Metagenome / Metatranscriptome Family F066887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066887
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	77 residues
Representative Sequence	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRKGMRIVALGVLMLLGAFIIGLFMPNGA
Number of Associated Samples	98
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.40 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (63.492 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.841 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.44% β-sheet: 0.00% Coil/Unstructured: 43.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.24.1.1: Cytochrome c oxidase subunit I-like	d7coha_	7coh	0.75609
a.238.1.1: BAR domain	d1urua_	1uru	0.72471
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.72187
e.32.1.1: Phase 1 flagellin	d1io1a_	1io1	0.72028
f.24.1.1: Cytochrome c oxidase subunit I-like	d3s8ga_	3s8g	0.71761

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF06210	DUF1003	13.49
PF07568	HisKA_2	10.32
PF00072	Response_reg	7.94
PF13442	Cytochrome_CBB3	4.76
PF04972	BON	1.59
PF01814	Hemerythrin	0.79
PF13557	Phenol_MetA_deg	0.79
PF07883	Cupin_2	0.79
PF02518	HATPase_c	0.79
PF03884	YacG	0.79
PF13581	HATPase_c_2	0.79
PF07715	Plug	0.79
PF08818	DUF1801	0.79
PF00011	HSP20	0.79
PF13510	Fer2_4	0.79
PF01593	Amino_oxidase	0.79
PF04378	RsmJ	0.79
PF00199	Catalase	0.79
PF04357	TamB	0.79
PF02627	CMD	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG4420	Uncharacterized membrane protein	Function unknown [S]	13.49
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	10.32
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.79
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.79
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.79
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2961	23S rRNA A2030 N6-methylase RlmJ	Translation, ribosomal structure and biogenesis [J]	0.79
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.79
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.79
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	19.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.79 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.05 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.79 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.79 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.05 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.79 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.79 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.79 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.05 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.79 %
Caulobacter vibrioides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	0.79 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.79 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	19.05 %
Acidisphaera sp. L21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	0.79 %
Rhizobium esperanzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium esperanzae	0.79 %
Caulobacter vibrioides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	0.79 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_100153885	All Organisms → cellular organisms → Bacteria → Proteobacteria	2627	Open in IMG/M
3300005327\|Ga0070658_10006944	All Organisms → cellular organisms → Bacteria	9147	Open in IMG/M
3300005327\|Ga0070658_10086318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2581	Open in IMG/M
3300005329\|Ga0070683_101085147	Not Available	769	Open in IMG/M
3300005334\|Ga0068869_100518440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	997	Open in IMG/M
3300005334\|Ga0068869_100733430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300005336\|Ga0070680_100204659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1665	Open in IMG/M
3300005339\|Ga0070660_100633145	Not Available	895	Open in IMG/M
3300005344\|Ga0070661_101552214	Not Available	559	Open in IMG/M
3300005354\|Ga0070675_101096785	Not Available	732	Open in IMG/M
3300005356\|Ga0070674_100379747	Not Available	1149	Open in IMG/M
3300005364\|Ga0070673_100693164	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005366\|Ga0070659_101345376	Not Available	634	Open in IMG/M
3300005436\|Ga0070713_100215120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1741	Open in IMG/M
3300005437\|Ga0070710_11093505	Not Available	585	Open in IMG/M
3300005455\|Ga0070663_101415605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300005456\|Ga0070678_100413997	Not Available	1174	Open in IMG/M
3300005458\|Ga0070681_10524660	Not Available	1098	Open in IMG/M
3300005458\|Ga0070681_10818037	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005459\|Ga0068867_100117161	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300005529\|Ga0070741_10147255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2374	Open in IMG/M
3300005529\|Ga0070741_10405006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1253	Open in IMG/M
3300005533\|Ga0070734_10699555	Not Available	576	Open in IMG/M
3300005535\|Ga0070684_100024516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5061	Open in IMG/M
3300005539\|Ga0068853_100453207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1207	Open in IMG/M
3300005539\|Ga0068853_100628619	Not Available	1021	Open in IMG/M
3300005539\|Ga0068853_100868848	Not Available	865	Open in IMG/M
3300005548\|Ga0070665_100055348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3979	Open in IMG/M
3300005563\|Ga0068855_100525129	Not Available	1284	Open in IMG/M
3300005577\|Ga0068857_100094526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2677	Open in IMG/M
3300005577\|Ga0068857_100432228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300005616\|Ga0068852_100078362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2923	Open in IMG/M
3300005841\|Ga0068863_100363102	Not Available	1412	Open in IMG/M
3300005949\|Ga0066791_10012696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1772	Open in IMG/M
3300006237\|Ga0097621_100013451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6100	Open in IMG/M
3300006358\|Ga0068871_101168092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	721	Open in IMG/M
3300009093\|Ga0105240_10124022	All Organisms → cellular organisms → Bacteria → Proteobacteria	3107	Open in IMG/M
3300009093\|Ga0105240_10328814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1740	Open in IMG/M
3300009093\|Ga0105240_10469411	Not Available	1405	Open in IMG/M
3300009098\|Ga0105245_10779201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium esperanzae	993	Open in IMG/M
3300009148\|Ga0105243_11571458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300009148\|Ga0105243_11814765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300009174\|Ga0105241_10187342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1720	Open in IMG/M
3300009174\|Ga0105241_11822082	Not Available	594	Open in IMG/M
3300009176\|Ga0105242_12952082	Not Available	526	Open in IMG/M
3300009545\|Ga0105237_11454391	Not Available	692	Open in IMG/M
3300009627\|Ga0116109_1135732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300009661\|Ga0105858_1031701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300009661\|Ga0105858_1287642	Not Available	512	Open in IMG/M
3300010371\|Ga0134125_10060836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4201	Open in IMG/M
3300010371\|Ga0134125_12715261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300010401\|Ga0134121_11318558	Not Available	728	Open in IMG/M
3300010403\|Ga0134123_12922679	Not Available	547	Open in IMG/M
3300010877\|Ga0126356_11020598	Not Available	817	Open in IMG/M
3300012987\|Ga0164307_11314506	Not Available	605	Open in IMG/M
3300013104\|Ga0157370_11090934	Not Available	721	Open in IMG/M
3300013105\|Ga0157369_11019322	Not Available	847	Open in IMG/M
3300013306\|Ga0163162_10026333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5748	Open in IMG/M
3300013306\|Ga0163162_10053781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4047	Open in IMG/M
3300013307\|Ga0157372_11387981	Not Available	810	Open in IMG/M
3300014322\|Ga0075355_1159263	Not Available	604	Open in IMG/M
3300014325\|Ga0163163_10797492	Not Available	1008	Open in IMG/M
3300014968\|Ga0157379_10000230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43712	Open in IMG/M
3300014968\|Ga0157379_10663047	Not Available	977	Open in IMG/M
3300014968\|Ga0157379_10834959	Not Available	871	Open in IMG/M
3300014969\|Ga0157376_11604902	Not Available	685	Open in IMG/M
3300015163\|Ga0167665_1035180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	970	Open in IMG/M
3300015265\|Ga0182005_1209359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300019890\|Ga0193728_1262691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300020021\|Ga0193726_1068662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1652	Open in IMG/M
3300020027\|Ga0193752_1095624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	1222	Open in IMG/M
3300020061\|Ga0193716_1014433	All Organisms → cellular organisms → Bacteria	4020	Open in IMG/M
3300021168\|Ga0210406_10385887	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300021168\|Ga0210406_10992601	Not Available	625	Open in IMG/M
3300021363\|Ga0193699_10180182	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300021406\|Ga0210386_11059294	Not Available	690	Open in IMG/M
3300021479\|Ga0210410_10624599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → Caulobacter vibrioides	956	Open in IMG/M
3300021559\|Ga0210409_10624657	Not Available	947	Open in IMG/M
3300025899\|Ga0207642_10027729	Not Available	2321	Open in IMG/M
3300025903\|Ga0207680_10244152	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300025909\|Ga0207705_10045131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3168	Open in IMG/M
3300025909\|Ga0207705_11443644	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300025911\|Ga0207654_11399912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300025912\|Ga0207707_10339774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1295	Open in IMG/M
3300025912\|Ga0207707_10427178	Not Available	1135	Open in IMG/M
3300025912\|Ga0207707_11390746	Not Available	560	Open in IMG/M
3300025913\|Ga0207695_10347768	Not Available	1370	Open in IMG/M
3300025919\|Ga0207657_10558304	Not Available	895	Open in IMG/M
3300025924\|Ga0207694_10682546	Not Available	866	Open in IMG/M
3300025928\|Ga0207700_10136859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2008	Open in IMG/M
3300025934\|Ga0207686_10161110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1572	Open in IMG/M
3300025937\|Ga0207669_10230220	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300025937\|Ga0207669_11795364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300025938\|Ga0207704_10057587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2388	Open in IMG/M
3300025938\|Ga0207704_10131829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1732	Open in IMG/M
3300025942\|Ga0207689_10543740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	975	Open in IMG/M
3300025944\|Ga0207661_11693518	Not Available	578	Open in IMG/M
3300025949\|Ga0207667_10023406	All Organisms → cellular organisms → Bacteria	6802	Open in IMG/M
3300025949\|Ga0207667_11187783	Not Available	743	Open in IMG/M
3300025981\|Ga0207640_11842717	Not Available	547	Open in IMG/M
3300026041\|Ga0207639_10405378	Not Available	1229	Open in IMG/M
3300026041\|Ga0207639_10709878	Not Available	933	Open in IMG/M
3300026078\|Ga0207702_10966856	Not Available	844	Open in IMG/M
3300026088\|Ga0207641_10882107	Not Available	888	Open in IMG/M
3300026116\|Ga0207674_10443172	Not Available	1255	Open in IMG/M
3300026116\|Ga0207674_10909402	Not Available	848	Open in IMG/M
3300026142\|Ga0207698_11534867	Not Available	681	Open in IMG/M
3300026216\|Ga0209903_1031927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	814	Open in IMG/M
3300026221\|Ga0209848_1079118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300028379\|Ga0268266_10223714	Not Available	1731	Open in IMG/M
3300028379\|Ga0268266_10410303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300028379\|Ga0268266_10784975	Not Available	920	Open in IMG/M
3300028800\|Ga0265338_10005502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16509	Open in IMG/M
3300028800\|Ga0265338_10939968	Not Available	587	Open in IMG/M
3300029984\|Ga0311332_10736487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300031235\|Ga0265330_10204124	Not Available	835	Open in IMG/M
3300031251\|Ga0265327_10423465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300031344\|Ga0265316_10520364	Not Available	848	Open in IMG/M
3300031595\|Ga0265313_10320774	Not Available	619	Open in IMG/M
3300031711\|Ga0265314_10710786	Not Available	507	Open in IMG/M
3300031715\|Ga0307476_10777000	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031726\|Ga0302321_100740805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300031902\|Ga0302322_101598582	Not Available	797	Open in IMG/M
3300033180\|Ga0307510_10448111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300033475\|Ga0310811_10623855	Not Available	1073	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	65.08%
Environmental	Environmental	34.92%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	65.08%
Terrestrial	Environmental → Terrestrial	34.13%
Aquatic	Environmental → Aquatic	0.79%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.89%
Soil	Environmental → Terrestrial → Soil	31.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.02%
Roots	Host-Associated → Plants → Roots	3.17%
Peat	Environmental → Terrestrial → Peat	2.38%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.22%
Soil	Host-Associated → Plants → Rhizosphere → Soil	21.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.46%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.38%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.38%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	12.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.38%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009627	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1001538854	3300004463	Arabidopsis Thaliana Rhizosphere	VTLHLVWIAMTILRFAGVIVLFAGVGLFGVYFIGGNARSKDGTVPRSSWLGAGPKQGMRLAGLGLLSLFAAYMLSLIMPDGT*
Ga0070658_100069446	3300005327	Corn Rhizosphere	MLHLAWVAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMPDGS*
Ga0070658_100863181	3300005327	Corn Rhizosphere	MTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA*
Ga0070683_1010851471	3300005329	Corn Rhizosphere	MTFLRFAGVIVVFSGVALFGVYFIGGNARVANGLVPRSSWLGAGPRRAMGIIALGALMLLGAFIIGLFMPNGA*
Ga0068869_1005184402	3300005334	Miscanthus Rhizosphere	MLHLSWIVMTVLRFAGVFVIFAGIALFGVYFIGGNARSTNGTVPRSSWLGAGPRKGMRIVVAGAILLGGAFLISLFMPDGS
Ga0068869_1007334301	3300005334	Miscanthus Rhizosphere	MLHLVWTVMTALRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT*
Ga0070680_1002046595	3300005336	Corn Rhizosphere	MSLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA*
Ga0070660_1006331451	3300005339	Corn Rhizosphere	MMLHLAWVAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMPDGS*
Ga0070661_1015522141	3300005344	Corn Rhizosphere	DLPAHRAQWPPLSLHLAWMAMTTLRFAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA*
Ga0070675_1010967851	3300005354	Miscanthus Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSADGAIPRSSWLGAGPKKGMKIFASGLLMLSAAFALSLFMPNGK*
Ga0070674_1003797473	3300005356	Miscanthus Rhizosphere	VTLHLLWIAMTVLRVAGAVVLIVGVGWFGLYFIAGNGRSQDGTVPRSSWLGAGPKQGMKIAGLGIVTLFVAFILSLIMPDGT*
Ga0070673_1006931642	3300005364	Switchgrass Rhizosphere	MMLHLVWTVMTALRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT*
Ga0070659_1013453761	3300005366	Corn Rhizosphere	RRMSLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGGVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA*
Ga0070713_1002151203	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GVALFGVYFIGGNARVANGAVPRSSWLGPGPRRAVRIIVLGASMLLGAFIIGLFMPNGM*
Ga0070710_110935052	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRAVRIIVLGASMLLGAFIIGLFMPNGM*
Ga0070663_1014156051	3300005455	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVGFSGVALFGVYFIGGNARVANGLVPRSSWLGAGPRKGMRIIALGALMLLGAF
Ga0070678_1004139973	3300005456	Miscanthus Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSADGAIPRSSWLGAGPKKGMKIFASGLLMLWAAFALSLFMPNGK*
Ga0070681_105246603	3300005458	Corn Rhizosphere	MTILRFAGVVVGFSGVALFGVYFIGGNARVANGEVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA*
Ga0070681_108180371	3300005458	Corn Rhizosphere	FSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA*
Ga0068867_1001171612	3300005459	Miscanthus Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSGDGAIPRSSWLGAGPKKGMKIFASGLLMLSAAFALSLFMPNGK*
Ga0070741_101472553	3300005529	Surface Soil	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAIPRSSWLGPGPIRAVRIIALGASMLLGAYIIGLFMPNGM*
Ga0070741_104050062	3300005529	Surface Soil	VAVVFSGVALFGVYFIGGNARVASGTVPRSSWLGAGPRTGMGIVALGALMLLGAFIIALFMPNGA*
Ga0070734_106995552	3300005533	Surface Soil	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPKRAVRIIALGASMLLGAFIIGLFMPNGA*
Ga0070684_1000245167	3300005535	Corn Rhizosphere	MTTLRFAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA*
Ga0068853_1004532074	3300005539	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGGVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA*
Ga0068853_1006286192	3300005539	Corn Rhizosphere	MTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLLGAFVIGLFMPNGA*
Ga0068853_1008688481	3300005539	Corn Rhizosphere	MAMTTLRFAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA*
Ga0070665_1000553482	3300005548	Switchgrass Rhizosphere	MILHFVWTVMTALRFAGVLVMFAGVALFGVYFIGGNARSNDGAVPRSAWLGAGPRKGMRIFAAGLLMVLAAYALSLFMPDGT*
Ga0068855_1005251293	3300005563	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA*
Ga0068857_1000945263	3300005577	Corn Rhizosphere	MTTLRFAGVAVVFSGVALFGVYFVGGNARVANGAVPRSSWLGPGPRKGMRIVALGVLMLLGAFIIGLFMPNGA*
Ga0068857_1004322281	3300005577	Corn Rhizosphere	FSGVALFGVYFIGGNARVANGGVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA*
Ga0068852_1000783625	3300005616	Corn Rhizosphere	MTILRFAGVVVVFSGVALFGVYFIGGNARVANGGVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA*
Ga0068863_1003631022	3300005841	Switchgrass Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSVDGAIPRSSWLGAGPKKGMKIFASGLLMLSAAFALSLFMPNGK*
Ga0066791_100126963	3300005949	Soil	MALLLHLAWILMTVLRFAGVFVVFAGVALFGVHFIGGNARASGGRVPLSSWLGAGPRKGIRIFAAGVLMLLGAFIIGLCMPNGT*
Ga0097621_1000134513	3300006237	Miscanthus Rhizosphere	MILHLGWMLMTVLRFSGVLVVFAGVALFGVYFIGGNARSKNGTVPRSSWLGAGPKQGMRISAWGLLMLAAAFVLSLIMPDGT*
Ga0068871_1011680921	3300006358	Miscanthus Rhizosphere	LKGCEKLALHFFWTVMTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTVAFLISLFLPNGS*
Ga0105240_101240222	3300009093	Corn Rhizosphere	MTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTVAFLISLFLPNGS*
Ga0105240_103288145	3300009093	Corn Rhizosphere	LSLHLAWIVMTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLLGAFVIGLFMPNGA*
Ga0105240_104694111	3300009093	Corn Rhizosphere	MTILRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPIRAVRIIALGASMLLGAFVIGLFMPDGM*
Ga0105245_107792012	3300009098	Miscanthus Rhizosphere	MILHLGWMLMTVLRFSGVLVVFAGVALFGVYFIGGNARSKNGTVPRSSWLGAGPKQGMRISAWGLLMLAAAFVLSLMMPDGT*
Ga0105243_115714581	3300009148	Miscanthus Rhizosphere	MTVLRFAGVFVIFAGIALFGVYFIGGNARSTNGTVPRSSWLGAGPRKGMRIVVAGAILLGGAFLISLFMPDGS*
Ga0105243_118147651	3300009148	Miscanthus Rhizosphere	AGQMMLHLVWTVMTALRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT*
Ga0105241_101873422	3300009174	Corn Rhizosphere	MTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTVALLISLFLPNGS*
Ga0105241_118220821	3300009174	Corn Rhizosphere	MTLHLAWIAMTVLRFAGVVVVFAGVGLFGIYFIGGNARSKNGNVPRSSWLGPGPKKAMRITGLGAVLLAGAFLIGRFMPNGL*
Ga0105242_129520821	3300009176	Miscanthus Rhizosphere	MSLTLHLAWVVMTFLRFGGVVVVFCGVALFGVYFIGGNARVANGAVPRSSWLGPGPRKGMQIIALGALMLLGAFIIRVLM
Ga0105237_114543912	3300009545	Corn Rhizosphere	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRKGMRIVALGVLMLLGAFIIGLFMPNGA*
Ga0116109_11357321	3300009627	Peatland	NFKFLSLGGLRLMPSLVLHFVWLAVTVLRFAGVAIVFAGVGLFGVYFIGGNARSSNGAVPASSWLGPGPRKGMKIVAFEALLLLGAFAIQFFLPDGT*
Ga0105858_10317013	3300009661	Permafrost Soil	MALLLHLAWIAMTVLRFAGVFVVFAGVALFGVYFIGGNARASGGRVPVSSWLGAGPRKGIRLFVAGVLMLLGAFVIGLLMPNGT*
Ga0105858_12876421	3300009661	Permafrost Soil	GVALFGVHFIGGNARASGGRVPLSSWLGAGPRKGIRIFAAGVLMLLGAFIIGLCMPNGT*
Ga0134125_100608364	3300010371	Terrestrial Soil	MSLTLHLAWVVMTFLRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRKGMQIIALGALMLLGAFIIRLFMPNGA*
Ga0134125_127152611	3300010371	Terrestrial Soil	KGCEKLALHFFWTVMTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTVALLISLFLPNGS*
Ga0134121_113185581	3300010401	Terrestrial Soil	MASASGWCFRKMTLHLAWIAMTVLRFAGVVVVFAGVGLFGIYFIGGNARSRNGNVPRSSWLGPGPKKAMRITGLGAVLLAGAFLIGRFMPNGL*
Ga0134123_129226791	3300010403	Terrestrial Soil	MMLHLVWTVMTALRFAGVLVMFAGVALFGVYFIGGNARSNDGAVPRSAWLGAGPRKGMRIFAAGLLMVLAAYALSLFMPDGT*
Ga0126356_110205981	3300010877	Boreal Forest Soil	MALLLHLAWIAMTVLRFAGVFVVFAGVALFGVYFIGGNARSSGGRIPISSWLGAGPRKGMRIFAAGALMLLGAF
Ga0164307_113145061	3300012987	Soil	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSADGAIPRSSWLGAGPTKGMKIFASALLMLSAAFALSLFMPNGK*
Ga0157370_110909341	3300013104	Corn Rhizosphere	MLRGTVHGNSPTHDNRRMSLTLHLAWIVMTILRFAGVVVVSSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIIALGILMLLGAFIIGLFMPNGA*
Ga0157369_110193222	3300013105	Corn Rhizosphere	WMAMTTLRFAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA*
Ga0163162_100263333	3300013306	Switchgrass Rhizosphere	MTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTIAFLISLFLPNGS*
Ga0163162_100537814	3300013306	Switchgrass Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSGDGAIPRSSWLGAGPKKGMKIFASGLLMLWAAFALSLFMPNGK*
Ga0157372_113879811	3300013307	Corn Rhizosphere	MTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRKGMRIVALGVLMLLGAFII
Ga0075355_11592631	3300014322	Natural And Restored Wetlands	LSLHLAWIVMTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLLGAFIIGLFMPNGA*
Ga0163163_107974922	3300014325	Switchgrass Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFIGGNARSGDGAIPRSSWLGAGPKKGMKIFASGLLMLSAAFALSLFMPNGK*
Ga0157379_100002308	3300014968	Switchgrass Rhizosphere	MTVLRLVGVVVLFFGVGLFGVYFIGGNARSRNGTVPRSSWLGPGPKKAMRISGLGAALLVVAFLISQFMPNGS*
Ga0157379_106630472	3300014968	Switchgrass Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFTGVGLFGVYFVGGNARSGDGAIPRSSWLGAGPKKGMKIFASGLLMLWAAFALSLFMPNGK*
Ga0157379_108349591	3300014968	Switchgrass Rhizosphere	MTVLRFAGVVVVFAGVGLFGIYFIGGNARSKNGNVPRSSWLGPGPKKAMRITGLGAVLLAGAFLIGRFMPNGL*
Ga0157376_116049021	3300014969	Miscanthus Rhizosphere	MILHLGWMLMTVLRFSGVLVVFAGVALFGVYFIGGNARSKNGTVPRSSWLGAGPKQGMRISAWGLLMLAAAFVLSLIMPDGT
Ga0167665_10351802	3300015163	Glacier Forefield Soil	MALYLAWLTMTALRFGGIIVVFAGVALFGVYFIGGNARAAQNSESAVPRSSWLGAGPRKGMRIAAVGALMLLGAYIISLLMPNGT*
Ga0182005_12093592	3300015265	Rhizosphere	VIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIIALGAILLTVAFLISLFMPNGS*
Ga0193728_12626911	3300019890	Soil	RMALILQLAWIVMTVLRFAGVIVVFSGVALFGVHFIAGNARARDGAIPRSSWLGAGPRKGMRIIALGALLLLGAFIIGRFMPNGA
Ga0193726_10686622	3300020021	Soil	MAMLLNLAWITMTVLRFAGVFVIFAGVALFGVYFIGGNARAPDGRVPLSSWLGAGPRKGIRIFAAGVLMLLGAFIIGLLMPNGT
Ga0193752_10956242	3300020027	Soil	MTVLRFAGVIVVFFGVALFGVHFIAGNARARNGAIPRSSWLGVGPRKGVRIIVLGALLLLGAFIIGRFMPNGA
Ga0193716_10144333	3300020061	Soil	MILLRFAGVIVAFAGVALFGVYFIAGNARAAREGGGAVPRSSWLGPGPRKAMWIFAGGVLMLLAAFLTGLLLPNGS
Ga0210406_103858874	3300021168	Soil	MTVLRFAGVFVVFAGVTLFGVYFIGGNARSSTGRVPVSSWLGAGPRKGIRIFAAGALMLLGA
Ga0210406_109926012	3300021168	Soil	VVFAGVTLFGVYFIGGNARSSTGRVPVSSWLGAGPRKGIRIFAAGALMLLGAFIIGLFMPNGT
Ga0193699_101801822	3300021363	Soil	MLHLAWTVMTALRFAGVIVVFAGVGLFGVYFIAGNGRSKNGVIPRSSWLGMGPRKGMRISALGLLLLAAASVLSLVMPDGT
Ga0210386_110592942	3300021406	Soil	MMTVLRFAGVATVFAGVGLFGIYFIGGNARATDGAVPKSSWLASGPRKGMRIVVFGALMLLCAFIIGLFMPDGI
Ga0210410_106245991	3300021479	Soil	MTVLRFAGVFVVFAGVTLFGVYFIGGNARSSTGRVPVSSWLGAGPRKGIRIFAAGALMLLGAFIIGLFMPNGT
Ga0210409_106246574	3300021559	Soil	MALLLHLAWIAMTVLRFAGVFVVFAGIALFGVYFIGGNARSRGGRVPLSSWLGAGPRKGIRIFAAGALMLLGAFIIGLFMPNGT
Ga0207642_100277294	3300025899	Miscanthus Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSADGAIPRSSWLGAGPKKGMKIFASGLLMLWAAFALSLFMPNGK
Ga0207680_102441522	3300025903	Switchgrass Rhizosphere	MLHLAWVAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMPDGS
Ga0207705_100451311	3300025909	Corn Rhizosphere	LHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA
Ga0207705_114436441	3300025909	Corn Rhizosphere	VAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMPDGS
Ga0207654_113999121	3300025911	Corn Rhizosphere	MTVLRFAGVFVIFAGIALFGVYFIGGNARSTNGTVPRSSWLGAGPRKGMRIVVAGAILLGGAFLISLFMPDGS
Ga0207707_103397742	3300025912	Corn Rhizosphere	FAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA
Ga0207707_104271783	3300025912	Corn Rhizosphere	MTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA
Ga0207707_113907461	3300025912	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVGFSGVALFGVYFIGGNARVANGEVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA
Ga0207695_103477681	3300025913	Corn Rhizosphere	MTILRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPIRAVRIIALGASMLLGAYIIGLFMPNGM
Ga0207657_105583042	3300025919	Corn Rhizosphere	MMLHLAWVAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMPDGS
Ga0207649_112888282	3300025920	Corn Rhizosphere	AGGPVQDDLPAHRAQWPPLSLHLAWMAMTTLRFAGVAVVFSGVALFGVYFVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA
Ga0207694_106825462	3300025924	Corn Rhizosphere	MTFLRFAGVVVVFSGVALFGVYFIGGNARVANGLVPRSSWLGAGPRRAMGIIALGALMLLGAFIIGLFMPNGA
Ga0207700_101368594	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GVALFGVYFIGGNARVANGAVPRSSWLGPGPRRAVRIIVLGASMLLGAFIIGLFMPNGM
Ga0207686_101611101	3300025934	Miscanthus Rhizosphere	MMLHLVWTVMTALRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT
Ga0207669_102302202	3300025937	Miscanthus Rhizosphere	MTVLRVAGAVVLIVGVGWFGLYFIAGNGRSQDGTVPRSSWLGAGPKQGMKIAGLGIVTLFVAFILSLIMPDGT
Ga0207669_117953641	3300025937	Miscanthus Rhizosphere	LRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT
Ga0207704_100575875	3300025938	Miscanthus Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSADGAIPRSSWLGAGPKKGMKIFASGLLMLWAAFALSLFMPN
Ga0207704_101318293	3300025938	Miscanthus Rhizosphere	MLHLVWTVMTALRFSGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSAAFALSFFMPDGT
Ga0207689_105437401	3300025942	Miscanthus Rhizosphere	MTVLRFAGVFVIFAGIALFGVYFIGGNARSTNGTVPRSSWLGAGPRKGMRIVVAGAILLGGAFLI
Ga0207661_116935181	3300025944	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVGFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA
Ga0207667_100234066	3300025949	Corn Rhizosphere	MTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLLGAFVIGLFMPNGA
Ga0207667_111877833	3300025949	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGGVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA
Ga0207640_118427171	3300025981	Corn Rhizosphere	MPLTLHLAWIAMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIAALGILMLLGAFIIGLFMPNGA
Ga0207639_104053782	3300026041	Corn Rhizosphere	MTTLRFAGVAVVFSGVALFCVYYVGGNARVASGAVPRSSWLGPGPRTGMGIVALGALMLLGALIIGLFMPNGA
Ga0207639_107098781	3300026041	Corn Rhizosphere	MLHLAWVAMTVLRFAGVIMMFAGVGLFGVYFIAANARSKNGAIPRAAWLGPGPKKGLRLCAIGLAMLGCAFALSFVMHD
Ga0207702_109668562	3300026078	Corn Rhizosphere	MTFLRFAGVAVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRAVCIIVLGASMLLGAFVIGLFMPDGM
Ga0207641_108821072	3300026088	Switchgrass Rhizosphere	MTLHLVWIAMTVLRFAGVAVMFAGVGLFGVYFVGGNARSGDGAIPRSSWLGAGPKKGMKIFASGLLMLSAAFALSLFMPNGK
Ga0207674_104431724	3300026116	Corn Rhizosphere	RFAGVVVVFSGVALFGVYFIGGNARVANGGVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA
Ga0207674_109094021	3300026116	Corn Rhizosphere	MTTLRFAGVAVVFSGVALFGVYFVGGNARVANGAVPRSSWLGPGPRKGMRIVALGVLMLLGAFIIGLFMPNGA
Ga0207698_115348672	3300026142	Corn Rhizosphere	AGVVVGFSGVALFGVYFIGGNARVANGEVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA
Ga0209903_10319272	3300026216	Soil	MALLLHLAWILMTVLRFAGVFVVFAGVALFGVHFIGGNARASGGRVPLSSWLGAGPRKGIRIFAAGVLMLLGAFIIGLCMPNGT
Ga0209848_10791181	3300026221	Permafrost Soil	GVYFIGGNARASGGRVPVSSWLGAGPRKGIRLFVAGVLMLLGAFFVGLLLPNGT
Ga0268266_102237142	3300028379	Switchgrass Rhizosphere	MILHFVWTVMTALRFAGVLVMFAGVALFGVYFIGGNARSNDGAVPRSAWLGAGPRKGMRIFAAGLLMVLAAYALSLFMPDGT
Ga0268266_104103032	3300028379	Switchgrass Rhizosphere	MTALRFAGVIVIFAGVGLFGLHFIQGNGRSTNGSIPRSSWLGAGPRKGMRIVALGAILLTVAFLISLFLPNGS
Ga0268266_107849752	3300028379	Switchgrass Rhizosphere	MTVLRFAGVVVVFAGVGLFGIYFIGGNARSKNGNVPRSSWLGPGPKKAMRITGLGAVLLAGAFLIGRFMPNGL
Ga0265338_1000550216	3300028800	Rhizosphere	MTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIIALGILMLLCAFIIGLFMPNGA
Ga0265338_109399682	3300028800	Rhizosphere	MTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLL
Ga0311332_107364872	3300029984	Fen	MLLRSAFIVMTVLRFAGVFVVFAGVALFGVYFIGGNAHAARTPGGAIPTSSWRGAGPRKGLRIIVLGALMLLGAFLIKLMMPNGA
Ga0265330_102041241	3300031235	Rhizosphere	HLAWIVMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIIALGILMLLCAFIIGLFMPNGA
Ga0265327_104234652	3300031251	Rhizosphere	MTLLLHLAWILVTVLRFAGVFALFAGVTLFGVYFIAGNARAARSGDGAVPLSSWLGPGPRKGIRIFAVGVLMLVGAFLIGLLMPNGG
Ga0265316_105203642	3300031344	Rhizosphere	LHLAWIVMTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIIALGILMLLCAFIIGLFMPNGA
Ga0265313_103207742	3300031595	Rhizosphere	MTILRFAGVVVVFSGVALFGVYFIGGNARVANGAVPRSSWLGPGPRRGMRIIALGILMLL
Ga0265314_107107861	3300031711	Rhizosphere	MTFLRFAGVAAVFSGVALFGVYFIGGNARVANGAVPRSSWLGAGPRRGMGIIALGGLMLLGAF
Ga0307476_107770001	3300031715	Hardwood Forest Soil	FGYYFIAGNAQASDGAVPRSSWLGAGPQQGMRIVAMGAFMLLGAFIIELFMPNGN
Ga0302321_1007408053	3300031726	Fen	DRGKACYSRDMDMLLRLAFIVMTVLRFAGVFVIFAGVALFGVYFIGGNARAARTPGGAIPTSSWRGAGPRKGLRIIALGALMLLGAFLIKLMMPNGA
Ga0302322_1015985821	3300031902	Fen	SHNVPDRGKACYSRDMDMLLRSAFIVMTVLRFAGVFVVFAGVALFGVYFIGGNAHAARTPGGAIPTSSWRGAGPRKGLRIIVLGALMLLGAFLIKLMMPNGA
Ga0307510_104481113	3300033180	Ectomycorrhiza	FAGVLVMFAGVGLFGVYFIGGNARSRNGAVPRSSWLGAGPRKGMRIFALGLLMVSSAFALSFFMPDGR
Ga0310811_106238552	3300033475	Soil	GTVHDNSPTDDNRRMPLTLHLAWIAMTILRFAGVVVGFSGVALFGVYFIGGNARVANGEVPRSSWLGPGPKRGMRIIALGVLMLLGAFIIGLFMPNGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences