Metagenome / Metatranscriptome Family F066789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066789
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	47 residues
Representative Sequence	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFETQVDFE
Number of Associated Samples	78
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.65 %
% of genes near scaffold ends (potentially truncated)	17.46 %
% of genes from short scaffolds (< 2000 bps)	62.70 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.016 % of family members)
Environment Ontology (ENVO)	Unclassified (61.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (70.635 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.90% β-sheet: 9.86% Coil/Unstructured: 73.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01844	HNH	3.97
PF13640	2OG-FeII_Oxy_3	3.97
PF04488	Gly_transf_sug	3.17
PF12849	PBP_like_2	3.17
PF01521	Fe-S_biosyn	3.17
PF01458	SUFBD	2.38
PF06067	DUF932	2.38
PF09834	DUF2061	1.59
PF00685	Sulfotransfer_1	1.59
PF14025	DUF4241	1.59
PF00692	dUTPase	0.79
PF00210	Ferritin	0.79
PF00082	Peptidase_S8	0.79
PF16861	Carbam_trans_C	0.79
PF02075	RuvC	0.79
PF01391	Collagen	0.79
PF04973	NMN_transporter	0.79
PF01370	Epimerase	0.79
PF11397	GlcNAc	0.79
PF05118	Asp_Arg_Hydrox	0.79
PF00296	Bac_luciferase	0.79
PF02675	AdoMet_dc	0.79
PF02811	PHP	0.79
PF02668	TauD	0.79
PF00356	LacI	0.79
PF13155	Toprim_2	0.79
PF00255	GSHPx	0.79
PF07733	DNA_pol3_alpha	0.79
PF02945	Endonuclease_7	0.79
PF00583	Acetyltransf_1	0.79
PF01121	CoaE	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	3.17
COG3774	Mannosyltransferase OCH1 or related enzyme	Cell wall/membrane/envelope biogenesis [M]	3.17
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	3.17
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	2.38
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.79
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.79
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.79
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.79
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.79
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.79
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.79
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	0.79
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.14 %
Unclassified	root	N/A	42.86 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	47.62 %
Unclassified	root	N/A	42.86 %
cellular organisms	root	All Organisms → cellular organisms	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	41.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	41.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	41.27 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	41.27 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	38.89 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	38.89 %
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	1.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	38.89 %
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Samistivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	38.89 %
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Streptomyces virus Jay2Jay	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.86 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	38.89 %
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	7.14 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.35 %
Streptomyces phage Jay2Jay	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10003997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5896	Open in IMG/M
3300000756\|JGI12421J11937_10021698	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2360	Open in IMG/M
3300002408\|B570J29032_109394128	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300002835\|B570J40625_100005275	Not Available	24084	Open in IMG/M
3300003395\|JGI25917J50250_1007084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2911	Open in IMG/M
3300003395\|JGI25917J50250_1051942	Not Available	873	Open in IMG/M
3300003490\|JGI25926J51410_1007307	Not Available	2303	Open in IMG/M
3300003490\|JGI25926J51410_1020569	All Organisms → Viruses → Predicted Viral	1289	Open in IMG/M
3300003490\|JGI25926J51410_1032477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	963	Open in IMG/M
3300003491\|JGI25924J51412_1012903	All Organisms → Viruses → Predicted Viral	1541	Open in IMG/M
3300003493\|JGI25923J51411_1022269	All Organisms → Viruses → Predicted Viral	1273	Open in IMG/M
3300003497\|JGI25925J51416_10035278	Not Available	1404	Open in IMG/M
3300004054\|Ga0063232_10214365	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300004096\|Ga0066177_10221037	Not Available	783	Open in IMG/M
3300004096\|Ga0066177_10371351	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617	Open in IMG/M
3300004096\|Ga0066177_10445912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300005517\|Ga0070374_10644333	Not Available	524	Open in IMG/M
3300005517\|Ga0070374_10676905	Not Available	510	Open in IMG/M
3300005580\|Ga0049083_10000760	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11887	Open in IMG/M
3300005583\|Ga0049085_10007437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4321	Open in IMG/M
3300005583\|Ga0049085_10286379	Not Available	537	Open in IMG/M
3300005584\|Ga0049082_10164945	Not Available	765	Open in IMG/M
3300005662\|Ga0078894_11449406	Not Available	572	Open in IMG/M
3300005941\|Ga0070743_10004225	Not Available	5234	Open in IMG/M
3300006484\|Ga0070744_10004995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3977	Open in IMG/M
3300006484\|Ga0070744_10005051	Not Available	3957	Open in IMG/M
3300006484\|Ga0070744_10044114	All Organisms → Viruses → Predicted Viral	1309	Open in IMG/M
3300006484\|Ga0070744_10055724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1156	Open in IMG/M
3300006484\|Ga0070744_10158417	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	648	Open in IMG/M
3300006484\|Ga0070744_10159060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	647	Open in IMG/M
3300006484\|Ga0070744_10161365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	642	Open in IMG/M
3300007559\|Ga0102828_1103222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300007559\|Ga0102828_1120159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	647	Open in IMG/M
3300007622\|Ga0102863_1121017	Not Available	769	Open in IMG/M
3300007670\|Ga0102862_1121237	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	661	Open in IMG/M
3300007974\|Ga0105747_1108719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	871	Open in IMG/M
3300007992\|Ga0105748_10508102	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300009026\|Ga0102829_1295756	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538	Open in IMG/M
3300009068\|Ga0114973_10000393	Not Available	32776	Open in IMG/M
3300009068\|Ga0114973_10337555	Not Available	798	Open in IMG/M
3300009152\|Ga0114980_10055832	Not Available	2387	Open in IMG/M
3300009152\|Ga0114980_10611921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	615	Open in IMG/M
3300009154\|Ga0114963_10023637	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4083	Open in IMG/M
3300009155\|Ga0114968_10002791	Not Available	13214	Open in IMG/M
3300009155\|Ga0114968_10018147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4888	Open in IMG/M
3300009155\|Ga0114968_10039113	Not Available	3120	Open in IMG/M
3300009155\|Ga0114968_10393325	Not Available	758	Open in IMG/M
3300009158\|Ga0114977_10597286	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	595	Open in IMG/M
3300009160\|Ga0114981_10080139	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300009181\|Ga0114969_10001418	Not Available	20367	Open in IMG/M
3300009183\|Ga0114974_10020331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4694	Open in IMG/M
3300009184\|Ga0114976_10002018	Not Available	12744	Open in IMG/M
3300010885\|Ga0133913_12192129	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1363	Open in IMG/M
3300010885\|Ga0133913_13280728	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1066	Open in IMG/M
3300013006\|Ga0164294_10700625	Not Available	684	Open in IMG/M
3300013092\|Ga0163199_1062971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1637	Open in IMG/M
3300013372\|Ga0177922_10351802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	893	Open in IMG/M
3300017761\|Ga0181356_1039929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1652	Open in IMG/M
3300019146\|Ga0188881_10053765	Not Available	501	Open in IMG/M
3300019784\|Ga0181359_1069121	Not Available	1340	Open in IMG/M
3300019784\|Ga0181359_1167141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
3300020141\|Ga0211732_1136853	Not Available	15029	Open in IMG/M
3300020141\|Ga0211732_1376574	Not Available	1048	Open in IMG/M
3300020159\|Ga0211734_10863036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	3464	Open in IMG/M
3300020160\|Ga0211733_10564397	Not Available	1128	Open in IMG/M
3300020161\|Ga0211726_10072033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3985	Open in IMG/M
3300020162\|Ga0211735_10111644	Not Available	595	Open in IMG/M
3300020172\|Ga0211729_10079684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1082	Open in IMG/M
3300020172\|Ga0211729_10528674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	5524	Open in IMG/M
3300020172\|Ga0211729_10614709	Not Available	1004	Open in IMG/M
3300020172\|Ga0211729_10796850	All Organisms → Viruses → Predicted Viral	3137	Open in IMG/M
3300020172\|Ga0211729_11225508	All Organisms → Viruses → Predicted Viral	1142	Open in IMG/M
3300020205\|Ga0211731_10564665	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	612	Open in IMG/M
3300020506\|Ga0208091_1019066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300020563\|Ga0208082_1001179	Not Available	7578	Open in IMG/M
3300021519\|Ga0194048_10014800	All Organisms → cellular organisms → Bacteria	3475	Open in IMG/M
3300021519\|Ga0194048_10038693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	1969	Open in IMG/M
3300021602\|Ga0194060_10009714	Not Available	6336	Open in IMG/M
3300021962\|Ga0222713_10104010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2030	Open in IMG/M
3300022190\|Ga0181354_1047610	Not Available	1426	Open in IMG/M
3300022553\|Ga0212124_10476267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M
3300023174\|Ga0214921_10003731	Not Available	23031	Open in IMG/M
3300023174\|Ga0214921_10274450	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	964	Open in IMG/M
3300023184\|Ga0214919_10000488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	67721	Open in IMG/M
3300024343\|Ga0244777_10944185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300024346\|Ga0244775_10015313	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7124	Open in IMG/M
3300024346\|Ga0244775_10018895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	6326	Open in IMG/M
3300024346\|Ga0244775_10029768	Not Available	4871	Open in IMG/M
3300024346\|Ga0244775_10050870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	3607	Open in IMG/M
3300024346\|Ga0244775_10110504	Not Available	2333	Open in IMG/M
3300024346\|Ga0244775_10155768	Not Available	1927	Open in IMG/M
3300024346\|Ga0244775_10247564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1486	Open in IMG/M
3300024346\|Ga0244775_10248540	All Organisms → Viruses → Predicted Viral	1482	Open in IMG/M
3300024346\|Ga0244775_10286952	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1366	Open in IMG/M
3300024346\|Ga0244775_10347589	Not Available	1225	Open in IMG/M
3300024346\|Ga0244775_10373785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1174	Open in IMG/M
3300024346\|Ga0244775_10410795	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1113	Open in IMG/M
3300024346\|Ga0244775_10528295	Not Available	962	Open in IMG/M
3300027508\|Ga0255072_1123376	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	504	Open in IMG/M
3300027586\|Ga0208966_1028249	Not Available	1640	Open in IMG/M
3300027621\|Ga0208951_1000004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	115112	Open in IMG/M
3300027631\|Ga0208133_1035827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1229	Open in IMG/M
3300027644\|Ga0209356_1119398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	756	Open in IMG/M
3300027656\|Ga0209357_1038870	Not Available	1550	Open in IMG/M
3300027656\|Ga0209357_1038948	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1548	Open in IMG/M
3300027689\|Ga0209551_1150154	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	732	Open in IMG/M
3300027689\|Ga0209551_1158979	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300027734\|Ga0209087_1000295	Not Available	33073	Open in IMG/M
3300027741\|Ga0209085_1002172	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11299	Open in IMG/M
3300027753\|Ga0208305_10130704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	928	Open in IMG/M
3300027754\|Ga0209596_1003081	Not Available	13328	Open in IMG/M
3300027759\|Ga0209296_1221548	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	796	Open in IMG/M
3300027782\|Ga0209500_10001644	Not Available	16545	Open in IMG/M
3300027797\|Ga0209107_10000474	Not Available	23387	Open in IMG/M
3300027892\|Ga0209550_10294225	Not Available	1048	Open in IMG/M
3300027892\|Ga0209550_10361150	Not Available	911	Open in IMG/M
3300027892\|Ga0209550_10372461	Not Available	893	Open in IMG/M
3300027892\|Ga0209550_10865310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300027963\|Ga0209400_1001021	Not Available	23804	Open in IMG/M
3300027971\|Ga0209401_1000559	Not Available	25223	Open in IMG/M
3300027973\|Ga0209298_10000039	Not Available	73205	Open in IMG/M
3300032092\|Ga0315905_10390282	Not Available	1310	Open in IMG/M
3300034104\|Ga0335031_0018407	Not Available	5121	Open in IMG/M
3300034104\|Ga0335031_0270887	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	73.81%
Marine	Environmental → Aquatic → Marine	26.19%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	38.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	33.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified	18.25%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.35%
Coastal	Environmental → Aquatic → Marine → Coastal	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.79%
River	Environmental → Aquatic → Freshwater → River	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	18.25%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	6.35%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.38%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	19.05%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	17.46%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.35%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	6.35%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.38%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.38%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.38%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.79%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.79%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.79%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003395	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300019146	Metatranscriptome of marine microbial communities from Baltic Sea - GS860_ls5	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_1000399712	3300000756	Freshwater And Sediment	MCDKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE*
JGI12421J11937_100216984	3300000756	Freshwater And Sediment	MSDAMCVKYGCDYQVDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE*
B570J29032_1093941282	3300002408	Freshwater	YMTCIKAGCNYELDLDGQVTCSVCGAMDDDKQPVDIFESQIDFE*
B570J40625_10000527552	3300002835	Freshwater	MTCIKAGCNYELDLDGQVTCSVCGAMDDDKQPVDIFESQIDFE*
JGI25917J50250_10070844	3300003395	Freshwater Lake	MSDAMCTKYGCDYKLDLDGQVTCSNCGAMDDDKQPVNIFESQVDFE*
JGI25917J50250_10519421	3300003395	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE*
JGI25926J51410_10073072	3300003490	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFESQVDFE*
JGI25926J51410_10205694	3300003490	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPINIDNSVFERQIDFE*
JGI25926J51410_10324773	3300003490	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAPVDFE*
JGI25924J51412_10129032	3300003491	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTTINIDNSVFERQIDFE*
JGI25923J51411_10222691	3300003493	Freshwater Lake	CDYQLDLDGQVTCAVCGAMDDDASTPINIDNSVFERQIDFE*
JGI25925J51416_100352784	3300003497	Freshwater Lake	MSDALCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE*
Ga0063232_102143652	3300004054	Freshwater Lake	MSDPVCTKYGCDYQLDLDGQVTCAICGAMDDDASTPVTLDIFEKQVDFE*
Ga0066177_102210371	3300004096	Freshwater Lake	MTCTKYGCDFEIDLDGQVTCTVCGAMDDNKQPVDIFETQTDFE*
Ga0066177_103713512	3300004096	Freshwater Lake	MSDPVCTKYGCDYQLDLDGQVTCTICGAMDDDASTPATLDIFEKQVDFE*
Ga0066177_104459122	3300004096	Freshwater Lake	MGFKMSDAMCTKYGCDYQLDLDGQVTCANCGAMDDDASTPITLDMFEAQVDFE*
Ga0070374_106443331	3300005517	Freshwater Lake	EWYDVYMTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFESQIDFE*
Ga0070374_106769051	3300005517	Freshwater Lake	MSDPVCTKYGCDYQLDLDGQVTCTICGAMDDDASTPATLDIFEKQVD
Ga0049083_1000076030	3300005580	Freshwater Lentic	MSDAICSKYGCDYQLDLDGQVTCGNCGAMDDDMPNPTNVDNLAFESQVDFE*
Ga0049085_100074374	3300005583	Freshwater Lentic	MSDAMCGKYGCDYQLDLDGQVTCANCGAMDDDASTPINIDNSVFERQIDFE*
Ga0049085_102863791	3300005583	Freshwater Lentic	MSDAICSKYGCDYQLDLDGQVTCGNCGAMDDDMPNPTNVDNLAFESQMDFE*
Ga0049082_101649453	3300005584	Freshwater Lentic	MSDALCTKYGCSYELDLDGQVTCSNCGAMDDDMLPRRTYNDNDKFETQMDFE*
Ga0078894_114494061	3300005662	Freshwater Lake	MTCIKYGCDYQLDLDGQVTCAVCGAMDDDRQPVDIFETQTDFE*
Ga0070743_100042252	3300005941	Estuarine	MTCTKYGCNYELDLDGQVTCTVCGAMDDDKQPVDIFEFQVDFE*
Ga0070744_100049953	3300006484	Estuarine	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDIQPVDIFETQTDFE*
Ga0070744_100050512	3300006484	Estuarine	MTHTCNYQLDLDGQVTCTVCGAMDDDMQSIFETQVDFE*
Ga0070744_100441142	3300006484	Estuarine	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEDQVDFE*
Ga0070744_100557241	3300006484	Estuarine	CTKYGCDYQLDLDGQVTCAICGAMDDDASTPITLDIFESQVDFE*
Ga0070744_101584172	3300006484	Estuarine	MSDAICTKYGCDYQLDLDGQITCANCGAMDDDMLPRRTYNDNDKFETQMDFE*
Ga0070744_101590601	3300006484	Estuarine	MMSMCVKYGCDFQLDLDGQVTCVACGAMDDDKQHAWEEKPDIKNILFESQVNFE*
Ga0070744_101613653	3300006484	Estuarine	QLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE*
Ga0102874_11692181	3300007546	Estuarine	MSWGILMSDAICTKYGCDYQLDLDGQVTCSNCGAMDDDMVISSNMNVNIN
Ga0102828_11032222	3300007559	Estuarine	MGFKMSDAMCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE*
Ga0102828_11201592	3300007559	Estuarine	MCVKYGCDFQLDLDGQVTCVACGAMDDDKQHAWEEKPDIKNILFESQVNFE*
Ga0102863_11210173	3300007622	Estuarine	MSDAICTKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE*
Ga0102862_11212372	3300007670	Estuarine	MSWGILMSDAICTKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE*
Ga0105747_11087192	3300007974	Estuary Water	CTKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE*
Ga0105748_105081021	3300007992	Estuary Water	MTCTKYGCDYELDLDGQVTCTVCGAMDDDMKPDIFESQIDFE*
Ga0102829_12957562	3300009026	Estuarine	AMCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE*
Ga0114973_1000039358	3300009068	Freshwater Lake	MKWYDVYMTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE*
Ga0114973_103375552	3300009068	Freshwater Lake	MTHDCNYELDLDGQVTCTLCGAMDDDMCPSGDMQSIFETQIDFE*
Ga0114980_100558325	3300009152	Freshwater Lake	MICTKYGCNYELDLDGQVTCTVCGAMDDDKQPVDIFETQTDFE*
Ga0114980_106119212	3300009152	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCSVCGAMDDDKQPVDIFEAQVDFE*
Ga0114963_1002363714	3300009154	Freshwater Lake	MTHNCTFDLDLDGQVTCTVCGAMDDDKEPNKIFEEQVDFE*
Ga0114968_100027919	3300009155	Freshwater Lake	MTHVCNYELDLDGQVTCTVCGAMDDDMSHSDDVDIFESQIDFE*
Ga0114968_100181475	3300009155	Freshwater Lake	MSDALCTKYGCDYQLDLDGQITCFNCGAMDDDMLPRRTYNDNDKFETQVDFE*
Ga0114968_100391136	3300009155	Freshwater Lake	MTHDCNYELDLDGQVTCTVCGAMDDDMCPSGDMQSIFETQIDFE*
Ga0114968_103933252	3300009155	Freshwater Lake	MTCTKYGCNYELDLDGKVTCTVCGAMDDDMSPTTLDMFEAQVDFE*
Ga0114977_105972862	3300009158	Freshwater Lake	MSNDQLCNKYGCNYELDLDGQVTCSNCGAMGDDMPNPTGIKNSAFETQVDFE*
Ga0114981_100801392	3300009160	Freshwater Lake	MTCTKYGCNYELDLDGQVTCTVCGAMDDDMSPITLDMFEAQVDFE*
Ga0114969_1000141811	3300009181	Freshwater Lake	MSDAMCTKYGCDYKLDLDGQVTCSNCGAMGDDMPNPQSADNSVFERQIDFE*
Ga0114974_100203311	3300009183	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFEAQVDFE*
Ga0114976_1000201833	3300009184	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFESQVDFE*
Ga0133913_121921291	3300010885	Freshwater Lake	MHDCNYELDLDGQVTCTVCGAMDDDASTPITLDMFEDQVDFE*
Ga0133913_132807282	3300010885	Freshwater Lake	MSDAMCTKYGCDYQLDLDGQVTCSNCGAMDDDMPNPRSIENSDFERQVDFE*
Ga0164294_107006253	3300013006	Freshwater	MFDLDLDGQVTCTVCGAMDDDKQPVDIFESQIDFE*
Ga0163199_10629712	3300013092	Freshwater	MSDAMCTKYGCDYQLDLDGQITCFNCGAMDDDMLPRRIYNENDKFESQVDFE*
Ga0177922_103518021	3300013372	Freshwater	YELDLDGQVTCTVCGAMDDDKQPVDIFEFQVDFE*
Ga0181356_10399293	3300017761	Freshwater Lake	MTCTKYGCNYELDLDGQVTCTVCGAMDDDASTPINIDNSVFERQIDFE
Ga0188881_100537652	3300019146	Freshwater Lake	MSDALCIKYGCDYQLDLDGQVTCDNCGAMGDDMPNPQPVDNSVFERQVDFE
Ga0181359_10691213	3300019784	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE
Ga0181359_11671411	3300019784	Freshwater Lake	MSDAMCTKYGCDYKLDLDGQVTCSNCGAMDDDKQPVNIFESQVDFE
Ga0211732_113685311	3300020141	Freshwater	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFETQTDFE
Ga0211732_13765743	3300020141	Freshwater	MSDAICSKYGCDYELDLDGQVTCSNCGAMDDDMPNPTNVDNLAFESQMDFE
Ga0211734_108630362	3300020159	Freshwater	MSDALCTKYGCDYKLDLDGQVTCDNCGAMGDDMPNPQSVDNSVFERQVDFE
Ga0211733_101156463	3300020160	Freshwater	MTCTKYGCNYELDLDGQVTCSVCGAMDDDMKPDIFESQIDFE
Ga0211733_105643973	3300020160	Freshwater	EKIISLKTYWIIKMTCTKYGCDYELDLDGQVTCTVCGAMDDDRQPINIFETQVDFE
Ga0211726_100720336	3300020161	Freshwater	MTCTKYGCNYELDLDGQVTCTVCGAMDDDIQPVNIFETQVDFE
Ga0211735_101116441	3300020162	Freshwater	MSDAICSKYGCDYELDLDGQVTCSNCGAMDDDMPNPTNVDNLAFESQMD
Ga0211729_100796843	3300020172	Freshwater	MTCSKYGCDYELDLDGQVTCTVCGAMDDDRQPINIFETQVDFE
Ga0211729_105286749	3300020172	Freshwater	MTCTKYGCDYELDLDGQVTCTVCGAMDDDKQPVDIFETQTDFE
Ga0211729_106147091	3300020172	Freshwater	MTHECNYELDLDGQVTCTVCGSMDDDMCRSDNKQSIFE
Ga0211729_107968506	3300020172	Freshwater	MTCTKYGCNYELDLDGQVTCTVCGAMDDDIQPVNIFETQIDFE
Ga0211729_112255082	3300020172	Freshwater	VSNEQLCNKYGCNYELDLDGQVTCSNCGGMGDDMPNPININNSAFETQVDFE
Ga0211731_105646651	3300020205	Freshwater	AICSKYGCDYELDLDGQVTCSNCGAMDDDMPNPTNVDNLAFESQMDFE
Ga0208091_10190661	3300020506	Freshwater	MTCIKAGCNYELDLDGQVTCSVCGAMDDDKQPVDIFESQIDFE
Ga0208082_100117918	3300020563	Freshwater	FFAEWYDVYMTCIKAGCNYELDLDGQVTCSVCGAMDDDKQPVDIFESQIDFE
Ga0194048_100148003	3300021519	Anoxic Zone Freshwater	MSWGILMSDAICTKYGCDYQLDLDGQVTCSNCGAMDDDMPNPQPADNSVFERQIDFE
Ga0194048_100386934	3300021519	Anoxic Zone Freshwater	MICSKYGCDYQLDLDGQVTCVNCGAMDDDKQPIDLKHFESQVDFE
Ga0194060_100097147	3300021602	Anoxic Zone Freshwater	MSDAICTKYGCDYQLDLDGQVTCSNCGAMDDDMPNPQPADNSVFERQIDFE
Ga0222713_101040103	3300021962	Estuarine Water	MTCTKYGCNYELDLDGQVTCTVCGSMDDDKEPVNIFETQMDFE
Ga0181354_10476102	3300022190	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPINIDNSVFERQIDFE
Ga0212124_104762671	3300022553	Freshwater	MCTKYGCDYQLDLDGQITCFNCGAMDDDMLPRRIYNENDKFESQVDFE
Ga0214921_100037312	3300023174	Freshwater	MTCTKYGCNYELDLDGQVTCTVCGAMDDDMSPITLNMFESQVDFE
Ga0214921_102744503	3300023174	Freshwater	MSDAMCDKYGCDYQLDLDGQVTCFNCGAMGDDMPNPRRIDNSDFERQVDFE
Ga0214919_100004885	3300023184	Freshwater	MSDAMCTKYGCDYKLDLDGQVTCSNCGAMGDDMPNPQSADNSVFERQIDFE
Ga0244777_109441853	3300024343	Estuarine	MGFKMSDAMCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE
Ga0244775_100153133	3300024346	Estuarine	MSDAMCGKYGCDYQLDLDGQVTCANCGAMDDDASTPINIDNSVFERQIDFE
Ga0244775_100188956	3300024346	Estuarine	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDIQPVDIFETQTDFE
Ga0244775_100297682	3300024346	Estuarine	MTHTCNYQLDLDGQVTCTVCGAMDDDMQSIFETQVDFE
Ga0244775_100508704	3300024346	Estuarine	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFESQVDFE
Ga0244775_101105044	3300024346	Estuarine	MTDALCSKYGCDYQLDLDGQVTCFNCGAMDDDASTPITLNMFESQVDFE
Ga0244775_101557684	3300024346	Estuarine	MSDAICTKYGCDYQLDLDGQITCANCGAMDDDMLPRRTYNDNDKFETQMDFE
Ga0244775_102475642	3300024346	Estuarine	MMSMCVKYGCDFQLDLDGQVTCVACGAMDDDKQHAWEEKPDIKNILFESQVNFE
Ga0244775_102485402	3300024346	Estuarine	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEDQVDFE
Ga0244775_102869522	3300024346	Estuarine	MSDALCTKYGCSYELDLDGQVTCSNCGAMDDDMLPRRTYNDNDKFETQMDFE
Ga0244775_103475892	3300024346	Estuarine	MTCTKYGCDFEIDLDGQVTCTVCGAMDDNKQPVDIFETQTDFE
Ga0244775_103737853	3300024346	Estuarine	YGCDYQLDLDGQVTCSNCGAMDDDMLPRRTYNENDKFESQVDFE
Ga0244775_104107952	3300024346	Estuarine	MSDAICTKYGCDYQLDLDGQVTCAICGAMDDDASTPITLDIFESQVDFE
Ga0244775_105282952	3300024346	Estuarine	MSDAICTKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE
Ga0255072_11233762	3300027508	Freshwater	MSDAMCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE
Ga0208966_10282494	3300027586	Freshwater Lentic	MSDAICSKYGCDYQLDLDGQVTCGNCGAMDDDMPNPTNVDNLAFESQMDFE
Ga0208951_1000004135	3300027621	Freshwater Lentic	MSDAICSKYGCDYQLDLDGQVTCGNCGAMDDDMPNPTNVDNLAFESQVDFE
Ga0208133_10358271	3300027631	Estuarine	YGCDYKLDLDGQVTCSNCGAMGDDMPNPQSADNSVFERQIDFE
Ga0209356_11193982	3300027644	Freshwater Lake	GCDYQLDLDGQVTCSNCGAMDDDKQPVNIFEAQVDFE
Ga0209357_10388704	3300027656	Freshwater Lake	MSDALCTKYGCDYQLDLDGQVTCSNCGAMDDDMNVNINVDNSVFETQVDFE
Ga0209357_10389481	3300027656	Freshwater Lake	WYDVYMTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE
Ga0209551_11501541	3300027689	Freshwater Lake	KSFNRTSNGGISRMSDPVCTKYGCDYQLDLDGQVTCAICGAMDDDASTPVTLDIFEKQVDFE
Ga0209551_11589792	3300027689	Freshwater Lake	YDVYMTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE
Ga0209087_10002952	3300027734	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFESQVDFE
Ga0209085_10021724	3300027741	Freshwater Lake	MTHNCTFDLDLDGQVTCTVCGAMDDDKEPNKIFEEQVDFE
Ga0208305_101307043	3300027753	Estuarine	MTCTKYGCNYELDLDGQVTCTVCGAMDDDKQPVDIFESQVDFE
Ga0209596_100308127	3300027754	Freshwater Lake	MSDALCTKYGCDYQLDLDGQITCFNCGAMDDDMLPRRTYNDNDKFETQVDFE
Ga0209296_12215482	3300027759	Freshwater Lake	MSNDQLCNKYGCNYELDLDGQVTCSNCGAMGDDMPNPTGIKNSAFETQVDFE
Ga0209500_100016446	3300027782	Freshwater Lake	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDKQPVDIFETQVDFE
Ga0209107_1000047411	3300027797	Freshwater And Sediment	MCDKYGCDYQLDLDGQVTCFNCGAMDDDMPNPRSIDNSDFERQVDFE
Ga0209550_102942252	3300027892	Freshwater Lake	MSDPVCTKYGCDYQLDLDGQVTCAICGAMDDDASTPVTLDIFEKQVDFE
Ga0209550_103611502	3300027892	Freshwater Lake	MSDPICTKYGCDYQLDLDGQVTCAICGAMDDDASTPITLDIFEKQVDFE
Ga0209550_103724611	3300027892	Freshwater Lake	MTCTKYGCDYQLDLDGKVTCTVCGAMDDDRQPVDIFETQTDFE
Ga0209550_108653101	3300027892	Freshwater Lake	MCTKYGCDYQLDLDGQVTCSNCGAMDDDKQPVNIFEAQVDFE
Ga0209400_100102164	3300027963	Freshwater Lake	MTHVCNYELDLDGQVTCTVCGAMDDDMSHSDDVDIFESQIDFE
Ga0209401_100055951	3300027971	Freshwater Lake	MKWYDVYMTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPITLDMFEAQVDFE
Ga0209298_100000392	3300027973	Freshwater Lake	MICTKYGCNYELDLDGQVTCTVCGAMDDDKQPVDIFETQTDFE
Ga0315905_103902821	3300032092	Freshwater	MTCTKYGCDYQLDLDGQVTCAVCGAMDDDASTPINIDNSVFERQI
Ga0335031_0018407_4810_4935	3300034104	Freshwater	MTCIKAGCNYELDLDGQVTCSVCGAMDDDKQSIFETQVDFE
Ga0335031_0270887_896_1021	3300034104	Freshwater	MTCIKAGCNYELDLDGQVTCAVCGAMDDDKQSIFESQIDFE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences