IMG/M
3300034155\|Ga0370498_090938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	704	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.97%
Host-Associated	Host-Associated	46.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.62%
Plants	Host-Associated → Plants	46.03%
Aquatic	Environmental → Aquatic	6.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.70%
Sediment	Environmental → Aquatic → Sediment	3.97%
Freshwater	Environmental → Aquatic → Freshwater	2.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.32%
Loam	Environmental → Terrestrial → Soil → Loam	7.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.38%
Sand	Environmental → Terrestrial → Soil → Sand	1.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.59%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.59%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_20605103	3300000033	Soil	MTNDEQHARQIATAEGLTKLDEKQLAQLAQSVASARELAGKLPKDLHWSEEIALVFRLPTPEDNGR*
INPhiseqgaiiFebDRAFT_1053486782	3300000364	Soil	MENDRARQIALAAGLTALDEKHLTQLAXSXASXRELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
JGI10216J12902_1154835222	3300000956	Soil	VKVMKDERARELAAAAGLTKLDEKHLAQLAQGIASARDLAAKLPKDLHWGEEIALAFRLAPPAEGGKR*
Ga0062593_1003401372	3300004114	Soil	MDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0062589_1027306011	3300004156	Soil	MDEERVREIAAAAGLDKLTDKQLTEFAAAIASGRALAEMLPKDLHWSEESALVFRLPMPARSAR*
Ga0062592_1003738692	3300004480	Soil	LDGVTIMDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0062591_1024475282	3300004643	Soil	MMDDDRAREIATATGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0062591_1024612382	3300004643	Soil	MENDRAREIAIAAGLTKLDDKHMAQLANSVASAREVGGKLPKDLHWSEEIALVFRLPDTKDAPP*
Ga0062594_1011951722	3300005093	Soil	MDDDRAREIATAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0062594_1015121782	3300005093	Soil	MTTDKDRALEIASAAGLTVLDEKHRAQLASSVASARELAGKLPKDLHWSEEIALIFSLPDRGSAKP*
Ga0066673_107948822	3300005175	Soil	MENDRARQIALAAGLTALDEKHLAQLASSVASGHELSAKLPKDLHWSEEIALTFRLPGSGSAKR*
Ga0066671_101285823	3300005184	Soil	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0070677_106489952	3300005333	Miscanthus Rhizosphere	MAIGDDERAQQVAALTGLTKLEAKHLAQLANSVASAREAGAKLPKDLHWSEEIALIFRLPVPGSGKP*
Ga0070680_1014462971	3300005336	Corn Rhizosphere	MTIDEKHARLVATAAGLTKLDEKHLAQLALSIASARELAGKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0070668_1014533452	3300005347	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIALTFRLPGSGSAKR*
Ga0070669_1006353222	3300005353	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIALTFRLPGSGNAKR*
Ga0070674_1017551752	3300005356	Miscanthus Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEI
Ga0070673_1021516812	3300005364	Switchgrass Rhizosphere	IALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0070659_1018841102	3300005366	Corn Rhizosphere	MDEERVREIAAAAGLDKLTDKQLTEFAAAIASGRALAEMLPKDLHWSEESALVFRLPMPARSAR
Ga0070703_105878372	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDETHARQIATAAGLTRLDERQLAQLALSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0070705_1006685822	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTLRLPSSGSAKR*
Ga0070705_1012235302	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RQDLDGVTIMDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0070700_1016049781	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LDGVTIMDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVF
Ga0066681_104219011	3300005451	Soil	MTNDETRARLVATGAGLTKLDEKHLAQLAQSVASARELAGKLPQDLHWSEEIALVFRLPRPGD
Ga0066687_100981262	3300005454	Soil	MENDRARQIALAAGLTALDEKHLTQLASSLASGRELSAKLPKDLHWSEEIALTFRLPGSGSAKR*
Ga0070662_1017873902	3300005457	Corn Rhizosphere	LAAGLTALDEKHLTQLTSSVASGRELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0070706_1009749501	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VMKDERARELAAVVGLTKLDEKHLAQLAQGIASARELAAKLPKDLHWGEEIALTFRLAPPAGGKR*
Ga0070741_1000021983	3300005529	Surface Soil	MANDEERARDIAAAAGLSRLTDEHLAQLAKGVASIRELAAKLPKDLHWSEETAQVFRLPRPRK*
Ga0070741_102455662	3300005529	Surface Soil	MDKDRTQKVAADAGLGRLDDRHLTQLANGIASARELAGQLPKDLHWSEEIALTFRLPAPGRSKP*
Ga0070695_1012801451	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALVF
Ga0070704_1002208253	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDDDRAREIATAAGLTKLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGEAKR*
Ga0068859_1005674842	3300005617	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALVFRLPAPGSAKP*
Ga0068863_1011536742	3300005841	Switchgrass Rhizosphere	MENDRARRIALAAGLTALDEKHLTQLANSLASGRELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0068858_1004342602	3300005842	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0068862_1016082762	3300005844	Switchgrass Rhizosphere	IDGVTTMDDDRAREIATAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLAAPGDAKR*
Ga0081539_100594993	3300005985	Tabebuia Heterophylla Rhizosphere	MDERTREAAAAAGLDKLDEKQLDQLATGIASTHELAGKLPKDLHWSEEPAHVFRLPVSASRKP*
Ga0081539_101590502	3300005985	Tabebuia Heterophylla Rhizosphere	MDKDHAREIAEADGLTRLSDKHLDQLAQAVASARELAGRLPKDLHWSEEIALALRLPTPKETKR*
Ga0066652_1003500182	3300006046	Soil	MENDRARQIALAAGLTALDEKHLTQLASSLASGRELSAKLPKDLHWSEEIALTLRLPSSGSAKR*
Ga0066652_1020142852	3300006046	Soil	MTNDETRARLVATGAGLTKLDEKHLAQLAQSVASARELAGKLPQDLHWSEEIAL
Ga0075417_102012512	3300006049	Populus Rhizosphere	MDKDLAKEIAAAEGLPKLDEKQLTQLAQGVASARELAQKLPKDLHWSEEIALIFRLPPSGEPKR*
Ga0075422_100843102	3300006196	Populus Rhizosphere	SRVCGGERRTGTMDKDRAEEIATAEGLTKLDEKQLAQLTQSVASARELAGKLPKDLHWSEEIAVVFRLPTPEDTGR*
Ga0074064_116787262	3300006603	Soil	LAAGLTALDEKHLTQLANSLASGRELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0066653_102362492	3300006791	Soil	MENDRARQIALAAGLTALDEKHLTQLANSLASGRELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0075428_1002934901	3300006844	Populus Rhizosphere	MDKDRAEEIATAEGLTKLDEKQLAQLTQSVASARELAGKLPKDLHWSEEIAL
Ga0075428_1003222352	3300006844	Populus Rhizosphere	MTDDETHARQIATAAGLTRLDERQLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGDAKR*
Ga0075428_1005100822	3300006844	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQLAQSVASGRELATMLPKDLHWSEEIALIFRLPPSGESKR*
Ga0075428_1023088572	3300006844	Populus Rhizosphere	MMDDNRTREIAMAAGLTNLDERHLAQLALSVASARELAAKLPKDLHWSEEIALVFHLPRPGDAKR*
Ga0075421_1003032834	3300006845	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALIFRL
Ga0075421_1003649774	3300006845	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQLAQSVASGRELATMLPKDLHWSEEIALIFRLPPSG
Ga0075431_1015947572	3300006847	Populus Rhizosphere	MDKDLAKEIAAAEGLPKLDEKQLTQLAQGVASARELAQKLPKDLHWSEEIALIFRLPPSGESKR*
Ga0075425_1018623512	3300006854	Populus Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASGRELSAKLPKDLHWSEEIALT
Ga0075434_1022429292	3300006871	Populus Rhizosphere	MDQISAKQIAAAAGLTKLDEKHLGQLALSIASARELAAKLPKDLHWSKEIALTFRLPRPGDAKP*
Ga0075429_1000635592	3300006880	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALIFRLPTPKDTGR*
Ga0074063_137926812	3300006953	Soil	MENDRARQIALAAGLTALDEKHLTQLASSLASGRELSAKLPKDLHWSEEIALTLRLPGSGSAKR*
Ga0079219_116967712	3300006954	Agricultural Soil	SSASSKGASAWTMENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0075419_106545432	3300006969	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALICRLPPSGESKR*
Ga0111539_100174537	3300009094	Populus Rhizosphere	MDKDRAEEIATAEGLTKLDEKQLAQLTQSVASARELAGKLPKDLHWSEEIAVVFRLPTPEDTGR*
Ga0111539_127514862	3300009094	Populus Rhizosphere	MDEDRAHEIATAAGLTKLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGEAKR*
Ga0075418_102406763	3300009100	Populus Rhizosphere	MTNDETHARQIATAAGLTRLDERQLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGDAKR*
Ga0075418_102510782	3300009100	Populus Rhizosphere	MDKDRAEEIATAEGLTKLDEKQLAQLTQSVASARELAGKLPKDLHWSEEIALVFRLPTPEDTGR*
Ga0075418_104188091	3300009100	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALIFRLPPSGESKR*
Ga0066709_1006870462	3300009137	Grasslands Soil	MTNDETRARLVATGAGLTKLDEKHLAQLAQSVASARELAGKLPQDLHWSEEIALVFRLPRPGDTKR*
Ga0099792_110977411	3300009143	Vadose Zone Soil	MTTDNDRAREIAAAAGLTKLGEKHLAQLAASVASGRELAGKLPKDLHWSEEIALTFRLPGPGNAKR*
Ga0114129_133427032	3300009147	Populus Rhizosphere	MSSEDSQARLIATAAGLAKLDGKHLAQFAQSVASSRELAAKLPKDLHWSEEIALTFRLPVPPGGAKP*
Ga0111538_111037552	3300009156	Populus Rhizosphere	MDKDLAKEIAAAEGLPKLDEKQLTQLARGVASARELAQKLPKDLHWSEEIALIFRLPPSGESKR*
Ga0075423_102047272	3300009162	Populus Rhizosphere	MENDRARQIALAAGLTALDAKHLTQLANSLASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0075423_122860162	3300009162	Populus Rhizosphere	DEHRAREIAAAAGLTKLDERHLAQLAQSVASARELAGKLPQDLHWSEEIALVFRLPRPGDTQR*
Ga0075423_122871152	3300009162	Populus Rhizosphere	MTIDENHARLIATAAGLTSLDEKHLAQLAQSVASARELAGKLPKDLHWSEEVALVFRLPIPGDAKR*
Ga0105237_127332581	3300009545	Corn Rhizosphere	MHRAMTTDKDRALEIASAAGLTVLDEKHRAQLASSVASARELAGKLPKDLHWSEEIALI
Ga0105347_13047842	3300009609	Soil	MTNDETHARQIATAAELTRLDEKQLAQLALSVASARELAGKLPKDLHWSEEIALVFRLPHPGDAKR*
Ga0105087_10703072	3300009819	Groundwater Sand	MLLSFWESEGKVVMSTMDNDRAREIAAAERLTSLSERQLAQLVQGIASARELAEKLPKELHWSEEIALVFRLPQPGSVER*
Ga0134125_113742451	3300010371	Terrestrial Soil	MTIDENNARVVATAAGLAKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLPAPGEAKR*
Ga0134128_116589712	3300010373	Terrestrial Soil	MAIGDDERAQQVAALTGLTNLEAKHLAQLANSVASAREAGAKLPKDLHWSEEIALIFRLPVPGSGKP*
Ga0105239_108903652	3300010375	Corn Rhizosphere	MAIGDDERAQQVAALTGLTKLEAKHLAQLANSVASAREAGAKLPKDPHWSEEIALIFRLPVPGSGKP*
Ga0134127_132473332	3300010399	Terrestrial Soil	DDRAREIARAAGLSNLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLPAPGEAKR*
Ga0137325_10939152	3300011415	Soil	MKDERARELAAAAGLTKLDEKHLAQLAQGIASARELAAKLPKDLHWGEEIALAFRLAPPEGGKR*
Ga0137433_10435011	3300011440	Soil	TAAGLTKLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPHPGVANR*
Ga0137433_13048751	3300011440	Soil	MTNDKDHARQIATAAGLTKLDEKHLAQLALSVASARELAGKLPKDLHWSEEMALVFRLPSPGDAKR*
Ga0137407_121503362	3300012930	Vadose Zone Soil	MTIEDDRAREIAGAADLTALDGKHLAQLANAVASGRELSAKLPKDLHWSEEIALVFRLPDPAREKP*
Ga0164298_110888102	3300012955	Soil	MAIEDDERARQIAALTGLTKLEAKHLAQLANSVASARDASAKLPKDLHWSEEIALVFRLPAPGSAKP*
Ga0164304_102663712	3300012986	Soil	SAMTNDETRARLVATGAGLTKLDEKHLAQLAQSVASARELAGKLPQDLHWSEEIALVFRLPRPGDTQR*
Ga0164304_108366752	3300012986	Soil	MEDDRARQIALAAGLTALDAKHLTQLASSVASERELSAKLPKDLHWSEEIALTLRLPGSGSAKR*
Ga0164305_106817662	3300012989	Soil	MAIEDDERARQIAALTGLAKLQAKHLAQLANSVASARDASAKLPKDLHWSEEIALVFRLPAPGSAKP*
Ga0163162_122672433	3300013306	Switchgrass Rhizosphere	MAMEDDRTRQVALAAGLAVLDEKHLAQLVNSVASGRELAGKLPRDLHWSEEIALIFRLPVPGSGKP*
Ga0157375_123361112	3300013308	Miscanthus Rhizosphere	MHRAMTTDKDRALEIASAAGLTVLDEKHRAQLASSVASARELAGKLPKDLHWSEEIALIFSLPDRGSAKP*
Ga0157380_106701482	3300014326	Switchgrass Rhizosphere	MDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGDAKR*
Ga0157376_119064461	3300014969	Miscanthus Rhizosphere	MEKDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR*
Ga0167658_10052144	3300015195	Glacier Forefield Soil	MSEDNAKSLAAALGLAKLDAGQLAQLAKSIESGREAAAKLPKDLHWSEESALVFRLPMPADNTP*
Ga0137409_108660192	3300015245	Vadose Zone Soil	RAREIAAAAGLTKLDDKHLAQLAAGIASGRELAGKLPKDLHWSEEIALTFRLPGPGSAKR
Ga0132258_105441273	3300015371	Arabidopsis Rhizosphere	MSMDKDKDEARRVATAAGLTKLTDRHLTELARGVASGRELSSKLPKDLHWSEEIALVFRLPQPREASR*
Ga0132257_1017718482	3300015373	Arabidopsis Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALTFRLPGSGSAKR*
Ga0132255_1012835862	3300015374	Arabidopsis Rhizosphere	MAIGDDERAQQVAALPGLTKLEAKHLAQLANSVASAREAGAKLPKDLHWSEEIALIFRLPVPGSGKP*
Ga0134083_105632762	3300017659	Grasslands Soil	ADLTALDGKHLAQLANAVASGRELSARLPKDLHWSEEIALIFRLPDPAREKP
Ga0163161_109014813	3300017792	Switchgrass Rhizosphere	MENDRAREIAIAAGLTKLDDKHMAQLANSVASAREVGGKLPKDLHWSEEIALVFRLPDTKDAQP
Ga0163161_109142482	3300017792	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIA
Ga0163161_118801691	3300017792	Switchgrass Rhizosphere	DERAQQVAALTGLTKLEAKHLAQLANSVASAREAGAKLPKDLHWSEEIALIFRLPVPGSGKP
Ga0187821_101789122	3300017936	Freshwater Sediment	MSTDESDARRVAIAAGLPKLDGKHLPQLAQAMASTRELGAKLPKDLHWSEEMALTFRLAPRGEAKP
Ga0187765_109771332	3300018060	Tropical Peatland	VPAIAIGDDERAQQVAALTGLTKLEAKHLAQLANSVASAREAGAKLPKDLHWSEEIALIFRLPVPGSGKP
Ga0184628_102599632	3300018083	Groundwater Sediment	MDDDRAREIATAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLPHPGDAKR
Ga0190265_102361812	3300018422	Soil	MDMERAREIAAAAGLTKLDEKHVGQLALGMTSTRELAGKLPKDLHWSEEIALTFRLPGPGSAKR
Ga0066662_111437932	3300018468	Grasslands Soil	VATGAGLTKLDEKHLAQLAQSVASARELAGKLPQDLHWSEEIALVFRLPRPGDTKR
Ga0190270_101017832	3300018469	Soil	MKDERARELAAAAGLTKLDEKHLAQLAQGIASARELAAKLPKDLHWGEEIALAFRLAPPEGGKR
Ga0066669_114759182	3300018482	Grasslands Soil	MENDRARQIALAAGLTALDEKHLTQLASSLASGRELSAKLPKDLHWSEEIALTLRLPSSGSAKR
Ga0210380_101285142	3300021082	Groundwater Sediment	MIMDENRAREIAAAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLPHPGDAKR
Ga0179591_10954753	3300024347	Vadose Zone Soil	MSAEDDRAREIAGAADLTALDGKHLAQLANAVASGRELSAKLPKDLHWSEEIALVFRLPDPAREKP
Ga0207681_106536002	3300025923	Switchgrass Rhizosphere	MDDDRAREIATAAGLTNLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALTFRLPSSGSAKR
Ga0207670_104288542	3300025936	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIALTFRLPSSGSAKR
Ga0207711_101840452	3300025941	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLANSVASERELSAKLPKDLHWSEEIALIFRLPVPGSGKP
Ga0257156_11023712	3300026498	Soil	MEIDRARQIALAAGLTALDEKHLTQLADSVASGRELADKLPKDLHWSEEIALTFRLPGCGSAKR
Ga0209845_10380672	3300027324	Groundwater Sand	EGKVIMSTMDNDRAREIAAAERLTSLSERQLAQLVQGIASARELAEKLPKDLHWSEEIALVFRLPQPGSVER
Ga0209726_100242395	3300027815	Groundwater	MTRDEDQARLIATAAGLTRLNEKHLAQLAQSVASTRELAAKLPKDLHWSEEIALTFRLPMPGDAKP
Ga0209481_101381072	3300027880	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALIFRLPPS
Ga0207428_100084272	3300027907	Populus Rhizosphere	MDKDRAEEIATAEGLTKLDEKQLAQLTQSVASARELAGKLPKDLHWSEEIALVFRLPTPEDTGR
Ga0207428_104801261	3300027907	Populus Rhizosphere	MTNDETHARQIATAAGLTRLDERQLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGDAKR
Ga0209382_100407172	3300027909	Populus Rhizosphere	MDKDRAREIAAAEGLTKLDEKQLAQSVASGRELAEKLPKDLHWSEEIALIFRLPTPKDTG
Ga0209382_106603122	3300027909	Populus Rhizosphere	MDKDLAKEIAAAEGLPKLDEKQLTQLAQGVASARELAQKLPKDLHWSEEIALIFRLPPSGEPKR
Ga0268265_117507092	3300028380	Switchgrass Rhizosphere	MDDDRAREIATAAGLTKLDEKHLAQLAQSVASARELAAKLPKDLHWSEEIALVFRLAAPGDAKR
Ga0268264_108487402	3300028381	Switchgrass Rhizosphere	MENDRARQIALAAGLTALDEKHLTQLASSVASERELSAKLPKDLHWSEEIALTFRLPIPGDAKS
Ga0268264_123526381	3300028381	Switchgrass Rhizosphere	MTTDKDRALEIASAAGLTVLDEKHRAQLASSVASARELAGKLPKDLHWSEEIALIFRLPVPGSGKP
Ga0307504_103953342	3300028792	Soil	MENDRARQIALAAGLTALDEKHLTQLASSVASGRELAGKLPKDLHWSEEIALIFRLPS
Ga0247827_110885352	3300028889	Soil	DVRVGITGAVGTMKDERARELAAAAGLTKLDEKHLAQLAQGIASARELAAKLPKDLHWGEEIALAFRLAPPEGGKR
Ga0326597_108667952	3300031965	Soil	MDNDRTREIALAAGLTALDDKHLAQLAKSIASGREAAGKLPQDLHWSEEIALVFRLPAPESAKP
Ga0247829_101113522	3300033550	Soil	MDKDLAKEIAAAEGLAKLDEKQLTQLAQGIASARELAQKLPKDLHWSEEIALIFRLPPSGESKR
Ga0247830_115506932	3300033551	Soil	MDGVTIMDDDRAREIATAAGLTKLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPAPGEAKR
Ga0370498_000235_15966_16178	3300034155	Untreated Peat Soil	MDEVMIMDENRARQIATAAGLAKPDEKHLAQLALSVASARELAAKLPKDLHWSEEIALVFRLPHPGDAKR
Ga0370498_090938_360_572	3300034155	Untreated Peat Soil	MDEVMIMDENRARQIATAAGLTKLDEKHLAQLALSVASARELAAKLPKDLHWSEEIALIFRLPRPRVAKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences