Metagenome / Metatranscriptome Family F066861

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066861
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	69 residues
Representative Sequence	IPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY
Number of Associated Samples	116
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.00 %
% of genes near scaffold ends (potentially truncated)	96.03 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.413 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.841 % of family members)
Environment Ontology (ENVO)	Unclassified (38.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.79% β-sheet: 24.21% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
b.160.1.1: L,D-transpeptidase catalytic domain-like	d4a1ia2	4a1i	0.65881
b.160.1.1: L,D-transpeptidase catalytic domain-like	d3vypa2	3vyp	0.64244
b.160.1.1: L,D-transpeptidase catalytic domain-like	d1zata1	1zat	0.61153
b.40.2.1: Bacterial AB5 toxins, B-subunits	d5elba_	5elb	0.56344
c.8.4.1: PA domain	d5o5ta2	5o5t	0.56132

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF03734	YkuD	54.76
PF08291	Peptidase_M15_3	2.38
PF00483	NTP_transferase	0.79
PF10047	DUF2281	0.79
PF00069	Pkinase	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	54.76
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	54.76
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.17

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.41 %
Unclassified	root	N/A	1.59 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	91.27 %
Unclassified	root	N/A	1.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	91.27 %
Unclassified	root	N/A	1.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	60.32 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	13.49 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.32 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	13.49 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.32 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	13.49 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.32 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	6.35 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	1.59 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.32 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	3.17 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	3.17 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.59 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.32 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	3.17 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	3.17 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1.59 %
Unclassified	root	N/A	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000878\|AL9A1W_1010180	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2102	Open in IMG/M
3300000886\|AL3A1W_1088349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	532	Open in IMG/M
3300000887\|AL16A1W_10139261	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300001330\|A305W6_1085577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	622	Open in IMG/M
3300002915\|JGI25387J43893_1067611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	528	Open in IMG/M
3300005093\|Ga0062594_101719649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	656	Open in IMG/M
3300005184\|Ga0066671_10510818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	772	Open in IMG/M
3300005295\|Ga0065707_10169595	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300005329\|Ga0070683_101348754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300005344\|Ga0070661_100792549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	777	Open in IMG/M
3300005440\|Ga0070705_100379375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1040	Open in IMG/M
3300005441\|Ga0070700_101370902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300005458\|Ga0070681_10639064	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	979	Open in IMG/M
3300005468\|Ga0070707_102294569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300005518\|Ga0070699_100159851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1994	Open in IMG/M
3300005539\|Ga0068853_101767738	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	599	Open in IMG/M
3300005546\|Ga0070696_101693469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300005547\|Ga0070693_100001615	All Organisms → cellular organisms → Bacteria	10179	Open in IMG/M
3300005553\|Ga0066695_10153524	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1434	Open in IMG/M
3300005560\|Ga0066670_10137289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1415	Open in IMG/M
3300005569\|Ga0066705_10588586	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	684	Open in IMG/M
3300005578\|Ga0068854_100481632	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1042	Open in IMG/M
3300005938\|Ga0066795_10001420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5440	Open in IMG/M
3300006046\|Ga0066652_100174647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1826	Open in IMG/M
3300006237\|Ga0097621_102384043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300006852\|Ga0075433_11175131	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300006954\|Ga0079219_10779534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300009174\|Ga0105241_10379863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1234	Open in IMG/M
3300009174\|Ga0105241_12273580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	539	Open in IMG/M
3300010159\|Ga0099796_10481806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300010373\|Ga0134128_11357445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300010397\|Ga0134124_10610200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1070	Open in IMG/M
3300011332\|Ga0126317_11010268	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	521	Open in IMG/M
3300011998\|Ga0120114_1013739	Not Available	1783	Open in IMG/M
3300012001\|Ga0120167_1017548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1860	Open in IMG/M
3300012185\|Ga0136619_10362657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300012198\|Ga0137364_10838278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300012200\|Ga0137382_10215917	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1321	Open in IMG/M
3300012200\|Ga0137382_10239313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1255	Open in IMG/M
3300012201\|Ga0137365_10339194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1111	Open in IMG/M
3300012203\|Ga0137399_10774395	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	808	Open in IMG/M
3300012206\|Ga0137380_10328051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1368	Open in IMG/M
3300012210\|Ga0137378_11507257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300012211\|Ga0137377_10467435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1200	Open in IMG/M
3300012211\|Ga0137377_11120458	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300012285\|Ga0137370_10870341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	558	Open in IMG/M
3300012356\|Ga0137371_10792839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300012469\|Ga0150984_114795751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300012678\|Ga0136615_10141453	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1137	Open in IMG/M
3300012955\|Ga0164298_10550301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300012958\|Ga0164299_11210693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300012972\|Ga0134077_10453921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300012977\|Ga0134087_10699633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300013100\|Ga0157373_10096668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2079	Open in IMG/M
3300013100\|Ga0157373_10770844	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300013100\|Ga0157373_10873735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	666	Open in IMG/M
3300013503\|Ga0120127_10026053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1068	Open in IMG/M
3300013763\|Ga0120179_1038656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1115	Open in IMG/M
3300013831\|Ga0120126_1008560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	794	Open in IMG/M
3300014054\|Ga0120135_1033650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	718	Open in IMG/M
3300014829\|Ga0120104_1085900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300015076\|Ga0167656_1040594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300015079\|Ga0167657_1015621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1016	Open in IMG/M
3300015162\|Ga0167653_1072169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300015197\|Ga0167638_1014149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1888	Open in IMG/M
3300018028\|Ga0184608_10156376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	985	Open in IMG/M
3300018056\|Ga0184623_10521068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300018061\|Ga0184619_10079871	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300018061\|Ga0184619_10086772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1395	Open in IMG/M
3300018431\|Ga0066655_10344334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	977	Open in IMG/M
3300019865\|Ga0193748_1014028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300019867\|Ga0193704_1034869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300019874\|Ga0193744_1009100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1809	Open in IMG/M
3300019878\|Ga0193715_1050839	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	889	Open in IMG/M
3300019878\|Ga0193715_1115981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	522	Open in IMG/M
3300019879\|Ga0193723_1009090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3222	Open in IMG/M
3300019889\|Ga0193743_1220624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300020001\|Ga0193731_1176848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300020004\|Ga0193755_1033148	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1706	Open in IMG/M
3300020010\|Ga0193749_1053756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300020015\|Ga0193734_1078204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	572	Open in IMG/M
3300021080\|Ga0210382_10120589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1107	Open in IMG/M
3300021363\|Ga0193699_10106357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1135	Open in IMG/M
3300021951\|Ga0222624_1355376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300022534\|Ga0224452_1191433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300022756\|Ga0222622_11303797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	534	Open in IMG/M
3300023056\|Ga0233357_1039991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300025544\|Ga0208078_1066503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	751	Open in IMG/M
3300025907\|Ga0207645_10285570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1096	Open in IMG/M
3300025912\|Ga0207707_11610651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	511	Open in IMG/M
3300025918\|Ga0207662_10575285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300025918\|Ga0207662_11207656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300025920\|Ga0207649_10705795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300025928\|Ga0207700_11113519	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300025939\|Ga0207665_10477220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300025941\|Ga0207711_11858551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M
3300025949\|Ga0207667_10230792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1895	Open in IMG/M
3300025981\|Ga0207640_10452609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1058	Open in IMG/M
3300025981\|Ga0207640_12185677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300026067\|Ga0207678_11224823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300026223\|Ga0209840_1038711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1080	Open in IMG/M
3300026300\|Ga0209027_1057305	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300026322\|Ga0209687_1251652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300026538\|Ga0209056_10083595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2681	Open in IMG/M
3300026548\|Ga0209161_10068360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2241	Open in IMG/M
3300026751\|Ga0207594_103914	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	619	Open in IMG/M
3300027543\|Ga0209999_1014061	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300027765\|Ga0209073_10322136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300028146\|Ga0247682_1094488	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300028536\|Ga0137415_10126577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2399	Open in IMG/M
3300028705\|Ga0307276_10144831	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300028716\|Ga0307311_10093902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	833	Open in IMG/M
3300028768\|Ga0307280_10176560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300028793\|Ga0307299_10100134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1083	Open in IMG/M
3300028799\|Ga0307284_10430634	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300028811\|Ga0307292_10108996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1094	Open in IMG/M
3300028814\|Ga0307302_10106910	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300028824\|Ga0307310_10040330	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1915	Open in IMG/M
3300028880\|Ga0307300_10163107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	707	Open in IMG/M
3300028885\|Ga0307304_10037963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1729	Open in IMG/M
3300031164\|Ga0307502_10125258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300031231\|Ga0170824_103045598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1159	Open in IMG/M
3300031231\|Ga0170824_103330979	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300032180\|Ga0307471_102190692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	696	Open in IMG/M
3300034817\|Ga0373948_0081229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.13%
Host-Associated	Host-Associated	15.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.40%
Plants	Host-Associated → Plants	15.87%
Aquatic	Environmental → Aquatic	8.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.32%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Freshwater	Environmental → Aquatic → Freshwater	3.97%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.49%
Loam	Environmental → Terrestrial → Soil → Loam	10.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.59%
Ice	Environmental → Aquatic → Freshwater → Ice	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.32%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	8.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.17%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.59%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001330	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-5cm)- 6 month illumina	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015076	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6a, vegetation/snow interface)	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026751	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A2w-12 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AL9A1W_10101803	3300000878	Permafrost	PDAPPAAVPRGERTIADLSSEKITLDGGATIFSSKASQLAADTTAIPPGSLRMSLEDLKAIMPNLSAGMKVYFY*
AL3A1W_10883492	3300000886	Permafrost	ADLSGDKITLDGGATIFTSKASQLASDTTAIPPGSLRMSLEDLKAIMPNLSAGMKVYFY*
AL16A1W_101392612	3300000887	Permafrost	AVPRGERTIADLSDTKITLDGGALILTTKSPQLTGDTTAIPPGSLRISLEDLKAIMPNLSNGMKVYFY*
A305W6_10855771	3300001330	Permafrost	DLSGDKITLDGGATIFTSKASQLASDTTAIPPGSLRMSLEDLKAIMPNLSAGMKVYFY*
JGI25387J43893_10676112	3300002915	Grasslands Soil	DGGTQILTSTTADLTNDSTPVPPGSLRIRKEDLDAIMPNLSAGMKVYFY*
Ga0062594_1017196492	3300005093	Soil	IADLSDTKITLDGGAFIFSSQTPKLEGDTSQIQPGSLRIALEDMQAIKPNLNAGMKVYFY
Ga0066671_105108182	3300005184	Soil	SPNDSAPPEAIPRGERTIAELADTRIILDGGAQILSSSTANDPTPVPPGSLRISTEDMKAIMPNLSAGMKVYFY*
Ga0065707_101695953	3300005295	Switchgrass Rhizosphere	RGERTVAELSEGKITLDGGTSILTSPGSLANDSTPIPPGSLRITLEDMKAIRPNLNAGMKVYFY*
Ga0070683_1013487542	3300005329	Corn Rhizosphere	DLSDTKITLDGGAFIFSSQTPKLEGDTSQIQPGSLRIALEDMQAIKPNLNAGMKVYFY*
Ga0070661_1007925491	3300005344	Corn Rhizosphere	TIADLSDTKITLDGGAFIFSSQTPKLEGDTSQIQPGSLRIALEDMHAIKPNLNAGMKVYFY*
Ga0070705_1003793751	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VQFGPEKPADSAGGPPAAVPRGERTVADLSDTKITLDGGTQILSSASADLANDSTPVPPGALRIRKEDMSAIMPNLSAGMKVYFY*
Ga0070700_1013709021	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	ADLSDTKITLDGGTQILSSASADLANDSTPVPAGALRIRKEDMSAIMPNLSAGMKVYFY*
Ga0070681_106390641	3300005458	Corn Rhizosphere	ITLDGGTQILSSASADLANDSTPVPAGALRIRKEDMSAIMPNLSAGMKVYFY*
Ga0070707_1022945692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TVADLSAEKITLDGGVFILSSKEQQLANDSTPIPPGSLRITLEDMKAIMPNLTAGMKVYFY*
Ga0070699_1001598511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PRGERTVADLSDTKITLDGGTQILSSPNANLANDSTPVPPGSLRIRKEDMDAIMPNLSAGMKVYFY*
Ga0068853_1017677382	3300005539	Corn Rhizosphere	FGPERSASEASDAPPAAIPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY*
Ga0070696_1016934691	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GAPPTALPRGERTVADLSDTGITLDGGIQILTSSSENLASDSTPVPAGSLRIRKEDMDAIKPNLSAGMKVYFY*
Ga0070693_10000161514	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VPRGERTVADLSDTKITLDGGTQILSSASADLANDSTPVPPGALRIRKEDMSAIMPNLSAGMKVYFY*
Ga0066695_101535243	3300005553	Soil	LSATRITLDGGTQILSSDTPSLVNDSTPIPPGSLRISLEDMKAIMPNLSAGMKVYFY*
Ga0066670_101372891	3300005560	Soil	RGERTVADLSDTKIVLDGGTEILTSPSKELFNDSTPVPPGSLRIRKEDLDAIMPNLSAGMKVYFY*
Ga0066705_105885862	3300005569	Soil	PAASSNAPPAVMPRGERTVANLSDTKITLDGGTQILTSPADNLANDSMPVPPGALRIRKQDLDAIMPNLSAGMKVYFY*
Ga0068854_1004816321	3300005578	Corn Rhizosphere	PAAIPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY*
Ga0066795_100014208	3300005938	Soil	SDAPPAAIPRGERTVADLSETKITLDGGTQILSSQSAQLANDSTAIPPGSLRITLVDMKAIKPNLNAGMKVYFY*
Ga0066652_1001746471	3300006046	Soil	RGERTVAELSDTKITLDGGTQILTSPADNLANDSMPVPPGALRIRKEDLDAIMPNLSAGMKVYFY*
Ga0097621_1023840431	3300006237	Miscanthus Rhizosphere	LDGGTQILTSSSENLETDSSPIPPGSLRIRKEDMSAIMPNLSAGMKVYFY*
Ga0075433_111751311	3300006852	Populus Rhizosphere	PVQFGPERPAAPTDTAPPVAIPRGERTIADLSDTRIVLDGGIQILTSNTAQLANDSTAIPPGSLRISSEDMKAIKPNLSAGMKVYFY*
Ga0079219_107795342	3300006954	Agricultural Soil	DLGDTRIVLDGGTQILSASKANDSTPVPPGSLRISSDDMKAIMPNLSAGMKVYFY*
Ga0105241_103798631	3300009174	Corn Rhizosphere	GPPAAVPRGERTVADLSDTKITLDGGTQILSSASADLANDSTPVPAGALRIRKEDMSAIMPNLSAGMKVYFY*
Ga0105241_122735802	3300009174	Corn Rhizosphere	FGPERGVSDSSSAPPAAIPRGERTIADLSDTKITLDGGAFIFSSQTPKLEGDTSQIQPGSLRIALEDMQAIKPNLNAGMKVYFY*
Ga0099796_104818061	3300010159	Vadose Zone Soil	SDTKITLDGGTQILSSRSTHVANDSTPIPPGSLRISIEDMKAIMPNLTAGMKVYFY*
Ga0134128_113574451	3300010373	Terrestrial Soil	ERTVADLSDTGITLDGGIQILTSSSENLASDSTPVPAGSLRIRKEDMDAIKPNLSAGMKVYFY*
Ga0134124_106102002	3300010397	Terrestrial Soil	GPERPPTPKDTAPPQAIPRGERTIADLSDTRIVLDGGAQILSSSSAQLSNDTTAIPPGSLRITAEDMKAIMPNLSAGMKVYFY*
Ga0126317_110102681	3300011332	Soil	ERVPAESASAPPAALPRGERTVADLSDTHITLDGGTQILISPSENLGTDSTPIPPGSLRIRKEDMSAIMPNLSAGMKVYFY*
Ga0120114_10137394	3300011998	Permafrost	RSPSESSDSLPAAIPRGERTVAELSDTKITLDGGAQILSSESAQLANDSTAIPPGSLRISIVDMKAIKPNLNAGMKVYFY*
Ga0120167_10175483	3300012001	Permafrost	MRLPPRVPRGERTIADLSDTKITLDGGALILTTKSPQLTGDTTAIPPGSLRISLEDLKAIMPNLSNGMKVYFY*
Ga0136619_103626571	3300012185	Polar Desert Sand	IPRGERTVADIGEGRITLDGGTVILASDAGRSGNDSTPIPPGALRIAREDMEAIKPNLSAGMKVYFY*
Ga0137364_108382781	3300012198	Vadose Zone Soil	SSNAPPAVMPRGERTVAELSDTRITLDGGTQILTSPADNLANDSMPVPPGALRIRKEDLDAIMPNLSAGMKVYFY*
Ga0137382_102159173	3300012200	Vadose Zone Soil	VADISDTRITLDGGTQILSSASDNLPNDSTPVPPGSLRIKKEDMNAIMPNLSAGMKVYFY
Ga0137382_102393132	3300012200	Vadose Zone Soil	SSTPPAPLPRGERTVADLSDTKITLDGGTQILSSPNENLANDSTPVPPGSLRIRKEDMNAIMPNLSAGMKVYFY*
Ga0137365_103391941	3300012201	Vadose Zone Soil	VADLSATRITLDGGTQILSSATAAMANDSTPIPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0137399_107743951	3300012203	Vadose Zone Soil	PVQFGPERSPSESSDAPPAAIPRGERTVADLSDTKITLDGGTQIFSSNGPRLANDSTPIPPGSLRISIEDMKAIMPNLSAGMKVYFY*
Ga0137380_103280511	3300012206	Vadose Zone Soil	GGTQILSSNTPELVNDSTPIPPGSLRIGRDDMKAIMPNLSAGMKVYFY*
Ga0137378_115072571	3300012210	Vadose Zone Soil	PSESSDAPPAAIPRGERTVADLSDTKITLDGGTQILSSSSARLANDSTPIPPGSLRISIDDMRAIMPNLSAGMKVYFY*
Ga0137377_104674351	3300012211	Vadose Zone Soil	TPPAAIPRGERTVADLSDTRITLDGGVLILSSTTPALANDSTPVPPGSLRISREDMKAIMPNLSAGMKVYFY*
Ga0137377_111204581	3300012211	Vadose Zone Soil	AESSATPPAALPRGERTVADLSDTKIILDGGTQILTSPNENLANDSTPIPPGALRIRKEDMDAIKPNLSAGMKVYFY*
Ga0137370_108703412	3300012285	Vadose Zone Soil	VADLSPTRITLDGGTQILASATPTLANDSTPIPPGSLRISLEDMKAIMPNLNAGM
Ga0137371_107928392	3300012356	Vadose Zone Soil	AVQLGAARVAWESASAPPAAIPRGERTVADLAETSITLDGGTQILSSNTPELVNDSTPIPPGSLRISRDDMKAIMPNLSAGMKVYFY*
Ga0150984_1147957511	3300012469	Avena Fatua Rhizosphere	SSEPPAAVPRGERTVADLSDNSITLDGGARILSSKSNDPVNGSTPLPPGSLRISIDDMKAIMPNLSAGMKVYFY*
Ga0136615_101414531	3300012678	Polar Desert Sand	RPADENSSAPPVAIPRGERTVADIGEGRITLDGGTVILASDAGKSANDSTPIPPGALRIAREDMEAIKPNLSAGMKVYFY*
Ga0137395_105686822	3300012917	Vadose Zone Soil	DGGTQILSSNSARLANDSTPIPPGSLRITIEDMKAIMPNLSAGMKVYFY*
Ga0164298_105503012	3300012955	Soil	AELSDTKITLDGGAYILSAKTSNDSTPIPPGSLRIPLEDMKAIMPNLSAGMKVYFY*
Ga0164299_112106932	3300012958	Soil	ESSAAPPAAIPRGERTVADLSDDSIVLDGGTRILSSKSANPVNDSTPIPPGSLRISSEDMKAIMPNLSAGMKV*
Ga0134077_104539211	3300012972	Grasslands Soil	ITLDGGTQILTSESENLASDSTPVPPGALRIRKEDMTAIMPNLSAGMKVYFY*
Ga0134087_106996331	3300012977	Grasslands Soil	PAALPRGERTVADLSDTKIVLDGGTEILTSPSKELFNDSTPVPPGSLRIRKEDLDAIMPNLSAGMKVYFY*
Ga0157373_100966681	3300013100	Corn Rhizosphere	SAPPAAIPRGERTVADLNDNSIVLDGGTRILASKDTNPANDSTPIPPGALRISLEDMKAIMPNLSAGMKVYFY*
Ga0157373_107708442	3300013100	Corn Rhizosphere	ERTVADLNDNSIVLDGGSRILTSKDSNPADDSTPIPPGALRISLEDMKAIMPNLSAGMKVYFY*
Ga0157373_108737352	3300013100	Corn Rhizosphere	APSPSDSAPPEAIPRGERTIADLSDTRIVLDGGTQILSTNSANDSTPVPPGSLRISSDDMKAIMPNLSAGMKVYFY*
Ga0120127_100260532	3300013503	Permafrost	AIPRGERTIADLSDTRITLDGGAFIFTSQTPKLESDTSQVPAGSLRIALEDMQAIKPNLSAGMKVYFY*
Ga0120179_10386561	3300013763	Permafrost	ERTIADLSDTKIPLDGGATIFTSRAAQLAADTTAIPAGSLRISLEDLKAIMPNLSAGMKVYFY*
Ga0120126_10085601	3300013831	Permafrost	RDRERTIADLSATRITLDGGAFIFTSQTPKLESDTSQVPAGSLRLALEDMQAIKPNLSAGMKVYFY*
Ga0120135_10336502	3300014054	Permafrost	DKITLDGGASILSSKASELTADTTAVPPGSLRMRLEDLQAIMPNLNAGMKVYFY*
Ga0120104_10859001	3300014829	Permafrost	PERPESDTSSAPPAAIPRGERTIADLSDDKITLDGGVVVLTSSAPDLTADATPIPPGSLRMSLVDLKAIMPNLTAGMKVYFY*
Ga0167656_10405942	3300015076	Glacier Forefield Soil	ITLDGGADILTSKASELTADTTPVPPGSLRIGLEDFKAIMPNLNAGMKVYFY*
Ga0167657_10156211	3300015079	Glacier Forefield Soil	LSNTKITLDGGATILTSRAPQLTADTTAIPPGSLRISLEDLKAIMPNLSAGMKVYFY*
Ga0167653_10721692	3300015162	Glacier Forefield Soil	SSSAPPAAIPRGERTIAELSDTKITLDGGAFIFASQTPKLEADASEVPAGSLRIALEDMQAIKPNLNAGMKVYFY*
Ga0167638_10141493	3300015197	Glacier Forefield Soil	MLPVQFGPERSPSQSSDSLPAAIPRGERTVADLSETKITLDGGTQILSSESAQLANDSTAIPPGSLRISIVDMKAIKPNLNAGMKVYFY*
Ga0184608_101563761	3300018028	Groundwater Sediment	RGERTVAERSDEKITLDGGTSILTSPGSLANDSTPIPPGSLRIPLEDLKAIRPNLSAGMKVYFY
Ga0184623_105210681	3300018056	Groundwater Sediment	PESRASESSDAPPAAIPRGERTVGDLSGGRIALDGGAYILSSKTPTLANDSTAVPPGSLRIGLEDMRAIRPNLNAGMKVYFY
Ga0184619_100798713	3300018061	Groundwater Sediment	AVESAPPATIPRGERTVADLSASKITLDGGVYILSSDSPQIANDSTPIPPGSLRISLVDMKAIMPNLSAGMKVYFY
Ga0184619_100867721	3300018061	Groundwater Sediment	LSDTRITLDGGVLILSSATPALANDSTPVPPGSLRISREDMKAIMPNLSAGMKVYFY
Ga0066655_103443342	3300018431	Grasslands Soil	VPAESASAPPAALPRGERTVADLSDTKIVLDGGTEILTSPSKELFNDSTPVPPGSLRIRKEDLDAIMPNLSAGMKVYFY
Ga0193748_10140281	3300019865	Soil	DLSESKITLDGGAAIFASKGAIANDSTPIPPGSLRISQEDMTAIMPNLNAGMKVYFY
Ga0193704_10348692	3300019867	Soil	ASDSAPPAAIPRGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0193744_10091003	3300019874	Soil	ITLDGGAQILSSTSAQLANDSTPIPAGSLRITIEDMKAIKPNLNAGMKVYFY
Ga0193715_10508392	3300019878	Soil	DLTDTKITLDGGAYILSSESKQVANDSTPIPAGSLRISLEDMKAIMPNLKAGMKVYFY
Ga0193715_11159811	3300019878	Soil	ESSDTPPAAIPRGERTVADLSETKITLDGGTQILSSTSTRLANDSTPIPPGSLRISIEDMKAIMPNLSAGMKVYFY
Ga0193723_10090905	3300019879	Soil	PSESSDTPPAAIPRGERTVADLSETKITLDGGTQILSSTSTRLANDSTPIPPGSLRISIEDMKAIMPNLSAGMKVYFY
Ga0193743_12206241	3300019889	Soil	ASDSSDAPPVAVPRGERTVADLADTRITLDGGTYIVATTAPNIANDSTPIPPGSLRVGREDMKAIMPNLKTGMKVYFY
Ga0193731_11768481	3300020001	Soil	DTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0193755_10331483	3300020004	Soil	EMPVQFGPERGVSASDSAPPAAIPRGERTVAELSDTRITLDGGTSILTSPTSLANDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0193749_10537561	3300020010	Soil	RTIADLSDTKITLDGGAFIFTSQTPKLEGDTSQVPAGSLRVALEDMQAIKPNLSAGMKVYFY
Ga0193734_10782041	3300020015	Soil	ADLSETKITLDGGTQILTSESAQIANDSTAIPPGSLRISIVDMKAIKPNLNAGMKVYFY
Ga0210382_101205891	3300021080	Groundwater Sediment	GERTVADLSETKITLDGGTQILSSSSTRLANDSTPIPPGSLRISIEDMKAIMPNLSAGMKVYFY
Ga0193699_101063571	3300021363	Soil	ERTVAALSDTKITLDGGTQILSSPSAQIANDSTAIPPGSLRISLEDMKAIMPNLNAGMKVYFY
Ga0222624_13553761	3300021951	Groundwater Sediment	TVADLSDTKITLDGGTQILTSTSAQLANDSTPIPPGSLRISIEDMKAIKPNLNAGMKVYF
Ga0224452_11914332	3300022534	Groundwater Sediment	PPAAIPRGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0222622_113037972	3300022756	Groundwater Sediment	PRGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0233357_10399912	3300023056	Soil	SDTKIILDGGTQILSSSSAKLANDSTPIPPGSLRIGIEDMKAIMPNLSAGMKVYFY
Ga0208078_10665032	3300025544	Arctic Peat Soil	ARPAAVPRGERTIADLSDTKITLDGGAFILSSASSQLNADTTSIPPGSLRMRLEDLKAIMPNLSSGMKVYFY
Ga0207645_102855702	3300025907	Miscanthus Rhizosphere	PERPVTETSDAPPAAIPRGERTVADLDDTRITLDGGTFILAANAPTIAADSTPIPPGSLRVGKEDMKAIMPNLKTGMKVYFY
Ga0207707_116106511	3300025912	Corn Rhizosphere	REMPVQFGPERPADSSSGPPAALPRGERTAADLSATKITLDGGTQILTSSSQDLASDASPVPPGSLRIRKEDMDAIMPNLSAGMKVYFY
Ga0207662_105752852	3300025918	Switchgrass Rhizosphere	DLSDTKITLDGGTQILTSSSENLASDSTPVPPGALRIRKEDMNAIMPNLSAGMKVYFY
Ga0207662_112076562	3300025918	Switchgrass Rhizosphere	GAPPTALPRGERTVADLSDTGITLDGGIQILTSSSENLASDSTPVPAGSLRIRKEDMDAIKPNLSAGMKVYFY
Ga0207649_107057952	3300025920	Corn Rhizosphere	ERTIADLSDTKITLDGGAFIFSSQTPKLEGDTSQIQPGSLRIALEDMHAIKPNLNAGMKVYFY
Ga0207700_111135192	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LSDTKITLDGGTQILSTTSGQLASDSTAIPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0207665_104772202	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PVQFGPERPADSSSGPPAALPRGERTVADLSATKITLDGGTQILTSSSQDLASDASPVPPGSLRIRKEDMDAIMPNLSAGMKVYFY
Ga0207711_118585512	3300025941	Switchgrass Rhizosphere	SASGPPAALPRGERTVADLSDTKITLDGGTQILTSSSENLASDSTPVPPGALRIRKEDMNAIMPNLSAGMKVYFY
Ga0207667_102307923	3300025949	Corn Rhizosphere	MPVQFGPERSPSEASDAPPAAIPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0207640_104526092	3300025981	Corn Rhizosphere	APPAAIPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0207640_121856772	3300025981	Corn Rhizosphere	AIPRGERTIADLSDTRIVLDGGAQILSSSSAQLSNDTTAIPPGSLRITAEDMKAIMPNLSAGMKVYFY
Ga0207678_112248231	3300026067	Corn Rhizosphere	VTSEQAAEQGRREDLEQFGPERGVSDSSSAPPAAIPRGERTIADLSDTKITLDGGAFIFTSQTPKLEGDTSPVQPGSLRIALEDMQAIKPNLSAGMKVYFY
Ga0209840_10387111	3300026223	Soil	EMPVQFGPERTPSESSDAPPAAIPRGERTVADLSETKITLDGGTQILSSESAQLANDSTAIPPGSLRISLVDMKAIKPNLNAGMKVYFY
Ga0209027_10573052	3300026300	Grasslands Soil	MWRVLGGAPPAALPRGERTVADLSDTKIVLDGGTEILTSPSKELRNDSTPVPPGSLRIRKEDLDAIMPNLSAGMKVYFY
Ga0209687_12516522	3300026322	Soil	PPAPLPRGERTVAEISDTKITLDGGTQILSSPNENLANDATPVPPGSLRIRKEDMNAIMPNLSAGMKVYFY
Ga0209056_100835954	3300026538	Soil	ASAPPAAIPRGERTVADLSETSITLDGGTQILSSNTPELVNDSTPIPPGSLRISRDDMKAIMPNLSAGMKVYFY
Ga0209161_100683601	3300026548	Soil	PPAAIPRGERTVADLSETSITLDGGTQILSSNTPELVSDSTPIPPGSLRISRDDMKAIMPNLSAGMKVYFY
Ga0207594_1039141	3300026751	Soil	DAKITLDGGAYIGSVKSLNDSTPIAPGTLRITREDMDAIMPNLKAGMKVYFY
Ga0209999_10140613	3300027543	Arabidopsis Thaliana Rhizosphere	AAIPRGERTVADLDDTRITLDGGTFILAANAPTIAADSTPIPPGSLRVGKEDMKAIMPNLKTGMKVYFY
Ga0209073_103221362	3300027765	Agricultural Soil	EMAVQFGPEKAPSPSDSAPPEAIPRGERTIADLSDTRIVLDGGTQILSTNSANDSTPVPPGSLRISSDDMKAIMPNLSAGMKVYFY
Ga0247682_10944881	3300028146	Soil	IPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTPVPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0137415_101265774	3300028536	Vadose Zone Soil	RGERTVSDLSDTKITLDGGTQILSSQSTKVADDSTPIPPGSLRISLEDMKAIMPNLSAGMKVYFY
Ga0307276_101448312	3300028705	Soil	DLSENKITLDGGALILSAKTANDSTPIPPGSLRIPLEDMKAIMPNLSAGMKVYFY
Ga0307311_100939021	3300028716	Soil	SDSAPPAAIPRGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0307280_101765602	3300028768	Soil	QAPSEASDAPPAAIPRGERTVAALSDTKITLDGGTQILSTPSAQLANDSTAIPPGSLRISLEDMKAIMPNLNAGMKVYFY
Ga0307299_101001342	3300028793	Soil	ITLDGGAYILSSKTASLANDSTAIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0307284_104306341	3300028799	Soil	ITLDGGAYILSSKNANDSTPIPPGSLRIPLEDMKAIMPNLSAGMKVYFY
Ga0307292_101089962	3300028811	Soil	RGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0307302_101069104	3300028814	Soil	DGGTYILAAKAANAANDSTPIPPGSLRVGIEDMKAIMPNLKTGMKVYFY
Ga0307310_100403303	3300028824	Soil	ERGAAESDSAPPAAIPRGERTVADLTDTKITLDGGAYILSSESKQVANDSTPIPAGSLRISLEDMKAIMPNLKAGMKVYFY
Ga0307300_101631072	3300028880	Soil	RGERTVAELSEGKITLDGGTSILTSPGTLANDSTPIPPGSLRITLEDMKAIRPNLNAGMKVYFY
Ga0307304_100379633	3300028885	Soil	PVQFGPERGVSASDSAPPAAIPRGERTVAELSDTRITLDGGTSILTSPTSLASDSTPIPPGSLRISLEDMKAIKPNLNAGMKVYFY
Ga0307502_101252582	3300031164	Soil	LSDTKITLDGGTQILTSTSTQLANDSTPIPPGSLRISIEDMKAIKPNLNAGMKVYFY
Ga0170824_1030455982	3300031231	Forest Soil	FGPEQAPSETSDAPPAAIPRGERTVAALSDTKITLDGGTQILSTTSAQLASDSTAIPPGSLRISLEDMKAIMPNLNAGMKVYFY
Ga0170824_1033309792	3300031231	Forest Soil	DTSSAPPAAIPRGERTIADLSDTKITLDGGAFIFTSQTPKLESDTSQVPAGSLRIALEDMQAIKPNLSAGMKVYFY
Ga0307471_1021906921	3300032180	Hardwood Forest Soil	PRGERTVADLSDTKITLDGGTQILSSQSEDLANDSTPVPPGSLRIRREDMNAIMPNLSAGMKVYFY
Ga0373948_0081229_535_738	3300034817	Rhizosphere Soil	PEAIPRGERTIADLSDTRTVLDGGTQILSTNSANDSTPVPPGSLRISSDDMKAIMPNLSAGMKVYFY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066861

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences