Metagenome Family F066907

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066907
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	90 residues
Representative Sequence	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Number of Associated Samples	112
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.92 %
% of genes near scaffold ends (potentially truncated)	27.78 %
% of genes from short scaffolds (< 2000 bps)	80.16 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.079 % of family members)
Environment Ontology (ENVO)	Unclassified (36.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.05% β-sheet: 25.81% Coil/Unstructured: 59.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00741	Gas_vesicle	35.20
PF00873	ACR_tran	32.00
PF13188	PAS_8	1.60
PF04972	BON	0.80
PF02374	ArsA_ATPase	0.80
PF01975	SurE	0.80
PF16576	HlyD_D23	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.52 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.38 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.52 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.59 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.52 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.52 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.52 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	59.52 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.79 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104914714	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300002910\|JGI25615J43890_1076881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300004114\|Ga0062593_102418025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300004157\|Ga0062590_102823143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005171\|Ga0066677_10099597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1537	Open in IMG/M
3300005171\|Ga0066677_10099597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1537	Open in IMG/M
3300005174\|Ga0066680_10016263	All Organisms → cellular organisms → Bacteria	3968	Open in IMG/M
3300005330\|Ga0070690_100186260	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300005340\|Ga0070689_100048563	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300005345\|Ga0070692_10768115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300005354\|Ga0070675_101015089	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005356\|Ga0070674_100035942	All Organisms → cellular organisms → Bacteria	3322	Open in IMG/M
3300005406\|Ga0070703_10084156	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005438\|Ga0070701_10069590	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300005441\|Ga0070700_100387722	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005444\|Ga0070694_100291504	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005444\|Ga0070694_101623148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005445\|Ga0070708_100017918	All Organisms → cellular organisms → Bacteria	5920	Open in IMG/M
3300005445\|Ga0070708_100279184	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300005451\|Ga0066681_10990939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005457\|Ga0070662_101468119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300005458\|Ga0070681_11604660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300005467\|Ga0070706_100026317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5353	Open in IMG/M
3300005471\|Ga0070698_102036174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300005543\|Ga0070672_100093940	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300005546\|Ga0070696_100853023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005546\|Ga0070696_101635263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300005549\|Ga0070704_101305865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300005576\|Ga0066708_10888343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005578\|Ga0068854_102117244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005615\|Ga0070702_101767120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300005841\|Ga0068863_101580567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300005844\|Ga0068862_100857562	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300006048\|Ga0075363_100234359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300006196\|Ga0075422_10321251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300006800\|Ga0066660_10751265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300006844\|Ga0075428_101043106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300006845\|Ga0075421_100112426	All Organisms → cellular organisms → Bacteria	3422	Open in IMG/M
3300006845\|Ga0075421_101010485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	941	Open in IMG/M
3300006845\|Ga0075421_102573435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006847\|Ga0075431_100025378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6075	Open in IMG/M
3300006847\|Ga0075431_101468105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300006847\|Ga0075431_101719484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300006852\|Ga0075433_10742505	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300006904\|Ga0075424_101362547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300009088\|Ga0099830_11707882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300009090\|Ga0099827_11313779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300009098\|Ga0105245_10121101	All Organisms → cellular organisms → Bacteria	2445	Open in IMG/M
3300009147\|Ga0114129_10152823	All Organisms → cellular organisms → Bacteria	3158	Open in IMG/M
3300009147\|Ga0114129_10667630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1340	Open in IMG/M
3300009148\|Ga0105243_11679967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300009162\|Ga0075423_10866778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300010375\|Ga0105239_10692298	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300010399\|Ga0134127_12510362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010403\|Ga0134123_12970695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300011269\|Ga0137392_11355847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300011271\|Ga0137393_11213672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300011444\|Ga0137463_1179734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012201\|Ga0137365_10203998	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300012202\|Ga0137363_10570954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300012204\|Ga0137374_10128161	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300012208\|Ga0137376_10796160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300012350\|Ga0137372_10228551	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300012353\|Ga0137367_10189114	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300012360\|Ga0137375_10053536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4386	Open in IMG/M
3300012362\|Ga0137361_10454163	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300012532\|Ga0137373_10412504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300012685\|Ga0137397_10551108	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300012898\|Ga0157293_10360585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012904\|Ga0157282_10382739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012912\|Ga0157306_10386537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300012922\|Ga0137394_10286980	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300012929\|Ga0137404_11723754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300014968\|Ga0157379_12118067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300015374\|Ga0132255_102353934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300018469\|Ga0190270_13241014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300018476\|Ga0190274_13077295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021344\|Ga0193719_10257189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300022756\|Ga0222622_10043501	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300023102\|Ga0247754_1034028	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300025885\|Ga0207653_10054034	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300025899\|Ga0207642_10093186	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300025910\|Ga0207684_10142052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2064	Open in IMG/M
3300025910\|Ga0207684_10720516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300025918\|Ga0207662_10019524	All Organisms → cellular organisms → Bacteria	3859	Open in IMG/M
3300025923\|Ga0207681_10867427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300025926\|Ga0207659_10212142	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300025926\|Ga0207659_11395155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300025930\|Ga0207701_10177598	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300025932\|Ga0207690_10505750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300025933\|Ga0207706_10052160	All Organisms → cellular organisms → Bacteria	3611	Open in IMG/M
3300025937\|Ga0207669_10051906	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300025961\|Ga0207712_11267488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025986\|Ga0207658_10182757	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300026023\|Ga0207677_10743970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300026075\|Ga0207708_10100013	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300026075\|Ga0207708_11918986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300026088\|Ga0207641_11561213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300026116\|Ga0207674_10785482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300026304\|Ga0209240_1011352	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300026319\|Ga0209647_1003245	All Organisms → cellular organisms → Bacteria	12685	Open in IMG/M
3300026328\|Ga0209802_1032388	All Organisms → cellular organisms → Bacteria	2731	Open in IMG/M
3300026548\|Ga0209161_10016149	All Organisms → cellular organisms → Bacteria	5473	Open in IMG/M
3300027909\|Ga0209382_10032150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6317	Open in IMG/M
3300027909\|Ga0209382_10080408	All Organisms → cellular organisms → Bacteria	3843	Open in IMG/M
3300028380\|Ga0268265_10265114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300028381\|Ga0268264_11321472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300028784\|Ga0307282_10616827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300028793\|Ga0307299_10312566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300028811\|Ga0307292_10178900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300028819\|Ga0307296_10128090	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300028828\|Ga0307312_10259675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300028828\|Ga0307312_10414649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300031170\|Ga0307498_10016965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1591	Open in IMG/M
3300031226\|Ga0307497_10216011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300031562\|Ga0310886_10007854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3780	Open in IMG/M
3300031720\|Ga0307469_11969429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300031740\|Ga0307468_101023636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300031913\|Ga0310891_10066652	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300031943\|Ga0310885_10579955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300032012\|Ga0310902_10151950	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300032013\|Ga0310906_11239198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300032122\|Ga0310895_10335296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300032179\|Ga0310889_10570916	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300032180\|Ga0307471_101762233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300034268\|Ga0372943_0613526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	33.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.08%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	1.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.94%
Sediment	Environmental → Aquatic → Sediment	1.59%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.24%
Loam	Environmental → Terrestrial → Soil → Loam	19.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1049147142	3300000956	Soil	MPESPPARVVVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQPDGKWKVTSATTMMPKPTAEGETLPMSKAMREAVKAALRARGFPVL*
JGI25615J43890_10768811	3300002910	Grasslands Soil	MRPESPPARVAVEWMPADQRPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0062593_1024180251	3300004114	Soil	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0062590_1028231431	3300004157	Soil	MESEGLPARVAVEWMPGEQRPDDLDRWQRVVDSAYAGGYGRIRLVLQESGSWKVTSATTMLPRPTVEGETLPMSKAMREAVRAALRARGFPIV*
Ga0066677_100995972	3300005171	Soil	MARDGHARVNVEWMADKGAPADADRWQRVIDSAYAGGYGRVRLVRQADGKWKVTSATTMMPTPAPPGETLPMSKAMREAVRAGLRARGFPVS*
Ga0066677_100995973	3300005171	Soil	MGAEGRSAHVDVEWVPEQGVPADVENWQRVIDGAYAGGYGRVRLVLQAEARWKVTSATTMLPAPSAPGETLTMSKSMREAVRSALRARGFPVV*
Ga0066680_100162634	3300005174	Soil	MPSEGQSARVSVEWVPEQDTPADLDKWQRVIDSAYAGGYGRVRLVLQGDAKWKVTSATTMMRTPSPPGETLPMSKAMREAVRSALRARGFAVL*
Ga0070690_1001862602	3300005330	Switchgrass Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070689_1000485632	3300005340	Switchgrass Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070692_107681151	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAAL
Ga0070675_1010150892	3300005354	Miscanthus Rhizosphere	MAAQAQPARVAVEWMPDKDGPADADKWQRVIDGAYAGGHGRVRLVRQGDGSWKVTSATTMMPNPSREGETLPMSKAMR
Ga0070674_1000359422	3300005356	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070703_100841562	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDEHPEDLEKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0070701_100695904	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKA
Ga0070700_1003877222	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070694_1002915043	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAV
Ga0070694_1016231481	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070708_1000179183	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDECPEDLDTWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0070708_1002791842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEGQSARVSIEWVPEQDTPADLEKWQRVIDSAYAGGHGRVRLVLQSDAKWKVTSATTMMRNPIAPGETLPMSKAMREAVRSALRARGFPVL*
Ga0066681_109909391	3300005451	Soil	MPSEGQSARVSVEWVPEQDTPAELDKWQRVIDSAYAGGHGRVRLVLQSDANWKVTSATTMLRNPVAPGETLPMSKAMREAVRSALRARGFPVL*
Ga0070662_1014681192	3300005457	Corn Rhizosphere	MGSEGLPARVAVEWVPGEESPDDLDKWQRVVDSAYAGGYGRVRLVRQASGSWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070681_116046602	3300005458	Corn Rhizosphere	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070706_1000263176	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDECPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0070698_1020361741	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDECPEDLDTWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAAL
Ga0070672_1000939403	3300005543	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070696_1008530231	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070696_1016352631	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDERPEDLDKWQRVVDTAYAGGYGRVRLVRQADGKWKVTSATTMMPKAFAEGETLPMSKAM
Ga0070704_1013058652	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGPERPPARVAVEWMPGEERPDDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMLPRQTAEGETLPMSKAMREAV
Ga0066708_108883432	3300005576	Soil	MGPEGPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGRWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0068854_1021172442	3300005578	Corn Rhizosphere	VPGEESPDDLDKWQRVVDSAYAGGYGRVRLVRQASGSWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0070702_1017671201	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTSEGETLPMSKAMREAVRAALRARGFPIL*
Ga0068863_1015805672	3300005841	Switchgrass Rhizosphere	MGFEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTSEGETLPMSKAMREAVRAALRARGFPIL*
Ga0068862_1008575621	3300005844	Switchgrass Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMR
Ga0075363_1002343591	3300006048	Populus Endosphere	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTNGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075422_103212512	3300006196	Populus Rhizosphere	GLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0066660_107512652	3300006800	Soil	MGAEGRSAHVDVEWVPEQGVPADVENWQRVIDSAYAGGYGRVRLVLQAEARWKVTSATTMLPAPSAPGETLTMSKSMREAVRSALRARGFPVV*
Ga0075428_1010431062	3300006844	Populus Rhizosphere	MEAEGLPARVAVEWVPGEERPGDLDRWQRVVDSAYAGGYGRVRLVRQSDGAWKVTSATTMLPRPTAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075421_1001124262	3300006845	Populus Rhizosphere	MRPEGPPARVAVEWMPGEERPDDLDKWQRVVDTAYAGGYGRVRLVRQADGKWKVTSATTMLPKQTAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0075421_1010104853	3300006845	Populus Rhizosphere	MRSEGQPARVAVEWVPGEERPGDLDSWQRVVDTAYAGGYGRVRLVHQSDGKWKVTSATTMLPRQLVEGETLPMSKAMREAVRA
Ga0075421_1025734352	3300006845	Populus Rhizosphere	MGSEGLPARVAVEWVPGEECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075431_1000253786	3300006847	Populus Rhizosphere	MEAEGLPARVAVEWVPGEERPGDLDRWQRVVDSAYAGGYGRVRLVRQSDGTWKVTSATTMMPRPTAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075431_1014681052	3300006847	Populus Rhizosphere	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTNGTWKVTSATTMMPKPTVEGETLPMSKAM
Ga0075431_1017194842	3300006847	Populus Rhizosphere	MRSEGQPARVAVEWVPGEERPGDLDSWQRVVDTAYAGGYGRVRLVHQSDGKWKVTSATTMLPRQLVEGETLPMSKAMREAVRAALRARGFPVP*
Ga0075433_107425052	3300006852	Populus Rhizosphere	MGSEGLPARVAVEWVPGEECPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075424_1013625472	3300006904	Populus Rhizosphere	MRPESPPARVAVEWMPGDERPEDLEKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPKAFAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0099830_117078821	3300009088	Vadose Zone Soil	MRPESPPARVAVEWMPGEQRPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWNVTSATTMMPSPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0099827_113137791	3300009090	Vadose Zone Soil	MRPESQPARVAVEWVPAAERPEDLERWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0105245_101211014	3300009098	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGEERPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0114129_101528234	3300009147	Populus Rhizosphere	MRPESPPARVAVEWMPGDEHPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0114129_106676302	3300009147	Populus Rhizosphere	RVAVEWVPGEERPGDLDRWQRVVDSAYAGGYGRVRLVRQSDGTWKVTSATTMMPRPTAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0105243_116799671	3300009148	Miscanthus Rhizosphere	VAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0075423_108667782	3300009162	Populus Rhizosphere	MPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPKAFAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0105239_106922981	3300010375	Corn Rhizosphere	VAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGF
Ga0134127_125103621	3300010399	Terrestrial Soil	VAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQASGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0134123_129706951	3300010403	Terrestrial Soil	WQEDVMGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0137392_113558471	3300011269	Vadose Zone Soil	MPSEGQSARVSVEWVPEQDTPAELEKWQRVIDSAYAGGHGRVRLVLQADATWKVTSATTMMRNPSPPGETLPMSKAMREAVRSALRARGFPVA*
Ga0137393_112136722	3300011271	Vadose Zone Soil	DGMRPESPPARVAVEWMPGDQHPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPSPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0137463_11797342	3300011444	Soil	MGSEGLPARVAVEWVPGEDRPDDLDKWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0137365_102039981	3300012201	Vadose Zone Soil	MGAEGLPARVAVEWVPGEDCPDDLDKWQRVVDSAYAGGYGRVRLVRQPDGKWKVTSATTMMPTPWAEGETLPMSKAMREAVRAVLRARGFPVS*
Ga0137363_105709542	3300012202	Vadose Zone Soil	MPSEGQSARVSVEWVPEQDTPADLDKWQRVIDSAYAGGHGRVRLVLQSDANWKVTSATTMMRNPIAPGETLPMSKAMREAVRSALRARGFAVS*
Ga0137374_101281614	3300012204	Vadose Zone Soil	MAPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVHQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0137376_107961602	3300012208	Vadose Zone Soil	MPSEGQSARVSVEWVPEQDTPAELEKWQRVIDSAYAGGHGRVRLVLQADATWKVTSATTMMRNPSPPGETLPMSKAMREVVRSALRARGFPVA*
Ga0137372_102285511	3300012350	Vadose Zone Soil	VFVEWQPGADRPADADKWQRVIDTAYAGGHGRVRLVRQPEGSWKVTSATTMMPKPTSETETLPMSRAMREAVRAALRARGFPVL*
Ga0137367_101891143	3300012353	Vadose Zone Soil	MRPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0137375_100535362	3300012360	Vadose Zone Soil	MRPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVHQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0137361_104541632	3300012362	Vadose Zone Soil	MPTEGQSARVSVEWVPEQDTPADLDKWQRVIDSAYAGGHGRVRLVLQSDANWKVTSATTMMRNPIAPGETLPMSKAMREAVRSALRARGFAVS*
Ga0137373_104125042	3300012532	Vadose Zone Soil	MAPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP*
Ga0137397_105511082	3300012685	Vadose Zone Soil	MGSEGLPARVAVEWVPGDDRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTAEGETLPMSKAMREAVRAALRARGFPIL*
Ga0157293_103605851	3300012898	Soil	MGSEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMLPRPTVEGETLPMSKAMREAVRAALRARGFPIV*
Ga0157282_103827391	3300012904	Soil	MASEGLPVRVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTNGTWKVTSATTMMPKPTVEGETLPMSKAMRE
Ga0157306_103865371	3300012912	Soil	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREA
Ga0137394_102869802	3300012922	Vadose Zone Soil	MRLEGQPARVAVEWMPGDERPGDLDKWQRVVDSAYGGGYGRVRLVRQADGKWKVTSATTMMPNPIAEGETFPMSKAMREAVRAALRARGFPVP*
Ga0137404_117237541	3300012929	Vadose Zone Soil	MPGDQRPEDLDKWQRVVDSAYAGGYGRVRLVRQAYGKWKGTSATTMMPNPVGEGETLPMSKAM
Ga0157379_121180672	3300014968	Switchgrass Rhizosphere	MGSEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRIRLVLQASGSWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0132255_1023539342	3300015374	Arabidopsis Rhizosphere	VAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL*
Ga0190270_132410142	3300018469	Soil	MAAQAQPARVAVEWMPDKDGPADVDKWQRVIDGAYAGGHGRVRLVRQGDGSWKVTSATTMMPNPTTEGETLPMSKAMREAVRAALRARGFPIL
Ga0190274_130772951	3300018476	Soil	MAAQAQPARVAVEWMPDKDGPADADKWQRVIDGAYAGGHGRVRLVRQGDGSWKVTSATTMMPNPTTEGETLPMSKAMREAVRAALRARGFPIL
Ga0193719_102571891	3300021344	Soil	GTEDGMGSEGLPAPRVAVEWVPGEERPDDLDKWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMLPRQTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0222622_100435014	3300022756	Groundwater Sediment	MGPEGPPARVAVEWMPGEERPDDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMLPRQTAEGETLPMSKAMREAVRAALRARGFPVP
Ga0247754_10340283	3300023102	Soil	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207653_100540342	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDEHPEDLEKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0207642_100931862	3300025899	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207684_101420521	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRPESPPARVAVEWMPGDECPEDLDTWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0207684_107205162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEGQSARVSIEWVPEQDTPADLEKWQRVIDSAYAGGHGRVRLVLQSDAKWKVTSATTMMRNPIAPGETLPMSKAMREAVRSALRARGFPVL
Ga0207662_100195243	3300025918	Switchgrass Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207681_108674271	3300025923	Switchgrass Rhizosphere	LPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207659_102121422	3300025926	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDNCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207659_113951552	3300025926	Miscanthus Rhizosphere	MAAQAQPARVAVEWMPDKDGPADADKWQRVIDGAYAGGHGRVRLVRQGDGSWKVTSATTMMPNPSREGETLPMSKAMREAVRAALR
Ga0207701_101775984	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207690_105057501	3300025932	Corn Rhizosphere	RVAVEWVPGAECPEGVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207706_100521603	3300025933	Corn Rhizosphere	MGSEGLPARVAVEWVPGEESPDDLDKWQRVVDSAYAGGYGRVRLVRQASGSWKVTSATTMLPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207669_100519064	3300025937	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207712_112674882	3300025961	Switchgrass Rhizosphere	MGSEGLPARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207658_101827572	3300025986	Switchgrass Rhizosphere	PGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207677_107439702	3300026023	Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGDNCRADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207708_101000134	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGSEGLPARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0207708_119189862	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGAGGLPARVAVEWVPGEDRPDDLDKWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTAEGETLPMSKAMREAVRAALRARGFPIL
Ga0207641_115612131	3300026088	Switchgrass Rhizosphere	MGFEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTSEGETLPMSKAMREAVRAALRARGFPIL
Ga0207674_107854821	3300026116	Corn Rhizosphere	SEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0209240_10113522	3300026304	Grasslands Soil	MRPESPPARVAVEWMPADQRPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0209647_10032452	3300026319	Grasslands Soil	MPPENPPARVAVEWMPGDERPEDLDKWQRVVDSAYGGGYGRVRIVRQADGKWKVTSATTMMPTPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0209802_10323882	3300026328	Soil	MPSEGQSARVSVEWVPEQDTPADLDKWQRVIDSAYAGGYGRVRLVLQGDAKWKVTSATTMMRTPSPPGETLPMSKAMREAVRSALRARGFAVL
Ga0209161_100161495	3300026548	Soil	MARDGHARVNVEWMADKGAPADADRWQRVIDSAYAGGYGRVRLVRQADGKWKVTSATTMMPTPAPPGETLPMSKAMREAVRAGLRARGFPVS
Ga0209382_100321506	3300027909	Populus Rhizosphere	MEAEGLPARVAVEWVPGEERPGDLDRWQRVVDSAYAGGYGRVRLVRQSDGAWKVTSATTMLPRPTAEGETLPMSKAMREAVRAALRARGFPIL
Ga0209382_100804084	3300027909	Populus Rhizosphere	MRPEGPPARVAVEWMPGEERPDDLDKWQRVVDTAYAGGYGRVRLVRQADGKWKVTSATTMLPKQTAEGETLPMSKAMREAVRAALRARGFPVP
Ga0268265_102651141	3300028380	Switchgrass Rhizosphere	SEGLPARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0268264_113214722	3300028381	Switchgrass Rhizosphere	PARVAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPKPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0307282_106168272	3300028784	Soil	EWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPHPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0307299_103125662	3300028793	Soil	MGPEGPPARVAVEWMPGEERPDDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMLPRQTAEGETLPMSKAMREAVRAALRA
Ga0307292_101789002	3300028811	Soil	TEDGMGPEGPPARVAVEWMPGEERPDDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMLPRQTAEGETLPMSKAMREAVRAALRARGFPIL
Ga0307296_101280904	3300028819	Soil	MGSEGLPAPRVAVEWVPGEQRPDDLDRWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTSEGETLPMSKAMREAVRAALRARGFP
Ga0307312_102596752	3300028828	Soil	MRPESPPARVAVEWMPGDQRPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSAEGETLPMSKAMREAVRAALRARGFPVP
Ga0307312_104146492	3300028828	Soil	MRPESPPARVAVEWMPGDERPEDLDKWQRVVDSAYAGGYGRVRLVRQADGKWKVTSATTMMPNPSTEGETLPMSKAMREAVRAALRARGFPVP
Ga0307498_100169651	3300031170	Soil	MGAEGLPARVAVEWVPGEDRPDDLDKWQRVVDSAYAGGYGRVRLVRQTSGSWKVTSATTMMPRQTAEGETLPMSKAMREAVRAALRARGFPIL
Ga0307497_102160112	3300031226	Soil	MGSEGLPAARVAVEWVPGEECPDDLDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRQTAEGETLPMSKAMREAVRAALRARGFPIL
Ga0310886_100078541	3300031562	Soil	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRA
Ga0307469_119694291	3300031720	Hardwood Forest Soil	MGTEGLPARVAVEWVPGDDHPGDLDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMLPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0307468_1010236362	3300031740	Hardwood Forest Soil	MGSEALPARVAVEWVPGAECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMRKAMREAVRAALRARGFPIL
Ga0310891_100666522	3300031913	Soil	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0310885_105799551	3300031943	Soil	MGSEGLPARVAVEWVPGEECPGDVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0310902_101519503	3300032012	Soil	MGSQGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAM
Ga0310906_112391981	3300032013	Soil	VAVEWVPGAECPEDVDKWQRVVDSAYAGGYGRVRLVRQTSGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0310895_103352962	3300032122	Soil	MGSEGLPARVAVEWVPGDDCPADVDKWQRVVDSAYAGGYGRVRLVRQASGNWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0310889_105709162	3300032179	Soil	GDDCPADVDKWQRVVDSAYAGGYGRVRLVRQTSGTWKVTSATTMMPRPTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0307471_1017622332	3300032180	Hardwood Forest Soil	MGSEGLPARVAVEWVPGEDRPDDLDRWQRVVDSAYAGGYGRVRLVRQSSGSWKVTSATTMMPRQTVEGETLPMSKAMREAVRAALRARGFPIL
Ga0372943_0613526_141_422	3300034268	Soil	MRPEGPLARVAVEWQPETDTPGDVERWQRVVDGAYAGGYGRVRLVLQRDGKWKVTSATTMLPHPASEGETLPMSKAMREAVKAALTARGFPVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066907

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences