Metagenome Family F066867

Basic Information
Family ID	F066867
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	123 residues
Representative Sequence	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIS
Number of Associated Samples	112
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.83 %
% of genes near scaffold ends (potentially truncated)	39.68 %
% of genes from short scaffolds (< 2000 bps)	82.54 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Most Common Taxonomy
Group	Unclassified (52.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 1.99% β-sheet: 41.06% Coil/Unstructured: 56.95%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00027	cNMP_binding	9.52
PF04828	GFA	6.35
PF07883	Cupin_2	5.56
PF05534	HicB	3.17
PF01323	DSBA	1.59
PF01471	PG_binding_1	1.59
PF13581	HATPase_c_2	1.59
PF04545	Sigma70_r4	1.59
PF12697	Abhydrolase_6	0.79
PF00753	Lactamase_B	0.79
PF07582	Obsolete Pfam Family	0.79
PF00691	OmpA	0.79
PF10099	RskA	0.79
PF13189	Cytidylate_kin2	0.79
PF09107	SelB-wing_3	0.79
PF10027	DUF2269	0.79
PF01042	Ribonuc_L-PSP	0.79
PF12680	SnoaL_2	0.79
PF08281	Sigma70_r4_2	0.79
PF01081	Aldolase	0.79
PF00196	GerE	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	6.35
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	3.17
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	3.17
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.79
COG0800	2-keto-3-deoxy-6-phosphogluconate aldolase	Carbohydrate transport and metabolism [G]	0.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
All Organisms	root	All Organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
cellular organisms	root	All Organisms → cellular organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.97 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.79 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.11 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.17 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.79 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.38 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.79 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.38 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.79 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.38 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.79 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.38 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.79 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.79 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0574709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300000550\|F24TB_12941536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300000858\|JGI10213J12805_10305266	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300000956\|JGI10216J12902_101329522	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300002073\|JGI24745J21846_1008379	Not Available	1165	Open in IMG/M
3300002074\|JGI24748J21848_1061667	Not Available	501	Open in IMG/M
3300002244\|JGI24742J22300_10087496	Not Available	594	Open in IMG/M
3300004479\|Ga0062595_101252876	Not Available	663	Open in IMG/M
3300005093\|Ga0062594_100408556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1101	Open in IMG/M
3300005327\|Ga0070658_10837113	Not Available	800	Open in IMG/M
3300005328\|Ga0070676_10126827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1609	Open in IMG/M
3300005329\|Ga0070683_100098463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2752	Open in IMG/M
3300005332\|Ga0066388_104666913	Not Available	697	Open in IMG/M
3300005333\|Ga0070677_10433321	Not Available	700	Open in IMG/M
3300005337\|Ga0070682_100504386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300005341\|Ga0070691_10660191	Not Available	623	Open in IMG/M
3300005365\|Ga0070688_100258220	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300005366\|Ga0070659_100007419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7965	Open in IMG/M
3300005366\|Ga0070659_101064989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300005441\|Ga0070700_100178621	Not Available	1475	Open in IMG/M
3300005445\|Ga0070708_102186432	Not Available	511	Open in IMG/M
3300005457\|Ga0070662_101216378	Not Available	648	Open in IMG/M
3300005530\|Ga0070679_101542130	Not Available	612	Open in IMG/M
3300005577\|Ga0068857_100496823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300005764\|Ga0066903_100145010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3391	Open in IMG/M
3300005764\|Ga0066903_100744841	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1739	Open in IMG/M
3300005834\|Ga0068851_10148749	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005841\|Ga0068863_100146353	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300005841\|Ga0068863_100614919	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300006237\|Ga0097621_101416575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300006844\|Ga0075428_100208007	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300006846\|Ga0075430_100279716	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300006847\|Ga0075431_100233008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1875	Open in IMG/M
3300006852\|Ga0075433_11226606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300006881\|Ga0068865_100276347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1336	Open in IMG/M
3300006881\|Ga0068865_100661308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300009094\|Ga0111539_12232056	Not Available	635	Open in IMG/M
3300009098\|Ga0105245_10150211	Not Available	2202	Open in IMG/M
3300009098\|Ga0105245_10251503	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300009100\|Ga0075418_10629311	Not Available	1155	Open in IMG/M
3300009146\|Ga0105091_10072818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1548	Open in IMG/M
3300009147\|Ga0114129_11983151	Not Available	704	Open in IMG/M
3300009156\|Ga0111538_10749948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300009162\|Ga0075423_10947186	Not Available	914	Open in IMG/M
3300009162\|Ga0075423_11570523	Not Available	707	Open in IMG/M
3300009168\|Ga0105104_10365185	All Organisms → cellular organisms → Bacteria → Terrabacteria group	799	Open in IMG/M
3300010375\|Ga0105239_10315077	Not Available	1764	Open in IMG/M
3300010397\|Ga0134124_10932009	Not Available	877	Open in IMG/M
3300010399\|Ga0134127_10927109	Not Available	927	Open in IMG/M
3300010401\|Ga0134121_10262340	Not Available	1516	Open in IMG/M
3300011119\|Ga0105246_10945374	Not Available	776	Open in IMG/M
3300012897\|Ga0157285_10097809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300012898\|Ga0157293_10114131	Not Available	715	Open in IMG/M
3300012907\|Ga0157283_10267909	Not Available	576	Open in IMG/M
3300012911\|Ga0157301_10008906	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300012943\|Ga0164241_11061498	Not Available	595	Open in IMG/M
3300012984\|Ga0164309_10028932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3015	Open in IMG/M
3300012989\|Ga0164305_10136100	Not Available	1644	Open in IMG/M
3300013100\|Ga0157373_10351036	Not Available	1052	Open in IMG/M
3300014325\|Ga0163163_10158031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2312	Open in IMG/M
3300014745\|Ga0157377_10131268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1530	Open in IMG/M
3300015200\|Ga0173480_10949817	Not Available	562	Open in IMG/M
3300015371\|Ga0132258_10583065	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300015371\|Ga0132258_11669817	Not Available	1607	Open in IMG/M
3300015371\|Ga0132258_12147840	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300015371\|Ga0132258_12524754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1285	Open in IMG/M
3300015372\|Ga0132256_101734875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300015373\|Ga0132257_100100572	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300015373\|Ga0132257_101678638	Not Available	814	Open in IMG/M
3300017965\|Ga0190266_10040300	Not Available	1569	Open in IMG/M
3300018073\|Ga0184624_10100772	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300018422\|Ga0190265_10004015	All Organisms → cellular organisms → Bacteria	10139	Open in IMG/M
3300018466\|Ga0190268_10239921	Not Available	1031	Open in IMG/M
3300019356\|Ga0173481_10005059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3501	Open in IMG/M
3300019361\|Ga0173482_10736529	Not Available	514	Open in IMG/M
3300019362\|Ga0173479_10321976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300022880\|Ga0247792_1097615	Not Available	600	Open in IMG/M
3300022883\|Ga0247786_1016135	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300023071\|Ga0247752_1079348	Not Available	546	Open in IMG/M
3300023072\|Ga0247799_1027140	Not Available	893	Open in IMG/M
3300023102\|Ga0247754_1104206	Not Available	687	Open in IMG/M
3300025315\|Ga0207697_10462425	Not Available	562	Open in IMG/M
3300025899\|Ga0207642_10147651	Not Available	1247	Open in IMG/M
3300025903\|Ga0207680_10181954	Not Available	1422	Open in IMG/M
3300025904\|Ga0207647_10133821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300025907\|Ga0207645_10062879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2371	Open in IMG/M
3300025907\|Ga0207645_10548470	Not Available	784	Open in IMG/M
3300025908\|Ga0207643_11092149	Not Available	515	Open in IMG/M
3300025911\|Ga0207654_10209387	Not Available	1288	Open in IMG/M
3300025920\|Ga0207649_11072228	Not Available	635	Open in IMG/M
3300025921\|Ga0207652_10467338	Not Available	1136	Open in IMG/M
3300025923\|Ga0207681_10710223	Not Available	836	Open in IMG/M
3300025925\|Ga0207650_10247102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1443	Open in IMG/M
3300025932\|Ga0207690_10512379	Not Available	971	Open in IMG/M
3300025933\|Ga0207706_11612833	Not Available	525	Open in IMG/M
3300025938\|Ga0207704_10262865	Not Available	1302	Open in IMG/M
3300025944\|Ga0207661_10280611	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300025944\|Ga0207661_10485195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300025945\|Ga0207679_10478271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300025960\|Ga0207651_11433044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300025981\|Ga0207640_11053518	Not Available	718	Open in IMG/M
3300025981\|Ga0207640_11662777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300026023\|Ga0207677_10146265	Not Available	1817	Open in IMG/M
3300026035\|Ga0207703_11657396	Not Available	615	Open in IMG/M
3300026075\|Ga0207708_10931474	Not Available	753	Open in IMG/M
3300026088\|Ga0207641_10107811	All Organisms → cellular organisms → Bacteria → Proteobacteria	2464	Open in IMG/M
3300026089\|Ga0207648_10085509	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300026089\|Ga0207648_10958623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300026095\|Ga0207676_10334239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1395	Open in IMG/M
3300026116\|Ga0207674_10057430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3945	Open in IMG/M
3300027909\|Ga0209382_10574471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1231	Open in IMG/M
3300028596\|Ga0247821_11024006	Not Available	554	Open in IMG/M
3300028809\|Ga0247824_10174445	Not Available	1166	Open in IMG/M
3300028889\|Ga0247827_10634641	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300030006\|Ga0299907_10254373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1442	Open in IMG/M
3300031455\|Ga0307505_10241939	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300031892\|Ga0310893_10216388	Not Available	780	Open in IMG/M
3300034090\|Ga0326723_0209676	Not Available	864	Open in IMG/M
3300034819\|Ga0373958_0106520	Not Available	664	Open in IMG/M
3300034820\|Ga0373959_0014801	Not Available	1425	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.14%
Environmental	Environmental	42.86%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.14%
Terrestrial	Environmental → Terrestrial	40.48%
Aquatic	Environmental → Aquatic	2.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.02%
Freshwater	Environmental → Aquatic → Freshwater	1.59%
Roots	Host-Associated → Plants → Roots	1.59%
Sediment	Environmental → Aquatic → Sediment	0.79%
Peat	Environmental → Terrestrial → Peat	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.87%
Loam	Environmental → Terrestrial → Soil → Loam	11.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05747092	2228664021	Soil	MTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPRAAKPFELVARIQFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIGLGATLGGSTTRTTLTFRIS
F24TB_129415361	3300000550	Soil	ASVATGAGADVRMDVISASPQPPHAAQPFLLVARVEFAPAPGSLHASVWVGGRRYRKIRLSWENSIARCSFVVPADARGKRLTVALTATLGGSRSRTTLGYRVS*
JGI10213J12805_103052662	3300000858	Soil	MISRLAAFGAVVLAAAATLASTAPGAGRDVRIEVISVSPQPPRAARPFELVARVEFVPVPGSLRSVVWIGERRFRNMRLVWKDSIARCSFVVPPGARGKRLTIGLTATLGGSRTRTSFTFIVS*
JGI10216J12902_1013295221	3300000956	Soil	MNSRLAAFGAVVLAAATTLVATAPGAGRDVRIDVISASPRPPRAGQPFELVARVEFAPAPGSLRSVVRIGERRFRNIRLVWKDSIARCSFVVPPGARGKRLTIGLTATVGGSLARTSFTFRIS*
JGI24745J21846_10083791	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIG
JGI24748J21848_10616671	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	PGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLXGSATRTTLTFRIA*
JGI24742J22300_100874961	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRXDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0062595_1012528761	3300004479	Soil	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0062594_1004085562	3300005093	Soil	LAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0070658_108371132	3300005327	Corn Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSVTRTTLTFRIA*
Ga0070676_101268273	3300005328	Miscanthus Rhizosphere	SWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS*
Ga0070683_1000984632	3300005329	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS*
Ga0066388_1046669132	3300005332	Tropical Forest Soil	MTSRLAALGAVVLAAATTLASSATGAGVDVRIDVVSVTPRPPRAASPFELVARVQFTPAPGSIHSRVWIGGRRFRNVRCVWTSPIARCSFVVPAGARGKRLTIELAAALGGSRTRTALGFTVSRASG*
Ga0070677_104333212	3300005333	Miscanthus Rhizosphere	LNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0070682_1005043861	3300005337	Corn Rhizosphere	PLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0070691_106601911	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0070688_1002582201	3300005365	Switchgrass Rhizosphere	AVVLAAATTLASSAHGASGDVRIEVLSVTPRSPRAAQPFELVARVEFAPAPGSIRCSVWIGGRRFRNIRLVWDNPTARCYFRLPAGARGKRLTIGLAATLGGSLTRTTLAFRVS*
Ga0070659_10000741910	3300005366	Corn Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS*
Ga0070659_1010649891	3300005366	Corn Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTTLTFRIS*
Ga0070700_1001786211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKR
Ga0070708_1021864321	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0070663_1004946252	3300005455	Corn Rhizosphere	MVRQVKQPARVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIS*
Ga0070662_1012163781	3300005457	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCDFRVPADARGKRLTIGLGATLGGSTTRTALTFRIS*
Ga0070679_1015421301	3300005530	Corn Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIS*
Ga0068857_1004968233	3300005577	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTTLTFRIS*
Ga0066903_1001450102	3300005764	Tropical Forest Soil	MVSRFAAVCAVVLAAATAFASAASGDGVRMDVLSVTPRPPQAGKPFDLVARVEFAPAPGSLHSTVFIGGKRFRNMRLTWNDSIAHCTFVVPASAHGKRLIVGLSAIVGGTRTRTTLGFVVS*
Ga0066903_1007448411	3300005764	Tropical Forest Soil	MAGRCGRKHRRLDHATGWNSVANRRTLTHMIGRVAASGAVMLAAALTLALPASGAGGDVRMDVISTTPRPPQAARPFELVARVEFVPAPGSLHASVWIGDKRYRKIRLSWDGSIARCSFVVPAEAHGKRLTVALAATLGGSRTRTTLGFRIA*
Ga0068851_101487492	3300005834	Corn Rhizosphere	MISWLAALAAVTLAAASIGASSTQGAPGGVRIDVLSVTPSPPRAGRPFALVARVEFAPAPGSIRCSVWVGGMRFRSIRLTWESSIARCYFRVPAGSRGKRLTVGLAATLDGSVTRTALTARVS*
Ga0068863_1001463531	3300005841	Switchgrass Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATL
Ga0068863_1006149191	3300005841	Switchgrass Rhizosphere	AAVVLAAATTLASSAHGASGDVRIEVLSVTPRSPRAAQPFELVARVEFAPAPGSIRCSVWIGGRRFRNIRLVWDNPTARCYFRLPAGARGKRLTIGLAATLGGSLTRTTLAFRVS*
Ga0097621_1014165751	3300006237	Miscanthus Rhizosphere	ATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0075428_1002080072	3300006844	Populus Rhizosphere	MISRLAAFGAVVLAAAATLASTAPGAGRDVRIEVISVSPQPPRAARPFELVARVEFVPAPGSLRSVVWIGERRFRNMRLVWKDSIARCSFVVPPGARGKRLTIGLTATLGGSRTRTSFTFRVS*
Ga0075430_1002797163	3300006846	Populus Rhizosphere	MIGRLAAFGAVVLAAAATLASTAPGAGRDVRIEVISVSPQPPRAARPFELVARVEFVPAPGSLRSVVWIGERRFRNMRLVWKDSIARCSFVVPPGARGKRLTIGLTATLGGSRTRTSFTFRVS*
Ga0075431_1002330084	3300006847	Populus Rhizosphere	AAFGAVVLAAAATLASTAPGAGRDVRIEVISVSPQPPRAARPFELVARVEFVPAPGSLRSVVWIGERRFRNMRLVWKDSIARCSFVVPPGARGKRLTIGLTATLGGSRTRTSFTFRVS*
Ga0075433_112266061	3300006852	Populus Rhizosphere	AVVLAAATPLPSSAQGAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0068865_1002763472	3300006881	Miscanthus Rhizosphere	MISWLAAVAAVVLAAATTLAPSAHGASGDVRIEVLSVTPRSPRAAQPFELVARVEFAPAPGSIRCSVWIGGRRFRNIRLVWDNPTARCYFRLPAGARGKRLTIGLAATLGGSLTRTTLAFRVS*
Ga0068865_1006613082	3300006881	Miscanthus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0111539_122320561	3300009094	Populus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQGAIGDVRIDVLSVAPRPPRAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0105245_101502113	3300009098	Miscanthus Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0105245_102515033	3300009098	Miscanthus Rhizosphere	MTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS*
Ga0075418_106293112	3300009100	Populus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS*
Ga0105247_100229882	3300009101	Switchgrass Rhizosphere	MVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0105091_100728182	3300009146	Freshwater Sediment	MISWLAALTAVALAAATTLASSAQGAPGDVRVDVLSVTPRPPQAAKPFELVARVEFAPAPGSIRCSVWIGGQRFRKIRLVWENSIARCFFRVPAGARGKRLTIGLAATLGGSLTRTTLTFRVT*
Ga0114129_119831512	3300009147	Populus Rhizosphere	MTSWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSVTRTTLTFRIA*
Ga0111538_107499482	3300009156	Populus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQGAIGDVRIDVLSVAPRPPRAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0075423_109471861	3300009162	Populus Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVSRITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIS*
Ga0075423_115705231	3300009162	Populus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQGAIGDVRIDVLSVAPRPPRAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0105104_103651851	3300009168	Freshwater Sediment	MISWLAALTAVALAAATTLASSAQGAPGDVRVDVLSVTPRPPQAAKPFELVARVEFAPAPGSIRCSVWIGGQRFRNIRLVWENSIARCFFRVPAGARGKRLTIGLAATLGGSLTRTTLTFRVT*
Ga0105239_103150772	3300010375	Corn Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0134124_109320091	3300010397	Terrestrial Soil	LERILNRMISWLAALTAVVLAAATPLPSSAQSAIGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHLRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0134127_109271092	3300010399	Terrestrial Soil	LERTLNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0134121_102623401	3300010401	Terrestrial Soil	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLG
Ga0105246_109453741	3300011119	Miscanthus Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKR
Ga0157285_100978091	3300012897	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPAGARGKRLTIGLGATRGGSTTRTTLTFRVS*
Ga0157293_101141311	3300012898	Soil	SIGASSAQGAPGGVRIDVLSMTPSPPRAGRPFALVARVEFAPAPGSIRCSVWVGGMRFRSIRLTWESSIARCYFRVPAGSRGKRLTVGLAATLDGSVTRTALTVRVS*
Ga0157283_102679091	3300012907	Soil	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCQFRVPADAHGKRLTIGLGATLGGSTTRTTLTFRIS*
Ga0157301_100089063	3300012911	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTALTFRIS*
Ga0164241_110614981	3300012943	Soil	MTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAH
Ga0164309_100289323	3300012984	Soil	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGWIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0164305_101361002	3300012989	Soil	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLAGSATRTTLTFRIA*
Ga0157373_103510361	3300013100	Corn Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSSTRTTLTFQIS*
Ga0163163_101580314	3300014325	Switchgrass Rhizosphere	LPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS*
Ga0157377_101312681	3300014745	Miscanthus Rhizosphere	ILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA*
Ga0173480_109498171	3300015200	Soil	RMTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS*
Ga0132258_105830651	3300015371	Arabidopsis Rhizosphere	MISRVAAFGAVVLAAATTLAPAASGVGADVRMDVISVTPRPPRAARPFELVARVEFVPAPGSLHAGVWIGGKRYRKIRLTWEDSIARCSFVVPAEARGKGLTVALVATLGNSRARTTLGFRVS*
Ga0132258_116698174	3300015371	Arabidopsis Rhizosphere	MISRIAAVTAVVLAAATPLPSSAQGATGDVRIDVLSVAPSPPRAAKPFELVARVAFAPAPGSIHCSVWIGGKRFRNIRLEWVNSVARCHFRVPAAAHGKRLTIGLAATLG
Ga0132258_121478402	3300015371	Arabidopsis Rhizosphere	MATANWNSSADGRTLDHMISRIAAFSAVMLAAALLLAPASPGAGADVRVDIITATPRPPQAAQPFDLVARVEFVPAPGSLHAGVWIGGKRFRKIRLSWEDSIARCSFVVPAGARGKRLTIALTATLGGSSTRTALGFKVS*
Ga0132258_125247543	3300015371	Arabidopsis Rhizosphere	DGRTLDHMISRIAALSAVVLAAALPLAPASPGAGTDVRVDIISATPRPPQAARPFDLVARVEFVPAPGSLHAGVWIGGKRFRKIRLSWEDSIARCSFVVPAGARGKRLTIALTATLGGSSTRTALGFKVS*
Ga0132256_1017348751	3300015372	Arabidopsis Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS*
Ga0132257_1001005723	3300015373	Arabidopsis Rhizosphere	MISWLAASTAVLLAAAATLASPAQGAPGGVRIEVLSATPRPPQAEQPFELVARVEFAPAPGSIRCNVWIGGKRFRHIRLRWENSIARCFFRVPAGARGKRLTVGLAATLGGSLTRTTLAFRVA*
Ga0132257_1016786382	3300015373	Arabidopsis Rhizosphere	MISWLAALTAVVLAAATPLPSSAQGAIGDVRIDVLSVAPRPPRAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVF*
Ga0190266_100403004	3300017965	Soil	MISWLAALGAVVLAAALTLASPAQGASGDVRIEVLSVTPRPPRATQHFELVARVEFAPAPGSIRCSVWIGGERFRNIRLVWENSIARCYFRVPAGARGKRLTIGLAATLGGSLTRTTLAFRVS
Ga0184624_101007721	3300018073	Groundwater Sediment	MISWLTALGAVVLAAATTLAPAAPGAGADVRIDLISATPRPPQAARPFDLVARVEFVPAPGSLHASVWISGQRFRKIRLSWEDSIARCSFVVPAEARGKHLTVALTATLGGSTTRTKLGFTVS
Ga0190265_100040151	3300018422	Soil	MLDRMIGRLAAFGAVVLAAAATLSSSAPGAPGDVRIHVISVAPRPPQAAQPFELVARVEFTPAPGSIHCAVWAGGKRFRNIRLVWESSIARCFFRVPAGARGKRLTVGLVAALGGSRTRTTLAFTVA
Ga0190268_102399213	3300018466	Soil	MISWLAALGAVVLAAALTLASPAQGATGDVRIEVLSVTPRPPRAAQHFELVARAEFTPAPGSIRCSVWIGGERFRNIRLVWENSIARCYFRVPAGARGKRLTIGLAATHGGSLTRTTLAFRVS
Ga0173481_100050591	3300019356	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLRATL
Ga0173482_107365291	3300019361	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPAEAHGKRLTIRLVATLGGSATRTTSTFRVS
Ga0173479_103219761	3300019362	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS
Ga0247792_10976151	3300022880	Soil	MTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTALTFRIS
Ga0247786_10161353	3300022883	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTA
Ga0247752_10793481	3300023071	Soil	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTTLTFRVS
Ga0247799_10271402	3300023072	Soil	IGASSAQGAPGGVRIDVLSVTPSPPRAGRPFALVARVEFAPAPGSIRCSVWVGGMRFRSIRLTWESSIARCYFRVPAGSRGKRLTVGLAATLDGSVTRTALTVRVS
Ga0247754_11042062	3300023102	Soil	MTSWLAALTAVVLAAATPLPPSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS
Ga0207697_104624251	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLAGSATRTTLTF
Ga0207642_101476511	3300025899	Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207710_103387261	3300025900	Switchgrass Rhizosphere	ATARVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207680_101819542	3300025903	Switchgrass Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGHVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVACCHFRVSADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207647_101338211	3300025904	Corn Rhizosphere	VLAAATPLPSSAQGATRDVRIDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207645_100628791	3300025907	Miscanthus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGL
Ga0207645_105484701	3300025907	Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207643_110921492	3300025908	Miscanthus Rhizosphere	RTLNRMISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS
Ga0207654_102093872	3300025911	Corn Rhizosphere	MISWLAALTAVVLAAAATLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207649_110722281	3300025920	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRMTIGLGATLGGSTTRTTLMF
Ga0207652_104673382	3300025921	Corn Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS
Ga0207681_107102231	3300025923	Switchgrass Rhizosphere	LAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207650_102471022	3300025925	Switchgrass Rhizosphere	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207690_105123791	3300025932	Corn Rhizosphere	LAAVTLAAASIGASSAQGAPGGVRIDVLSVTPSPPRAGRPFALVARVEFAPAPGSIRCSVWVGGMRFRSIRLTWESSIARCYFRVPAGSRGKRLTVGLAATLDGSVTRTALTVRVS
Ga0207706_116128332	3300025933	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCDFRVPADARGKRLTI
Ga0207704_102628652	3300025938	Miscanthus Rhizosphere	MISWLAAVAAVVLAAATTLAPSAHGASGDVRIEVLSVTPRSPRAAQPFELVARVEFAPAPGSIRCSVWIGGRRFRNIRLVWDNPTARCYFRLPAGARGKRLTIGLAATLGGSLTRTTLAFRVS
Ga0207661_102806112	3300025944	Corn Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS
Ga0207661_104851951	3300025944	Corn Rhizosphere	SAQGATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207679_104782713	3300025945	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADARGKRLTIGLGATLGGSTTRTTLTF
Ga0207651_114330442	3300025960	Switchgrass Rhizosphere	LAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS
Ga0207640_110535182	3300025981	Corn Rhizosphere	MISWLAALTAVVLAAATPLPSSAQGATGDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIALGATLGGSTTRTTLTFRIS
Ga0207640_116627772	3300025981	Corn Rhizosphere	AQSAIGDVRIDVLSVAPRPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSIARCHFRVPADAHGKRLTIGLGATLGGSVTRTTLAFRVS
Ga0207677_101462651	3300026023	Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS
Ga0207703_116573961	3300026035	Switchgrass Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRT
Ga0207678_100557474	3300026067	Corn Rhizosphere	MVRQVKQPARVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207708_109314741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKR
Ga0207641_101078114	3300026088	Switchgrass Rhizosphere	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGAILG
Ga0207648_100855092	3300026089	Miscanthus Rhizosphere	MISWLAAVAAVVLAAATTLAPSAHGASGDVRIEVLSVTPRSPRAAQPFELVARVEFAPAPGSIRCSVWIGGRRFRNIRLVWYNPTARCYFRLPAGARGKRLTIGLAATLGGSLTRTTLAFRVS
Ga0207648_109586231	3300026089	Miscanthus Rhizosphere	MISWLAALTAVVLAAATPLPSSAQSAIGDVRIDVLSVAPRPPHAAKPFALVARIEFSPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIAL
Ga0207676_103342392	3300026095	Switchgrass Rhizosphere	RILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0207674_100574301	3300026116	Corn Rhizosphere	MTSWLAALTAVVLAAATPLPSSAQGATRDVRIDVLSVAPSPPHAAKPFALVARIEFAPAPGSIRCSVWIGGKRFRKIRLEWVNSVARCHFRVPADAHGKRMTIGLGATLGGSTTRTTLTFRIS
Ga0209382_105744711	3300027909	Populus Rhizosphere	AATLASTAPGAGRDVRIEVISVSPQPPRAARPFELVARVEFVPAPGSLRSVVWIGERRFRNMRLVWKDSIARCSFVVPPGARGKRLTIGLTATLGGSRTRTSFTFRVS
Ga0247818_110286571	3300028589	Soil	GKVKQPARVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSTTRTTLTFRIA
Ga0247821_110240061	3300028596	Soil	TLNRMISWLAALTAVVLAAATTLPSSAQSATGDVRLDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0247824_101744452	3300028809	Soil	MISWLAALTAVVLAAATTLPSSAQSATGDVRLDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS
Ga0247827_106346411	3300028889	Soil	LACASPGRRLIRMTSRIAALGAVVLAAATTLASSAPGADVDVRIEVVSVTPRPPRAARPFELVARVQFAPAPGSIHSRVWIGGRRFRNVRCTWTSPIARCSFVVPAEARGKRLTIELAAALGGSRTRTALAFTVAPR
Ga0299907_102543734	3300030006	Soil	MLDRMIGRLAAFGAVVLAAAATLSSSAPGAPGDVRIHVISVTPRPPQAAQPFELVARVEFTPAPGSIHCAVWAGGKRFRNIRLVWESSIARCFFRVPAGARGKRLTVGLVAALGGSRTRTTLAFTVA
Ga0307505_102419392	3300031455	Soil	MTSWLAALTAVVLAAATPLPSSAQGAIGDVRIDVLSVAPSPPHAAKPFELVARIEFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHGKRLTIGLGATLGGSATRTTLTFRVT
Ga0310893_102163881	3300031892	Soil	MISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRKIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0310890_101543442	3300032075	Soil	GKVKQPARVSETYPGSPRCEIASPIDGRGLWRPRELERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFRIA
Ga0326723_0209676_481_852	3300034090	Peat Soil	MISRLAAFGAVVLAAATTLAPAAPGAGGDVRMDVISATPRPPHAAQPFDLVARVEFVPAPGSLHASVWIGGKRYRKIRLSWEDSIARCSFVVPADAHGKRLTVALTATLGGSSTRTTLGFRVS
Ga0373958_0106520_157_549	3300034819	Rhizosphere Soil	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRMDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLGGSATRTTLTFQIS
Ga0373959_0014801_234_626	3300034820	Rhizosphere Soil	LERILNRMISWLAALTAVVLAAATTLPSSAQSATGDVRVDVLSVAPSPPRAAQPFELVARITFAPAPGSIRCSVWIGGKRFRNIRLEWVNSVARCHFRVPADAHAKRLTIGLGATLAGSATRTTLTFPIS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign