Metagenome Family F066877

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066877
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	106 residues
Representative Sequence	PRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Number of Associated Samples	113
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	80.95 %
% of genes from short scaffolds (< 2000 bps)	70.63 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.492 % of family members)
Environment Ontology (ENVO)	Unclassified (36.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.730 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.46% β-sheet: 8.74% Coil/Unstructured: 39.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF04072	LCM	50.79
PF01425	Amidase	3.17
PF01230	HIT	3.17
PF02585	PIG-L	0.79
PF00106	adh_short	0.79
PF06983	3-dmu-9_3-mt	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	50.79
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	3.17
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.79
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.79
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.65 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	26.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	14.29 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	26.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	26.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	26.98 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Acetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	26.98 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Acetobacter pasteurianus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	26.98 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Acetobacter pasteurianus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	26.98 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.59 %
Acetobacter pasteurianus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11000014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	993	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104797012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	732	Open in IMG/M
3300000559\|F14TC_100027509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1351	Open in IMG/M
3300002121\|C687J26615_10194824	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300002126\|JGI24035J26624_1017639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300004114\|Ga0062593_103515431	Not Available	503	Open in IMG/M
3300004156\|Ga0062589_100715740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	891	Open in IMG/M
3300004156\|Ga0062589_102437396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300004157\|Ga0062590_100927763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	818	Open in IMG/M
3300004480\|Ga0062592_102162364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	553	Open in IMG/M
3300004643\|Ga0062591_100620238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	960	Open in IMG/M
3300005093\|Ga0062594_100717881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	906	Open in IMG/M
3300005206\|Ga0068995_10113704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acetobacter → Acetobacter pasteurianus	562	Open in IMG/M
3300005288\|Ga0065714_10208618	Not Available	873	Open in IMG/M
3300005331\|Ga0070670_100041057	All Organisms → cellular organisms → Bacteria	3976	Open in IMG/M
3300005336\|Ga0070680_101324149	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005338\|Ga0068868_102294959	Not Available	515	Open in IMG/M
3300005340\|Ga0070689_100070003	All Organisms → cellular organisms → Bacteria	2738	Open in IMG/M
3300005341\|Ga0070691_10105766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1402	Open in IMG/M
3300005341\|Ga0070691_10996564	Not Available	522	Open in IMG/M
3300005343\|Ga0070687_100107694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1572	Open in IMG/M
3300005441\|Ga0070700_100295921	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005455\|Ga0070663_100474980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1034	Open in IMG/M
3300005456\|Ga0070678_100293323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1380	Open in IMG/M
3300005459\|Ga0068867_100879657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	805	Open in IMG/M
3300005578\|Ga0068854_101928092	Not Available	543	Open in IMG/M
3300005617\|Ga0068859_100639721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1156	Open in IMG/M
3300005618\|Ga0068864_100922876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	863	Open in IMG/M
3300005836\|Ga0074470_10327430	Not Available	522	Open in IMG/M
3300005840\|Ga0068870_10185258	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300006237\|Ga0097621_100571913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1030	Open in IMG/M
3300006845\|Ga0075421_100970480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	964	Open in IMG/M
3300006846\|Ga0075430_100376204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1172	Open in IMG/M
3300006853\|Ga0075420_101789397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	526	Open in IMG/M
3300006876\|Ga0079217_11003963	Not Available	610	Open in IMG/M
3300006969\|Ga0075419_10016029	All Organisms → cellular organisms → Bacteria	4617	Open in IMG/M
3300009094\|Ga0111539_11201385	Not Available	881	Open in IMG/M
3300009100\|Ga0075418_10125629	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300009147\|Ga0114129_12594025	Not Available	605	Open in IMG/M
3300009148\|Ga0105243_11863585	Not Available	634	Open in IMG/M
3300009177\|Ga0105248_11120418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	890	Open in IMG/M
3300010397\|Ga0134124_10105588	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300010403\|Ga0134123_11497130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	719	Open in IMG/M
3300012474\|Ga0157356_1020049	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300012485\|Ga0157325_1017225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	609	Open in IMG/M
3300012497\|Ga0157319_1051409	All Organisms → cellular organisms → Bacteria → Terrabacteria group	513	Open in IMG/M
3300012508\|Ga0157315_1058929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	536	Open in IMG/M
3300012891\|Ga0157305_10131001	Not Available	654	Open in IMG/M
3300012898\|Ga0157293_10337250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	512	Open in IMG/M
3300012899\|Ga0157299_10206316	Not Available	596	Open in IMG/M
3300012906\|Ga0157295_10032038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1143	Open in IMG/M
3300012907\|Ga0157283_10063667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	888	Open in IMG/M
3300013100\|Ga0157373_10778026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	705	Open in IMG/M
3300013297\|Ga0157378_11016456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	864	Open in IMG/M
3300015371\|Ga0132258_10138085	All Organisms → cellular organisms → Bacteria	5826	Open in IMG/M
3300015372\|Ga0132256_100891754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1005	Open in IMG/M
3300015374\|Ga0132255_100930976	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300015374\|Ga0132255_101102253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1193	Open in IMG/M
3300017965\|Ga0190266_11097328	Not Available	542	Open in IMG/M
3300018081\|Ga0184625_10628662	Not Available	523	Open in IMG/M
3300018083\|Ga0184628_10254799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	922	Open in IMG/M
3300018476\|Ga0190274_10092205	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300018476\|Ga0190274_10248394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1611	Open in IMG/M
3300018481\|Ga0190271_10150429	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300019361\|Ga0173482_10341622	Not Available	675	Open in IMG/M
3300021082\|Ga0210380_10049969	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300025159\|Ga0209619_10353071	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300025893\|Ga0207682_10025785	All Organisms → cellular organisms → Bacteria → Proteobacteria	2332	Open in IMG/M
3300025903\|Ga0207680_11300628	Not Available	517	Open in IMG/M
3300025904\|Ga0207647_10695766	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300025917\|Ga0207660_11164472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	628	Open in IMG/M
3300025918\|Ga0207662_10329969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1020	Open in IMG/M
3300025926\|Ga0207659_10378986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1179	Open in IMG/M
3300025940\|Ga0207691_10303910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1370	Open in IMG/M
3300025941\|Ga0207711_11110291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	732	Open in IMG/M
3300025942\|Ga0207689_10060075	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300025961\|Ga0207712_11351682	Not Available	637	Open in IMG/M
3300025981\|Ga0207640_10216897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1462	Open in IMG/M
3300026023\|Ga0207677_12165267	Not Available	517	Open in IMG/M
3300026067\|Ga0207678_10521073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1037	Open in IMG/M
3300026088\|Ga0207641_10163471	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300026089\|Ga0207648_10087405	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300026089\|Ga0207648_10694474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	943	Open in IMG/M
3300026089\|Ga0207648_10741023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	912	Open in IMG/M
3300026089\|Ga0207648_11680551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	596	Open in IMG/M
3300026095\|Ga0207676_10315355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1433	Open in IMG/M
3300027880\|Ga0209481_10029523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2473	Open in IMG/M
3300027909\|Ga0209382_11008943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	867	Open in IMG/M
3300027993\|Ga0247749_1049243	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	514	Open in IMG/M
3300028381\|Ga0268264_10090339	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300028381\|Ga0268264_11381571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	715	Open in IMG/M
3300028587\|Ga0247828_10655007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	648	Open in IMG/M
3300028597\|Ga0247820_10828174	Not Available	652	Open in IMG/M
3300031198\|Ga0307500_10110928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	747	Open in IMG/M
3300031538\|Ga0310888_10127429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1331	Open in IMG/M
3300031547\|Ga0310887_10494051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	736	Open in IMG/M
3300031547\|Ga0310887_11117415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	506	Open in IMG/M
3300031562\|Ga0310886_10116137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1359	Open in IMG/M
3300031740\|Ga0307468_100531146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	942	Open in IMG/M
3300031913\|Ga0310891_10062640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1069	Open in IMG/M
3300031940\|Ga0310901_10004318	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300032002\|Ga0307416_102598585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	604	Open in IMG/M
3300032157\|Ga0315912_11419954	Not Available	547	Open in IMG/M
3300032211\|Ga0310896_10093631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1329	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.38%
Host-Associated	Host-Associated	47.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.41%
Plants	Host-Associated → Plants	47.62%
Aquatic	Environmental → Aquatic	3.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.02%
Sediment	Environmental → Aquatic → Sediment	2.38%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Marine	Environmental → Aquatic → Marine	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.79%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_110000142	3300000363	Soil	VTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
INPhiseqgaiiFebDRAFT_1047970122	3300000364	Soil	YSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLIYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
F14TC_1000275091	3300000559	Soil	YDASRGAYVPDTPRYASHYRDQLAGALEEAQTWLSESGGKDLGLDKCRLLRPALGLMYSGRFHDGLILIRGLYHGADRNQFESETIDKIRQSPLWVER*
JGI24750J21931_10303222	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	ADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
C687J26615_101948242	3300002121	Soil	PRYAGRFRDELASALESAQTWMSASGGKDTGLDKCRLLPAVLGLMYSGRMEDGLVLIRGLYRGKDREQFERETVEMVRQSPRWVAR*
JGI24035J26624_10176392	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	GTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
JGI24036J26619_100848323	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	PGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPXRGSYVLETPHFASSYRDQLAXALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0062593_1035154312	3300004114	Soil	DSPFPRVIYSYDSSREAYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0062589_1007157402	3300004156	Soil	RGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0062589_1024373961	3300004156	Soil	NGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0062590_1009277632	3300004157	Soil	WLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0062592_1021623642	3300004480	Soil	SHYRDQLATALDEAQIWMSESGGKDLGLDKCRLLHPALGLMYGGRFTDGLALLRGLYRGVDREDFERETIEKVRSSPLWVER*
Ga0062591_1006202382	3300004643	Soil	RYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0062594_1007178812	3300005093	Soil	RGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0068995_101137041	3300005206	Natural And Restored Wetlands	LEFVTCDDGWAYTYCSFADSPLPRVVYAYDSVRGEYGPATPRFASRFRDELAAALDDAQAWMSESIGKDIGLDKCRLLRPVLGLMFAGRIDDGLVLIRGLYRGADREVFEKETVERVRQSPQWVPR*
Ga0065714_102086181	3300005288	Miscanthus Rhizosphere	DSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0070676_111509051	3300005328	Miscanthus Rhizosphere	CYSSGVYSVGEDVRPVLALTTGNCGPGEYEDLDGNGTREFVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0070670_1000410574	3300005331	Switchgrass Rhizosphere	DRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0066388_1028227762	3300005332	Tropical Forest Soil	GEDVRAILVLETGNCGPGEFADLDGNGTKEFVTCDDRWVYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDLGLDKCRLLRPMLGLMYGGHFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVER*
Ga0070680_1013241491	3300005336	Corn Rhizosphere	SPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0068868_1022949592	3300005338	Miscanthus Rhizosphere	SRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0070689_1000700031	3300005340	Switchgrass Rhizosphere	WLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0070691_101057662	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	YRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0070691_109965641	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0070687_1001076942	3300005343	Switchgrass Rhizosphere	DDRWAYNYCSFADSPFPRVIYSYDPARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0070700_1002959212	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	REFVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0070663_1004749801	3300005455	Corn Rhizosphere	YDPARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0070678_1002933231	3300005456	Miscanthus Rhizosphere	SESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0068867_1008796572	3300005459	Miscanthus Rhizosphere	RGVYVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFSDGIVLMRALYRGGDRDEFERDTVERVRQSPFWVR*
Ga0070672_1019053382	3300005543	Miscanthus Rhizosphere	EDLDGNGTREFVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0068854_1019280921	3300005578	Corn Rhizosphere	YVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFSDGIVLMRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0068859_1006397211	3300005617	Switchgrass Rhizosphere	EFVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0068864_1009228761	3300005618	Switchgrass Rhizosphere	ARGVYVVDTPRFASHFREQLAGALNEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0074470_103274301	3300005836	Sediment (Intertidal)	YREELAEALDDAQTRLSESRGLNAGLDKCRLLRPALGLMYSGRLHDGVVLIHSLYRGGDRDEFERDTVERVRQSPLWVER*
Ga0068870_101852581	3300005840	Miscanthus Rhizosphere	SESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPFWVR*
Ga0097621_1005719132	3300006237	Miscanthus Rhizosphere	ALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0075421_1009704801	3300006845	Populus Rhizosphere	ADSPLPRVVYSYDATRGIYAVDTPRFASRYREELANALDEAQTWLSESRGQDAGLDKCHLLKPVLGLMYSGRLQDGIVLIRGLYRGIDRDEFERDTTERVRKSPLWVER*
Ga0075430_1003762042	3300006846	Populus Rhizosphere	DSPFPRVIYSYDSARGMYVPDTPRYASRYRDQLAEALDNAQTWLSESGGQDPGLDKCRLLRPALGLMYAGRFDDGLLLIRGLYRGADREQFERETVEKVRTSPLWVERERRLRR*
Ga0075420_1017893971	3300006853	Populus Rhizosphere	PRFANHYRDRLATALDDAQIWISESGGKDLGLDKCRLLQPALGLMYAGRFTDGLALIRGLYRGADREDFERETIEKVRGSPLWIER*
Ga0079217_110039632	3300006876	Agricultural Soil	GSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAEALDEAQTWLSESGGHNVGLDKCRLLRPVLGLMYSGRFNDGIVLIRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0068865_1002510542	3300006881	Miscanthus Rhizosphere	SMAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0075419_100160291	3300006969	Populus Rhizosphere	CSFADSPFPRVVYSYDPTRGSYVLETPRFANRYRDQLATALDEAQTWMSESGGRDLGLDKCRLLRPTLGLMYGGRFSDGLALIRGLYHGADREDFQRETIEKVRSSPLWVER*
Ga0111539_112013851	3300009094	Populus Rhizosphere	YCSFADSPFPRVIYSYDSARGVYVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0075418_101256291	3300009100	Populus Rhizosphere	TWLSESGGQDPGLDKCRLLRPALGLMYAGRFDDGLLLIRGLYRGADREQFERETVEKVRTSPLWVERERRLQR*
Ga0114129_125940252	3300009147	Populus Rhizosphere	CDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAEALDEAQTWLSESGGHNVGLDKCRLLRPVLGLMYSGRFNAGIVLIRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0105243_118635851	3300009148	Miscanthus Rhizosphere	PFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGQDAGLDKCRLLRPVLGLMYSGRFQDGLVLIRALYRGGDRDEFERDTVERVRQSPFWVR*
Ga0105242_116247281	3300009176	Miscanthus Rhizosphere	DGTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFRGQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVRLPLANSVRHTRRANEERAGHPRDRAAARSA*
Ga0105248_111204182	3300009177	Switchgrass Rhizosphere	ADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0134128_119327082	3300010373	Terrestrial Soil	TGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0134124_101055883	3300010397	Terrestrial Soil	ALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0134122_103526311	3300010400	Terrestrial Soil	RPVLALTTGNCGPGEYEDLDGNGTREFVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0134123_114971302	3300010403	Terrestrial Soil	DQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0157356_10200491	3300012474	Unplanted Soil	YSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157333_10254141	3300012484	Soil	MAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157325_10172252	3300012485	Arabidopsis Rhizosphere	PHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157319_10514091	3300012497	Arabidopsis Rhizosphere	RGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRLSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157315_10589292	3300012508	Arabidopsis Rhizosphere	YVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157305_101310012	3300012891	Soil	EALDEAQTWLSELGGHDVGLDKCRLLRPVLGLMYSGRFNDGIVLIRALYRGGDRDEFERDTVERVRQSPFWVR*
Ga0157293_103372502	3300012898	Soil	YSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0157299_101033372	3300012899	Soil	MAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157299_102063161	3300012899	Soil	IYSYDSSRGVYVVDTPRFASHFREQLAGALNEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0157295_100320382	3300012906	Soil	FVTCDDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER*
Ga0157283_100636672	3300012907	Soil	LAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0157298_100881632	3300012913	Soil	YSMAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGVALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157373_107780262	3300013100	Corn Rhizosphere	FPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSSRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0157378_110164561	3300013297	Miscanthus Rhizosphere	EALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0132258_101380856	3300015371	Arabidopsis Rhizosphere	MYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0132256_1008917541	3300015372	Arabidopsis Rhizosphere	REFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR*
Ga0132255_1009309761	3300015374	Arabidopsis Rhizosphere	DSPFPRVIYSYDSARGVYVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPFWVR*
Ga0132255_1011022531	3300015374	Arabidopsis Rhizosphere	TKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH*
Ga0190266_106516461	3300017965	Soil	SSGVYSVGEEVKPVLALATGNCGPGELEDLDGNGTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0190266_110973281	3300017965	Soil	DTPRFASHFREQLAGALEEAQTWLSESGGLDLGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0184625_106286622	3300018081	Groundwater Sediment	EQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0184628_102547992	3300018083	Groundwater Sediment	REQLAEALDQAQTWLSESGGQDAGLDKCRLLRPVLGLMYSGRFQDGLVLIRALYRGGDRDEFERDTVERVRKSPFWVER
Ga0190274_100922051	3300018476	Soil	LAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFQDGLVLIRALYRGGDRDEFERDTVERVRKSPFWVER
Ga0190274_102483942	3300018476	Soil	SFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0190271_101504293	3300018481	Soil	YVVDTPRFASHFRDQLAGALDEAQTWLSESGGRDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0173482_103416222	3300019361	Soil	FANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALNEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0173479_105789661	3300019362	Soil	PILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0210380_100499693	3300021082	Groundwater Sediment	FASHFREQLAEALDQAQTWLSESGGQDAGLDKCRLLRPVLGLMYSGRFQDGLVLIRALYRGGDRDEFERDTVERVRKSPFWVER
Ga0209619_103530712	3300025159	Soil	TFADSPFPRVVYAYNALRGDYAAATPRYAGRFRDELASALESAQTWMSASGGKDTGLDKCRLLPAVLGLMYSGRMEDGLVLIRGLYRGKDREQFERETVEMVRQSPRWVAR
Ga0207673_10035823	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	CYSMAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207682_100257853	3300025893	Miscanthus Rhizosphere	FASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFSDGIVLMRALYRGGDRDEFERDTVERVRQSPFWVR
Ga0207680_113006281	3300025903	Switchgrass Rhizosphere	DGDGTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0207647_106957662	3300025904	Corn Rhizosphere	SPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207660_111644721	3300025917	Corn Rhizosphere	SPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER
Ga0207662_103299692	3300025918	Switchgrass Rhizosphere	EFITCDDRWAYNYCSFADSPFPRVIYSYDPARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207659_103789861	3300025926	Miscanthus Rhizosphere	AQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER
Ga0207691_103039101	3300025940	Miscanthus Rhizosphere	DSSRGIYVLDTPRFASRFREELAQALDEAQTWLSESRGQDAGLDKCRLLRPALGLMYSGRLHDGVVLIRGLYRGSDRDEFERDTVERVRQSPLWVER
Ga0207711_111102912	3300025941	Switchgrass Rhizosphere	ADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0207689_100600751	3300025942	Miscanthus Rhizosphere	DDRWANMYCSFADSPFPRVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER
Ga0207712_113516821	3300025961	Switchgrass Rhizosphere	RFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0207640_102168972	3300025981	Corn Rhizosphere	GALEEAQNCMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207677_121652672	3300026023	Miscanthus Rhizosphere	VYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0207678_105210732	3300026067	Corn Rhizosphere	PARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207641_101634711	3300026088	Switchgrass Rhizosphere	NGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPARGSYVLETPHFASSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207648_100874051	3300026089	Miscanthus Rhizosphere	QLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0207648_106944741	3300026089	Miscanthus Rhizosphere	SYDSARGVYVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFSDGIVLMRALYRGGDRDEFERDTVERVRQSPFWVR
Ga0207648_107410232	3300026089	Miscanthus Rhizosphere	SSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYAGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0207648_116805511	3300026089	Miscanthus Rhizosphere	MYVVDTPRFASHYRDQLATALDEAQNWMSESGGKDLGLDKCRLLHPALGLMYGGRFTDGMALLRGLYRGVDREDFERETIEKVRSSPLWVER
Ga0207676_103153552	3300026095	Switchgrass Rhizosphere	SPFPRVIYSYDSARGVYVVDTPRFASHFRGQLAEALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0209481_100295231	3300027880	Populus Rhizosphere	ADSPFPRVVYSYDPTRGSYVLETPRFANRYRDQLATALDEAQTWMSESGGRDLGLDKCRLLRPTLGLMYGGRFSDGLALIRGLYHGADREDFQRETIEKVRSSPLWVER
Ga0209481_103911082	3300027880	Populus Rhizosphere	LDGNGTREFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0209382_110089432	3300027909	Populus Rhizosphere	LDEAQTWLSESRGQDAGLDKCHLLKPVLGLMYSGRLQDGIVLIRGLYRGIDRDEFERDTTERVRKSPLWVER
Ga0247749_10492431	3300027993	Soil	RVVYSYDASRGMYVPDTPRFASRYRDQLAAALDEAQAWLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER
Ga0268264_100903391	3300028381	Switchgrass Rhizosphere	SSYRDQLAAALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0268264_113815712	3300028381	Switchgrass Rhizosphere	REQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0247828_106550072	3300028587	Soil	QLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0247820_108281741	3300028597	Soil	FANIYCSFADSPFPRVIYSYDSARGVYVVDTPRFASHFREQLAEALDEAQTWLSESGGHDVGLDKCRLLRPVLGLMYSGRFNDGIVLIRALYRGGDRDEFERDTVERVRQSPFWVR
Ga0247820_109609001	3300028597	Soil	TGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRKSPLWVEH
Ga0247819_103424082	3300028608	Soil	GELEDLDGNGTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0247827_103602362	3300028889	Soil	SMAVYSVGEDVRPILVLETGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0307500_101109281	3300031198	Soil	CTFAESPLPRVIYSYDPSRGMYVLDTPRFASRYREELAEALDEAQTWLSESRGQDAGLDKCRLLRPALGLMYSGRLHDGIVLIRGLYRGSDRDEFERDTVERVRQSPLWVER
Ga0310888_101274291	3300031538	Soil	GTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0310887_104940512	3300031547	Soil	KVIYSYDPSRGMYVVDTPRFASHYRDQLATALDEAQNWMSESGGKDLGLDKCRLLHPALGLMYGGRFTDGMALLRGLYRGVDREDFERETIEKVRSSPLWVER
Ga0310887_111174152	3300031547	Soil	WLSESGGQDPGLDKCRLLRPALGLMYAGRFQDGVVLIRALYRGGDRDEFERDTIERVRKSPMWIER
Ga0310886_101161371	3300031562	Soil	RFASHYRDQLATALDEAQNWMSESGGKDLGLDKCRLLHPALGLMYGGRFTDGLALIRGLYRGVDREDFERETIEKVRSSPLWVER
Ga0307468_1005311461	3300031740	Hardwood Forest Soil	TWLSESGGRDAGLDKCRLLRPVLGLMYSGRFQDGLVLIRALYRGGDRDEFERDTIERVRQSPFWVER
Ga0310891_100626401	3300031913	Soil	HFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0310901_100043183	3300031940	Soil	PRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0310885_101254791	3300031943	Soil	SSGVYSIGEEVKPVLALATGNCGPGELEDLDGNGTREFVVCDDRFANMYCSFADSPFPRVIYSYDSSRGVYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0310884_100005159	3300031944	Soil	ILVLATGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH
Ga0307416_1025985851	3300032002	Rhizosphere	PRYASHYRDQLSAALAEAQTWLAESGGRDPGIDKCRLLRPALGLMYSGRFDDGLVLIRSLYHGADREQFAHETAERVRTSPMWVEK
Ga0315912_114199541	3300032157	Soil	SSRGVYVVDTPRFASHFRQQLAEALDEAQTWLSESGGHDVGLDKCRLLRPVLGLMYSGRFNDGVVLIRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0310896_100936312	3300032211	Soil	VYVVDTPRFASHFREQLAGALDEAQTWLSESGGLDVGLDKCRLLRPVLGLMYSGRFNDGVVLLRALYRGGDRDEFERDTVERVRQSPLWVR
Ga0373958_0225849_32_472	3300034819	Rhizosphere Soil	VLATGNCGPGEFADLDGNGTKEFITCDDRWAYNYCSFADSPFPRVIYSYDPTRGSYVLETPHFASSYRDQLAGALEEAQNWMSESSGRDIGLDKCRLLRPMLGLMYGGRFSDGLALLRGLYRGADRADFERETVEKVRTSPLWVEH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066877

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences