NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F066816

Metagenome / Metatranscriptome Family F066816

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066816
Family Type Metagenome / Metatranscriptome
Number of Sequences 126
Average Sequence Length 73 residues
Representative Sequence GERPYWWQDDDLAVQARYASDVLESALDALAQLPGADEGELRAGLRDLRALVDRPGAGLGWVVHKSTAVH
Number of Associated Samples 108
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.41 %
% of genes from short scaffolds (< 2000 bps) 91.27 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (66.667 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.873 % of family members)
Environment Ontology (ENVO) Unclassified
(27.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.619 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.78%    β-sheet: 12.24%    Coil/Unstructured: 48.98%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.82.1.1: ALDH-liked1uxta_1uxt0.70209
c.82.1.0: automated matchesd4dnga_4dng0.69212
c.82.1.0: automated matchesd4i9ba_4i9b0.68428
c.82.1.0: automated matchesd4nmka_4nmk0.68218
c.82.1.1: ALDH-liked2bjka_2bjk0.68156


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF16655PhoD_N 5.56
PF01872RibD_C 4.76
PF11799IMS_C 3.97
PF09579Spore_YtfJ 2.38
PF00211Guanylate_cyc 2.38
PF03176MMPL 2.38
PF05988DUF899 2.38
PF06197DUF998 1.59
PF08241Methyltransf_11 1.59
PF13450NAD_binding_8 1.59
PF04828GFA 1.59
PF00296Bac_luciferase 1.59
PF02368Big_2 0.79
PF03734YkuD 0.79
PF13714PEP_mutase 0.79
PF13289SIR2_2 0.79
PF14535AMP-binding_C_2 0.79
PF03741TerC 0.79
PF03706LPG_synthase_TM 0.79
PF03575Peptidase_S51 0.79
PF00990GGDEF 0.79
PF02518HATPase_c 0.79
PF12704MacB_PCD 0.79
PF01391Collagen 0.79
PF13669Glyoxalase_4 0.79
PF01047MarR 0.79
PF00089Trypsin 0.79
PF14333DUF4389 0.79
PF00266Aminotran_5 0.79
PF13518HTH_28 0.79
PF00392GntR 0.79
PF07992Pyr_redox_2 0.79
PF00486Trans_reg_C 0.79
PF00440TetR_N 0.79
PF05977MFS_3 0.79
PF09423PhoD 0.79
PF14062DUF4253 0.79
PF01569PAP2 0.79
PF00583Acetyltransf_1 0.79
PF12802MarR_2 0.79
PF00708Acylphosphatase 0.79
PF00196GerE 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 4.76
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 4.76
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 2.38
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 2.38
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 2.38
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 2.38
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.59
COG3371Uncharacterized membrane proteinFunction unknown [S] 1.59
COG3791Uncharacterized conserved proteinFunction unknown [S] 1.59
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.79
COG0861Tellurite resistance membrane protein TerCInorganic ion transport and metabolism [P] 0.79
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.79
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.79
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.67 %
UnclassifiedrootN/A33.33 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003373|JGI25407J50210_10030670All Organisms → cellular organisms → Bacteria → Terrabacteria group1392Open in IMG/M
3300004114|Ga0062593_102580060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia577Open in IMG/M
3300004157|Ga0062590_100191739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1464Open in IMG/M
3300004643|Ga0062591_100184500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1509Open in IMG/M
3300005179|Ga0066684_10130821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1573Open in IMG/M
3300005179|Ga0066684_10964573All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005328|Ga0070676_11022761All Organisms → cellular organisms → Bacteria → Terrabacteria group621Open in IMG/M
3300005332|Ga0066388_103321145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia822Open in IMG/M
3300005343|Ga0070687_100674218All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300005440|Ga0070705_100382594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1036Open in IMG/M
3300005441|Ga0070700_100964931Not Available698Open in IMG/M
3300005455|Ga0070663_102067600All Organisms → cellular organisms → Bacteria → Terrabacteria group513Open in IMG/M
3300005471|Ga0070698_101076555Not Available752Open in IMG/M
3300005558|Ga0066698_10500444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chromofuscus826Open in IMG/M
3300005560|Ga0066670_10401889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria840Open in IMG/M
3300005569|Ga0066705_10932506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300005587|Ga0066654_10153990All Organisms → cellular organisms → Bacteria → Terrabacteria group1169Open in IMG/M
3300005614|Ga0068856_102272042Not Available551Open in IMG/M
3300005713|Ga0066905_100349251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1181Open in IMG/M
3300005713|Ga0066905_101935442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidithrix → Acidithrix ferrooxidans546Open in IMG/M
3300005937|Ga0081455_10413795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium932Open in IMG/M
3300006028|Ga0070717_10253620Not Available1555Open in IMG/M
3300006028|Ga0070717_12132394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14504Open in IMG/M
3300006358|Ga0068871_101219435All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300006755|Ga0079222_12384361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia530Open in IMG/M
3300006844|Ga0075428_100016981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8040Open in IMG/M
3300006844|Ga0075428_100050348All Organisms → cellular organisms → Bacteria4569Open in IMG/M
3300006847|Ga0075431_101768490All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300006852|Ga0075433_11847738All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300006853|Ga0075420_101245885Not Available639Open in IMG/M
3300006854|Ga0075425_102829466Not Available533Open in IMG/M
3300006880|Ga0075429_101959102Not Available507Open in IMG/M
3300006881|Ga0068865_101463943All Organisms → cellular organisms → Bacteria → Terrabacteria group611Open in IMG/M
3300006894|Ga0079215_11144945Not Available587Open in IMG/M
3300009012|Ga0066710_101347595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1107Open in IMG/M
3300009094|Ga0111539_10534069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1366Open in IMG/M
3300009098|Ga0105245_10049735All Organisms → cellular organisms → Bacteria3755Open in IMG/M
3300009100|Ga0075418_12590213Not Available554Open in IMG/M
3300009147|Ga0114129_10277207All Organisms → cellular organisms → Bacteria2241Open in IMG/M
3300009147|Ga0114129_13212160All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300009156|Ga0111538_10312247All Organisms → cellular organisms → Bacteria1989Open in IMG/M
3300009162|Ga0075423_10441832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1366Open in IMG/M
3300009162|Ga0075423_12277518Not Available589Open in IMG/M
3300009789|Ga0126307_10939081All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300009789|Ga0126307_11198978Not Available614Open in IMG/M
3300009840|Ga0126313_10230708All Organisms → cellular organisms → Bacteria1430Open in IMG/M
3300009840|Ga0126313_10387185All Organisms → cellular organisms → Bacteria → Terrabacteria group1107Open in IMG/M
3300010040|Ga0126308_10937010Not Available605Open in IMG/M
3300010041|Ga0126312_10563648All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300010042|Ga0126314_10438041All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300010042|Ga0126314_10735916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300010044|Ga0126310_10054307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2241Open in IMG/M
3300010044|Ga0126310_10666767All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300010044|Ga0126310_11841093Not Available505Open in IMG/M
3300010045|Ga0126311_10154508Not Available1637Open in IMG/M
3300010045|Ga0126311_10683756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia819Open in IMG/M
3300010045|Ga0126311_11082794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300010142|Ga0127483_1049715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.619Open in IMG/M
3300010166|Ga0126306_11291052All Organisms → cellular organisms → Bacteria → Terrabacteria group602Open in IMG/M
3300010333|Ga0134080_10425099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300010375|Ga0105239_13453297Not Available514Open in IMG/M
3300010375|Ga0105239_13496473All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300010403|Ga0134123_11891235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia652Open in IMG/M
3300012045|Ga0136623_10207675Not Available839Open in IMG/M
3300012198|Ga0137364_10166398Not Available1603Open in IMG/M
3300012212|Ga0150985_118696888All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300012356|Ga0137371_11246640Not Available553Open in IMG/M
3300012357|Ga0137384_10997811Not Available673Open in IMG/M
3300012360|Ga0137375_10389061All Organisms → cellular organisms → Bacteria → Terrabacteria group1223Open in IMG/M
3300012398|Ga0134051_1075955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.648Open in IMG/M
3300012403|Ga0134049_1205912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300012897|Ga0157285_10216002Not Available611Open in IMG/M
3300012915|Ga0157302_10036744Not Available1323Open in IMG/M
3300012977|Ga0134087_10283775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chromofuscus770Open in IMG/M
3300012987|Ga0164307_11528863Not Available564Open in IMG/M
3300013105|Ga0157369_11295319Not Available743Open in IMG/M
3300013296|Ga0157374_12552422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300014487|Ga0182000_10407468Not Available605Open in IMG/M
3300015357|Ga0134072_10332973Not Available577Open in IMG/M
3300015371|Ga0132258_12049266All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300015372|Ga0132256_101774419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria725Open in IMG/M
3300018052|Ga0184638_1121774All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300018056|Ga0184623_10244420Not Available820Open in IMG/M
3300018081|Ga0184625_10649959Not Available511Open in IMG/M
3300018422|Ga0190265_11863126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium709Open in IMG/M
3300018431|Ga0066655_10447793All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300018468|Ga0066662_12056147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inositola598Open in IMG/M
3300018468|Ga0066662_12143163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300018469|Ga0190270_12845447Not Available546Open in IMG/M
3300018481|Ga0190271_10093188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2748Open in IMG/M
3300018481|Ga0190271_12669155Not Available599Open in IMG/M
3300019458|Ga0187892_10352922Not Available715Open in IMG/M
3300022756|Ga0222622_10060711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2180Open in IMG/M
3300025324|Ga0209640_10028360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4882Open in IMG/M
3300025918|Ga0207662_11062687Not Available575Open in IMG/M
3300025935|Ga0207709_10248494Not Available1298Open in IMG/M
3300025938|Ga0207704_11600024All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300025949|Ga0207667_11245829Not Available722Open in IMG/M
3300026023|Ga0207677_11435877All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300026078|Ga0207702_10343982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1425Open in IMG/M
3300026547|Ga0209156_10348158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces chromofuscus643Open in IMG/M
3300027479|Ga0207636_1000446Not Available1070Open in IMG/M
3300028589|Ga0247818_10360831All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300028712|Ga0307285_10137948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium663Open in IMG/M
3300028713|Ga0307303_10104460All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300028714|Ga0307309_10127173Not Available629Open in IMG/M
3300028717|Ga0307298_10256395Not Available520Open in IMG/M
3300028744|Ga0307318_10352695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300028778|Ga0307288_10000138All Organisms → cellular organisms → Bacteria25915Open in IMG/M
3300028784|Ga0307282_10660413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium507Open in IMG/M
3300028787|Ga0307323_10358454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300028803|Ga0307281_10116183All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300028828|Ga0307312_10019169All Organisms → cellular organisms → Bacteria3880Open in IMG/M
3300028884|Ga0307308_10554213Not Available551Open in IMG/M
3300030511|Ga0268241_10181595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300030993|Ga0308190_1175995Not Available525Open in IMG/M
3300031099|Ga0308181_1174809Not Available516Open in IMG/M
3300031229|Ga0299913_11362041All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium665Open in IMG/M
3300031229|Ga0299913_11387497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → unclassified Nitratireductor → Nitratireductor sp. XY-223658Open in IMG/M
3300031911|Ga0307412_11144521Not Available694Open in IMG/M
3300031911|Ga0307412_12011758All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300031995|Ga0307409_100032832Not Available3770Open in IMG/M
3300032126|Ga0307415_101455083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium654Open in IMG/M
3300033551|Ga0247830_11544314Not Available531Open in IMG/M
3300034149|Ga0364929_0241483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300034151|Ga0364935_0161901All Organisms → cellular organisms → Bacteria711Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil11.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.97%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.17%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.38%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.59%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.59%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.59%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.79%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.79%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.79%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.79%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25407J50210_1003067023300003373Tabebuia Heterophylla RhizosphereADAGFRQIDEGARPQWWEGGDLAMQANYAADVMESAVDALVQAPGATDGEIRAGLADLRRLADIPGAGLGWVLHKSTASR*
Ga0062593_10258006023300004114SoilYWWQGEDLAGQARYAAEVLESALDALLQLPGNDEAELRAGLTDLRALPERPGAGLGWVVHKSTAVR*
Ga0062590_10019173923300004157SoilFREVDEGERRYWWQGEDLAGQARYAAEVLESALDALLQLPGNDEAELRAGLTDLRALPERPGAGLGWVVHKSTAVR*
Ga0062591_10018450043300004643SoilEDLANQANYAADVMESALPALAELPGVREDELHAGLADLRGLASAPGAQLGWVVHKSTGRR*
Ga0066684_1013082143300005179SoilLREAGFRDVDEGERPYSFEGDDLAHQASYAADVMESALPALVQRLGADDDVLRAGLAGLRNLPSVPDARLGWVVHKSTAAH*
Ga0066684_1096457323300005179SoilREAGFSDVDEGQRPYAFRNGDLAHQASYAAEVMESALPALVQLLGADEHELRAGLANLRDLPNVPDARLGWVVHKSTGKR*
Ga0070676_1102276123300005328Miscanthus RhizosphereEELANQAFYAADVIESALDALARLPGADELELSAGLEDLRGLATQPDAGLGWVVHKSTAVR*
Ga0066388_10332114523300005332Tropical Forest SoilIDEGERTFWWQGQDLAGQARYAADVLESALDALLRLPGSVEEELRAGLEDLRRLETQRGAGLGWVMHKSTARR*
Ga0070687_10067421833300005343Switchgrass RhizosphereDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGAPGAGLGWVVHKSTGSKPSGG*
Ga0070705_10038259413300005440Corn, Switchgrass And Miscanthus RhizosphereGKRPFWWRDDDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGTPGAGLGWVVHKSTGSKPSGG*
Ga0070700_10096493123300005441Corn, Switchgrass And Miscanthus RhizosphereRPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0070663_10206760023300005455Corn RhizosphereGQATYAADVLESALDALVALPGADEDQLHVGLRDLRALPGRSRASLGWVVHKSTGRKPVSERQAPQ*
Ga0070698_10107655513300005471Corn, Switchgrass And Miscanthus RhizosphereDEGERPFLFRDEDLANQARYAADVMESALPALTELPGSSEGELQTGLADLRALANAPDAQLGWVVHKSTAKR*
Ga0066698_1050044423300005558SoilWWQDQDLLGQANYAADVMESALPALAQLPGADQEELRAGLTDLRDLASQPDAGLGWVVHKSTAVR*
Ga0066670_1040188943300005560SoilDEDLAGQANYAADVLESALAALAALPGADEEQLRLGLADLRSLPGRPAAGLGWVVHKSTGVKPAGSVSL*
Ga0066705_1093250623300005569SoilWLHEAGFRAIDEGERTFWWQHQDLAGQASYAADVLESALPALTQLPGAAQEELQAGLQDLRNLASQPNAGLGWVVHKSTAVR*
Ga0066654_1015399053300005587SoilGQANYAADVLESALAALAALPGADEEQLRLGLADLRSLPGRPAAGLGWVVHKSTGVKPAGSVSL*
Ga0068856_10227204223300005614Corn RhizosphereSYWWRDEDLAGQARYAADVLESALDALAQLGSADEQELRAGLRDLRALPSQPGAGLGWVVHKSTAVKPAAP*
Ga0066905_10034925133300005713Tropical Forest SoilWLREAGFRELDEGERTYWWQGEDLARQANYAADVMESALDALAQLPGVEEEELRAGLEDVRALASQPGAGLGWTLHKSTAVR*
Ga0066905_10193544223300005713Tropical Forest SoilGERPYWWQDDDLAVQARYASDVLESALDALAQLPGADEGELRAGLRDLRALVDRPGAGLGWVVHKSTAVH*
Ga0081455_1041379513300005937Tabebuia Heterophylla RhizosphereDDLATQARYAADVLESALDAPDVTEELRRGLEDLRSLPTLPGAGLGWVMHKSTAVR*
Ga0070717_1025362023300006028Corn, Switchgrass And Miscanthus RhizosphereFHDIDPGERPFWWQGDDLAAEANYAADVIESALPALAQLPGTDEEQLRTGLAHLRSLPGRLGAGLGWVVHKSTGTR*
Ga0070717_1213239423300006028Corn, Switchgrass And Miscanthus RhizosphereGFREIDEGERTFRWQAEDLEGQARYAADVMESALPSLTQLPGAVEEELRAGLADLRSLPSQPGATLGWIVHKSTATR*
Ga0068871_10121943533300006358Miscanthus RhizosphereDDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGTAGAGLGWVVHKSTGSKPSGG*
Ga0079222_1238436123300006755Agricultural SoilPFWWRDDDLAGQANYAADVLESALGALAALPGTDEAQLRQGLVDLRSLPGRPGAGLGWVVHKSTGLKPG*
Ga0075428_10001698113300006844Populus RhizosphereFWWRDADLASQSRYAADVIESALDALMQLPGTDEEELRAGLEDLRRLPESPRGGLGYVMHKSTAVR*
Ga0075428_10005034843300006844Populus RhizosphereDDLERQASYAADVVESAAPALAQLPGVSEEELHTGLADLRELPSHPGAGLGWTLHKSTAVR*
Ga0075431_10176849013300006847Populus RhizosphereFWWQNEDLSSQASYAADVIESALAQPPGDEDEELRAGLEDLRSLAGHPGAGLGWTLHKSTAVR*
Ga0075433_1184773823300006852Populus RhizosphereFWWQGDDLAGQAVYAAEVLESAFDALAALPGADEEQLRAGLEDLRGLRDQPGAGLGWIVHKSTAVR*
Ga0075420_10124588523300006853Populus RhizosphereADLASQSRYAADVIESALDALMQLPGTDEEELRAGLEDLRRLPESPRGGLGYVMHKSTAVR*
Ga0075425_10282946613300006854Populus RhizosphereAGFRDVEEGERPFVFEDEDLAHQARYAADVMESALEALAGLPGASEEELRAGLADLRDLPSLPEARLGWVIHKSTGRR*
Ga0075429_10195910223300006880Populus RhizosphereFREVDEGERPFWWEGEELAHEASYAADVMESALGALAGLPGTSESELRVGLADLRALPRQPDAGLGWTVHKSTAVR*
Ga0068865_10146394323300006881Miscanthus RhizosphereGERPFWWQGEELANQAFYAADVIESALDALARLPGADELELSAGLEDLRGLATQPDAGLGWVVHKSTAVR*
Ga0079215_1114494513300006894Agricultural SoilQGEDLAAQASYAADVIESALPSLAQLPGTEEGELRAGLEHLRSLRTRPGAGLGWVVLKSTAAR*
Ga0066710_10134759513300009012Grasslands SoilDEGERPYAFRNDDLAHQASYAAEGMESALPALVQLLGADEHELSAGLADLRNLPSVPDARLGWVVHKSTGKR
Ga0111539_1053406913300009094Populus RhizosphereEAGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDRPGAGLGWVVHRSTAVR*
Ga0105245_1004973553300009098Miscanthus RhizosphereLREIGFQHVEEGERPFWWQGEELANQAFYAADVIESALDALARLPGADELELSAGLEDLRGLATQPDAGLGWVVHKSTAVR*
Ga0075418_1259021323300009100Populus RhizosphereEAGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0114129_1027720733300009147Populus RhizosphereDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0114129_1321216023300009147Populus RhizosphereGWLTAAGFREIDEGARTFWWTDADLASQASYAADVMESALDALARLPGSSEEELRTGLEDLRNLARLPGAGLGWTLHKSTAVC*
Ga0111538_1031224713300009156Populus RhizosphereEAGFGDVDEGERPYWWQNDDLAMQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0075423_1044183213300009162Populus RhizosphereKAGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDRPGAGLGWVVHRSTAVR*
Ga0075423_1227751813300009162Populus RhizosphereKAGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0126307_1093908123300009789Serpentine SoilWLRDGGFRDVDEGERTYCWRDEDLASQSRYAADVIESALDALAEQPGASEGELRRGLADLRELPNQPDAGLGWVMHKSTATR*
Ga0126307_1119897823300009789Serpentine SoilGERPFWWQGADAAREAHYAANVMESAVDALVQLPGVDVADLRAGLADLGELPNRRGAGLGWVVHKSKAVR*
Ga0126313_1023070833300009840Serpentine SoilEDLASQAAYAADVMESALPVLAQLPGVAEDEVRAGLADLRNLEAQPDARLGWVVHKSTATR*
Ga0126313_1038718523300009840Serpentine SoilPFWWQGDDLAGQARYAADVMESALDVLAQLPGAEEDELRAGLDDLRGLASRPGGGLGWVVHKSTAVR*
Ga0126308_1093701013300010040Serpentine SoilREIDDGERPVWWQGDELPGQASYAADVIESALGALVQLPGTRADQLRAGLAELRALPRQADAGLGWAIHKSTAIR*
Ga0126312_1056364823300010041Serpentine SoilFWWHDEDLASQAAYAADVMESALPVLAQLPVVAEDEVRAGLTDLRNLEAQPDARLGWVVHKSTATR*
Ga0126314_1043804113300010042Serpentine SoilREAGFRDVEEGERSFWWQDEDLVGHARYAADVIESALDALAQQPGAGEEELRAGLADLRELPNRPGAGLGWVMHKSTAAR*
Ga0126314_1073591623300010042Serpentine SoilQDEDLVSQALYAADVVESALGALAELPGTDEEELRTGLEDLRSLARRPGAGLGWTLHKSTALR*
Ga0126310_1005430733300010044Serpentine SoilPRWLREAGFRDVDEGERPYWWQDDDLAVQARYAADVLDSALDALAQLPGTDEGELRAGLGDLRALVDRPGAGLGWVVHKSSAVR*
Ga0126310_1066676723300010044Serpentine SoilGERPFWWHDEDLASQAHYAADVIESALDALAQLPDTNEGELRAGLADLRRLPGEPGAGLGWVMHKSTGLR*
Ga0126310_1184109313300010044Serpentine SoilEDLAAQAGYAADVLESALGALAALPGTDEGRLREGLDDLRSLPGRPAAGLGWVVHKSTGGKPVIERAD*
Ga0126311_1015450813300010045Serpentine SoilAFGRLRSKLIVTEVGVVSIDEGERTFWWQDEDLAGQAAYAADVIESAVDALAQLPDTVEEELRTGLEDLRSLRRRADAGLGWTMHKSTALR*
Ga0126311_1068375623300010045Serpentine SoilAGFEKVDEGERAFWWRGEELRRHAVYAADVLESATDALIRLPDMRADELRVGLADLRALPGRSGAGLGWVVHKSTGITLA*
Ga0126311_1108279423300010045Serpentine SoilREVDEGERPYWFEDEELGHQANYAADVLESALDALAQAPGADEDQLRAGLADLRGLPEKPGAGLGWVYHKSTAVR*
Ga0127483_104971513300010142Grasslands SoilPDLRGQARYAADVIESALPALAQLPGAAEEELRAGLRDLRDLATHPDAGLGWVMHKSTAMR*
Ga0126306_1129105213300010166Serpentine SoilREVDEGERSVWWQDDDLERQAGYVADVMESAIDALVQLPGIAEEELRAGLVDLRGLAHRPGAGLGWVMHKSTAHP*
Ga0134080_1042509923300010333Grasslands SoilWLEAAGFEQVDAGERSFLFQDDELAYESRYAADVMESALGGLTQLPGASEEELHAGLADLRDLPNVPRARLGWVVHKSTGRR*
Ga0105239_1345329723300010375Corn RhizosphereGFDDVVEGERPFWWRDDDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGTPGAGLGWVVHKSTGSKPTGG*
Ga0105239_1349647323300010375Corn RhizosphereLREAGFRNIDEGEHRFWWQAADLERQADYAADVMESAMDALASQPGAEEAQLRKGLSDLRGLARQPRAGLGWVVHKSTAVR*
Ga0134123_1189123513300010403Terrestrial SoilVGSSPRSAAGFQEIDEGERPFWWTDADLAGQALYAADVLESALDALARLPGASEHELRAGLDDLRALPRLPGAGLGWVVHKSTARR*
Ga0136623_1020767513300012045Polar Desert SandGEDLAGQATYAADVMESALDSLAQLPGTSRAELRRGLDDLRSLPSQPNASLGWVMHKSTAIR*
Ga0137364_1016639843300012198Vadose Zone SoilEGQRPYAFRNGDLAHQSSYAAEVMESALPALVQLLGADEHELSAGLADLRDLPSVPDARLGWVVHKSSARS*
Ga0150985_11869688823300012212Avena Fatua RhizosphereLAGQANYAADVLESALSALVALPGTNEVQLREGLQDLRSLPALPAAGLGWIVHKSTGTKPVTG*
Ga0137371_1124664013300012356Vadose Zone SoilEGERPFDWREKDLAGQAGYAADVIESALPSLAQLPGAAEEELHAGLADLRRLPDHPRGGLGWVVHKATAVR*
Ga0137384_1099781123300012357Vadose Zone SoilEAGERPFLFQDEDLAVESRYAAEVIESALPALTRLPGASEEELRAGLADLRDLPNVPSARLGWVVHKSTGRR*
Ga0137375_1038906123300012360Vadose Zone SoilDAGFRGVNEGERPFSWQGEDLAGQANYAAAVMESALDSLAQLPGTSREELRRGLGDLRSLPNQPSASLGWLMHKSWAIR*
Ga0134051_107595523300012398Grasslands SoilWWRARDLRGQARYAADVIESALPALAQLPGAAEEELRAGLKDLRDLVSHPDAGLGWVMHKSTAMR*
Ga0134049_120591223300012403Grasslands SoilGERTFWWRARDLWGQARYAADVIESALPALAQLPGAAEEELRAGLKDLRDLVSHPDAGLGWVMHKSTAMR*
Ga0157285_1021600223300012897SoilGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0157302_1003674413300012915SoilREAGFGDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG*
Ga0134087_1028377513300012977Grasslands SoilEAGFRAIDEGERTFWWQHQDLAGQASYAADVLESAVPALTQLPGAAQEELQAGLQDLRNLASQPNAGLGWVVHKSTATR*
Ga0164307_1152886323300012987SoilFWWRDEELAGQANYAADVLESALGALAVLPGTDEEELRLGLQDLRSLPGQPGAGLGWVVHKSTGVK*
Ga0157369_1129531913300013105Corn RhizospherePFWWQDDDLASQSSYAADVIESALPALAALPATDEEQLRLGLRDLRSLPSMPKAGLGWVVHKSTGARPAVPVARL*
Ga0157374_1255242213300013296Miscanthus RhizosphereGFVDVVEGERPFWWRDDDLAGQASYAADVLESALDALPGDEKQLRAGLRDLRSLPATPGAGLGWVVHKSTGVNRG*
Ga0182000_1040746823300014487SoilDLAGQANYAADVIESALPALAQLPGAGEGDLRAGLRDLRNLANQPNAGLGWVVHKSTAVAR*
Ga0134072_1033297313300015357Grasslands SoilRTFWWRARDLRGQARYAADVIESALPALAQLPGAAEEELRAGLKDLRDLVSHRDAGLGWVMHKSTAMR*
Ga0132258_1204926623300015371Arabidopsis RhizosphereDEGERPFWWQGRELAHEASYAADVMESALGALAGLPGTSESELRVGLADLRALPRRPDAGLGWTVHKSTAVR*
Ga0132256_10177441923300015372Arabidopsis RhizosphereFRDVVEGERPYWWRADDLAVQSRYAADVLESALDALVELPGGDRGELRAGLADLRALPTQPGAGLGWIVHKSTAAR*
Ga0184638_112177423300018052Groundwater SedimentWQNEDLAGQARYAADVIESALDALARLPGVSEKELRAGLEDLRTLPSRPGAGLGWIMHKSAAVR
Ga0184623_1024442013300018056Groundwater SedimentLGEAGFREIDEGKRAFWWQDEDLAGQARYAADVIESALDALVELPGAAEEELRTGLQDLRSLPRRPGAGLGWVLHKSTALG
Ga0184625_1064995913300018081Groundwater SedimentHELASEAPYAADVIESAFDALKQIPGADEDELHAGLAHLRKLPAHGGAGLGWVVHKATATRVDRGSYA
Ga0190265_1186312623300018422SoilEAGFREVDEGERTFWWQEEDLAKQAPYAADVLESALDALAQLPGAREEELRAGLEDLRNLASRPNAGLGWVVHKAAGWRPSSSPSRT
Ga0066655_1044779313300018431Grasslands SoilVDEGQRPYAFRNGDLAHQASYAAEVMESALPALVQLLGADEHELRAGLADLRDLPNVPDARLGWVVHKSTGKR
Ga0066662_1205614723300018468Grasslands SoilRAIDEGERTFWWQHQDLAGQARYAADVLESAVPALTQLPGAAQEELQAGLQDLRNLASQPNAGLGWVVHKSTATR
Ga0066662_1214316313300018468Grasslands SoilGEDLSGQARYAADVMESALPALAQLPGADEEELRAGLHDLRNLAGQPDAGLGWILHKSTATR
Ga0190270_1284544723300018469SoilEGERPYWFEDEELGHQAHYAADVLESALDALVEVPGIDEDQLRAGLADLRGLPEKPGAGLGWVYHKSTAVR
Ga0190271_1009318813300018481SoilQGEDLATEAAYAADVIESALPALVQLPGTSEDELRAGLEHLRRLPGHPDARLGWVVHKSTAAR
Ga0190271_1266915523300018481SoilDVDEGERVFWWQGEELAGQARYAADVIESALDALARLPGASEEELRSGLLDLRGLAGRPGAGLGWTMHKSTAVRAAPG
Ga0187892_1035292223300019458Bio-OozeFREIDEGERTFWWRDEDLVSQARYAADVIESALAELPRGAAEELRAALEDLRSLPRQPGAGLGWVMHKSTAVR
Ga0222622_1006071113300022756Groundwater SedimentERPFWWHDEDLAGQANYAADVLESALDTLAALPGTDEEELRVGLQDLRSLPGRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0209640_1002836013300025324SoilELAGFREIDPGERLFWWQEEELAGQASYAADVIESAFPSLAQLPGAVEEELSAGLADLRRLPSRPGAGLGWVVHKSTARNAL
Ga0207662_1106268713300025918Switchgrass RhizosphereRPFWWRDDDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGAPGAGLGWVVHKSTGSKPTGG
Ga0207709_1024849413300025935Miscanthus RhizosphereEGERTFWWRDADLDSQARYAADVIESALDALVQLPGTDEGELRAGLADLRTLSGLPGAGLGYVMHKSTARR
Ga0207704_1160002423300025938Miscanthus RhizosphereGEELANQAFYAADVIESALDALARLPGADELELSAGLEDLRGLATQPDAGLGWVVHKSTAVR
Ga0207667_1124582913300025949Corn RhizosphereDVDEGERPYWWQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRELRALVDQPGAGLGWVVHKSTAVANHLRLG
Ga0207677_1143587723300026023Miscanthus RhizosphereDDVVEGKRPFWWRDDDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPGTPGAGLGWVVHKSTGSKPSGG
Ga0207702_1034398243300026078Corn RhizosphereDLAGQASYAADVLESALGALAELPGTDEAQLRQGLEDLRSLPRTPGAGLGWVVHKSTGSKPSGG
Ga0209156_1034815823300026547SoilRPFWWQDQDLLGQANYAADVMESALPALAQLPGADQEELRAGLTDLRDLASQPDAGLGWVVHKSTAVR
Ga0207636_100044623300027479SoilQNDDLAVQASYAADVIESALDALAQLPGADEGELRAGLRDLRALVDQPGAGLGWVVHKSTAVANHLRLG
Ga0247818_1036083113300028589SoilGERPFWWQSDEVAREAPYAADVAESALDALLQLPGTDEGELRAGLADLRTLPQQPGAGLGWVVHKSTAVR
Ga0307285_1013794823300028712SoilEGERPFWWQGEDLSREAQYAADVLESALSAIAQLPGVAEEELRAGLEDLRHLADQPGAGLGWVVHKSTAVR
Ga0307303_1010446023300028713SoilEGERRFWWQDETLAGQALYAADVIESALDALAELPGTDEQELLVGLEDLRSLPSKPGAGLGWVVHKSTGLR
Ga0307309_1012717313300028714SoilGFENVVEGERPFWWHDEDLAGQANYAAEVLESALDTLAALPGTDEEELRVGLQDLRSLPGRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0307298_1025639523300028717SoilGERPFWWQDEDLSSQASYAADVIESALEALARLPGVMEEELRAGLADLRKLASQPGAGMGWVVHKSRAAR
Ga0307318_1035269513300028744SoilYWWTDEDLARQALYAADVVESALDALAQLPGADKEELRRGLDDMRSLADSPGAGIGWVVHKSTALR
Ga0307288_1000013813300028778SoilERPFWWHDEDLAGQANYAAEVLESALDTLAALPGTDEEELRVGLQDLRSLPGRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0307282_1066041323300028784SoilAEDLAGQAGYAADVIESALPSLAQLPATAEEELCAGLADLRALPSHRGAALGWVVHKSTAVG
Ga0307323_1035845423300028787SoilQDEDLAGQARYAADVIESALEALAQLPGVAEEELRAGLEDLRGLGSQPGAGLGWVMHKSTAAR
Ga0307281_1011618323300028803SoilPEWLEEAEFREVDAGERSFWWQSEDLDGQSSYAADVIESALPSLAQLPGADEQELRAGLHDLRGLPSHSGAGLGWVVHKSTAVR
Ga0307312_1001916963300028828SoilFWWHDEDLAGQANYAADVLESALDTLAALPGTDEEELRVGLQDLRSLPNRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0307308_1055421323300028884SoilFENVVEGERPFWWQDEDLAGQANYAADVLESALDTLAALPGTDGEQLREGLEDLRSLPGRPRAGLGWVVHKSTGAKPVRQSPLFAVSASTNQAGGCPPSA
Ga0268241_1018159523300030511SoilEDLAGQASYAADVLESALPALAALRGADEDQLRAGLQDLRSLPGLPDAGLGWVVHKSTGAKPPGG
Ga0308190_117599523300030993SoilGGRPFWWHDEDLAGQANYAAEVLESALDTLAALPGTDEEELRVGLQDLRSLPGRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0308181_117480913300031099SoilENVVEGERPFWWHDEDLAGQANYAAEVLESALDTLAALPGTDEEELRVGLQDLRSLPGRPRAGLGWVVHKSMGAKPVSGSASTNQAGG
Ga0299913_1136204123300031229SoilAAGFREVDEGERVFWWQGEDLAGQAGYAAEVIESALDALARLPGAVEEELRAGLLDLRGLAGRPGAGLGWTMHKSTAVR
Ga0299913_1138749723300031229SoilWQDADLAGQARYAADVIESALGSLAQLPGAAEPELRAGLADLRRLPTLPGAGLGWVVHKSTAVR
Ga0307412_1114452113300031911RhizosphereEGERPYWWQDDDLAVQARYAADVMESALDALARLPGIDAADLVAGLADLRRLPEQREAGLGWIVHKSIAVR
Ga0307412_1201175823300031911RhizosphereDEGERPVWWQDDELPGQANYAADVIESALDALVQLPGTSEDELRRGLADLRALPRQPSGGLGWVIHKSTATC
Ga0307409_10003283213300031995RhizosphereWQDEDLSGQANYAAEVMASALAALTQLPDVAEEELRSGLVDLRNLAGQPGAGLGWVVHKSTAVR
Ga0307415_10145508323300032126RhizosphereEGERPVWWQDDELPGQANYAADVIESALDALVQLPGASEDELRRGLADLRALPRQPSGGLGWVIHKSTATC
Ga0247830_1154431413300033551SoilECPERPFWWQGRELAHEASYAADVMESALGALAGLPGTSESELRVGLADLRALPRRPDAGLGWTVHKSTAVR
Ga0364929_0241483_2_2023300034149SedimentFWWQSEDLDGQSSYAADVIESALPSLAQLPGADEQELRTGLHDLRGLPSHSGAGLGWVVHKSTAVR
Ga0364935_0161901_476_7093300034151SedimentAVDEGERPFWWRHDELSGQARYAADVIESALPALAQLPGTDEQNLRAGLRDLRGLPTQPDAGLGWVMHKSTAVRKEA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.