NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F066811

Metagenome / Metatranscriptome Family F066811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F066811
Family Type Metagenome / Metatranscriptome
Number of Sequences 126
Average Sequence Length 51 residues
Representative Sequence MQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Number of Associated Samples 59
Number of Associated Scaffolds 126

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 70.63 %
% of genes near scaffold ends (potentially truncated) 37.30 %
% of genes from short scaffolds (< 2000 bps) 72.22 %
Associated GOLD sequencing projects 56
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (88.095 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat
(73.016 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(73.016 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 71.15%    β-sheet: 0.00%    Coil/Unstructured: 28.85%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 126 Family Scaffolds
PF00145DNA_methylase 6.35
PF01555N6_N4_Mtase 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 126 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 6.35
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.79
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.79
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.79


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A88.10 %
All OrganismsrootAll Organisms11.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002510|JGI24186J35511_1031853Not Available834Open in IMG/M
3300005240|Ga0068641_116697Not Available1029Open in IMG/M
3300005241|Ga0068642_139037All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300005242|Ga0068639_129949Not Available695Open in IMG/M
3300005242|Ga0068639_143284Not Available577Open in IMG/M
3300005243|Ga0068643_1055935Not Available527Open in IMG/M
3300005246|Ga0068638_153216Not Available576Open in IMG/M
3300005248|Ga0068636_1016018Not Available942Open in IMG/M
3300005248|Ga0068636_1038560Not Available1180Open in IMG/M
3300005248|Ga0068636_1051703Not Available952Open in IMG/M
3300005250|Ga0068635_1120329Not Available575Open in IMG/M
3300005388|Ga0068652_151753Not Available545Open in IMG/M
3300005390|Ga0068657_113246Not Available656Open in IMG/M
3300005409|Ga0068651_1001919Not Available960Open in IMG/M
3300005411|Ga0068647_1116940Not Available1410Open in IMG/M
3300005414|Ga0068646_1017793Not Available603Open in IMG/M
3300005452|Ga0068706_1034934Not Available992Open in IMG/M
3300005453|Ga0068705_10151519Not Available575Open in IMG/M
3300005490|Ga0068662_124289Not Available538Open in IMG/M
3300005492|Ga0068665_105867Not Available564Open in IMG/M
3300006363|Ga0068659_1011795Not Available774Open in IMG/M
3300006848|Ga0101768_1047390Not Available887Open in IMG/M
3300006849|Ga0102029_1042300Not Available905Open in IMG/M
3300007000|Ga0102499_1256605Not Available763Open in IMG/M
3300010023|Ga0130028_100239Not Available2876Open in IMG/M
3300010169|Ga0124929_111556Not Available656Open in IMG/M
3300010176|Ga0124933_147521Not Available632Open in IMG/M
3300010183|Ga0124919_1025113Not Available738Open in IMG/M
3300010196|Ga0124923_1158631Not Available569Open in IMG/M
3300026237|Ga0209750_1005251Not Available3635Open in IMG/M
3300026237|Ga0209750_1044618Not Available831Open in IMG/M
3300026237|Ga0209750_1070391Not Available613Open in IMG/M
3300027279|Ga0209691_1004740Not Available5719Open in IMG/M
3300027279|Ga0209691_1021476Not Available1568Open in IMG/M
3300031245|Ga0308395_1008430Not Available4290Open in IMG/M
3300031245|Ga0308395_1011708Not Available3374Open in IMG/M
3300031245|Ga0308395_1019091All Organisms → cellular organisms → Bacteria2321Open in IMG/M
3300031245|Ga0308395_1032702Not Available1521Open in IMG/M
3300031245|Ga0308395_1064779Not Available908Open in IMG/M
3300031245|Ga0308395_1088596Not Available724Open in IMG/M
3300031245|Ga0308395_1140189Not Available525Open in IMG/M
3300031508|Ga0308394_1025277Not Available1645Open in IMG/M
3300031508|Ga0308394_1032663Not Available1356Open in IMG/M
3300031508|Ga0308394_1117343Not Available528Open in IMG/M
3300031509|Ga0308399_1001358Not Available8219Open in IMG/M
3300031509|Ga0308399_1001488All Organisms → cellular organisms → Bacteria7824Open in IMG/M
3300031509|Ga0308399_1005020Not Available3981Open in IMG/M
3300031509|Ga0308399_1012307Not Available2322Open in IMG/M
3300031509|Ga0308399_1036553Not Available1140Open in IMG/M
3300031509|Ga0308399_1085737Not Available640Open in IMG/M
3300031512|Ga0308397_1106451Not Available597Open in IMG/M
3300031513|Ga0308412_1001138All Organisms → cellular organisms → Bacteria14329Open in IMG/M
3300031513|Ga0308412_1013555Not Available3700Open in IMG/M
3300031513|Ga0308412_1013760Not Available3665Open in IMG/M
3300031513|Ga0308412_1023483Not Available2512Open in IMG/M
3300031513|Ga0308412_1028662Not Available2179Open in IMG/M
3300031513|Ga0308412_1029683Not Available2127Open in IMG/M
3300031513|Ga0308412_1106528Not Available833Open in IMG/M
3300031513|Ga0308412_1143323Not Available677Open in IMG/M
3300031513|Ga0308412_1201182Not Available538Open in IMG/M
3300031514|Ga0308390_1068169Not Available840Open in IMG/M
3300031515|Ga0308396_1031998Not Available1293Open in IMG/M
3300031515|Ga0308396_1052954Not Available901Open in IMG/M
3300031516|Ga0308398_1095692Not Available653Open in IMG/M
3300031517|Ga0308392_1002061Not Available7732Open in IMG/M
3300031518|Ga0308389_1041189Not Available1341Open in IMG/M
3300031518|Ga0308389_1046096Not Available1219Open in IMG/M
3300031518|Ga0308389_1123693Not Available557Open in IMG/M
3300031568|Ga0308393_1019646Not Available1849Open in IMG/M
3300031568|Ga0308393_1027838All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300031568|Ga0308393_1125836Not Available533Open in IMG/M
3300031767|Ga0308401_1001787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5856Open in IMG/M
3300031767|Ga0308401_1005369All Organisms → cellular organisms → Bacteria3296Open in IMG/M
3300031776|Ga0308415_1001100Not Available11824Open in IMG/M
3300031776|Ga0308415_1003422All Organisms → cellular organisms → Bacteria → Terrabacteria group6196Open in IMG/M
3300031783|Ga0308418_1017814Not Available2216Open in IMG/M
3300031783|Ga0308418_1024981Not Available1714Open in IMG/M
3300031783|Ga0308418_1092866Not Available667Open in IMG/M
3300031812|Ga0308411_10022489All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300031812|Ga0308411_10110218Not Available1037Open in IMG/M
3300031812|Ga0308411_10266460Not Available558Open in IMG/M
3300031830|Ga0308409_1082580Not Available735Open in IMG/M
3300031865|Ga0308408_1021620Not Available1783Open in IMG/M
3300031865|Ga0308408_1041835Not Available1154Open in IMG/M
3300031875|Ga0308405_1005122Not Available5370Open in IMG/M
3300031878|Ga0308404_1000717All Organisms → cellular organisms → Bacteria10044Open in IMG/M
3300031878|Ga0308404_1000793All Organisms → cellular organisms → Bacteria → Terrabacteria group9547Open in IMG/M
3300031878|Ga0308404_1000862Not Available9191Open in IMG/M
3300031878|Ga0308404_1001168Not Available7859Open in IMG/M
3300031878|Ga0308404_1002567All Organisms → cellular organisms → Bacteria4992Open in IMG/M
3300031878|Ga0308404_1002859All Organisms → cellular organisms → Bacteria → Terrabacteria group4701Open in IMG/M
3300031878|Ga0308404_1027377Not Available1227Open in IMG/M
3300031948|Ga0308406_1060919Not Available826Open in IMG/M
3300031948|Ga0308406_1061801Not Available818Open in IMG/M
3300031950|Ga0308417_1004861All Organisms → cellular organisms → Bacteria8221Open in IMG/M
3300031950|Ga0308417_1011764Not Available4798Open in IMG/M
3300031950|Ga0308417_1034005Not Available2308Open in IMG/M
3300031950|Ga0308417_1041550Not Available1994Open in IMG/M
3300031950|Ga0308417_1043523Not Available1927Open in IMG/M
3300031950|Ga0308417_1062589Not Available1467Open in IMG/M
3300031950|Ga0308417_1152118Not Available760Open in IMG/M
3300031950|Ga0308417_1237888Not Available553Open in IMG/M
3300031958|Ga0308410_1100224Not Available811Open in IMG/M
3300031958|Ga0308410_1113976Not Available740Open in IMG/M
3300031966|Ga0308420_1048153Not Available1569Open in IMG/M
3300031966|Ga0308420_1075043Not Available1146Open in IMG/M
3300031966|Ga0308420_1096737Not Available956Open in IMG/M
3300031966|Ga0308420_1098271Not Available946Open in IMG/M
3300031980|Ga0308403_1013698Not Available1966Open in IMG/M
3300031980|Ga0308403_1047257Not Available903Open in IMG/M
3300031980|Ga0308403_1060072Not Available773Open in IMG/M
3300032033|Ga0308402_1014338Not Available1812Open in IMG/M
3300032033|Ga0308402_1020270Not Available1465Open in IMG/M
3300032033|Ga0308402_1063086Not Available721Open in IMG/M
3300032033|Ga0308402_1085010Not Available603Open in IMG/M
3300032034|Ga0308407_1084384Not Available664Open in IMG/M
3300032034|Ga0308407_1098413Not Available598Open in IMG/M
3300032045|Ga0308400_1000847All Organisms → cellular organisms → Bacteria10607Open in IMG/M
3300032045|Ga0308400_1021479Not Available1608Open in IMG/M
3300032049|Ga0308416_1004208Not Available4309Open in IMG/M
3300032057|Ga0308421_1080434Not Available826Open in IMG/M
3300032057|Ga0308421_1137968Not Available555Open in IMG/M
3300032057|Ga0308421_1153289Not Available514Open in IMG/M
3300033886|Ga0308413_033788Not Available1598Open in IMG/M
3300033886|Ga0308413_081467Not Available840Open in IMG/M
3300034646|Ga0372965_013592Not Available1317Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Hot Spring Phototrophic MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat73.02%
Anoxygenic And Chlorotrophic Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat23.02%
Anoxygenic And ChlorotrophicEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic3.17%
Terrestrial Hot Spring Microbial MatEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline → Terrestrial Hot Spring Microbial Mat0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002510Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012EnvironmentalOpen in IMG/M
3300005240Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0700_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005241Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0800_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005242Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005243Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0900_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005246Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005248Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1900_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005250Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1800_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005388Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005390Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005409Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005411Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005414Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_T MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005452Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaGEnvironmentalOpen in IMG/M
3300005453Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaGEnvironmentalOpen in IMG/M
3300005490Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0900_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005492Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006363Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_B MetaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006848Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500(2)_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300006849Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1600(2)_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007000Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700(2)_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010023Terrestrial hot spring microbial mat viral communities from Octopus Spring, Yellowstone National Park, Wyoming (2009) spADES assemblyEnvironmentalOpen in IMG/M
3300010169Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1800_B MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010176Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0300_B MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010183Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0700_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300010196Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1200_T MetaT (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300026237Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027279Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031245Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4EnvironmentalOpen in IMG/M
3300031508Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2EnvironmentalOpen in IMG/M
3300031509Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-60EnvironmentalOpen in IMG/M
3300031512Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8EnvironmentalOpen in IMG/M
3300031513Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayerEnvironmentalOpen in IMG/M
3300031514Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_149EnvironmentalOpen in IMG/M
3300031515Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2EnvironmentalOpen in IMG/M
3300031516Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9EnvironmentalOpen in IMG/M
3300031517Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20050624_m2EnvironmentalOpen in IMG/M
3300031518Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20040719_148EnvironmentalOpen in IMG/M
3300031568Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2EnvironmentalOpen in IMG/M
3300031767Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1EnvironmentalOpen in IMG/M
3300031776Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS55EnvironmentalOpen in IMG/M
3300031783Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cdEnvironmentalOpen in IMG/M
3300031812Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayerEnvironmentalOpen in IMG/M
3300031830Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4EnvironmentalOpen in IMG/M
3300031865Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3EnvironmentalOpen in IMG/M
3300031875Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13EnvironmentalOpen in IMG/M
3300031878Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4EnvironmentalOpen in IMG/M
3300031948Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1EnvironmentalOpen in IMG/M
3300031950Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65EnvironmentalOpen in IMG/M
3300031958Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCoreEnvironmentalOpen in IMG/M
3300031966Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS55EnvironmentalOpen in IMG/M
3300031980Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3EnvironmentalOpen in IMG/M
3300032033Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2EnvironmentalOpen in IMG/M
3300032034Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2EnvironmentalOpen in IMG/M
3300032045Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65EnvironmentalOpen in IMG/M
3300032049Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS60EnvironmentalOpen in IMG/M
3300032057Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60EnvironmentalOpen in IMG/M
3300033886Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090729_t10cdEnvironmentalOpen in IMG/M
3300034646Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0000_MSt4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24186J35511_103185323300002510Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMTDILSAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068641_11669723300005240Anoxygenic And Chlorotrophic Microbial MatVVVGDRRCLTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF*
Ga0068642_13903733300005241Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFAAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLSRIVNLF*
Ga0068639_12994923300005242Anoxygenic And Chlorotrophic Microbial MatFSAMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068639_14328413300005242Anoxygenic And Chlorotrophic Microbial MatRFSAMQFNNPPAFTAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF*
Ga0068643_105593523300005243Anoxygenic And Chlorotrophic Microbial MatTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068638_15321623300005246Anoxygenic And Chlorotrophic Microbial MatMTNDPVFQAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF*
Ga0068636_101601823300005248Anoxygenic And Chlorotrophic Microbial MatNPPAFTAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF*
Ga0068636_103856013300005248Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLSRIVNLF*
Ga0068636_105170313300005248Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF*
Ga0068635_112032923300005250Anoxygenic And Chlorotrophic Microbial MatVVSGYRRCPTPTFTAPSMNDILSAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068652_15175323300005388Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068657_11324623300005390Anoxygenic And Chlorotrophic Microbial MatMEFNNQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF*
Ga0068651_100191923300005409Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMADIMNAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF*
Ga0068647_111694033300005411Anoxygenic And Chlorotrophic Microbial MatVVSGCRRCPTPQFNAPSMADILNAATSIFNPFTGVLALAIGVTLGARMLGRIVNLF*
Ga0068646_101779313300005414Anoxygenic And Chlorotrophic Microbial MatMEFNNQPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGL*
Ga0068706_103493423300005452Anoxygenic And ChlorotrophicMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLG
Ga0068705_1015151923300005453Anoxygenic And ChlorotrophicNRRCTTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068662_12428913300005490Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVRLF*
Ga0068665_10586723300005492Anoxygenic And Chlorotrophic Microbial MatGRLSVVGDRRCPTNDPVFNAPSMTAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0068659_101179523300006363Anoxygenic And Chlorotrophic Microbial MatMEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0101768_104739023300006848Anoxygenic And Chlorotrophic Microbial MatMTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0102029_104230023300006849Anoxygenic And Chlorotrophic Microbial MatVSIRRCPTPQFNAPSMTAILEAATSIFNPFTGVLALAIGVTLGARMLGRIVNLF*
Ga0102499_125660523300007000Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFVAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF*
Ga0130028_10023923300010023Terrestrial Hot Spring Microbial MatMQFNNPPAFTAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF*
Ga0124929_11155633300010169Anoxygenic And Chlorotrophic Microbial MatMEFNNQPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF*
Ga0124933_14752113300010176Anoxygenic And Chlorotrophic Microbial MatMEFNGQPQFNAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF*
Ga0124919_102511333300010183Anoxygenic And Chlorotrophic Microbial MatCTTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF*
Ga0124923_115863133300010196Anoxygenic And Chlorotrophic Microbial MatLSVVGDRRCPTNDPVFNAPSMTAILQAATSIFNPFTGVLALAIGVTLGARMLGRIVNLF*
Ga0209750_100525133300026237Anoxygenic And Chlorotrophic Microbial MatMQFNNPPAFTAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0209750_104461813300026237Anoxygenic And Chlorotrophic Microbial MatMEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVN
Ga0209750_107039113300026237Anoxygenic And Chlorotrophic Microbial MatMQFNNSPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0209691_100474023300027279Anoxygenic And ChlorotrophicMEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0209691_102147653300027279Anoxygenic And ChlorotrophicMQFNNPPAFTAPSMADILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308395_100843063300031245Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308395_101170843300031245Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308395_101909123300031245Hot Spring Phototrophic MatMQFNNPPAFAAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLSRIVNLF
Ga0308395_103270243300031245Hot Spring Phototrophic MatMQFNNPPAFTAPSMADIMNAATSIFNPFVGVLALAIGVTLGTRMLGRIV
Ga0308395_106477913300031245Hot Spring Phototrophic MatFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308395_108859633300031245Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIG
Ga0308395_114018923300031245Hot Spring Phototrophic MatMQFNNPPSFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308394_102527713300031508Hot Spring Phototrophic MatMQFNNPPAFTAPSMADIMNAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308394_103266333300031508Hot Spring Phototrophic MatMQFNNPPAFTAASMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308394_111734313300031508Hot Spring Phototrophic MatCLTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308399_1001358123300031509Hot Spring Phototrophic MatMEFNNPPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308399_1001488143300031509Hot Spring Phototrophic MatMEFNNQPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308399_100502063300031509Hot Spring Phototrophic MatMEFNNQPQFNAPNMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308399_101230733300031509Hot Spring Phototrophic MatMEFNNQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308399_103655313300031509Hot Spring Phototrophic MatQPQFNAPNMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308399_108573723300031509Hot Spring Phototrophic MatMEFNNSPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308397_110645133300031512Hot Spring Phototrophic MatTTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_1001138223300031513Hot Spring Phototrophic MatMEFNSQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_101355523300031513Hot Spring Phototrophic MatMQFNNPPAFTAPSMADILNAATSIFNPFVSVLALAIGVTLGARMLGRIVRLF
Ga0308412_101376013300031513Hot Spring Phototrophic MatMQFNNPPTFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_102348353300031513Hot Spring Phototrophic MatMQFNNPPAFTAPSMSDILSAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_102866233300031513Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGTRMLARIVNLF
Ga0308412_102968343300031513Hot Spring Phototrophic MatLTNDPVFQAPSMSAIMQAATGIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_110652813300031513Hot Spring Phototrophic MatMQFNNPPAFTAPTMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308412_114332323300031513Hot Spring Phototrophic MatVEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGAR
Ga0308412_120118213300031513Hot Spring Phototrophic MatMEFNSQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308390_106816933300031514Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGAR
Ga0308396_103199823300031515Hot Spring Phototrophic MatMQFNNPPAFTAPSMADILNAATSIFNPFVGVLALAIG
Ga0308396_105295413300031515Hot Spring Phototrophic MatRFSAMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308398_109569213300031516Hot Spring Phototrophic MatMQFNNSPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRI
Ga0308392_100206133300031517Hot Spring Phototrophic MatMEFNSQPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308389_104118933300031518Hot Spring Phototrophic MatRCTTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308389_104609623300031518Hot Spring Phototrophic MatFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308389_112369323300031518Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDIMNAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308393_101964633300031568Hot Spring Phototrophic MatMEFNGQPQFNAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308393_102783833300031568Hot Spring Phototrophic MatMTNDPVFQAPSMSAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308393_112583613300031568Hot Spring Phototrophic MatNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308401_100178783300031767Hot Spring Phototrophic MatMEFNNPPQFNAPNMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308401_100536923300031767Hot Spring Phototrophic MatMQFNNPPAFTAPSMADILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308415_100110073300031776Hot Spring Phototrophic MatMEFNNQPVFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308415_100342273300031776Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308418_101781443300031783Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLSRIVNLF
Ga0308418_102498153300031783Hot Spring Phototrophic MatMQFNNPPAFTAPSMADIMNAATSIFNPFVGVLALAIG
Ga0308418_109286623300031783Hot Spring Phototrophic MatMTNDPVFQAPSMSAILQAATSVFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308411_1002248953300031812Hot Spring Phototrophic MatMEFNNQPQFNAPSMADILTAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308411_1011021833300031812Hot Spring Phototrophic MatVVIGDRRCLTNDPVFQAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308411_1026646013300031812Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGTRMLARIV
Ga0308409_108258023300031830Hot Spring Phototrophic MatAMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308408_102162053300031865Hot Spring Phototrophic MatMTNDPVFQAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308408_104183523300031865Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILSAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308405_100512263300031875Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAAASIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308404_100071723300031878Hot Spring Phototrophic MatMEFNGQPQFNAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308404_1000793143300031878Hot Spring Phototrophic MatMEFNNQPQFNAPNMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308404_1000862133300031878Hot Spring Phototrophic MatMEFNNQPQFNAPNMADILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308404_100116843300031878Hot Spring Phototrophic MatMQFNNPPAFTAPSMNDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308404_100256733300031878Hot Spring Phototrophic MatVEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308404_100285983300031878Hot Spring Phototrophic MatVVIGNRRCPTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308404_102737733300031878Hot Spring Phototrophic MatVVIGDRRCLTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308406_106091913300031948Hot Spring Phototrophic MatNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLSRIVNLF
Ga0308406_106180113300031948Hot Spring Phototrophic MatPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308417_100486163300031950Hot Spring Phototrophic MatMQFNNPPSFTAPSMNDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308417_101176453300031950Hot Spring Phototrophic MatMEFNNQPQFNAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308417_103400543300031950Hot Spring Phototrophic MatAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308417_104155023300031950Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLSLAIGVTLGARMLGRIVNLF
Ga0308417_104352323300031950Hot Spring Phototrophic MatMEFNSQPQFNAPNMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308417_106258933300031950Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILSAATSIFNPFVGVLALAIGVTLGTRMLARIVNLF
Ga0308417_115211823300031950Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTL
Ga0308417_123788813300031950Hot Spring Phototrophic MatFSAMEFNGQPQFSAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308410_110022413300031958Hot Spring Phototrophic MatHLVVCGLRRFSDMEFNNQPQFNAPNMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308410_111397613300031958Hot Spring Phototrophic MatMQFNNPPAFTAPSMADILNAATSIFNPFVSVLALAIGVTLGARMLG
Ga0308420_104815313300031966Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILSAATSIFNPFVGVLALAIGVTLNARMLGRIVNLF
Ga0308420_107504313300031966Hot Spring Phototrophic MatRRFSAMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308420_109673733300031966Hot Spring Phototrophic MatRRCPTPTFNAPSMTDILSAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308420_109827123300031966Hot Spring Phototrophic MatVVSGYRRCPTPQFNAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0308403_101369833300031980Hot Spring Phototrophic MatEFNSQPQFNAPNMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308403_104725723300031980Hot Spring Phototrophic MatMEFNNQPQFNAPGMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVRLF
Ga0308403_106007213300031980Hot Spring Phototrophic MatVWVCSYRRCPTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308402_101433813300032033Hot Spring Phototrophic MatEFNNQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308402_102027023300032033Hot Spring Phototrophic MatMEFNNSPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308402_106308623300032033Hot Spring Phototrophic MatMEFNNQPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGR
Ga0308402_108501023300032033Hot Spring Phototrophic MatPQFNAPGMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308407_108438443300032034Hot Spring Phototrophic MatLNRRCPTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLG
Ga0308407_109841323300032034Hot Spring Phototrophic MatVVVGDRRCLTNDPVFNAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308400_1000847143300032045Hot Spring Phototrophic MatVEFNNQPQFNAPGMTDILNAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308400_102147933300032045Hot Spring Phototrophic MatCMIALSNDPVFQAPSMSAIMQAATSIFNPFVGVLALAIGVTLGTRMLGRIVNLF
Ga0308416_100420833300032049Hot Spring Phototrophic MatMEFSNQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF
Ga0308421_108043423300032057Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVT
Ga0308421_113796813300032057Hot Spring Phototrophic MatMQFNNPPAFTAPSMTDILNAATSIFNPFVGVLALAIGVTLGA
Ga0308421_115328913300032057Hot Spring Phototrophic MatLNRRCTTNDPVFNAPSMTAILQAATSIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308413_033788_330_4883300033886Hot Spring Phototrophic MatMQFNNPPAFTAPSMADILNAAASIFNPFVGVLALAIGVTLGARMLGRIVNLF
Ga0308413_081467_264_4223300033886Hot Spring Phototrophic MatMEFNNPPAFTAPSMTDILNAATSIFNPFVSVLALAIGVTLGARMLGRIVNLF
Ga0372965_013592_923_10813300034646Hot Spring Phototrophic MatMQFNNQPQFNAPSMTDILNAATSIFNPFVSVIALAIGVTLGARMLGRIVRLF


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